HEADER IMMUNE SYSTEM 30-APR-09 3H9Z TITLE CRYSTAL STRUCTURE OF THE IGE-FC3-4 DOMAINS COMPND MOL_ID: 1; COMPND 2 MOLECULE: IG EPSILON CHAIN C REGION; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: UNP RESIDUES 209-428; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: IGHE; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HI5; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: RECOMBINANT BACULOVIRUS; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PACGP67A KEYWDS IMMUNOGLOBIN, IGE, FC, FLEXIBILITY, HYDROPHOBIC POCKET, DISULFIDE KEYWDS 2 BOND, GLYCOPROTEIN, IMMUNOGLOBULIN C REGION, IMMUNOGLOBULIN DOMAIN, KEYWDS 3 IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR B.A.WURZBURG REVDAT 9 16-OCT-24 3H9Z 1 REMARK REVDAT 8 06-SEP-23 3H9Z 1 REMARK REVDAT 7 13-OCT-21 3H9Z 1 SEQADV HETSYN LINK REVDAT 6 29-JUL-20 3H9Z 1 COMPND REMARK SEQADV HETNAM REVDAT 6 2 1 LINK SITE ATOM REVDAT 5 24-JUL-19 3H9Z 1 REMARK LINK REVDAT 4 01-NOV-17 3H9Z 1 REMARK REVDAT 3 13-JUL-11 3H9Z 1 VERSN REVDAT 2 13-OCT-09 3H9Z 1 JRNL REVDAT 1 08-SEP-09 3H9Z 0 JRNL AUTH B.A.WURZBURG,T.S.JARDETZKY JRNL TITL CONFORMATIONAL FLEXIBILITY IN IMMUNOGLOBULIN E-FC 3-4 JRNL TITL 2 REVEALED IN MULTIPLE CRYSTAL FORMS. JRNL REF J.MOL.BIOL. V. 393 176 2009 JRNL REFN ISSN 0022-2836 JRNL PMID 19682998 JRNL DOI 10.1016/J.JMB.2009.08.012 REMARK 2 REMARK 2 RESOLUTION. 2.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.71 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 35946 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.232 REMARK 3 R VALUE (WORKING SET) : 0.229 REMARK 3 FREE R VALUE : 0.277 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1824 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.45 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.58 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4598 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.61 REMARK 3 BIN R VALUE (WORKING SET) : 0.3260 REMARK 3 BIN FREE R VALUE SET COUNT : 226 REMARK 3 BIN FREE R VALUE : 0.3950 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6624 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 184 REMARK 3 SOLVENT ATOMS : 146 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.78 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.57000 REMARK 3 B22 (A**2) : 0.55000 REMARK 3 B33 (A**2) : -1.06000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.21000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.619 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.315 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.227 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 20.504 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.925 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.890 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7068 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 4938 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9656 ; 1.448 ; 1.988 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11882 ; 0.746 ; 3.003 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 832 ; 6.204 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 300 ;28.000 ;22.267 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1132 ;14.975 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 72 ;15.758 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1132 ; 0.083 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7608 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1412 ; 0.000 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4208 ; 1.522 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1640 ; 0.277 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6888 ; 2.569 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2860 ; 1.396 ; 2.