HEADER OXIDOREDUCTASE 06-MAY-09 3HCH TITLE STRUCTURE OF THE C-TERMINAL DOMAIN (MSRB) OF NEISSERIA MENINGITIDIS TITLE 2 PILB (COMPLEX WITH SUBSTRATE) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDE METHIONINE SULFOXIDE REDUCTASE MSRA/MSRB; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: MSRB DOMAIN (UNP RESIDUES 377-522); COMPND 5 SYNONYM: PEPTIDE-METHIONINE (R)-S-OXIDE REDUCTASE; COMPND 6 EC: 1.8.4.12; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NEISSERIA MENINGITIDIS SEROGROUP A; SOURCE 3 ORGANISM_TAXID: 65699; SOURCE 4 STRAIN: Z2491; SOURCE 5 GENE: MSRAB, NMA0290, PILB; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BE002; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PSKPILBMSRB KEYWDS PILB, METHIONINE SULFOXIDE REDUCTASE B, COMPLEX WITH SUBSTRATE, KEYWDS 2 DISULFIDE BOND, ELECTRON TRANSPORT, MULTIFUNCTIONAL ENZYME, KEYWDS 3 OXIDOREDUCTASE, REDOX-ACTIVE CENTER, TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR F.M.RANAIVOSON,B.KAUFFMANN,F.FAVIER REVDAT 4 01-NOV-23 3HCH 1 REMARK REVDAT 3 10-NOV-21 3HCH 1 REMARK SEQADV REVDAT 2 09-APR-14 3HCH 1 JRNL VERSN REVDAT 1 13-OCT-09 3HCH 0 JRNL AUTH F.M.RANAIVOSON,F.NEIERS,B.KAUFFMANN,S.BOSCHI-MULLER, JRNL AUTH 2 G.BRANLANT,F.FAVIER JRNL TITL METHIONINE SULFOXIDE REDUCTASE B DISPLAYS A HIGH LEVEL OF JRNL TITL 2 FLEXIBILITY. JRNL REF J.MOL.BIOL. V. 394 83 2009 JRNL REFN ISSN 0022-2836 JRNL PMID 19733575 JRNL DOI 10.1016/J.JMB.2009.08.073 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 14.83 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 35401 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1870 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.16 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2542 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2200 REMARK 3 BIN FREE R VALUE SET COUNT : 136 REMARK 3 BIN FREE R VALUE : 0.2540 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2270 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 158 REMARK 3 SOLVENT ATOMS : 166 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.69 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.139 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.133 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.084 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.086 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.946 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.929 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2582 ; 0.017 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3459 ; 1.611 ; 2.006 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 305 ; 6.052 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 121 ;36.096 ;23.388 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 406 ;15.489 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;21.166 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 341 ; 0.132 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1965 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1226 ; 0.209 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1720 ; 0.310 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 233 ; 0.195 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 74 ; 0.227 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 11 ; 0.154 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1534 ; 1.249 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2414 ; 2.129 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1170 ; 2.723 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1037 ; 4.221 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3HCH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-MAY-09. REMARK 100 THE DEPOSITION ID IS D_1000052965. