HEADER COMPLEX(ANTIBODY-ANTIGEN) 11-AUG-88 3HFM TITLE STRUCTURE OF AN ANTIBODY-ANTIGEN COMPLEX. CRYSTAL STRUCTURE OF THE TITLE 2 HY/HEL-10 FAB-LYSOZYME COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYHEL-10 IGG1 FAB (LIGHT CHAIN); COMPND 3 CHAIN: L; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: HYHEL-10 IGG1 FAB (HEAVY CHAIN); COMPND 7 CHAIN: H; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: HEN EGG WHITE LYSOZYME; COMPND 11 CHAIN: Y; COMPND 12 EC: 3.2.1.17; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 7 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 8 ORGANISM_TAXID: 10090; SOURCE 9 MOL_ID: 3; SOURCE 10 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 11 ORGANISM_COMMON: CHICKEN; SOURCE 12 ORGANISM_TAXID: 9031 KEYWDS COMPLEX(ANTIBODY-ANTIGEN) EXPDTA X-RAY DIFFRACTION AUTHOR E.A.PADLAN,D.R.DAVIES REVDAT 6 20-NOV-24 3HFM 1 REMARK REVDAT 5 05-JUN-24 3HFM 1 SSBOND REVDAT 4 24-FEB-09 3HFM 1 VERSN REVDAT 3 01-APR-03 3HFM 1 JRNL REVDAT 2 15-JAN-90 3HFM 1 JRNL REVDAT 1 12-JUL-89 3HFM 0 JRNL AUTH E.A.PADLAN,E.W.SILVERTON,S.SHERIFF,G.H.COHEN,S.J.SMITH-GILL, JRNL AUTH 2 D.R.DAVIES JRNL TITL STRUCTURE OF AN ANTIBODY-ANTIGEN COMPLEX: CRYSTAL STRUCTURE JRNL TITL 2 OF THE HYHEL-10 FAB-LYSOZYME COMPLEX. JRNL REF PROC.NATL.ACAD.SCI.USA V. 86 5938 1989 JRNL REFN ISSN 0027-8424 JRNL PMID 2762305 JRNL DOI 10.1073/PNAS.86.15.5938 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH S.J.SMITH-GILL,C.MAINHART,T.B.LAVOIE,R.J.FELDMANN,W.DROHAN, REMARK 1 AUTH 2 B.R.BROOKS REMARK 1 TITL A THREE-DIMENSIONAL MODEL OF AN ANTI-LYSOZYME ANTIBODY REMARK 1 REF J.MOL.BIOL. V. 194 713 1987 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 2 REMARK 1 AUTH E.W.SILVERTON,E.A.PADLAN,D.R.DAVIES,S.SMITH-GILL,M.POTTER REMARK 1 TITL CRYSTALLINE MONOCLONAL ANTIBODY FABS COMPLEXED TO HEN EGG REMARK 1 TITL 2 WHITE LYSOZYME REMARK 1 REF J.MOL.BIOL. V. 180 761 1984 REMARK 1 REFN ISSN 0022-2836 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PROLSQ REMARK 3 AUTHORS : KONNERT,HENDRICKSON REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.246 REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL WITH ALL DATA. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4296 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 1 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.012 ; NULL REMARK 3 ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3HFM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000179000. