data_3HM4 # _entry.id 3HM4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3HM4 pdb_00003hm4 10.2210/pdb3hm4/pdb RCSB RCSB053302 ? ? WWPDB D_1000053302 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 394179 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3HM4 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-05-28 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of Chemotaxis protein CheX (YP_386777.1) from DESULFOVIBRIO DESULFURICANS G20 at 1.30 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3HM4 _cell.length_a 42.362 _cell.length_b 73.999 _cell.length_c 83.338 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3HM4 _symmetry.Int_Tables_number 19 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Chemotaxis protein CheX' 16565.857 2 ? ? ? ? 2 non-polymer syn 'UNKNOWN LIGAND' ? 1 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 4 water nat water 18.015 312 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)SSSGIEIAKPFVTATTNVLST(MSE)AGIQPIPGQPYVKKNNVAKGDVSAVVGITGHKNGSISVTFTKQCAIAV VKA(MSE)LGDDIQDIIQDTKDAVGEVTN(MSE)ISGQARAALSE(MSE)G(MSE)TFQGATPSVI(MSE)GDGHTISHV TKSPVIAIPFKTNHGEFTVEFCLE ; _entity_poly.pdbx_seq_one_letter_code_can ;GMSSSGIEIAKPFVTATTNVLSTMAGIQPIPGQPYVKKNNVAKGDVSAVVGITGHKNGSISVTFTKQCAIAVVKAMLGDD IQDIIQDTKDAVGEVTNMISGQARAALSEMGMTFQGATPSVIMGDGHTISHVTKSPVIAIPFKTNHGEFTVEFCLE ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier 394179 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 SER n 1 4 SER n 1 5 SER n 1 6 GLY n 1 7 ILE n 1 8 GLU n 1 9 ILE n 1 10 ALA n 1 11 LYS n 1 12 PRO n 1 13 PHE n 1 14 VAL n 1 15 THR n 1 16 ALA n 1 17 THR n 1 18 THR n 1 19 ASN n 1 20 VAL n 1 21 LEU n 1 22 SER n 1 23 THR n 1 24 MSE n 1 25 ALA n 1 26 GLY n 1 27 ILE n 1 28 GLN n 1 29 PRO n 1 30 ILE n 1 31 PRO n 1 32 GLY n 1 33 GLN n 1 34 PRO n 1 35 TYR n 1 36 VAL n 1 37 LYS n 1 38 LYS n 1 39 ASN n 1 40 ASN n 1 41 VAL n 1 42 ALA n 1 43 LYS n 1 44 GLY n 1 45 ASP n 1 46 VAL n 1 47 SER n 1 48 ALA n 1 49 VAL n 1 50 VAL n 1 51 GLY n 1 52 ILE n 1 53 THR n 1 54 GLY n 1 55 HIS n 1 56 LYS n 1 57 ASN n 1 58 GLY n 1 59 SER n 1 60 ILE n 1 61 SER n 1 62 VAL n 1 63 THR n 1 64 PHE n 1 65 THR n 1 66 LYS n 1 67 GLN n 1 68 CYS n 1 69 ALA n 1 70 ILE n 1 71 ALA n 1 72 VAL n 1 73 VAL n 1 74 LYS n 1 75 ALA n 1 76 MSE n 1 77 LEU n 1 78 GLY n 1 79 ASP n 1 80 ASP n 1 81 ILE n 1 82 GLN n 1 83 ASP n 1 84 ILE n 1 85 ILE n 1 86 GLN n 1 87 ASP n 1 88 THR n 1 89 LYS n 1 90 ASP n 1 91 ALA n 1 92 VAL n 1 93 GLY n 1 94 GLU n 1 95 VAL n 1 96 THR n 1 97 ASN n 1 98 MSE n 1 99 ILE n 1 100 SER n 1 101 GLY n 1 102 GLN n 1 103 ALA n 1 104 ARG n 1 105 ALA n 1 106 ALA n 1 107 LEU n 1 108 SER n 1 109 GLU n 1 110 MSE n 1 111 GLY n 1 112 MSE n 1 113 THR n 1 114 PHE n 1 115 GLN n 1 116 GLY n 1 117 ALA n 1 118 THR n 1 119 PRO n 1 120 SER n 1 121 VAL n 1 122 ILE n 1 123 MSE n 1 124 GLY n 1 125 ASP n 1 126 GLY n 1 127 HIS n 1 128 THR n 1 129 ILE n 1 130 SER n 1 131 HIS n 1 132 VAL n 1 133 THR n 1 134 LYS n 1 135 SER n 1 136 PRO n 1 137 VAL n 1 138 ILE n 1 139 ALA n 1 140 ILE n 1 141 PRO n 1 142 PHE n 1 143 LYS n 1 144 THR n 1 145 ASN n 1 146 HIS n 1 147 GLY n 1 148 GLU n 1 149 PHE n 1 150 THR n 1 151 VAL n 1 152 GLU n 1 153 PHE n 1 154 CYS n 1 155 LEU n 1 156 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Dde_0281, YP_386777.1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Desulfovibrio desulfuricans subsp. desulfuricans str. G20' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 207559 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q316R4_DESDG _struct_ref.pdbx_db_accession Q316R4 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MSSSGIEIAKPFVTATTNVLSTMAGIQPIPGQPYVKKNNVAKGDVSAVVGITGHKNGSISVTFTKQCAIAVVKAMLGDDI QDIIQDTKDAVGEVTNMISGQARAALSEMGMTFQGATPSVIMGDGHTISHVTKSPVIAIPFKTNHGEFTVEFCLE ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3HM4 A 2 ? 156 ? Q316R4 1 ? 155 ? 1 155 2 1 3HM4 B 2 ? 156 ? Q316R4 1 ? 155 ? 1 155 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3HM4 GLY A 1 ? UNP Q316R4 ? ? 'expression tag' 0 1 2 3HM4 GLY B 1 ? UNP Q316R4 ? ? 'expression tag' 0 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UNL non-polymer . 