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-OCT-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.934 REMARK 200 MONOCHROMATOR : DIAMOND (111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37516 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 32.90 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07500 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 28.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.42800 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: 3HCG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 73.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.73 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30 % PEG 400, 0.1M TRIS HCL PH 8.5, REMARK 280 0.2M NA CITRATE, 0.05M TRIS HCL PH 8, MICROBATCH UNDER OIL, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 Y+1/4,X+3/4,-Z+3/4 REMARK 290 14555 -Y+1/4,-X+1/4,-Z+1/4 REMARK 290 15555 Y+3/4,-X+3/4,Z+1/4 REMARK 290 16555 -Y+3/4,X+1/4,Z+3/4 REMARK 290 17555 X+1/4,Z+3/4,-Y+3/4 REMARK 290 18555 -X+3/4,Z+1/4,Y+3/4 REMARK 290 19555 -X+1/4,-Z+1/4,-Y+1/4 REMARK 290 20555 X+3/4,-Z+3/4,Y+1/4 REMARK 290 21555 Z+1/4,Y+3/4,-X+3/4 REMARK 290 22555 Z+3/4,-Y+3/4,X+1/4 REMARK 290 23555 -Z+3/4,Y+1/4,X+3/4 REMARK 290 24555 -Z+1/4,-Y+1/4,-X+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 77.43950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 77.43950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 77.43950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 77.43950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 77.43950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 77.43950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 77.43950 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 77.43950 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 77.43950 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 77.43950 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 77.43950 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 77.43950 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 77.43950 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 77.43950 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 77.43950 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 77.43950 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 77.43950 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 77.43950 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 38.71975 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 116.15925 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 116.15925 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 38.71975 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 38.71975 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 38.71975 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 116.15925 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 116.15925 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 38.71975 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 116.15925 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 38.71975 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 116.15925 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 38.71975 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 116.15925 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 116.15925 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 116.15925 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 38.71975 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 116.15925 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 38.71975 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 38.71975 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 