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2768 ; 2.179 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 336 A 433 REMARK 3 ORIGIN FOR THE GROUP (A): 96.9456 -27.8232 37.2487 REMARK 3 T TENSOR REMARK 3 T11: -0.0405 T22: 0.0159 REMARK 3 T33: -0.1348 T12: 0.0374 REMARK 3 T13: 0.0935 T23: -0.0404 REMARK 3 L TENSOR REMARK 3 L11: 3.0575 L22: 2.8460 REMARK 3 L33: 2.6998 L12: -0.7251 REMARK 3 L13: -0.2046 L23: 0.6904 REMARK 3 S TENSOR REMARK 3 S11: -0.1752 S12: -0.0624 S13: -0.2688 REMARK 3 S21: 0.1915 S22: 0.1741 S23: 0.1054 REMARK 3 S31: 0.4011 S32: 0.1980 S33: 0.0011 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 434 A 440 REMARK 3 ORIGIN FOR THE GROUP (A): 100.3596 -9.0196 44.5183 REMARK 3 T TENSOR REMARK 3 T11: 0.0387 T22: 0.1000 REMARK 3 T33: 0.0461 T12: 0.0123 REMARK 3 T13: 0.0094 T23: -0.0405 REMARK 3 L TENSOR REMARK 3 L11: 5.4757 L22: 13.9244 REMARK 3 L33: 1.1723 L12: 8.7319 REMARK 3 L13: 2.5336 L23: 4.0403 REMARK 3 S TENSOR REMARK 3 S11: -0.1935 S12: 0.0542 S13: 0.3992 REMARK 3 S21: 0.0927 S22: 0.3065 S23: 0.4637 REMARK 3 S31: 0.1902 S32: 0.0720 S33: -0.1129 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 441 A 544 REMARK 3 ORIGIN FOR THE GROUP (A): 119.1932 -11.9530 28.9467 REMARK 3 T TENSOR REMARK 3 T11: -0.0811 T22: -0.1157 REMARK 3 T33: -0.0342 T12: 0.0084 REMARK 3 T13: -0.0146 T23: 0.0156 REMARK 3 L TENSOR REMARK 3 L11: 4.4341 L22: 1.9615 REMARK 3 L33: 3.7722 L12: -0.5680 REMARK 3 L13: -1.8602 L23: 0.5778 REMARK 3 S TENSOR REMARK 3 S11: -0.0133 S12: 0.0719 S13: 0.1589 REMARK 3 S21: 0.0967 S22: -0.0019 S23: 0.0467 REMARK 3 S31: -0.0552 S32: -0.0272 S33: 0.0151 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 5 REMARK 3 RESIDUE RANGE : B 336 B 433 REMARK 3 ORIGIN FOR THE GROUP (A): 124.6938 -37.5912 56.0347 REMARK 3 T TENSOR REMARK 3 T11: -0.0438 T22: -0.0717 REMARK 3 T33: -0.0199 T12: -0.0211 REMARK 3 T13: 0.0147 T23: -0.0428 REMARK 3 L TENSOR REMARK 3 L11: 2.6196 L22: 3.5508 REMARK 3 L33: 2.9987 L12: -0.7004 REMARK 3 L13: 0.1044 L23: 0.0418 REMARK 3 S TENSOR REMARK 3 S11: -0.0875 S12: -0.0439 S13: -0.1615 REMARK 3 S21: 0.2282 S22: -0.0976 S23: 0.4252 REMARK 3 S31: 0.0040 S32: -0.3718 S33: 0.1851 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 434 B 440 REMARK 3 ORIGIN FOR THE GROUP (A): 133.8125 -37.9592 37.7339 REMARK 3 T TENSOR REMARK 3 T11: 0.0442 T22: 0.0062 REMARK 3 T33: -0.0075 T12: 0.0028 REMARK 3 T13: -0.0088 T23: -0.0096 REMARK 3 L TENSOR REMARK 3 L11: 1.7615 L22: 2.3016 REMARK 3 L33: 15.0623 L12: 1.4751 REMARK 3 L13: -4.8330 L23: -5.4334 REMARK 3 S TENSOR REMARK 3 S11: 0.0246 S12: -0.0439 S13: 0.0291 REMARK 3 S21: -0.1267 S22: -0.1971 S23: -0.1612 REMARK 3 S31: 0.0442 S32: -0.0526 S33: 0.1725 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 441 B 544 REMARK 3 ORIGIN FOR THE GROUP (A): 131.6502 -13.8489 40.4927 REMARK 3 T TENSOR REMARK 3 T11: -0.0446 T22: -0.0095 REMARK 3 T33: -0.0563 T12: 0.0193 REMARK 3 T13: -0.0231 T23: 0.0073 REMARK 3 L TENSOR REMARK 3 L11: 1.4176 L22: 2.9904 REMARK 3 L33: 1.9439 L12: -0.8035 REMARK 3 L13: 0.3924 L23: 0.2762 REMARK 3 S TENSOR REMARK 3 S11: -0.0217 S12: -0.0715 S13: 0.1227 REMARK 3 