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.73400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 68.83900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 59.36700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 68.83900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.73400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 59.36700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H, Y REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O TYR L 186 OH TYR L 192 1.91 REMARK 500 N ASP L 151 O SER L 191 1.95 REMARK 500 NH1 ARG Y 5 O TRP Y 123 2.09 REMARK 500 O PRO H 147 NE2 HIS H 199 2.13 REMARK 500 O SER H 156 N SER H 158 2.16 REMARK 500 O ILE H 29 N SER H 31 2.18 REMARK 500 ND2 ASN Y 46 OD1 ASP Y 52 2.19 REMARK 500 OG SER Y 36 O ILE Y 55 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG L 24 CD - NE - CZ ANGL. DEV. = 10.5 DEGREES REMARK 500 ARG L 45 CD - NE - CZ ANGL. DEV. = 28.2 DEGREES REMARK 500 TYR L 50 CA - CB - CG ANGL. DEV. = -12.9 DEGREES REMARK 500 ASN L 145 CA - CB - CG ANGL. DEV. = 18.1 DEGREES REMARK 500 ARG L 155 CD - NE - CZ ANGL. DEV. = 11.4 DEGREES REMARK 500 ARG L 155 NE - CZ - NH1 ANGL. DEV. = 6.7 DEGREES REMARK 500 ASN L 212 CA - CB - CG ANGL. DEV. = 17.7 DEGREES REMARK 500 GLU L 213 N - CA - C ANGL. DEV. = 16.9 DEGREES REMARK 500 ARG H 38 CA - CB - CG ANGL. DEV. = 13.6 DEGREES REMARK 500 ARG H 38 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG H 38 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 ARG H 44 NE - CZ - NH2 ANGL. DEV. = -4.7 DEGREES REMARK 500 TYR H 94 CA - CB - CG ANGL. DEV. = 15.2 DEGREES REMARK 500 ASN H 133 CA - CB - CG ANGL. DEV. = 14.6 DEGREES REMARK 500 GLY H 162 N - CA - C ANGL. DEV. = 26.3 DEGREES REMARK 500 TYR H 175 N - CA - C ANGL. DEV. = 16.2 DEGREES REMARK 500 LYS H 209 C - N - CA ANGL. DEV. = 17.8 DEGREES REMARK 500 VAL H 211 N - CA - C ANGL. DEV. = -16.4 DEGREES REMARK 500 ARG Y 5 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG Y 14 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 TYR Y 20 N - CA - CB ANGL. DEV. = 11.2 DEGREES REMARK 500 ARG Y 21 CD - NE - CZ ANGL. DEV. = -8.6 DEGREES REMARK 500 ARG Y 45 CD - NE - CZ ANGL. DEV. = 9.7 DEGREES REMARK 500 ARG Y 45 NE - CZ - NH1 ANGL. DEV. = 4.5 DEGREES REMARK 500 ASN Y 46 CB - CA - C ANGL. DEV. = 12.7 DEGREES REMARK 500 ASP Y 101 CB - CG - OD1 ANGL. DEV. = 5.4 DEGREES REMARK 500 ARG Y 114 NE - CZ - NH1 ANGL. DEV. = 4.2 DEGREES REMARK 500 ARG Y 128 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO L 15 107.74 -26.68 REMARK 500 GLN L 27 159.66 172.31 REMARK 500 ILE L 29 63.16 8.94 REMARK 500 ASN L 31 -15.24 85.38 REMARK 500 ASN L 32 72.32 -104.69 REMARK 500 SER L 40 115.02 -6.36 REMARK 500 HIS L 41 33.97 81.25 REMARK 500 PRO L 44 -177.90 -50.55 REMARK 500 LEU L 47 -66.30 -104.05 REMARK 500 TYR L 50 -72.15 