HEADER LYASE 20-MAY-09 3HIN TITLE CRYSTAL STRUCTURE OF PUTATIVE ENOYL-COA HYDRATASE FROM TITLE 2 RHODOPSEUDOMONAS PALUSTRIS CGA009 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE 3-HYDROXYBUTYRYL-COA DEHYDRATASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 4.2.1.55; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHODOPSEUDOMONAS PALUSTRIS; SOURCE 3 ORGANISM_TAXID: 1076; SOURCE 4 STRAIN: CGA009; SOURCE 5 GENE: RPA1786; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)CODON+RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: BC-PSGX3(BC) KEYWDS STRUCTURAL GENOMICS, PROTEIN STRUCTURE INITIATIVE, NEW YORK KEYWDS 2 STRUCTURAL GENOMIX RESEARCH CONSORTIUM, NYSGXRC, ENOYL-COA KEYWDS 3 HYDRATASE, RHODOPSEUDOMONAS PALUSTRIS, LYASE, PSI-2, NEW YORK SGX KEYWDS 4 RESEARCH CENTER FOR STRUCTURAL GENOMICS EXPDTA X-RAY DIFFRACTION AUTHOR V.N.MALASHKEVICH,R.TORO,C.MORANO,J.M.SAUDER,S.K.BURLEY,S.C.ALMO,NEW AUTHOR 2 YORK SGX RESEARCH CENTER FOR STRUCTURAL GENOMICS (NYSGXRC) REVDAT 7 21-FEB-24 3HIN 1 REMARK REVDAT 6 10-FEB-21 3HIN 1 AUTHOR JRNL REVDAT 5 21-NOV-18 3HIN 1 AUTHOR REVDAT 4 01-NOV-17 3HIN 1 REMARK REVDAT 3 24-OCT-12 3HIN 1 AUTHOR REVDAT 2 13-JUL-11 3HIN 1 VERSN REVDAT 1 02-JUN-09 3HIN 0 JRNL AUTH V.N.MALASHKEVICH,R.TORO,C.MORANO,J.M.SAUDER,S.K.BURLEY, JRNL AUTH 2 S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF PUTATIVE ENOYL-COA HYDRATASE FROM JRNL TITL 2 RHODOPSEUDOMONAS PALUSTRIS CGA009 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.25 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 38103 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.227 REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.274 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1929 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.06 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2929 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2940 REMARK 3 BIN FREE R VALUE SET COUNT : 166 REMARK 3 BIN FREE R VALUE : 0.3520 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3803 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 242 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.02 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.206 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.187 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.158 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.366 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.935 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3863 ; 0.023 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5239 ; 1.946 ; 1.969 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 507 ; 6.459 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 158 ;37.770 ;23.418 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 640 ;18.873 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 32 ;21.379 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 615 ; 0.147 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2896 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2515 ; 1.173 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4011 ; 2.011 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1348 ; 3.183 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1228 ; 4.780 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 9 A 266 REMARK 3 RESIDUE RANGE : A 276 A 406 REMARK 3 ORIGIN FOR THE GROUP (A): 64.5968 41.2999 63.9450 REMARK 3 T TENSOR REMARK 3 T11: 0.1059 T22: 0.0159 REMARK 3 T33: 0.0395 T12: 0.0239 REMARK 3 T13: 0.0188 T23: -0.0095 REMARK 3 L TENSOR REMARK 3 L11: 0.7669 L22: 1.2205 REMARK 3 L33: 0.7509 