S21: -0.0434 S22: 0.0251 S23: -0.1378 REMARK 3 S31: -0.1572 S32: -0.0301 S33: -0.0034 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 5 REMARK 3 RESIDUE RANGE : C 336 C 433 REMARK 3 ORIGIN FOR THE GROUP (A): 69.4723 -31.7178 1.5571 REMARK 3 T TENSOR REMARK 3 T11: -0.0352 T22: -0.0406 REMARK 3 T33: -0.0788 T12: 0.0375 REMARK 3 T13: 0.1293 T23: -0.0013 REMARK 3 L TENSOR REMARK 3 L11: 3.5066 L22: 2.7701 REMARK 3 L33: 4.1099 L12: 0.2401 REMARK 3 L13: 0.8086 L23: 1.4518 REMARK 3 S TENSOR REMARK 3 S11: -0.0879 S12: -0.0498 S13: -0.3249 REMARK 3 S21: 0.5032 S22: 0.0767 S23: 0.0386 REMARK 3 S31: 0.5953 S32: 0.0764 S33: 0.0112 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 434 C 440 REMARK 3 ORIGIN FOR THE GROUP (A): 75.2368 -13.2074 7.6054 REMARK 3 T TENSOR REMARK 3 T11: -0.0273 T22: 0.0071 REMARK 3 T33: 0.0078 T12: 0.0274 REMARK 3 T13: 0.0083 T23: -0.0068 REMARK 3 L TENSOR REMARK 3 L11: 8.5971 L22: 12.4546 REMARK 3 L33: 1.1112 L12: 10.2035 REMARK 3 L13: 0.1833 L23: 0.8353 REMARK 3 S TENSOR REMARK 3 S11: -0.1806 S12: -0.2979 S13: 0.4920 REMARK 3 S21: 0.1406 S22: 0.0682 S23: 0.3529 REMARK 3 S31: -0.0949 S32: -0.1113 S33: 0.1124 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 441 C 544 REMARK 3 ORIGIN FOR THE GROUP (A): 92.0721 -18.0068 -9.6999 REMARK 3 T TENSOR REMARK 3 T11: -0.0479 T22: -0.0701 REMARK 3 T33: -0.0438 T12: 0.0079 REMARK 3 T13: -0.0055 T23: -0.0193 REMARK 3 L TENSOR REMARK 3 L11: 2.2042 L22: 1.4926 REMARK 3 L33: 3.3348 L12: -0.6383 REMARK 3 L13: -0.6023 L23: 0.5143 REMARK 3 S TENSOR REMARK 3 S11: 0.0490 S12: -0.0327 S13: -0.0044 REMARK 3 S21: 0.0331 S22: -0.0087 S23: -0.0037 REMARK 3 S31: 0.1422 S32: 0.0699 S33: -0.0403 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1 D 5 REMARK 3 RESIDUE RANGE : D 336 D 433 REMARK 3 ORIGIN FOR THE GROUP (A): 98.1810 -41.7957 17.2143 REMARK 3 T TENSOR REMARK 3 T11: -0.0125 T22: -0.0910 REMARK 3 T33: -0.0398 T12: 0.0357 REMARK 3 T13: -0.0414 T23: -0.1012 REMARK 3 L TENSOR REMARK 3 L11: 2.2319 L22: 3.8634 REMARK 3 L33: 2.6445 L12: -0.0621 REMARK 3 L13: -0.0466 L23: 0.4082 REMARK 3 S TENSOR REMARK 3 S11: -0.0668 S12: -0.1820 S13: -0.0275 REMARK 3 S21: -0.0377 S22: -0.2324 S23: 0.5213 REMARK 3 S31: -0.0325 S32: -0.2659 S33: 0.2991 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 434 D 440 REMARK 3 ORIGIN FOR THE GROUP (A): 107.4463 -44.1270 -0.8667 REMARK 3 T TENSOR REMARK 3 T11: 0.1310 T22: 0.0181 REMARK 3 T33: 0.0389 T12: 0.0210 REMARK 3 T13: 0.0125 T23: 0.0153 REMARK 3 L TENSOR REMARK 3 L11: 5.5035 L22: 1.0005 REMARK 3 L33: 13.8168 L12: 2.3465 REMARK 3 L13: -8.7201 L23: -3.7180 REMARK 3 S TENSOR REMARK 3 S11: -0.0058 S12: -0.1523 S13: 0.3085 REMARK 3 S21: -0.1001 S22: -0.0430 S23: 0.0112 REMARK 3 S31: 0.1096 S32: -0.2788 S33: 0.0488 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 441 D 544 REMARK 3 ORIGIN FOR THE GROUP (A): 105.2765 -19.6607 1.1523 REMARK 3 T TENSOR REMARK 3 T11: -0.0653 T22: -0.0631 REMARK 3 T33: -0.1255 T12: 0.0207 REMARK 3 T13: 0.0049 T23: 0.0110 REMARK 3 L TENSOR REMARK 3 L11: 1.7380 L22: 4.0932 REMARK 3 L33: 2.3782 L12: -0.6611 REMARK 3 L13: 0.5395 L23: 0.7328 REMARK 3 S TENSOR REMARK 3 S11: -0.0197 S12: -0.0220 S13: 0.0718 REMARK 3 S21: -0.0855 S22: -0.0514 S23: 0.0687 REMARK 3 S31: -0.0542 S32: 0.1134 S33: 0.0711 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3H9Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-MAY-09. REMARK 100 THE DEPOSITION ID IS D_1000052878. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-AUG-99 REMARK 200 TEMPERATURE (KELVIN) : 113.0 REMARK 200 PH : 5.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 5ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0001 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 130 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36017 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.450 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 3.630 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05900 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 18.4250 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 82.3 REMARK 200 DATA REDUNDANCY IN SHELL : 2.28 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.24100 REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 1FP5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1 MICROLITER OF PROTEIN AT 10 MG/ML IN REMARK 280 20 MM SODIUM CHLORIDE WAS ADDED TO 1 MICROLITER OF WELL SOLUTION REMARK 280 (100 MM AMMONIUM ACETATE, 100 MM SODIUM ACETATE PH 4.6, 30% (W/V) REMARK 280 PEG 4000) AND MIXED BY PIPETTING., VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K, PH 5.3 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 49.67600 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL UNIT IS A DIMER. THE ASYMMETRIC UNIT REMARK 300 CONTAINS 2 DIMERS (CHAINS A:B AND CHAINS C:D). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2590 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22160 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.1 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2520 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.9 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, F, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 325 REMARK 465 ASP A 326 REMARK 465 PRO A 327 REMARK 465 CYS A 328 REMARK 465 ALA A 329 REMARK 465 ASP A 330 REMARK 465 SER A 331 REMARK 465 ASN A 332 REMARK 465 PRO A 333 REMARK 465 ARG A 334 REMARK 465 GLY A 335 REMARK 465 PRO A 545 REMARK 465 GLY A 546 REMARK 465 LYS A 547 REMARK 465 ALA B 325 REMARK 465 ASP B 326 REMARK 465 PRO B 327 REMARK 465 CYS B 328 REMARK 465 ALA B 329 REMARK 465 ASP B 330 REMARK 465 SER B 331 REMARK 465 ASN B 332 REMARK 465 PRO B 333 REMARK 465 ARG B 334 REMARK 465 GLY B 335 REMARK 465 PRO B 545 REMARK 465 GLY B 546 REMARK 465 LYS B 547 REMARK 465 ALA C 325 REMARK 465 ASP C 326 REMARK 465 PRO C 327 REMARK 465 CYS C 328 REMARK 465 ALA C 329 REMARK 465 ASP C 330 REMARK 465 SER C 331 REMARK 465 ASN C 332 REMARK 465 PRO C 333 REMARK 465 ARG C 334 REMARK 465 GLY C 335 REMARK 465 PRO C 545 REMARK 465 GLY C 546 REMARK 465 LYS C 547 REMARK 465 ALA D 325 REMARK 465 ASP D 326 REMARK 465 PRO D 327 REMARK 465 CYS D 328 REMARK 465 ALA D 329 REMARK 465 ASP D 330 REMARK 465 SER D 331 REMARK 465 ASN D 332 REMARK 465 PRO D 333 REMARK 465 ARG D 334 REMARK 465 GLY D 335 REMARK 465 PRO D 545 REMARK 465 GLY D 546 REMARK 465 LYS D 547 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 376 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 350 -60.07 -91.27 REMARK 500 PRO A 365 95.21 -56.31 REMARK 500 HIS A 424 55.41 -96.77 REMARK 500 PRO A 471 -175.30 -67.45 REMARK 500 GLU A 482 18.57 55.54 REMARK 500 LYS A 519 116.00 -175.27 REMARK 500 GLU A 521 119.92 -161.10 REMARK 500 ASP B 362 43.88 74.04 REMARK 500 LEU B 363 68.02 -103.83 REMARK 500 LYS B 367 63.88 -160.60 REMARK 500 THR B 369 52.69 -176.93 REMARK 500 ARG B 393 29.36 -78.50 REMARK 500 HIS B 424 37.14 -91.91 REMARK 500 SER B 456 53.03 -157.56 REMARK 500 LYS B 519 111.02 -162.28 REMARK 500 ILE C 350 -62.94 -97.31 REMARK 500 LYS C 367 85.76 -49.02 REMARK 500 LEU C 425 142.98 -170.27 REMARK 500 PRO C 471 -168.12 -72.13 REMARK 500 HIS D 424 28.38 -79.58 REMARK 500 SER D 437 -165.24 -105.51 REMARK 500 PRO D 471 -168.21 -70.22 REMARK 500 GLN D 535 49.16 35.