'UNKNOWN LIGAND' ? ? ? VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3HM4 # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 1.97 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 37.60 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '15.0000% Glycerol, 0.1700M NaOAc, 25.5000% PEG-4000, 0.1M TRIS pH 8.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat collimating mirror, toroid focusing mirror' _diffrn_detector.pdbx_collection_date 2009-03-19 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double crystal monochromator' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91837 1.0 2 0.97932 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL9-2 _diffrn_source.type 'SSRL BEAMLINE BL9-2' _diffrn_source.pdbx_wavelength_list 0.91837,0.97932 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3HM4 _reflns.d_resolution_high 1.30 _reflns.d_resolution_low 27.864 _reflns.number_obs 64054 _reflns.pdbx_Rmerge_I_obs 0.029 _reflns.percent_possible_obs 97.000 _reflns.B_iso_Wilson_estimate 12.925 _reflns.observed_criterion_sigma_I -3.00 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 16.900 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.30 1.35 23736 ? 12539 0.525 1.7 ? ? ? ? ? 94.30 1 1 1.35 1.40 21169 ? 11120 0.410 2.2 ? ? ? ? ? 96.20 2 1 1.40 1.46 21720 ? 11396 0.313 2.9 ? ? ? ? ? 96.50 3 1 1.46 1.54 23904 ? 12524 0.206 4.2 ? ? ? ? ? 96.90 4 1 1.54 1.64 24062 ? 12595 0.134 6.3 ? ? ? ? ? 97.20 5 1 1.64 1.76 22180 ? 11570 0.093 9.0 ? ? ? ? ? 97.80 6 1 1.76 1.94 23907 ? 12463 0.051 15.1 ? ? ? ? ? 98.00 7 1 1.94 2.22 23522 ? 12218 0.027 26.5 ? ? ? ? ? 98.10 8 1 2.22 2.80 23864 ? 12343 0.017 38.7 ? ? ? ? ? 98.30 9 1 2.80 27.864 23567 ? 12131 0.010 61.0 ? ? ? ? ? 97.10 10 1 # _refine.entry_id 3HM4 _refine.ls_d_res_high 1.300 _refine.ls_d_res_low 27.864 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 98.150 _refine.ls_number_reflns_obs 63998 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 3. GLYCEROL MOLECULE FROM THE CRYSTALLIZATION SOLUTION IS MODELED. 4. AN UNKNOWN LIGAND (UNL) IS MODELED AT THE NCS TWO-FOLD AXIS. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.139 _refine.ls_R_factor_R_work 0.138 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.165 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 3240 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 18.041 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.830 _refine.aniso_B[2][2] -0.940 _refine.aniso_B[3][3] 0.100 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.977 _refine.correlation_coeff_Fo_to_Fc_free 0.970 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.049 _refine.pdbx_overall_ESU_R_Free 0.046 _refine.overall_SU_ML 0.029 _refine.overall_SU_B 1.515 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 53.10 _refine.B_iso_min 3.59 _refine.occupancy_max 1.00 _refine.occupancy_min 0.15 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2196 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 15 _refine_hist.number_atoms_solvent 312 _refine_hist.number_atoms_total 2523 _refine_hist.d_res_high 1.300 _refine_hist.d_res_low 27.864 # loop_ _refine_ls_restr.type _refine_ls_restr.pdbx_refine_id _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 'X-RAY DIFFRACTION' 2367 0.018 0.022 ? ? r_bond_other_d 'X-RAY DIFFRACTION' 1512 0.003 0.020 ? ? r_angle_refined_deg 'X-RAY DIFFRACTION' 3249 1.745 1.953 ? ? r_angle_other_deg 'X-RAY DIFFRACTION' 3807 1.410 3.000 ? ? r_dihedral_angle_1_deg 'X-RAY DIFFRACTION' 344 5.242 5.000 ? ? r_dihedral_angle_2_deg 'X-RAY DIFFRACTION' 84 29.185 26.905 ? ? r_dihedral_angle_3_deg 'X-RAY DIFFRACTION' 411 10.966 15.000 ? ? r_dihedral_angle_4_deg 'X-RAY DIFFRACTION' 2 12.154 15.000 ? ? r_chiral_restr 'X-RAY DIFFRACTION' 401 0.105 0.200 ? ? r_gen_planes_refined 'X-RAY DIFFRACTION' 2681 0.007 0.021 ? ? r_gen_planes_other 'X-RAY DIFFRACTION' 401 0.002 0.020 ? ? r_mcbond_it 'X-RAY DIFFRACTION' 1566 2.206 2.000 ? ? r_mcbond_other 'X-RAY DIFFRACTION' 641 1.288 2.000 ? ? r_mcangle_it 'X-RAY DIFFRACTION' 2574 3.193 4.000 ? ? r_scbond_it 'X-RAY DIFFRACTION' 801 4.387 6.000 ? ? r_scangle_it 'X-RAY DIFFRACTION' 653 6.267 8.000 ? ? r_rigid_bond_restr 'X-RAY DIFFRACTION' 3879 1.826 3.000 ? ? r_sphericity_free 'X-RAY DIFFRACTION' 321 8.725 3.000 ? ? r_sphericity_bonded 'X-RAY DIFFRACTION' 3824 4.735 3.000 ? ? # _refine_ls_shell.d_res_high 1.300 _refine_ls_shell.d_res_low 1.334 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 94.920 _refine_ls_shell.number_reflns_R_work 4269 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.209 _refine_ls_shell.R_factor_R_free 0.230 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 234 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 4503 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3HM4 _struct.title 'CRYSTAL STRUCTURE OF A CHEMOTAXIS PROTEIN CHEX (DDE_0281) FROM DESULFOVIBRIO DESULFURICANS SUBSP. AT 1.30 A RESOLUTION' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;CHEMOTAXIS PROTEIN CHEX, STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI-2, HYDROLASE ; _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.entry_id 3HM4 # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? # _struct_biol.id 1 _struct_biol.details 'CRYSTAL PACKING ANALYSIS SUGGESTS THE ASSIGNMENT OF A DIMER AS THE SIGNIFICANT OLIGOMERIZATION STATE.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 6 ? GLU A 8 ? GLY A 5 GLU A 7 5 ? 3 HELX_P HELX_P2 2 ILE A 9 ? GLY A 26 ? ILE A 8 GLY A 25 1 ? 18 HELX_P HELX_P3 3 THR A 65 ? GLY A 78 ? THR A 64 GLY A 77 1 ? 14 HELX_P HELX_P4 4 ASP A 83 ? MSE A 110 ? ASP A 82 MSE A 109 1 ? 28 HELX_P HELX_P5 5 ILE B 7 ? ILE B 9 ? ILE B 6 ILE B 8 5 ? 3 HELX_P HELX_P6 6 ALA B 10 ? GLY B 26 ? ALA B 9 GLY B 25 1 ? 17 HELX_P HELX_P7 7 THR B 65 ? LEU B 77 ? THR B 64 LEU B 76 1 ? 13 HELX_P HELX_P8 8 ASP B 83 ? MSE B 110 ? ASP B 82 MSE B 109 1 ? 28 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A THR 23 C ? ? ? 1_555 A MSE 24 N ? ? A THR 22 A MSE 23 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale2 covale both ? A MSE 24 C ? ? ? 1_555 A ALA 25 N ? ? A MSE 23 A ALA 24 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale3 covale both ? A ALA 75 C ? ? ? 1_555 A MSE 76 N ? ? A ALA 74 A MSE 75 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale4 covale both ? A MSE 76 C ? ? ? 1_555 A LEU 77 N ? ? A MSE 75 A LEU 76 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale5 covale both ? A ASN 97 C ? ? ? 1_555 A MSE 98 N ? ? A ASN 96 A MSE 97 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale6 covale both ? A MSE 98 C ? ? ? 1_555 A ILE 99 N ? ? A MSE 97 A ILE 98 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale7 covale both ? A GLU 109 C ? ? ? 1_555 A MSE 110 N ? ? A GLU 108 A MSE 109 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale8 covale both ? A MSE 110 C ? ? ? 1_555 A GLY 111 N ? ? A MSE 109 A GLY 110 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale9 covale both ? A GLY 111 C ? ? ? 1_555 A MSE 112 N ? ? A GLY 110 A MSE 111 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale10 covale both ? A MSE 112 C ? ? ? 1_555 A THR 113 N ? ? A MSE 111 A THR 112 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale11 covale both ? A ILE 122 C ? ? ? 1_555 A MSE 123 N ? ? A ILE 121 A MSE 122 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale12 covale both ? A MSE 123 C ? ? ? 1_555 A GLY 124 N ? ? A MSE 122 A GLY 123 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale13 covale both ? B THR 23 C ? ? ? 1_555 B MSE 24 N ? ? B THR 22 B MSE 23 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale14 covale both ? B MSE 24 C ? ? ? 1_555 B ALA 25 N ? ? B MSE 23 B ALA 24 1_555 ? ? ? ? ? ? ? 1.318 ? ? covale15 covale both ? B ALA 75 C ? ? ? 1_555 B MSE 76 N ? ? B ALA 74 B MSE 75 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale16 covale both ? B MSE 76 C ? ? ? 1_555 B LEU 77 N ? ? B MSE 75 B LEU 76 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale17 covale both ? B ASN 97 C ? ? ? 1_555 B MSE 98 N ? ? B ASN 96 B MSE 97 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale18 covale both ? B MSE 98 C ? ? ? 