L12: 0.2606 REMARK 3 L13: -0.1232 L23: -0.0827 REMARK 3 S TENSOR REMARK 3 S11: -0.0629 S12: 0.0610 S13: -0.1636 REMARK 3 S21: -0.0452 S22: 0.0213 S23: -0.0072 REMARK 3 S31: 0.2107 S32: 0.0292 S33: 0.0416 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 11 B 261 REMARK 3 RESIDUE RANGE : B 276 B 386 REMARK 3 ORIGIN FOR THE GROUP (A): 60.6579 82.5781 84.4665 REMARK 3 T TENSOR REMARK 3 T11: 0.0632 T22: 0.0086 REMARK 3 T33: 0.0761 T12: 0.0023 REMARK 3 T13: 0.0290 T23: -0.0214 REMARK 3 L TENSOR REMARK 3 L11: 0.5653 L22: 0.7467 REMARK 3 L33: 0.9867 L12: 0.0717 REMARK 3 L13: -0.0422 L23: 0.2865 REMARK 3 S TENSOR REMARK 3 S11: 0.0031 S12: -0.0419 S13: 0.1444 REMARK 3 S21: 0.1412 S22: -0.0199 S23: 0.1137 REMARK 3 S31: -0.1160 S32: -0.0435 S33: 0.0168 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : RESIDUAL ONLY REMARK 4 REMARK 4 3HIN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-MAY-09. REMARK 100 THE DEPOSITION ID IS D_1000053180. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-APR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.9791 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42979 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 19.10 REMARK 200 R MERGE (I) : 0.12700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 32.1570 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 18.70 REMARK 200 R MERGE FOR SHELL (I) : 0.51600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.71 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 4000, 0.1 M TRIS HCL, 0.2 M REMARK 280 SODIUM ACETATE, PH 8.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 62.05550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.05550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 62.05550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 62.05550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 62.05550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 62.05550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 62.05550 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 62.05550 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 62.05550 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 62.05550 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 62.05550 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 62.05550 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 62.05550 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 62.05550 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 62.05550 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 62.05550 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 62.05550 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 62.05550 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 26880 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 53330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -202.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -69.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10650 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -66.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 LEU A 3 REMARK 465 THR A 4 REMARK 465 GLY A 5 REMARK 465 ASN A 6 REMARK 465 ALA A 7 REMARK 465 GLN A 8 REMARK 465 ARG A 267 REMARK 465 GLU A 268 REMARK 465 GLY A 269 REMARK 465 HIS A 270 REMARK 465 HIS A 271 REMARK 465 HIS A 272 REMARK 465 HIS A 273 REMARK 465 HIS A 274 REMARK 465 HIS A 275 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 LEU B 3 REMARK 465 THR B 4 REMARK 465 GLY B 5 REMARK 465 ASN B 6 REMARK 465 ALA B 7 REMARK 465 GLN B 8 REMARK 465 ALA B 9 REMARK 465 ALA B 10 REMARK 465 LYS B 262 