29.73 REMARK 500 ALA L 51 -41.41 -158.14 REMARK 500 SER L 67 140.72 163.42 REMARK 500 SER L 77 60.99 65.73 REMARK 500 SER L 91 15.59 -145.04 REMARK 500 ARG L 108 -157.72 -86.86 REMARK 500 SER L 122 -70.04 -47.62 REMARK 500 ALA L 130 93.61 168.27 REMARK 500 LEU L 136 66.66 -116.94 REMARK 500 TYR L 140 135.37 175.71 REMARK 500 LYS L 142 -40.97 -25.00 REMARK 500 ILE L 144 124.99 160.87 REMARK 500 ASP L 151 -135.55 71.15 REMARK 500 GLU L 154 155.65 -26.90 REMARK 500 ARG L 155 -106.70 -112.33 REMARK 500 GLN L 156 -114.03 172.74 REMARK 500 LEU L 160 84.18 -157.12 REMARK 500 SER L 162 102.29 179.59 REMARK 500 GLN L 166 154.71 -46.30 REMARK 500 SER L 168 18.74 -67.09 REMARK 500 LYS L 169 -91.13 -114.82 REMARK 500 SER L 171 21.49 45.05 REMARK 500 TYR L 173 -137.83 -105.41 REMARK 500 SER L 174 133.75 143.14 REMARK 500 SER L 177 113.27 179.19 REMARK 500 GLU L 187 45.13 -95.69 REMARK 500 ASN L 190 -30.44 -155.76 REMARK 500 CYS L 194 78.58 -114.45 REMARK 500 ARG L 211 98.40 -64.24 REMARK 500 GLU L 213 -160.45 48.94 REMARK 500 GLN H 16 -148.43 -106.91 REMARK 500 THR H 30 -32.80 -12.34 REMARK 500 SER H 31 -24.92 -164.41 REMARK 500 MET H 48 -94.59 -89.89 REMARK 500 SER H 54 -70.47 115.19 REMARK 500 LYS H 64 -114.61 -13.22 REMARK 500 SER H 65 24.04 -142.47 REMARK 500 SER H 68 85.57 177.36 REMARK 500 ASN H 76 -1.60 39.69 REMARK 500 SER H 84 73.69 31.49 REMARK 500 ASP H 89 0.28 -61.75 REMARK 500 REMARK 500 THIS ENTRY HAS 94 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 3HFM Y 1 129 UNP P00698 LYSC_CHICK 19 147 DBREF 3HFM L 1 214 PDB 3HFM 3HFM 1 214 DBREF 3HFM H 1 215 PDB 3HFM 3HFM 1 215 SEQRES 1 L 214 ASP ILE VAL LEU THR GLN SER PRO ALA THR LEU SER VAL SEQRES 2 L 214 THR PRO GLY ASN SER VAL SER LEU SER CYS ARG ALA SER SEQRES 3 L 214 GLN SER ILE GLY ASN ASN LEU HIS TRP TYR GLN GLN LYS SEQRES 4 L 214 SER HIS GLU SER PRO ARG LEU LEU ILE LYS TYR ALA SER SEQRES 5 L 214 GLN SER ILE SER GLY ILE PRO SER ARG PHE SER GLY SER SEQRES 6 L 214 GLY SER GLY THR ASP PHE THR LEU SER ILE ASN SER VAL SEQRES 7 L 214 GLU THR GLU ASP PHE GLY MET TYR PHE CYS GLN GLN SER SEQRES 8 L 214 ASN SER TRP PRO TYR THR PHE GLY GLY GLY THR LYS LEU SEQRES 9 L 214 GLU ILE LYS ARG ALA ASP ALA ALA PRO THR VAL SER ILE SEQRES 10 L 214 PHE PRO PRO SER SER GLU GLN LEU THR SER GLY GLY ALA SEQRES 11 L 214 SER VAL VAL CYS PHE LEU ASN ASN PHE TYR PRO LYS ASP SEQRES 12 L 214 ILE ASN VAL LYS TRP LYS ILE ASP GLY SER GLU ARG GLN SEQRES 13 L 214 ASN GLY VAL LEU ASN SER TRP THR ASP GLN ASP SER LYS SEQRES 14 L 214 ASP SER THR TYR SER MET SER SER THR LEU THR LEU THR SEQRES 15 L 214 LYS ASP GLU TYR GLU ARG HIS ASN SER TYR THR CYS GLU SEQRES 16 L 214 ALA THR HIS LYS