1_555 B ILE 99 N ? ? B MSE 97 B ILE 98 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale19 covale both ? B GLU 109 C ? ? ? 1_555 B MSE 110 N ? ? B GLU 108 B MSE 109 1_555 ? ? ? ? ? ? ? 1.347 ? ? covale20 covale both ? B MSE 110 C ? ? ? 1_555 B GLY 111 N ? ? B MSE 109 B GLY 110 1_555 ? ? ? ? ? ? ? 1.347 ? ? covale21 covale both ? B GLY 111 C ? ? ? 1_555 B MSE 112 N ? ? B GLY 110 B MSE 111 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale22 covale both ? B MSE 112 C ? ? ? 1_555 B THR 113 N ? ? B MSE 111 B THR 112 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale23 covale both ? B ILE 122 C ? ? ? 1_555 B MSE 123 N ? ? B ILE 121 B MSE 122 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale24 covale both ? B MSE 123 C ? ? ? 1_555 B GLY 124 N ? ? B MSE 122 B GLY 123 1_555 ? ? ? ? ? ? ? 1.308 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A UNL 156 ? 16 'BINDING SITE FOR RESIDUE UNL A 156' AC2 Software A GOL 157 ? 8 'BINDING SITE FOR RESIDUE GOL A 157' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 16 VAL A 49 ? VAL A 48 . ? 1_555 ? 2 AC1 16 VAL A 50 ? VAL A 49 . ? 1_555 ? 3 AC1 16 GLY A 51 ? GLY A 50 . ? 1_555 ? 4 AC1 16 SER A 59 ? SER A 58 . ? 1_555 ? 5 AC1 16 ALA A 117 ? ALA A 116 . ? 1_555 ? 6 AC1 16 THR A 118 ? THR A 117 . ? 1_555 ? 7 AC1 16 PRO A 119 ? PRO A 118 . ? 1_555 ? 8 AC1 16 SER A 120 ? SER A 119 . ? 1_555 ? 9 AC1 16 VAL B 49 ? VAL B 48 . ? 1_555 ? 10 AC1 16 VAL B 50 ? VAL B 49 . ? 1_555 ? 11 AC1 16 GLY B 51 ? GLY B 50 . ? 1_555 ? 12 AC1 16 SER B 59 ? SER B 58 . ? 1_555 ? 13 AC1 16 ALA B 117 ? ALA B 116 . ? 1_555 ? 14 AC1 16 THR B 118 ? THR B 117 . ? 1_555 ? 15 AC1 16 PRO B 119 ? PRO B 118 . ? 1_555 ? 16 AC1 16 SER B 120 ? SER B 119 . ? 1_555 ? 17 AC2 8 LYS A 37 ? LYS A 36 . ? 1_555 ? 18 AC2 8 ALA A 42 ? ALA A 41 . ? 1_555 ? 19 AC2 8 LYS A 43 ? LYS A 42 . ? 1_555 ? 20 AC2 8 THR A 150 ? THR A 149 . ? 1_555 ? 21 AC2 8 GLU A 152 ? GLU A 151 . ? 1_555 ? 22 AC2 8 HOH E . ? HOH A 162 . ? 1_555 ? 23 AC2 8 HOH E . ? HOH A 288 . ? 1_555 ? 24 AC2 8 HOH F . ? HOH B 174 . ? 3_645 ? # _atom_sites.entry_id 3HM4 _atom_sites.fract_transf_matrix[1][1] 0.023606 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013514 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011999 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MSE 2 1 ? ? ? A . n A 1 3 SER 3 2 ? ? ? A . n A 1 4 SER 4 3 3 SER SER A . n A 1 5 SER 5 4 4 SER SER A . n A 1 6 GLY 6 5 5 GLY GLY A . n A 1 7 ILE 7 6 6 ILE ILE A . n A 1 8 GLU 8 7 7 GLU GLU A . n A 1 9 ILE 9 8 8 ILE ILE A . n A 1 10 ALA 10 9 9 ALA ALA A . n A 1 11 LYS 11 10 10 LYS LYS A . n A 1 12 PRO 12 11 11 PRO PRO A . n A 1 13 PHE 13 12 12 PHE PHE A . n A 1 14 VAL 14 13 13 VAL VAL A . n A 1 15 THR 15 14 14 THR THR A . n A 1 16 ALA 16 15 15 ALA ALA A . n A 1 17 THR 17 16 16 THR THR A . n A 1 18 THR 18 17 17 THR THR A . n A 1 19 ASN 19 18 18 ASN ASN A . n A 1 20 VAL 20 19 19 VAL VAL A . n A 1 21 LEU 21 20 20 LEU LEU A . n A 1 22 SER 22 21 21 SER SER A . n A 1 23 THR 23 22 22 THR THR A . n A 1 24 MSE 24 23 23 MSE MSE A . n A 1 25 ALA 25 24 24 ALA ALA A . n A 1 26 GLY 26 25 25 GLY GLY A . n A 1 27 ILE 27 26 26 ILE ILE A . n A 1 28 GLN 28 27 27 GLN GLN A . n A 1 29 PRO 29 28 28 PRO PRO A . n A 1 30 ILE 30 29 29 ILE ILE A . n A 1 31 PRO 31 30 30 PRO PRO A . n A 1 32 GLY 32 31 31 GLY GLY A . n A 1 33 GLN 33 32 32 GLN GLN A . n A 1 34 PRO 34 33 33 PRO PRO A . n A 1 35 TYR 35 34 34 TYR TYR A . n A 1 36 VAL 36 35 35 VAL VAL A . n A 1 37 LYS 37 36 36 LYS LYS A . n A 1 38 LYS 38 37 37 LYS LYS A . n A 1 39 ASN 39 38 38 ASN ASN A . n A 1 40 ASN 40 39 39 ASN ASN A . n A 1 41 VAL 41 40 40 VAL VAL A . n A 1 42 ALA 42 41 41 ALA ALA A . n A 1 43 LYS 43 42 42 LYS LYS A . n A 1 44 GLY 44 43 43 GLY GLY A . n A 1 45 ASP 45 44 44 ASP ASP A . n A 1 46 VAL 46 45 45 VAL VAL A . n A 1 47 SER 47 46 46 SER SER A . n A 1 48 ALA 48 47 47 ALA ALA A . n A 1 49 VAL 49 48 48 VAL VAL A . n A 1 50 VAL 50 49 49 VAL VAL A . n A 1 51 GLY 51 50 50 GLY GLY A . n A 1 52 ILE 52 51 51 ILE ILE A . n A 1 53 THR 53 52 52 THR THR A . n A 1 54 GLY 54 53 53 GLY GLY A . n A 1 55 HIS 55 54 54 HIS HIS A . n A 1 