38.71975 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 116.15925 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 116.15925 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 38.71975 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 38.71975 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 116.15925 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 116.15925 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 116.15925 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 116.15925 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 38.71975 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 116.15925 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 38.71975 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 116.15925 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 38.71975 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 38.71975 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 38.71975 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 377 REMARK 465 THR B 377 REMARK 465 TYR B 462 REMARK 465 ASN B 463 REMARK 465 MET B 464 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND1 HIS A 472 O HOH A 128 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 379 53.27 -166.15 REMARK 500 PRO A 483 41.13 -87.62 REMARK 500 ALA A 511 -9.47 -54.45 REMARK 500 PRO B 443 132.64 -39.94 REMARK 500 PHE B 460 76.74 -107.73 REMARK 500 PRO B 483 38.81 -88.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE RSM A 1000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE RSM A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CIT A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE P6G A 1005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE RSM B 1000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TRS B 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE P6G B 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE P6G B 1007 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE P6G B 1008 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE P6G B 1009 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3HCG RELATED DB: PDB REMARK 900 RELATED ID: 3HCI RELATED DB: PDB REMARK 900 RELATED ID: 3HCJ RELATED DB: PDB DBREF 3HCH A 377 522 UNP Q9JWM8 MSRAB_NEIMA 377 522 DBREF 3HCH B 377 522 UNP Q9JWM8 MSRAB_NEIMA 377 522 SEQADV 3HCH SER A 440 UNP Q9JWM8 CYS 440 ENGINEERED MUTATION SEQADV 3HCH SER A 495 UNP Q9JWM8 CYS 495 ENGINEERED MUTATION SEQADV 3HCH SER B 440 UNP Q9JWM8 CYS 440 ENGINEERED MUTATION SEQADV 3HCH SER B 495 UNP Q9JWM8 CYS 495 ENGINEERED MUTATION SEQRES 1 A 146 THR TYR LYS LYS PRO SER ASP ALA GLU LEU LYS ARG THR SEQRES 2 A 146 LEU THR GLU GLU GLN TYR GLN VAL THR GLN ASN SER ALA SEQRES 3 A 146 THR GLU TYR ALA PHE SER HIS GLU TYR ASP HIS LEU PHE SEQRES 4 A 146 LYS PRO GLY ILE TYR VAL ASP VAL VAL SER GLY GLU PRO SEQRES 5 A 146 LEU PHE SER SER ALA ASP LYS TYR ASP SER GLY SER GLY SEQRES 6 A 146 TRP PRO SER PHE THR ARG PRO ILE ASP ALA LYS SER VAL SEQRES 7 A 146 THR GLU HIS ASP ASP PHE SER TYR ASN MET ARG ARG THR SEQRES 8 A 146 GLU VAL ARG SER HIS ALA ALA ASP SER HIS LEU GLY HIS SEQRES 9 A 146 VAL PHE PRO ASP GLY PRO ARG ASP LYS GLY GLY LEU ARG SEQRES 10 A 146 TYR SER ILE ASN GLY ALA SER LEU LYS PHE ILE PRO LEU SEQRES 11 A 146 GLU GLN MET ASP ALA ALA GLY TYR GLY ALA LEU LYS SER SEQRES 12 A 146 LYS VAL LYS SEQRES 1 B 146 THR TYR LYS LYS PRO SER ASP ALA GLU LEU LYS ARG THR SEQRES 2 B 146 LEU THR GLU GLU GLN TYR GLN VAL THR GLN ASN SER ALA SEQRES 3 B 146 THR GLU TYR ALA PHE SER HIS GLU TYR ASP HIS LEU PHE SEQRES 4 B 146 LYS PRO GLY ILE TYR VAL ASP VAL VAL SER GLY GLU PRO SEQRES 5 B 146 LEU PHE SER SER ALA ASP LYS TYR ASP SER GLY SER GLY SEQRES 6 B 146 TRP PRO