THR SER THR SER PRO ILE VAL LYS SER SEQRES 17 L 214 PHE ASN ARG ASN GLU CYS SEQRES 1 H 215 ASP VAL GLN LEU GLN GLU SER GLY PRO SER LEU VAL LYS SEQRES 2 H 215 PRO SER GLN THR LEU SER LEU THR CYS SER VAL THR GLY SEQRES 3 H 215 ASP SER ILE THR SER ASP TYR TRP SER TRP ILE ARG LYS SEQRES 4 H 215 PHE PRO GLY ASN ARG LEU GLU TYR MET GLY TYR VAL SER SEQRES 5 H 215 TYR SER GLY SER THR TYR TYR ASN PRO SER LEU LYS SER SEQRES 6 H 215 ARG ILE SER ILE THR ARG ASP THR SER LYS ASN GLN TYR SEQRES 7 H 215 TYR LEU ASP LEU ASN SER VAL THR THR GLU ASP THR ALA SEQRES 8 H 215 THR TYR TYR CYS ALA ASN TRP ASP GLY ASP TYR TRP GLY SEQRES 9 H 215 GLN GLY THR LEU VAL THR VAL SER ALA ALA LYS THR THR SEQRES 10 H 215 PRO PRO SER VAL TYR PRO LEU ALA PRO GLY SER ALA ALA SEQRES 11 H 215 GLN THR ASN SER MET VAL THR LEU GLY CYS LEU VAL LYS SEQRES 12 H 215 GLY TYR PHE PRO GLU PRO VAL THR VAL THR TRP ASN SER SEQRES 13 H 215 GLY SER LEU SER SER GLY VAL HIS THR PHE PRO ALA VAL SEQRES 14 H 215 LEU GLN SER ASP LEU TYR THR LEU SER SER SER VAL THR SEQRES 15 H 215 VAL PRO SER SER PRO ARG PRO SER GLU THR VAL THR CYS SEQRES 16 H 215 ASN VAL ALA HIS PRO ALA SER SER THR LYS VAL ASP LYS SEQRES 17 H 215 LYS ILE VAL PRO ARG ASP CYS SEQRES 1 Y 129 LYS VAL PHE GLY ARG CYS GLU LEU ALA ALA ALA MET LYS SEQRES 2 Y 129 ARG HIS GLY LEU ASP ASN TYR ARG GLY TYR SER LEU GLY SEQRES 3 Y 129 ASN TRP VAL CYS ALA ALA LYS PHE GLU SER ASN PHE ASN SEQRES 4 Y 129 THR GLN ALA THR ASN ARG ASN THR ASP GLY SER THR ASP SEQRES 5 Y 129 TYR GLY ILE LEU GLN ILE ASN SER ARG TRP TRP CYS ASN SEQRES 6 Y 129 ASP GLY ARG THR PRO GLY SER ARG ASN LEU CYS ASN ILE SEQRES 7 Y 129 PRO CYS SER ALA LEU LEU SER SER ASP ILE THR ALA SER SEQRES 8 Y 129 VAL ASN CYS ALA LYS LYS ILE VAL SER ASP GLY ASN GLY SEQRES 9 Y 129 MET ASN ALA TRP VAL ALA TRP ARG ASN ARG CYS LYS GLY SEQRES 10 Y 129 THR ASP VAL GLN ALA TRP ILE ARG GLY CYS ARG LEU FORMUL 4 HOH *(H2 O) HELIX 1 1 GLU L 79 PHE L 83 5 5 HELIX 2 2 SER L 121 GLY L 128 1 8 HELIX 3 3 THR L 182 TYR L 186 5 5 HELIX 4 4 THR H 86 THR H 90 5 5 HELIX 5 5 ARG Y 5 ARG Y 14 1 10 HELIX 6 6 LEU Y 25 ASN Y 37 1 13 HELIX 7 7 CYS Y 80 SER Y 85 1 6 HELIX 8 8 ILE Y 88 VAL Y 99 1 12 HELIX 9 9 ASN Y 103 ALA Y 107 5 5 HELIX 10 10 TRP Y 108 ARG Y 114 1 7 HELIX 11 11 ASP Y 119 ARG Y 125 5 7 SHEET 1 A 4 LEU L 4 SER L 7 0 SHEET 2 A 4 LEU L 21 ALA L 25 -1 N SER L 22 O SER L 7 SHEET 3 A 4 ASP L 70 ILE L 75 -1 O PHE L 71 N CYS L 23 SHEET 4 A 4 PHE L 62 GLY L 66 -1 O SER L 63 N SER L 74 SHEET 1 B 6 THR L 10 VAL L 13 0 SHEET 2 B 6 LYS L 103 ILE L 106 1 O LYS L 103 N LEU L 11 SHEET 3 B 6 GLY L 84 GLN L 90 -1 O GLY L 84 N LEU L 104 SHEET 4 B 6 LEU L 33 GLN L 38 -1 N HIS L 34 O GLN