56 LYS 56 55 55 LYS LYS A . n A 1 57 ASN 57 56 56 ASN ASN A . n A 1 58 GLY 58 57 57 GLY GLY A . n A 1 59 SER 59 58 58 SER SER A . n A 1 60 ILE 60 59 59 ILE ILE A . n A 1 61 SER 61 60 60 SER SER A . n A 1 62 VAL 62 61 61 VAL VAL A . n A 1 63 THR 63 62 62 THR THR A . n A 1 64 PHE 64 63 63 PHE PHE A . n A 1 65 THR 65 64 64 THR THR A . n A 1 66 LYS 66 65 65 LYS LYS A . n A 1 67 GLN 67 66 66 GLN GLN A . n A 1 68 CYS 68 67 67 CYS CYS A . n A 1 69 ALA 69 68 68 ALA ALA A . n A 1 70 ILE 70 69 69 ILE ILE A . n A 1 71 ALA 71 70 70 ALA ALA A . n A 1 72 VAL 72 71 71 VAL VAL A . n A 1 73 VAL 73 72 72 VAL VAL A . n A 1 74 LYS 74 73 73 LYS LYS A . n A 1 75 ALA 75 74 74 ALA ALA A . n A 1 76 MSE 76 75 75 MSE MSE A . n A 1 77 LEU 77 76 76 LEU LEU A . n A 1 78 GLY 78 77 77 GLY GLY A . n A 1 79 ASP 79 78 78 ASP ASP A . n A 1 80 ASP 80 79 79 ASP ASP A . n A 1 81 ILE 81 80 80 ILE ILE A . n A 1 82 GLN 82 81 81 GLN GLN A . n A 1 83 ASP 83 82 82 ASP ASP A . n A 1 84 ILE 84 83 83 ILE ILE A . n A 1 85 ILE 85 84 84 ILE ILE A . n A 1 86 GLN 86 85 85 GLN GLN A . n A 1 87 ASP 87 86 86 ASP ASP A . n A 1 88 THR 88 87 87 THR THR A . n A 1 89 LYS 89 88 88 LYS LYS A . n A 1 90 ASP 90 89 89 ASP ASP A . n A 1 91 ALA 91 90 90 ALA ALA A . n A 1 92 VAL 92 91 91 VAL VAL A . n A 1 93 GLY 93 92 92 GLY GLY A . n A 1 94 GLU 94 93 93 GLU GLU A . n A 1 95 VAL 95 94 94 VAL VAL A . n A 1 96 THR 96 95 95 THR THR A . n A 1 97 ASN 97 96 96 ASN ASN A . n A 1 98 MSE 98 97 97 MSE MSE A . n A 1 99 ILE 99 98 98 ILE ILE A . n A 1 100 SER 100 99 99 SER SER A . n A 1 101 GLY 101 100 100 GLY GLY A . n A 1 102 GLN 102 101 101 GLN GLN A . n A 1 103 ALA 103 102 102 ALA ALA A . n A 1 104 ARG 104 103 103 ARG ARG A . n A 1 105 ALA 105 104 104 ALA ALA A . n A 1 106 ALA 106 105 105 ALA ALA A . n A 1 107 LEU 107 106 106 LEU LEU A . n A 1 108 SER 108 107 107 SER SER A . n A 1 109 GLU 109 108 108 GLU GLU A . n A 1 110 MSE 110 109 109 MSE MSE A . n A 1 111 GLY 111 110 110 GLY GLY A . n A 1 112 MSE 112 111 111 MSE MSE A . n A 1 113 THR 113 112 112 THR THR A . n A 1 114 PHE 114 113 113 PHE PHE A . n A 1 115 GLN 115 114 114 GLN GLN A . n A 1 116 GLY 116 115 115 GLY GLY A . n A 1 117 ALA 117 116 116 ALA ALA A . n A 1 118 THR 118 117 117 THR THR A . n A 1 119 PRO 119 118 118 PRO PRO A . n A 1 120 SER 120 119 119 SER SER A . n A 1 121 VAL 121 120 120 VAL VAL A . n A 1 122 ILE 122 121 121 ILE ILE A . n A 1 123 MSE 123 122 122 MSE MSE A . n A 1 124 GLY 124 123 123 GLY GLY A . n A 1 125 ASP 125 124 124 ASP ASP A . n A 1 126 GLY 126 125 125 GLY GLY A . n A 1 127 HIS 127 126 126 HIS HIS A . n A 1 128 THR 128 127 127 THR THR A . n A 1 129 ILE 129 128 128 ILE ILE A . n A 1 130 SER 130 129 129 SER SER A . n A 1 131 HIS 131 130 130 HIS HIS A . n A 1 132 VAL 132 131 131 VAL VAL A . n A 1 133 THR 133 132 132 THR THR A . n A 1 134 LYS 134 133 133 LYS LYS A . n A 1 135 SER 135 134 134 SER SER A . n A 1 136 PRO 136 135 135 PRO PRO A . n A 1 137 VAL 137 136 136 VAL VAL A . n A 1 138 ILE 138 137 137 ILE ILE A . n A 1 139 ALA 139 138 138 ALA ALA A . n A 1 140 ILE 140 139 139 ILE ILE A . n A 1 141 PRO 141 140 140 PRO PRO A . n A 1 142 PHE 142 141 141 PHE PHE A . n A 1 143 LYS 143 142 142 LYS LYS A . n A 1 144 THR 144 143 143 THR THR A . n A 1 145 ASN 145 144 144 ASN ASN A . n A 1 146 HIS 146 145 145 HIS HIS A . n A 1 147 GLY 147 146 146 GLY GLY A . n A 1 148 GLU 148 147 147 GLU GLU A . n A 1 149 PHE 149 148 148 PHE PHE A . n A 1 150 THR 150 149 149 THR THR A . n A 1 151 VAL 151 150 150 VAL VAL A . n A 1 152 GLU 152 151 151 GLU GLU A . n A 1 153 PHE 153 152 152 PHE PHE A . n A 1 154 CYS 154 153 153 CYS CYS A . n A 1 155 LEU 155 154 154 LEU LEU A . n A 1 156 GLU 156 155 155 GLU GLU A . n B 1 1 GLY 1 0 ? ? ? B . n B 1 2 MSE 2 1 ? ? ? B . n B 1 3 SER 3 2 ? ? ? B . n B 1 4 SER 4 3 ? ? ? B . n B 1 5 SER 5 4 ? ? ? B . n B 1 6 GLY 6 5 ? ? ? B . n B 1 7 ILE 7 6 6 ILE ILE B . n B 1 8 GLU 8 7 7 GLU GLU B . n B 1 9 ILE 9 8 8 ILE ILE B . n B 1 10 ALA 10 9 9 ALA ALA B . n B 1 11 LYS 11 10 10 LYS LYS B . n B 1 12 PRO 12 11 11 PRO PRO B . n B 1 13 PHE 13 12 12 PHE PHE B . n B 1 14 VAL 14 13 13 VAL VAL B . n B 1 15 THR 