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1FP5 RELATED DB: PDB REMARK 900 THE 'WILD-TYPE CARBOHYDRATE' FORM OF THE SAME PROTEIN (HAS WILD- REMARK 900 TYPE N371 AND N383). REMARK 900 RELATED ID: 1F6A RELATED DB: PDB REMARK 900 THE 'WILD-TYPE CARBOHYDRATE' FORM OF THE SAME PROTEIN IN COMPLEX REMARK 900 WITH THE ALPHA CHAIN OF THE IGE-FCRI. REMARK 900 RELATED ID: 1O0V RELATED DB: PDB REMARK 900 THE STRUCTURE OF THE IGE-FC DOMAINS 2-4. REMARK 900 RELATED ID: 3H9Y RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE IGE-FC3-4 DOMAINS, CRYSTAL FORM 1 REMARK 900 RELATED ID: 3HA0 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE IGE-FC3-4 DOMAINS, CRYSTAL FORM 3 DBREF 3H9Z A 328 547 UNP P01854 IGHE_HUMAN 209 428 DBREF 3H9Z B 328 547 UNP P01854 IGHE_HUMAN 209 428 DBREF 3H9Z C 328 547 UNP P01854 IGHE_HUMAN 209 428 DBREF 3H9Z D 328 547 UNP P01854 IGHE_HUMAN 209 428 SEQADV 3H9Z ALA A 325 UNP P01854 EXPRESSION TAG SEQADV 3H9Z ASP A 326 UNP P01854 EXPRESSION TAG SEQADV 3H9Z PRO A 327 UNP P01854 EXPRESSION TAG SEQADV 3H9Z GLN A 371 UNP P01854 ASN 252 ENGINEERED MUTATION SEQADV 3H9Z GLN A 383 UNP P01854 ASN 264 ENGINEERED MUTATION SEQADV 3H9Z ALA B 325 UNP P01854 EXPRESSION TAG SEQADV 3H9Z ASP B 326 UNP P01854 EXPRESSION TAG SEQADV 3H9Z PRO B 327 UNP P01854 EXPRESSION TAG SEQADV 3H9Z GLN B 371 UNP P01854 ASN 252 ENGINEERED MUTATION SEQADV 3H9Z GLN B 383 UNP P01854 ASN 264 ENGINEERED MUTATION SEQADV 3H9Z ALA C 325 UNP P01854 EXPRESSION TAG SEQADV 3H9Z ASP C 326 UNP P01854 EXPRESSION TAG SEQADV 3H9Z PRO C 327 UNP P01854 EXPRESSION TAG SEQADV 3H9Z GLN C 371 UNP P01854 ASN 252 ENGINEERED MUTATION SEQADV 3H9Z GLN C 383 UNP P01854 ASN 264 ENGINEERED MUTATION SEQADV 3H9Z ALA D 325 UNP P01854 EXPRESSION TAG SEQADV 3H9Z ASP D 326 UNP P01854 EXPRESSION TAG SEQADV 3H9Z PRO D 327 UNP P01854 EXPRESSION TAG SEQADV 3H9Z GLN D 371 UNP P01854 ASN 252 ENGINEERED MUTATION SEQADV 3H9Z GLN D 383 UNP P01854 ASN 264 ENGINEERED MUTATION SEQRES 1 A 223 ALA ASP PRO CYS ALA ASP SER ASN PRO ARG GLY VAL SER SEQRES 2 A 223 ALA TYR LEU SER ARG PRO SER PRO PHE ASP LEU PHE ILE SEQRES 3 A 223 ARG LYS SER PRO THR ILE THR CYS LEU VAL VAL ASP LEU SEQRES 4 A 223 ALA PRO SER LYS GLY THR VAL GLN LEU THR TRP SER ARG SEQRES 5 A 223 ALA SER GLY LYS PRO VAL GLN HIS SER THR ARG LYS GLU SEQRES 6 A 223 GLU LYS GLN ARG ASN GLY THR LEU THR VAL THR SER THR SEQRES 7 A 223 LEU PRO VAL GLY THR ARG ASP TRP ILE GLU GLY GLU THR SEQRES 8 A 223 TYR GLN CYS ARG VAL THR HIS PRO HIS LEU PRO ARG ALA SEQRES 9 A 223 LEU MET ARG SER THR THR LYS THR SER GLY PRO ARG ALA SEQRES 10 A 223 ALA PRO GLU VAL TYR ALA PHE ALA THR PRO GLU TRP PRO SEQRES 11 A 223 GLY SER ARG ASP LYS ARG THR LEU ALA CYS LEU ILE GLN SEQRES 12 A 223 ASN PHE MET PRO GLU ASP ILE SER VAL GLN TRP LEU HIS SEQRES 13 A 223 ASN GLU VAL GLN LEU PRO ASP ALA ARG HIS SER THR THR SEQRES 14 A 223 GLN PRO ARG LYS THR LYS GLY SER GLY PHE PHE VAL PHE SEQRES 15 A 223 SER ARG LEU GLU VAL THR ARG ALA GLU TRP GLU GLN LYS SEQRES 16 A 223 ASP GLU PHE ILE CYS ARG ALA VAL HIS GLU ALA ALA SER SEQRES 17 A 223 PRO SER