L 89 SHEET 5 B 6 ARG L 45 LYS L 49 -1 O ARG L 45 N GLN L 37 SHEET 6 B 6 GLN L 53 SER L 54 -1 O GLN L 53 N LYS L 49 SHEET 1 C 4 THR L 114 PHE L 118 0 SHEET 2 C 4 SER L 131 ASN L 137 -1 N VAL L 133 O PHE L 118 SHEET 3 C 4 SER L 174 THR L 180 -1 O MET L 175 N LEU L 136 SHEET 4 C 4 VAL L 159 TRP L 163 -1 O LEU L 160 N THR L 178 SHEET 1 D 3 ASN L 145 ILE L 150 0 SHEET 2 D 3 SER L 191 THR L 197 -1 N THR L 193 O LYS L 149 SHEET 3 D 3 ILE L 205 ASN L 210 -1 N ILE L 205 O ALA L 196 SHEET 1 E 4 GLN H 3 SER H 7 0 SHEET 2 E 4 LEU H 18 THR H 25 -1 O THR H 21 N SER H 7 SHEET 3 E 4 GLN H 77 LEU H 82 -1 O TYR H 78 N CYS H 22 SHEET 4 E 4 THR H 70 ASP H 72 -1 O THR H 70 N TYR H 79 SHEET 1 F 6 LEU H 11 VAL H 12 0 SHEET 2 F 6 THR H 107 VAL H 111 1 O THR H 110 N VAL H 12 SHEET 3 F 6 ALA H 91 ASN H 97 -1 O ALA H 91 N VAL H 109 SHEET 4 F 6 TRP H 34 LYS H 39 -1 N SER H 35 O ALA H 96 SHEET 5 F 6 LEU H 45 SER H 52 -1 O GLU H 46 N ARG H 38 SHEET 6 F 6 SER H 56 TYR H 59 -1 O SER H 56 N SER H 52 SHEET 1 G 4 SER H 120 LEU H 124 0 SHEET 2 G 4 MET H 135 TYR H 145 -1 O GLY H 139 N LEU H 124 SHEET 3 G 4 TYR H 175 PRO H 184 -1 O TYR H 175 N TYR H 145 SHEET 4 G 4 VAL H 163 THR H 165 -1 N HIS H 164 O SER H 180 SHEET 1 H 4 SER H 120 LEU H 124 0 SHEET 2 H 4 MET H 135 TYR H 145 -1 O GLY H 139 N LEU H 124 SHEET 3 H 4 TYR H 175 PRO H 184 -1 O TYR H 175 N TYR H 145 SHEET 4 H 4 VAL H 169 LEU H 170 -1 N VAL H 169 O THR H 176 SHEET 1 I 3 THR H 153 TRP H 154 0 SHEET 2 I 3 VAL H 193 ASN H 196 -1 N ASN H 196 O THR H 153 SHEET 3 I 3 ASP H 207 ILE H 210 -1 N LYS H 208 O CYS H 195 SHEET 1 J 3 ARG Y 45 ASN Y 46 0 SHEET 2 J 3 SER Y 50 TYR Y 53 -1 O SER Y 50 N ASN Y 46 SHEET 3 J 3 ILE Y 58 ASN Y 59 -1 N ILE Y 58 O TYR Y 53 SSBOND 1 CYS L 23 CYS L 88 1555 1555 2.03 SSBOND 2 CYS L 134 CYS L 194 1555 1555 2.01 SSBOND 3 CYS L 214 CYS H 215 1555 1555 2.06 SSBOND 4 CYS H 22 CYS H 95 1555 1555 2.02 SSBOND 5 CYS H 140 CYS H 195 1555 1555 2.03 SSBOND 6 CYS Y 6 CYS Y 127 1555 1555 2.04 SSBOND 7 CYS Y 30 CYS Y 115 1555 1555 2.02 SSBOND 8 CYS Y 64 CYS Y 80 1555 1555 2.05 SSBOND 9 CYS Y 76 CYS Y 94 1555 1555 2.02 CISPEP 1 SER L 7 PRO L 8 0 -0.39 CISPEP 2 TRP L 94 PRO L 95 0 0.95 CISPEP 3 TYR L 140 PRO L 141 0 1.33 CISPEP 4 PHE H 146 PRO H 147 0 -1.19 CISPEP 5 GLU H 148 PRO H 149 0 -1.27 CISPEP 6 SER H 186 PRO H 187 0 0.64 CRYST1 57.468 118.734 137.678 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 0.017401 0.000000 0.000000 0.00000 ORIGX2 0.000000 0.008422 0.000000 0.00000 ORIGX3 0.000000 0.000000 0.007263 0.00000 SCALE1 0.017401 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008422 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007263 0.00000