15 14 14 THR THR B . n B 1 16 ALA 16 15 15 ALA ALA B . n B 1 17 THR 17 16 16 THR THR B . n B 1 18 THR 18 17 17 THR THR B . n B 1 19 ASN 19 18 18 ASN ASN B . n B 1 20 VAL 20 19 19 VAL VAL B . n B 1 21 LEU 21 20 20 LEU LEU B . n B 1 22 SER 22 21 21 SER SER B . n B 1 23 THR 23 22 22 THR THR B . n B 1 24 MSE 24 23 23 MSE MSE B . n B 1 25 ALA 25 24 24 ALA ALA B . n B 1 26 GLY 26 25 25 GLY GLY B . n B 1 27 ILE 27 26 26 ILE ILE B . n B 1 28 GLN 28 27 27 GLN GLN B . n B 1 29 PRO 29 28 28 PRO PRO B . n B 1 30 ILE 30 29 29 ILE ILE B . n B 1 31 PRO 31 30 30 PRO PRO B . n B 1 32 GLY 32 31 31 GLY GLY B . n B 1 33 GLN 33 32 32 GLN GLN B . n B 1 34 PRO 34 33 33 PRO PRO B . n B 1 35 TYR 35 34 34 TYR TYR B . n B 1 36 VAL 36 35 35 VAL VAL B . n B 1 37 LYS 37 36 36 LYS LYS B . n B 1 38 LYS 38 37 37 LYS LYS B . n B 1 39 ASN 39 38 38 ASN ASN B . n B 1 40 ASN 40 39 39 ASN ASN B . n B 1 41 VAL 41 40 40 VAL VAL B . n B 1 42 ALA 42 41 41 ALA ALA B . n B 1 43 LYS 43 42 42 LYS LYS B . n B 1 44 GLY 44 43 43 GLY GLY B . n B 1 45 ASP 45 44 44 ASP ASP B . n B 1 46 VAL 46 45 45 VAL VAL B . n B 1 47 SER 47 46 46 SER SER B . n B 1 48 ALA 48 47 47 ALA ALA B . n B 1 49 VAL 49 48 48 VAL VAL B . n B 1 50 VAL 50 49 49 VAL VAL B . n B 1 51 GLY 51 50 50 GLY GLY B . n B 1 52 ILE 52 51 51 ILE ILE B . n B 1 53 THR 53 52 52 THR THR B . n B 1 54 GLY 54 53 53 GLY GLY B . n B 1 55 HIS 55 54 54 HIS HIS B . n B 1 56 LYS 56 55 55 LYS LYS B . n B 1 57 ASN 57 56 56 ASN ASN B . n B 1 58 GLY 58 57 57 GLY GLY B . n B 1 59 SER 59 58 58 SER SER B . n B 1 60 ILE 60 59 59 ILE ILE B . n B 1 61 SER 61 60 60 SER SER B . n B 1 62 VAL 62 61 61 VAL VAL B . n B 1 63 THR 63 62 62 THR THR B . n B 1 64 PHE 64 63 63 PHE PHE B . n B 1 65 THR 65 64 64 THR THR B . n B 1 66 LYS 66 65 65 LYS LYS B . n B 1 67 GLN 67 66 66 GLN GLN B . n B 1 68 CYS 68 67 67 CYS CYS B . n B 1 69 ALA 69 68 68 ALA ALA B . n B 1 70 ILE 70 69 69 ILE ILE B . n B 1 71 ALA 71 70 70 ALA ALA B . n B 1 72 VAL 72 71 71 VAL VAL B . n B 1 73 VAL 73 72 72 VAL VAL B . n B 1 74 LYS 74 73 73 LYS LYS B . n B 1 75 ALA 75 74 74 ALA ALA B . n B 1 76 MSE 76 75 75 MSE MSE B . n B 1 77 LEU 77 76 76 LEU LEU B . n B 1 78 GLY 78 77 77 GLY GLY B . n B 1 79 ASP 79 78 78 ASP ASP B . n B 1 80 ASP 80 79 79 ASP ASP B . n B 1 81 ILE 81 80 80 ILE ILE B . n B 1 82 GLN 82 81 81 GLN GLN B . n B 1 83 ASP 83 82 82 ASP ASP B . n B 1 84 ILE 84 83 83 ILE ILE B . n B 1 85 ILE 85 84 84 ILE ILE B . n B 1 86 GLN 86 85 85 GLN GLN B . n B 1 87 ASP 87 86 86 ASP ASP B . n B 1 88 THR 88 87 87 THR THR B . n B 1 89 LYS 89 88 88 LYS LYS B . n B 1 90 ASP 90 89 89 ASP ASP B . n B 1 91 ALA 91 90 90 ALA ALA B . n B 1 92 VAL 92 91 91 VAL VAL B . n B 1 93 GLY 93 92 92 GLY GLY B . n B 1 94 GLU 94 93 93 GLU GLU B . n B 1 95 VAL 95 94 94 VAL VAL B . n B 1 96 THR 96 95 95 THR THR B . n B 1 97 ASN 97 96 96 ASN ASN B . n B 1 98 MSE 98 97 97 MSE MSE B . n B 1 99 ILE 99 98 98 ILE ILE B . n B 1 100 SER 100 99 99 SER SER B . n B 1 101 GLY 101 100 100 GLY GLY B . n B 1 102 GLN 102 101 101 GLN GLN B . n B 1 103 ALA 103 102 102 ALA ALA B . n B 1 104 ARG 104 103 103 ARG ARG B . n B 1 105 ALA 105 104 104 ALA ALA B . n B 1 106 ALA 106 105 105 ALA ALA B . n B 1 107 LEU 107 106 106 LEU LEU B . n B 1 108 SER 108 107 107 SER SER B . n B 1 109 GLU 109 108 108 GLU GLU B . n B 1 110 MSE 110 109 109 MSE MSE B . n B 1 111 GLY 111 110 110 GLY GLY B . n B 1 112 MSE 112 111 111 MSE MSE B . n B 1 113 THR 113 112 112 THR THR B . n B 1 114 PHE 114 113 113 PHE PHE B . n B 1 115 GLN 115 114 114 GLN GLN B . n B 1 116 GLY 116 115 115 GLY GLY B . n B 1 117 ALA 117 116 116 ALA ALA B . n B 1 118 THR 118 117 117 THR THR B . n B 1 119 PRO 119 118 118 PRO PRO B . n B 1 120 SER 120 119 119 SER SER B . n B 1 121 VAL 121 120 120 VAL VAL B . n B 1 122 ILE 122 121 121 ILE ILE B . n B 1 123 MSE 123 122 122 MSE MSE B . n B 1 124 GLY 124 123 123 GLY GLY B . n B 1 125 ASP 125 124 124 ASP ASP B . n B 1 126 GLY 126 125 125 GLY GLY B . n B 1 127 HIS 127 126 126 HIS HIS B . n B 1 128 THR 128 127 127 THR THR B . n B 1 129 ILE 129 128 128 ILE ILE B . n B 1 130 SER 130 129 129 SER SER B . n B 1 131 HIS 131 130 130 HIS