GLN THR VAL GLN ARG ALA VAL SER VAL ASN PRO SEQRES 18 A 223 GLY LYS SEQRES 1 B 223 ALA ASP PRO CYS ALA ASP SER ASN PRO ARG GLY VAL SER SEQRES 2 B 223 ALA TYR LEU SER ARG PRO SER PRO PHE ASP LEU PHE ILE SEQRES 3 B 223 ARG LYS SER PRO THR ILE THR CYS LEU VAL VAL ASP LEU SEQRES 4 B 223 ALA PRO SER LYS GLY THR VAL GLN LEU THR TRP SER ARG SEQRES 5 B 223 ALA SER GLY LYS PRO VAL GLN HIS SER THR ARG LYS GLU SEQRES 6 B 223 GLU LYS GLN ARG ASN GLY THR LEU THR VAL THR SER THR SEQRES 7 B 223 LEU PRO VAL GLY THR ARG ASP TRP ILE GLU GLY GLU THR SEQRES 8 B 223 TYR GLN CYS ARG VAL THR HIS PRO HIS LEU PRO ARG ALA SEQRES 9 B 223 LEU MET ARG SER THR THR LYS THR SER GLY PRO ARG ALA SEQRES 10 B 223 ALA PRO GLU VAL TYR ALA PHE ALA THR PRO GLU TRP PRO SEQRES 11 B 223 GLY SER ARG ASP LYS ARG THR LEU ALA CYS LEU ILE GLN SEQRES 12 B 223 ASN PHE MET PRO GLU ASP ILE SER VAL GLN TRP LEU HIS SEQRES 13 B 223 ASN GLU VAL GLN LEU PRO ASP ALA ARG HIS SER THR THR SEQRES 14 B 223 GLN PRO ARG LYS THR LYS GLY SER GLY PHE PHE VAL PHE SEQRES 15 B 223 SER ARG LEU GLU VAL THR ARG ALA GLU TRP GLU GLN LYS SEQRES 16 B 223 ASP GLU PHE ILE CYS ARG ALA VAL HIS GLU ALA ALA SER SEQRES 17 B 223 PRO SER GLN THR VAL GLN ARG ALA VAL SER VAL ASN PRO SEQRES 18 B 223 GLY LYS SEQRES 1 C 223 ALA ASP PRO CYS ALA ASP SER ASN PRO ARG GLY VAL SER SEQRES 2 C 223 ALA TYR LEU SER ARG PRO SER PRO PHE ASP LEU PHE ILE SEQRES 3 C 223 ARG LYS SER PRO THR ILE THR CYS LEU VAL VAL ASP LEU SEQRES 4 C 223 ALA PRO SER LYS GLY THR VAL GLN LEU THR TRP SER ARG SEQRES 5 C 223 ALA SER GLY LYS PRO VAL GLN HIS SER THR ARG LYS GLU SEQRES 6 C 223 GLU LYS GLN ARG ASN GLY THR LEU THR VAL THR SER THR SEQRES 7 C 223 LEU PRO VAL GLY THR ARG ASP TRP ILE GLU GLY GLU THR SEQRES 8 C 223 TYR GLN CYS ARG VAL THR HIS PRO HIS LEU PRO ARG ALA SEQRES 9 C 223 LEU MET ARG SER THR THR LYS THR SER GLY PRO ARG ALA SEQRES 10 C 223 ALA PRO GLU VAL TYR ALA PHE ALA THR PRO GLU TRP PRO SEQRES 11 C 223 GLY SER ARG ASP LYS ARG THR LEU ALA CYS LEU ILE GLN SEQRES 12 C 223 ASN PHE MET PRO GLU ASP ILE SER VAL GLN TRP LEU HIS SEQRES 13 C 223 ASN GLU VAL GLN LEU PRO ASP ALA ARG HIS SER THR THR SEQRES 14 C 223 GLN PRO ARG LYS THR LYS GLY SER GLY PHE PHE VAL PHE SEQRES 15 C 223 SER ARG LEU GLU VAL THR ARG ALA GLU TRP GLU GLN LYS SEQRES 16 C 223 ASP GLU PHE ILE CYS ARG ALA VAL HIS GLU ALA ALA SER SEQRES 17 C 223 PRO SER GLN THR VAL GLN ARG ALA VAL SER VAL ASN PRO SEQRES 18 C 223 GLY LYS SEQRES 1 D 223 ALA ASP PRO CYS ALA ASP SER ASN PRO ARG GLY VAL SER SEQRES 2 D 223 ALA TYR LEU SER ARG PRO SER PRO PHE ASP LEU PHE ILE SEQRES 3 D 223 ARG LYS SER PRO THR ILE THR CYS LEU VAL VAL ASP LEU SEQRES 4 D 223 ALA PRO SER LYS GLY THR VAL GLN LEU THR TRP SER ARG SEQRES 5 D 223 ALA SER GLY LYS PRO VAL GLN HIS SER THR ARG LYS GLU SEQRES 6 D 223 GLU LYS GLN ARG ASN GLY THR LEU THR VAL THR SER THR SEQRES 7 D 223 LEU PRO VAL GLY THR ARG ASP TRP ILE GLU GLY GLU THR SEQRES 8 D 223 TYR GLN CYS ARG VAL THR HIS PRO HIS LEU PRO ARG ALA SEQRES 9 D 223 LEU MET ARG SER THR THR LYS THR SER GLY PRO ARG ALA SEQRES 10 D 223 ALA PRO GLU VAL TYR ALA PHE ALA THR PRO GLU TRP PRO SEQRES 11 D 223 GLY SER ARG ASP LYS ARG THR LEU ALA CYS LEU ILE GLN SEQRES 12 D 223 ASN PHE MET PRO GLU ASP ILE SER VAL GLN TRP LEU HIS SEQRES 13 D 223 ASN GLU VAL GLN LEU PRO ASP ALA ARG HIS SER THR THR SEQRES 14 D 223 GLN PRO ARG LYS THR LYS GLY SER GLY PHE PHE VAL PHE SEQRES 15 D 223 SER ARG LEU GLU VAL THR ARG ALA GLU TRP GLU GLN LYS SEQRES 16 D 223 