SER PHE THR ARG PRO ILE ASP ALA LYS SER VAL SEQRES 7 B 146 THR GLU HIS ASP ASP PHE SER TYR ASN MET ARG ARG THR SEQRES 8 B 146 GLU VAL ARG SER HIS ALA ALA ASP SER HIS LEU GLY HIS SEQRES 9 B 146 VAL PHE PRO ASP GLY PRO ARG ASP LYS GLY GLY LEU ARG SEQRES 10 B 146 TYR SER ILE ASN GLY ALA SER LEU LYS PHE ILE PRO LEU SEQRES 11 B 146 GLU GLN MET ASP ALA ALA GLY TYR GLY ALA LEU LYS SER SEQRES 12 B 146 LYS VAL LYS HET RSM A1000 28 HET RSM A1001 14 HET CIT A1003 13 HET P6G A1005 19 HET RSM B1000 14 HET TRS B1002 8 HET P6G B1004 19 HET P6G B1007 19 HET P6G B1008 19 HET P6G B1009 19 HETNAM RSM (2S)-2-(ACETYLAMINO)-N-METHYL-4-[(R)- HETNAM 2 RSM METHYLSULFINYL]BUTANAMIDE HETNAM CIT CITRIC ACID HETNAM P6G HEXAETHYLENE GLYCOL HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETSYN P6G POLYETHYLENE GLYCOL PEG400 HETSYN TRS TRIS BUFFER FORMUL 3 RSM 3(C8 H16 N2 O3 S) FORMUL 5 CIT C6 H8 O7 FORMUL 6 P6G 5(C12 H26 O7) FORMUL 8 TRS C4 H12 N O3 1+ FORMUL 13 HOH *166(H2 O) HELIX 1 1 SER A 382 LEU A 390 1 9 HELIX 2 2 THR A 391 SER A 401 1 11 HELIX 3 3 HIS A 409 LEU A 414 5 6 HELIX 4 4 ASP A 450 LYS A 452 5 3 HELIX 5 5 PHE A 460 MET A 464 5 5 HELIX 6 6 PRO A 486 GLY A 490 5 5 HELIX 7 7 GLU A 507 ASP A 510 5 4 HELIX 8 8 TYR A 514 LYS A 518 5 5 HELIX 9 9 SER B 382 LEU B 390 1 9 HELIX 10 10 THR B 391 SER B 401 1 11 HELIX 11 11 HIS B 409 LEU B 414 5 6 HELIX 12 12 ASP B 450 LYS B 452 5 3 HELIX 13 13 PRO B 486 GLY B 490 5 5 HELIX 14 14 GLN B 508 GLY B 513 1 6 HELIX 15 15 TYR B 514 VAL B 521 5 8 SHEET 1 A 3 PRO A 428 SER A 431 0 SHEET 2 A 3 GLY A 418 ASP A 422 -1 N TYR A 420 O PHE A 430 SHEET 3 A 3 LEU A 501 PRO A 505 -1 O ILE A 504 N ILE A 419 SHEET 1 B 6 LYS A 435 TYR A 436 0 SHEET 2 B 6 SER A 444 PHE A 445 -1 O SER A 444 N TYR A 436 SHEET 3 B 6 ARG A 493 ILE A 496 -1 O TYR A 494 N PHE A 445 SHEET 4 B 6 HIS A 477 PHE A 482 -1 N HIS A 480 O SER A 495 SHEET 5 B 6 ARG A 466 SER A 471 -1 N VAL A 469 O GLY A 479 SHEET 6 B 6 VAL A 454 ASP A 459 -1 N ASP A 459 O ARG A 466 SHEET 1 C 3 PRO B 428 SER B 431 0 SHEET 2 C 3 GLY B 418 ASP B 422 -1 N TYR B 420 O PHE B 430 SHEET 3 C 3 LEU B 501 PRO B 505 -1 O ILE B 504 N ILE B 419 SHEET 1 D 6 LYS B 435 TYR B 436 0 SHEET 2 D 6 SER B 444 PHE B 445 -1 O SER B 444 N TYR B 436 SHEET 3 D 6 ARG B 493 ILE B 496 -1 O TYR B 494 N PHE B 445 SHEET 4 D 6 HIS B 477 PHE B 482 -1 N HIS B 480 O SER B 495 SHEET 5 D 6 ARG B 466 SER B 471 -1 N VAL B 469 O GLY B 479 SHEET 6 D 6 VAL B 454 ASP B 459 -1 N HIS B 457 O GLU B 468 SITE 1 AC1 8 HOH A 20 TRP A 442 ARG A 466 GLY A 479 SITE 2 AC1 8 HIS A 480 PHE A 482 ARG A 493 SER A 495 SITE 1 AC2 13 HOH A 46 HOH A 109 TYR A 436 ASP A 437 SITE 2 AC2 13 SER A 438 LYS A 489 HOH B 4 TYR B 436 SITE 3 AC2 13 ASP B 437 SER B 438 ASP B 484 LYS B 489 SITE 4 AC2 13 P6G B1009 SITE 1 AC3 7 ALA A 433 ASP A 434 LYS A 435 TYR A 436 SITE 2 AC3 7 LYS A 489 ASP B 488 LYS B 489 SITE 1 AC4 6 GLU A 456 ARG A 465 THR A 467 PHE A 482 SITE 2 AC4 6 PRO A 483 ASP A 484 SITE 1 AC5 8 HOH B 110 TRP B 442 ARG B 466 GLY B 479 SITE 2 AC5 8 HIS B 480 PHE B 482 SER B 495 P6G B1008 SITE 1 AC6 7 PRO A 417 GLU A 507 HOH B 95 ALA B 451 SITE 2 AC6 7 VAL B 454 THR B 455 GLU B 456 SITE 1 AC7 7 THR B 389 GLN B 394 VAL B 423 LYS B 502 SITE 2 AC7 7 ALA B 512 TYR B 514 P6G B1007 SITE 1 AC8 6 LYS B 416 PRO B 417 PHE B 503 GLN B 508 SITE 2 AC8 6 ALA B 511 P6G B1004 SITE 1 AC9 7 ARG B 465 THR B 467 VAL B 481 PRO B 483 SITE 2 AC9 7 ASP B 484 ARG B 493 RSM B1000 SITE 1 BC1 4 SER A 438 RSM A1001 SER B 438 ASP B 484 CRYST1 154.879 154.879 154.879 90.00 90.00 90.00 P 43 3 2 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006457 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006457 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006457 0.00000