HIS B . n B 1 132 VAL 132 131 131 VAL VAL B . n B 1 133 THR 133 132 132 THR THR B . n B 1 134 LYS 134 133 133 LYS LYS B . n B 1 135 SER 135 134 134 SER SER B . n B 1 136 PRO 136 135 135 PRO PRO B . n B 1 137 VAL 137 136 136 VAL VAL B . n B 1 138 ILE 138 137 137 ILE ILE B . n B 1 139 ALA 139 138 138 ALA ALA B . n B 1 140 ILE 140 139 139 ILE ILE B . n B 1 141 PRO 141 140 140 PRO PRO B . n B 1 142 PHE 142 141 141 PHE PHE B . n B 1 143 LYS 143 142 142 LYS LYS B . n B 1 144 THR 144 143 143 THR THR B . n B 1 145 ASN 145 144 144 ASN ASN B . n B 1 146 HIS 146 145 145 HIS HIS B . n B 1 147 GLY 147 146 146 GLY GLY B . n B 1 148 GLU 148 147 147 GLU GLU B . n B 1 149 PHE 149 148 148 PHE PHE B . n B 1 150 THR 150 149 149 THR THR B . n B 1 151 VAL 151 150 150 VAL VAL B . n B 1 152 GLU 152 151 151 GLU GLU B . n B 1 153 PHE 153 152 152 PHE PHE B . n B 1 154 CYS 154 153 153 CYS CYS B . n B 1 155 LEU 155 154 154 LEU LEU B . n B 1 156 GLU 156 155 155 GLU GLU B . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 UNL 1 156 1 UNL UNL A . D 3 GOL 1 157 2 GOL GOL A . E 4 HOH 1 158 4 HOH HOH A . E 4 HOH 2 159 6 HOH HOH A . E 4 HOH 3 160 160 HOH HOH A . E 4 HOH 4 161 8 HOH HOH A . E 4 HOH 5 162 11 HOH HOH A . E 4 HOH 6 163 163 HOH HOH A . E 4 HOH 7 164 164 HOH HOH A . E 4 HOH 8 165 12 HOH HOH A . E 4 HOH 9 166 14 HOH HOH A . E 4 HOH 10 167 15 HOH HOH A . E 4 HOH 11 168 168 HOH HOH A . E 4 HOH 12 169 169 HOH HOH A . E 4 HOH 13 170 170 HOH HOH A . E 4 HOH 14 171 171 HOH HOH A . E 4 HOH 15 172 16 HOH HOH A . E 4 HOH 16 173 18 HOH HOH A . E 4 HOH 17 174 174 HOH HOH A . E 4 HOH 18 175 175 HOH HOH A . E 4 HOH 19 176 176 HOH HOH A . E 4 HOH 20 177 177 HOH HOH A . E 4 HOH 21 178 19 HOH HOH A . E 4 HOH 22 179 22 HOH HOH A . E 4 HOH 23 180 23 HOH HOH A . E 4 HOH 24 181 181 HOH HOH A . E 4 HOH 25 182 182 HOH HOH A . E 4 HOH 26 183 27 HOH HOH A . E 4 HOH 27 184 184 HOH HOH A . E 4 HOH 28 185 185 HOH HOH A . E 4 HOH 29 186 186 HOH HOH A . E 4 HOH 30 187 187 HOH HOH A . E 4 HOH 31 188 188 HOH HOH A . E 4 HOH 32 189 29 HOH HOH A . E 4 HOH 33 190 190 HOH HOH A . E 4 HOH 34 191 31 HOH HOH A . E 4 HOH 35 192 34 HOH HOH A . E 4 HOH 36 193 193 HOH HOH A . E 4 HOH 37 194 35 HOH HOH A . E 4 HOH 38 195 37 HOH HOH A . E 4 HOH 39 196 39 HOH HOH A . E 4 HOH 40 197 197 HOH HOH A . E 4 HOH 41 198 198 HOH HOH A . E 4 HOH 42 199 42 HOH HOH A . E 4 HOH 43 200 44 HOH HOH A . E 4 HOH 44 201 201 HOH HOH A . E 4 HOH 45 202 202 HOH HOH A . E 4 HOH 46 203 45 HOH HOH A . E 4 HOH 47 204 204 HOH HOH A . E 4 HOH 48 205 205 HOH HOH A . E 4 HOH 49 206 206 HOH HOH A . E 4 HOH 50 207 49 HOH HOH A . E 4 HOH 51 208 208 HOH HOH A . E 4 HOH 52 209 209 HOH HOH A . E 4 HOH 53 210 210 HOH HOH A . E 4 HOH 54 211 50 HOH HOH A . E 4 HOH 55 212 51 HOH HOH A . E 4 HOH 56 213 53 HOH HOH A . E 4 HOH 57 214 214 HOH HOH A . E 4 HOH 58 215 55 HOH HOH A . E 4 HOH 59 216 216 HOH HOH A . E 4 HOH 60 217 58 HOH HOH A . E 4 HOH 61 218 59 HOH HOH A . E 4 HOH 62 219 60 HOH HOH A . E 4 HOH 63 220 61 HOH HOH A . E 4 HOH 64 221 62 HOH HOH A . E 4 HOH 65 222 222 HOH HOH A . E 4 HOH 66 223 64 HOH HOH A . E 4 HOH 67 224 65 HOH HOH A . E 4 HOH 68 225 225 HOH HOH A . E 4 HOH 69 226 226 HOH HOH A . E 4 HOH 70 227 66 HOH HOH A . E 4 HOH 71 228 69 HOH HOH A . E 4 HOH 72 229 70 HOH HOH A . E 4 HOH 73 230 230 HOH HOH A . E 4 HOH 74 231 73 HOH HOH A . E 4 HOH 75 232 232 HOH HOH A . E 4 HOH 76 233 75 HOH HOH A . E 4 HOH 77 234 234 HOH HOH A . E 4 HOH 78 235 77 HOH HOH A . E 4 HOH 79 236 81 HOH HOH A . E 4 HOH 80 237 82 HOH HOH A . E 4 HOH 81 238 238 HOH HOH A . E 4 HOH 82 239 86 HOH HOH A . E 4 HOH 83 240 240 HOH HOH A . E 4 HOH 84 241 91 HOH HOH A . E 4 HOH 85 242 92 HOH HOH A . E 4 HOH 86 243 93 HOH HOH A . E 4 HOH 87 244 94 HOH HOH A . E 4 HOH 88 245 95 HOH HOH A . E 4 HOH 89 246 96 HOH HOH A . E 4 HOH 90 247 247 HOH HOH A . E 4 HOH 91 248 248 HOH HOH A . E 4 HOH 92 249 249 HOH HOH A . E 4 HOH 93 250 250 HOH HOH A . E 4 HOH 94 251 97 HOH HOH A . E 4 HOH 95 252 102 HOH HOH A . E 4 HOH 96 253 104 HOH HOH A . E 4 HOH 97 254 109 HOH HOH A . E 4 HOH 98 255 255 HOH HOH A . E 4 HOH 99 256 110 HOH HOH A . E 4 HOH 100 