ASP GLU PHE ILE CYS ARG ALA VAL HIS GLU ALA ALA SER SEQRES 17 D 223 PRO SER GLN THR VAL GLN ARG ALA VAL SER VAL ASN PRO SEQRES 18 D 223 GLY LYS MODRES 3H9Z ASN B 394 ASN GLYCOSYLATION SITE MODRES 3H9Z ASN C 394 ASN GLYCOSYLATION SITE MODRES 3H9Z ASN D 394 ASN GLYCOSYLATION SITE HET NAG E 1 14 HET NAG E 2 14 HET BMA E 3 11 HET MAN E 4 11 HET MAN E 5 11 HET NAG F 1 14 HET NAG F 2 14 HET BMA F 3 11 HET MAN F 4 11 HET MAN F 5 11 HET NAG G 1 14 HET NAG G 2 14 HET BMA G 3 11 HET MAN G 4 11 HET MAN G 5 11 HET NH4 C 548 1 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM NH4 AMMONIUM ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 5 NAG 6(C8 H15 N O6) FORMUL 5 BMA 3(C6 H12 O6) FORMUL 5 MAN 6(C6 H12 O6) FORMUL 8 NH4 H4 N 1+ FORMUL 9 HOH *146(H2 O) HELIX 1 1 SER A 344 ILE A 350 1 7 HELIX 2 2 GLY A 406 GLU A 412 1 7 HELIX 3 3 PRO A 486 ALA A 488 5 3 HELIX 4 4 ARG A 513 LYS A 519 1 7 HELIX 5 5 SER B 344 ILE B 350 1 7 HELIX 6 6 GLY B 406 GLU B 412 1 7 HELIX 7 7 PRO B 486 ALA B 488 5 3 HELIX 8 8 ARG B 513 LYS B 519 1 7 HELIX 9 9 SER C 344 ILE C 350 1 7 HELIX 10 10 GLY C 406 GLY C 413 1 8 HELIX 11 11 PRO C 486 ALA C 488 5 3 HELIX 12 12 ARG C 513 LYS C 519 1 7 HELIX 13 13 SER D 344 ILE D 350 1 7 HELIX 14 14 GLY D 406 GLU D 412 1 7 HELIX 15 15 PRO D 486 ALA D 488 5 3 HELIX 16 16 ARG D 513 LYS D 519 1 7 SHEET 1 A 8 SER A 337 SER A 341 0 SHEET 2 A 8 THR A 355 ASP A 362 -1 O LEU A 359 N TYR A 339 SHEET 3 A 8 LEU A 397 PRO A 404 -1 O SER A 401 N CYS A 358 SHEET 4 A 8 THR A 386 LYS A 391 -1 N THR A 386 O THR A 402 SHEET 5 A 8 THR D 386 LYS D 391 -1 O GLU D 389 N ARG A 387 SHEET 6 A 8 LEU D 397 PRO D 404 -1 O THR D 402 N THR D 386 SHEET 7 A 8 THR D 355 ASP D 362 -1 N VAL D 360 O VAL D 399 SHEET 8 A 8 SER D 337 SER D 341 -1 N TYR D 339 O LEU D 359 SHEET 1 B 3 GLN A 371 ARG A 376 0 SHEET 2 B 3 TYR A 416 THR A 421 -1 O ARG A 419 N THR A 373 SHEET 3 B 3 LEU A 429 THR A 433 -1 O ARG A 431 N CYS A 418 SHEET 1 C 4 GLU A 444 ALA A 449 0 SHEET 2 C 4 LYS A 459 PHE A 469 -1 O LEU A 465 N TYR A 446 SHEET 3 C 4 PHE A 503 THR A 512 -1 O LEU A 509 N LEU A 462 SHEET 4 C 4 HIS A 490 THR A 492 -1 N SER A 491 O ARG A 508 SHEET 1 D 4 GLU A 444 ALA A 449 0 SHEET 2 D 4 LYS A 459 PHE A 469 -1 O LEU A 465 N TYR A 446 SHEET 3 D 4 PHE A 503 THR A 512 -1 O LEU A 509 N LEU A 462 SHEET 4 D 4 ARG A 496 LYS A 497 -1 N ARG A 496 O PHE A 504 SHEET 1 E 4 VAL A 483 GLN A 484 0 SHEET 2 E 4 SER A 475 HIS A 480 -1 N HIS A 480 O VAL A 483 SHEET 3 E 4 PHE A 522 VAL A 527 -1 O VAL A 527 N SER A 475 SHEET 4 E 4 THR A 536 VAL A 541 -1 O VAL A 537 N ALA A 526 SHEET 1 F 4 SER B 337 LEU B 340 0 SHEET 2 F 4 THR B 355 VAL B 361 -1 O LEU B 359 N TYR B 339 SHEET 3 F 4 LEU B 397 PRO B 404 -1 O LEU B 403 N ILE B 356 SHEET 4 F 4 THR B 386 LYS B 391 -1 N LYS B 388 O THR B 400 SHEET 1 G 3 GLN B 371 ARG B 376 0 SHEET 2 G 3 TYR B 416 THR B 421 -1 O ARG B 419 N THR B 373 SHEET 3 G 3 LEU B 429 THR B 433 -1 O LEU B 429 N VAL B 420 SHEET 1 H 4 GLU B 444 ALA B 449 0 SHEET 2 H 4 LYS B 459 PHE B 469 -1 O ALA B 463 N PHE B 448 SHEET 3 H 4 PHE B 503 THR B 512 -1 O LEU B 509 N LEU B 462 SHEET 4 H 4 HIS B 490 THR B 492 -1 N SER B 491 O ARG B 508 SHEET 1 I 4 GLU B 444 ALA B 449 0 SHEET 2 I 4 LYS B 459 PHE B 469 -1 O ALA B 463 N PHE B 448 SHEET 3 I 4 PHE B 503 THR B 512 -1 O LEU B 509 N LEU B 462 SHEET 4 I 4 ARG B 496 LYS B 497 -1 N ARG B 496 O PHE B 504 SHEET 1 J 4 VAL B 483 GLN B 484 0 SHEET 2 J 4 SER B 475 HIS B 480 -1 N HIS B 480 O VAL B 483 SHEET 3 J 