REMARK 465 THR B 263 REMARK 465 ALA B 264 REMARK 465 LYS B 265 REMARK 465 VAL B 266 REMARK 465 ARG B 267 REMARK 465 GLU B 268 REMARK 465 GLY B 269 REMARK 465 HIS B 270 REMARK 465 HIS B 271 REMARK 465 HIS B 272 REMARK 465 HIS B 273 REMARK 465 HIS B 274 REMARK 465 HIS B 275 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 228 O HOH A 284 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 51 CB CYS A 51 SG -0.101 REMARK 500 VAL A 117 CB VAL A 117 CG2 0.146 REMARK 500 GLU A 228 CG GLU A 228 CD 0.095 REMARK 500 GLU B 134 CB GLU B 134 CG -0.162 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 175 NE - CZ - NH1 ANGL. DEV. = -3.1 DEGREES REMARK 500 LEU B 240 CB - CG - CD1 ANGL. DEV. = 16.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 10 139.90 63.49 REMARK 500 PHE A 71 -70.69 -71.01 REMARK 500 GLU B 79 0.84 -65.71 REMARK 500 LEU B 80 110.56 -30.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY A 195 SER A 196 -146.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-11251G RELATED DB: TARGETDB DBREF 3HIN A 3 267 UNP Q6N8W7 Q6N8W7_RHOPA 2 266 DBREF 3HIN B 3 267 UNP Q6N8W7 Q6N8W7_RHOPA 2 266 SEQADV 3HIN MET A 1 UNP Q6N8W7 EXPRESSION TAG SEQADV 3HIN SER A 2 UNP Q6N8W7 EXPRESSION TAG SEQADV 3HIN GLU A 268 UNP Q6N8W7 EXPRESSION TAG SEQADV 3HIN GLY A 269 UNP Q6N8W7 EXPRESSION TAG SEQADV 3HIN HIS A 270 UNP Q6N8W7 EXPRESSION TAG SEQADV 3HIN HIS A 271 UNP Q6N8W7 EXPRESSION TAG SEQADV 3HIN HIS A 272 UNP Q6N8W7 EXPRESSION TAG SEQADV 3HIN HIS A 273 UNP Q6N8W7 EXPRESSION TAG SEQADV 3HIN HIS A 274 UNP Q6N8W7 EXPRESSION TAG SEQADV 3HIN HIS A 275 UNP Q6N8W7 EXPRESSION TAG SEQADV 3HIN MET B 1 UNP Q6N8W7 EXPRESSION TAG SEQADV 3HIN SER B 2 UNP Q6N8W7 EXPRESSION TAG SEQADV 3HIN GLU B 268 UNP Q6N8W7 EXPRESSION TAG SEQADV 3HIN GLY B 269 UNP Q6N8W7 EXPRESSION TAG SEQADV 3HIN HIS B 270 UNP Q6N8W7 EXPRESSION TAG SEQADV 3HIN HIS B 271 UNP Q6N8W7 EXPRESSION TAG SEQADV 3HIN HIS B 272 UNP Q6N8W7 EXPRESSION TAG SEQADV 3HIN HIS B 273 UNP Q6N8W7 EXPRESSION TAG SEQADV 3HIN HIS B 274 UNP Q6N8W7 EXPRESSION TAG SEQADV 3HIN HIS B 275 UNP Q6N8W7 EXPRESSION TAG SEQRES 1 A 275 MET SER LEU THR GLY ASN ALA GLN ALA ALA THR ILE ALA SEQRES 2 A 275 ASP PRO SER THR LEU VAL VAL ASP THR VAL GLY PRO VAL SEQRES 3 A 275 LEU THR ILE GLY LEU ASN ARG PRO LYS LYS ARG ASN ALA SEQRES 4 A 275 LEU ASN ASP GLY LEU MET ALA ALA LEU LYS ASP CYS LEU SEQRES 5 A 275 THR ASP ILE PRO ASP GLN ILE ARG ALA VAL VAL ILE HIS SEQRES 6 A 275 GLY ILE GLY ASP HIS PHE SER ALA GLY LEU ASP LEU SER SEQRES 7 A 275 GLU LEU ARG GLU ARG ASP ALA THR GLU GLY LEU VAL HIS SEQRES 8 A 275 SER GLN THR TRP HIS ARG VAL PHE ASP LYS ILE GLN TYR SEQRES 9 A 275 CYS ARG VAL PRO VAL ILE ALA ALA LEU LYS GLY ALA VAL SEQRES 10 A 275 ILE GLY GLY GLY LEU GLU LEU ALA CYS ALA ALA HIS ILE SEQRES 11 A 275 ARG VAL ALA GLU ALA SER ALA TYR TYR ALA LEU PRO GLU SEQRES 12 A 275 GLY SER ARG GLY ILE PHE VAL GLY GLY GLY GLY SER VAL SEQRES 13 A 275 ARG LEU PRO ARG LEU ILE GLY VAL ALA ARG MET ALA ASP SEQRES 14 A 275 MET MET LEU THR GLY ARG VAL TYR SER ALA ALA GLU GLY SEQRES 15 A 275 VAL VAL HIS GLY PHE SER GLN TYR LEU ILE GLU ASN GLY SEQRES 16 A 275 SER ALA TYR ASP LYS ALA LEU GLU LEU GLY ASN ARG VAL SEQRES 17 A 275 ALA GLN ASN ALA PRO LEU THR ASN PHE ALA VAL LEU GLN SEQRES 18 A 275 ALA LEU PRO MET ILE ALA GLU ALA ASN PRO GLN THR GLY SEQRES 19 A 275 LEU LEU MET GLU SER LEU MET ALA THR VAL ALA GLN SER SEQRES 20 A 275 ASP GLN GLU ALA LYS THR ARG ILE ARG ALA PHE LEU ASP SEQRES 21 A 275 HIS LYS THR ALA LYS VAL ARG GLU GLY HIS HIS HIS HIS SEQRES 22 A 275 HIS HIS SEQRES 1 B 275 MET SER LEU THR GLY ASN ALA GLN ALA ALA THR ILE ALA SEQRES 2 B 275 ASP PRO SER THR LEU VAL VAL ASP THR VAL GLY PRO VAL SEQRES 3 B 275 LEU THR ILE GLY LEU ASN ARG PRO LYS LYS ARG ASN ALA SEQRES 4 B 275 LEU ASN ASP GLY LEU MET ALA ALA LEU LYS ASP CYS LEU SEQRES 5 B 275 THR ASP ILE PRO ASP GLN ILE ARG ALA VAL VAL ILE HIS SEQRES 6 B 275 GLY ILE GLY ASP HIS PHE SER ALA GLY LEU ASP LEU SER SEQRES 7 B 275 GLU LEU ARG GLU ARG ASP ALA THR GLU GLY LEU VAL HIS SEQRES 8 B 275 SER GLN THR TRP HIS ARG VAL PHE ASP LYS ILE GLN TYR SEQRES 9 B 275 CYS ARG VAL PRO VAL ILE ALA ALA LEU LYS GLY ALA VAL SEQRES 10 B 275 ILE GLY GLY GLY LEU GLU LEU ALA CYS ALA ALA HIS ILE SEQRES 11 B 275 ARG VAL ALA GLU ALA SER ALA TYR TYR ALA LEU PRO GLU SEQRES 12 B 275 GLY SER ARG GLY ILE PHE VAL GLY GLY GLY GLY SER VAL SEQRES 13 B 275 ARG LEU PRO ARG LEU ILE GLY VAL ALA ARG MET ALA ASP SEQRES 14 B 275 MET MET LEU THR GLY ARG VAL TYR SER ALA ALA GLU GLY SEQRES 15 B 275 VAL VAL HIS GLY PHE SER GLN TYR LEU ILE GLU ASN GLY SEQRES 16 B 275 SER ALA TYR ASP LYS ALA LEU GLU LEU GLY ASN ARG VAL SEQRES 17 B 275 ALA GLN ASN ALA PRO LEU THR ASN PHE ALA VAL LEU GLN SEQRES 18 B 275 ALA LEU PRO MET ILE ALA GLU ALA ASN PRO GLN THR GLY SEQRES 19 B 275 LEU LEU MET GLU SER LEU MET ALA THR VAL ALA GLN SER SEQRES 20 B 275 ASP GLN GLU ALA LYS THR ARG ILE ARG ALA PHE LEU ASP SEQRES 21 B 275 HIS LYS THR ALA LYS VAL ARG GLU GLY HIS HIS HIS HIS SEQRES 22 B 275 HIS HIS FORMUL 3 HOH *242(H2 O) HELIX 1 1 ASP A 14 SER A 16 5 3 HELIX 2 2 ARG A 33 ARG A 37 5 5 HELIX 3 3 ASN A 41 LEU A 52 1 12 HELIX 4 4 ASP A 76 LEU A 80 5 5 HELIX 5 5 ASP A 84 TYR A 104 1 21 HELIX 6 6 GLY A 119 ALA A 128 1 10 HELIX 7 7 LEU A 141 GLY A 147 5 7 HELIX 8 8 GLY A 153 GLY A 163 1 11 HELIX 9 9 GLY A 163 GLY A 174 1 12 HELIX 10 10 ALA A 179 GLY A 186 1 8 HELIX 11 11 SER A 196 ALA A 209 1 14 HELIX 12 12 ALA A 212 GLN A 221 1 10 HELIX 13 13 GLN A 221 ALA A 229 1 9 HELIX 14 14 ASN A 230 ASP A 248 1 19 HELIX 15 15 ASP A 248 VAL A 266 1 19 HELIX 16 16 ASP B 14 SER B 16 5 3 HELIX 17 17 ARG B 33 ARG B 37 5 5 HELIX 18 18 ASN B 41 LEU B 52 1 12 HELIX 19 19 ASP B 84 TYR B 104 1 21 HELIX 20 20 GLY B 119 ALA B 128 1 10 HELIX 21 21 LEU B 141 GLY B 147 5 7 HELIX 22 22 GLY B 153 GLY B 163 1 11 HELIX 23 23 GLY B 163 GLY B 174 1 12 HELIX 24 24 ALA B 179 GLY B 186 1 8 HELIX 25 25 SER B 196 ALA B 209 1 14 HELIX 26 26 ALA B 212 GLN B 221 1 10 HELIX 27 27 GLN B 221 ALA B 229 1 9 HELIX 28 28 ASN B 230 ASP B 248 1 19 HELIX 29 29 ASP B 248 HIS B 261 1 14 SHEET 1 A 6 LEU A 18 VAL A 23 0 SHEET 2 A 6 VAL A 26 LEU A 31 -1 O VAL A 26 N VAL A 23 SHEET 3 A 6 ALA A 61 GLY A 66 1 O VAL A 63 N ILE A 29 SHEET 4 A 6 VAL A 109 LEU A 113 1 O ILE A 110 N VAL A 62 SHEET 5 A 6 ILE A 130 GLU A 134 1 O VAL A 132 N LEU A 113 SHEET 6 A 6 TYR A 190 ILE A 192 1 O ILE A 192 N ALA A 133 SHEET 1 B 3 ALA A 116 ILE A 118 0 SHEET 2 B 3 TYR A 138 ALA A 140 1 O TYR A 138 N VAL A 117 SHEET 3 B 3 TYR A 177 SER A 178 -1 O TYR A 177 N TYR A 139 SHEET 1 C 6 LEU B 18 VAL B 23 0 SHEET 2 C 6 VAL B 26 LEU B 31 -1 O THR B 28 N ASP B 21 SHEET 3 C 6 ALA B 61 GLY B 66 1 O ALA B 61 N LEU B 27 SHEET 4 C 6 VAL B 109 LEU B 113 1 O ILE B 110 N VAL B 62 SHEET 5 C 6 ILE B 130 GLU B 134 1 O VAL B 132 N LEU B 113 SHEET 6 C 6 TYR B 190 ILE B 192 1 O ILE B 192 N ALA B 133 SHEET 1 D 3 ALA B 116 ILE B 118 0 SHEET 2 D 3 TYR B 138 ALA B 140 1 O TYR B 138 N VAL B 117 SHEET 3 D 3 TYR B 177 SER B 178 -1 O TYR B 177 N TYR B 139 CRYST1 124.111 124.111 124.111 90.00 90.00 90.00 P 21 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008057 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008057 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008057 0.00000