4 PHE B 522 VAL B 527 -1 O ARG B 525 N GLN B 477 SHEET 4 J 4 THR B 536 VAL B 541 -1 O VAL B 541 N PHE B 522 SHEET 1 K 4 SER C 337 LEU C 340 0 SHEET 2 K 4 THR C 355 ASP C 362 -1 O LEU C 359 N TYR C 339 SHEET 3 K 4 LEU C 397 PRO C 404 -1 O VAL C 399 N VAL C 360 SHEET 4 K 4 THR C 386 LYS C 391 -1 N LYS C 388 O THR C 400 SHEET 1 L 3 GLN C 371 ARG C 376 0 SHEET 2 L 3 THR C 415 THR C 421 -1 O THR C 421 N GLN C 371 SHEET 3 L 3 LEU C 429 THR C 434 -1 O LEU C 429 N VAL C 420 SHEET 1 M 4 GLU C 444 ALA C 449 0 SHEET 2 M 4 LYS C 459 PHE C 469 -1 O ALA C 463 N PHE C 448 SHEET 3 M 4 PHE C 503 THR C 512 -1 O VAL C 505 N ILE C 466 SHEET 4 M 4 HIS C 490 THR C 492 -1 N SER C 491 O ARG C 508 SHEET 1 N 4 GLU C 444 ALA C 449 0 SHEET 2 N 4 LYS C 459 PHE C 469 -1 O ALA C 463 N PHE C 448 SHEET 3 N 4 PHE C 503 THR C 512 -1 O VAL C 505 N ILE C 466 SHEET 4 N 4 ARG C 496 LYS C 497 -1 N ARG C 496 O PHE C 504 SHEET 1 O 4 VAL C 483 GLN C 484 0 SHEET 2 O 4 SER C 475 HIS C 480 -1 N HIS C 480 O VAL C 483 SHEET 3 O 4 PHE C 522 VAL C 527 -1 O ARG C 525 N GLN C 477 SHEET 4 O 4 THR C 536 VAL C 541 -1 O VAL C 537 N ALA C 526 SHEET 1 P 3 GLN D 371 ARG D 376 0 SHEET 2 P 3 TYR D 416 THR D 421 -1 O ARG D 419 N THR D 373 SHEET 3 P 3 LEU D 429 THR D 433 -1 O LEU D 429 N VAL D 420 SHEET 1 Q 4 GLU D 444 ALA D 449 0 SHEET 2 Q 4 LYS D 459 PHE D 469 -1 O ALA D 463 N PHE D 448 SHEET 3 Q 4 PHE D 503 THR D 512 -1 O LEU D 509 N LEU D 462 SHEET 4 Q 4 HIS D 490 THR D 492 -1 N SER D 491 O ARG D 508 SHEET 1 R 4 GLU D 444 ALA D 449 0 SHEET 2 R 4 LYS D 459 PHE D 469 -1 O ALA D 463 N PHE D 448 SHEET 3 R 4 PHE D 503 THR D 512 -1 O LEU D 509 N LEU D 462 SHEET 4 R 4 ARG D 496 LYS D 497 -1 N ARG D 496 O PHE D 504 SHEET 1 S 4 VAL D 483 GLN D 484 0 SHEET 2 S 4 SER D 475 HIS D 480 -1 N HIS D 480 O VAL D 483 SHEET 3 S 4 PHE D 522 VAL D 527 -1 O ARG D 525 N GLN D 477 SHEET 4 S 4 THR D 536 VAL D 541 -1 O VAL D 537 N ALA D 526 SSBOND 1 CYS A 358 CYS A 418 1555 1555 2.04 SSBOND 2 CYS A 464 CYS A 524 1555 1555 2.06 SSBOND 3 CYS B 358 CYS B 418 1555 1555 2.04 SSBOND 4 CYS B 464 CYS B 524 1555 1555 2.06 SSBOND 5 CYS C 358 CYS C 418 1555 1555 2.05 SSBOND 6 CYS C 464 CYS C 524 1555 1555 2.05 SSBOND 7 CYS D 358 CYS D 418 1555 1555 2.04 SSBOND 8 CYS D 464 CYS D 524 1555 1555 2.07 LINK ND2 ASN B 394 C1 NAG E 1 1555 1555 1.45 LINK ND2 ASN C 394 C1 NAG F 1 1555 1555 1.45 LINK ND2 ASN D 394 C1 NAG G 1 1555 1555 1.45 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.43 LINK O4 NAG E 2 C1 BMA E 3 1555 1555 1.44 LINK O3 BMA E 3 C1 MAN E 4 1555 1555 1.44 LINK O6 BMA E 3 C1 MAN E 5 1555 1555 1.45 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.44 LINK O4 NAG F 2 C1 BMA F 3 1555 1555 1.45 LINK O3 BMA F 3 C1 MAN F 4 1555 1555 1.44 LINK O6 BMA F 3 C1 MAN F 5 1555 1555 1.44 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.44 LINK O4 NAG G 2 C1 BMA G 3 1555 1555 1.44 LINK O3 BMA G 3 C1 MAN G 4 1555 1555 1.45 LINK O6 BMA G 3 C1 MAN G 5 1555 1555 1.45 CISPEP 1 MET A 470 PRO A 471 0 -5.58 CISPEP 2 SER A 532 PRO A 533 0 6.13 CISPEP 3 MET B 470 PRO B 471 0 -1.45 CISPEP 4 SER B 532 PRO B 533 0 -11.34 CISPEP 5 MET C 470 PRO C 471 0 -0.63 CISPEP 6 SER C 532 PRO C 533 0 0.73 CISPEP 7 MET D 470 PRO D 471 0 -2.50 CISPEP 8 SER D 532 PRO D 533 0 -6.64 CRYST1 65.660 99.352 77.639 90.00 97.40 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015230 0.000000 0.001978 0.00000 SCALE2 0.000000 0.010065 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012988 0.00000