257 257 HOH HOH A . E 4 HOH 101 258 258 HOH HOH A . E 4 HOH 102 259 111 HOH HOH A . E 4 HOH 103 260 112 HOH HOH A . E 4 HOH 104 261 114 HOH HOH A . E 4 HOH 105 262 118 HOH HOH A . E 4 HOH 106 263 263 HOH HOH A . E 4 HOH 107 264 119 HOH HOH A . E 4 HOH 108 265 120 HOH HOH A . E 4 HOH 109 266 266 HOH HOH A . E 4 HOH 110 267 267 HOH HOH A . E 4 HOH 111 268 268 HOH HOH A . E 4 HOH 112 269 121 HOH HOH A . E 4 HOH 113 270 270 HOH HOH A . E 4 HOH 114 271 125 HOH HOH A . E 4 HOH 115 272 126 HOH HOH A . E 4 HOH 116 273 273 HOH HOH A . E 4 HOH 117 274 127 HOH HOH A . E 4 HOH 118 275 275 HOH HOH A . E 4 HOH 119 276 276 HOH HOH A . E 4 HOH 120 277 277 HOH HOH A . E 4 HOH 121 278 278 HOH HOH A . E 4 HOH 122 279 129 HOH HOH A . E 4 HOH 123 280 131 HOH HOH A . E 4 HOH 124 281 281 HOH HOH A . E 4 HOH 125 282 282 HOH HOH A . E 4 HOH 126 283 132 HOH HOH A . E 4 HOH 127 284 284 HOH HOH A . E 4 HOH 128 285 135 HOH HOH A . E 4 HOH 129 286 286 HOH HOH A . E 4 HOH 130 287 136 HOH HOH A . E 4 HOH 131 288 288 HOH HOH A . E 4 HOH 132 289 140 HOH HOH A . E 4 HOH 133 290 290 HOH HOH A . E 4 HOH 134 291 291 HOH HOH A . E 4 HOH 135 292 292 HOH HOH A . E 4 HOH 136 293 148 HOH HOH A . E 4 HOH 137 294 294 HOH HOH A . E 4 HOH 138 295 149 HOH HOH A . E 4 HOH 139 296 150 HOH HOH A . E 4 HOH 140 297 297 HOH HOH A . E 4 HOH 141 298 298 HOH HOH A . E 4 HOH 142 299 299 HOH HOH A . E 4 HOH 143 300 153 HOH HOH A . E 4 HOH 144 301 301 HOH HOH A . E 4 HOH 145 302 156 HOH HOH A . E 4 HOH 146 304 304 HOH HOH A . E 4 HOH 147 306 306 HOH HOH A . E 4 HOH 148 308 308 HOH HOH A . E 4 HOH 149 309 309 HOH HOH A . E 4 HOH 150 311 311 HOH HOH A . E 4 HOH 151 314 314 HOH HOH A . F 4 HOH 1 156 3 HOH HOH B . F 4 HOH 2 157 157 HOH HOH B . F 4 HOH 3 158 158 HOH HOH B . F 4 HOH 4 159 159 HOH HOH B . F 4 HOH 5 160 5 HOH HOH B . F 4 HOH 6 161 161 HOH HOH B . F 4 HOH 7 162 162 HOH HOH B . F 4 HOH 8 163 7 HOH HOH B . F 4 HOH 9 164 9 HOH HOH B . F 4 HOH 10 165 165 HOH HOH B . F 4 HOH 11 166 166 HOH HOH B . F 4 HOH 12 167 167 HOH HOH B . F 4 HOH 13 168 10 HOH HOH B . F 4 HOH 14 169 13 HOH HOH B . F 4 HOH 15 170 17 HOH HOH B . F 4 HOH 16 171 20 HOH HOH B . F 4 HOH 17 172 172 HOH HOH B . F 4 HOH 18 173 173 HOH HOH B . F 4 HOH 19 174 21 HOH HOH B . F 4 HOH 20 175 24 HOH HOH B . F 4 HOH 21 176 25 HOH HOH B . F 4 HOH 22 177 26 HOH HOH B . F 4 HOH 23 178 178 HOH HOH B . F 4 HOH 24 179 179 HOH HOH B . F 4 HOH 25 180 180 HOH HOH B . F 4 HOH 26 181 28 HOH HOH B . F 4 HOH 27 182 30 HOH HOH B . F 4 HOH 28 183 183 HOH HOH B . F 4 HOH 29 184 32 HOH HOH B . F 4 HOH 30 185 33 HOH HOH B . F 4 HOH 31 186 36 HOH HOH B . F 4 HOH 32 187 38 HOH HOH B . F 4 HOH 33 188 40 HOH HOH B . F 4 HOH 34 189 189 HOH HOH B . F 4 HOH 35 190 41 HOH HOH B . F 4 HOH 36 191 191 HOH HOH B . F 4 HOH 37 192 192 HOH HOH B . F 4 HOH 38 193 43 HOH HOH B . F 4 HOH 39 194 194 HOH HOH B . F 4 HOH 40 195 195 HOH HOH B . F 4 HOH 41 196 196 HOH HOH B . F 4 HOH 42 197 46 HOH HOH B . F 4 HOH 43 198 47 HOH HOH B . F 4 HOH 44 199 199 HOH HOH B . F 4 HOH 45 200 200 HOH HOH B . F 4 HOH 46 201 48 HOH HOH B . F 4 HOH 47 202 52 HOH HOH B . F 4 HOH 48 203 203 HOH HOH B . F 4 HOH 49 204 54 HOH HOH B . F 4 HOH 50 205 56 HOH HOH B . F 4 HOH 51 206 57 HOH HOH B . F 4 HOH 52 207 207 HOH HOH B . F 4 HOH 53 208 63 HOH HOH B . F 4 HOH 54 209 67 HOH HOH B . F 4 HOH 55 210 68 HOH HOH B . F 4 HOH 56 211 211 HOH HOH B . F 4 HOH 57 212 212 HOH HOH B . F 4 HOH 58 213 213 HOH HOH B . F 4 HOH 59 214 71 HOH HOH B . F 4 HOH 60 215 215 HOH HOH B . F 4 HOH 61 216 72 HOH HOH B . F 4 HOH 62 217 217 HOH HOH B . F 4 HOH 63 218 218 HOH HOH B . F 4 HOH 64 219 219 HOH HOH B . F 4 HOH 65 220 220 HOH HOH B . F 4 HOH 66 221 221 HOH HOH B . F 4 HOH 67 222 74 HOH HOH B . F 4 HOH 68 223 223 HOH HOH B . F 4 HOH 69 224 224 HOH HOH B . F 4 HOH 70 225 76 HOH HOH B . F 4 HOH 71 226 78 HOH HOH B . F 4 HOH 72 227 227 HOH HOH B . F 4 HOH 73 228 228 HOH HOH B . F 4 HOH 74 229 229 HOH HOH B . F 4 HOH 75 230 79 HOH HOH B . F 4 HOH 76 231 231 HOH HOH B . F 4 HOH 77 232 80 HOH HOH B . F 4 HOH 78 233 233 HOH HOH B . F 4 HOH 79 234 83 HOH HOH B . F 4 HOH 80 235 235 HOH HOH B . F 4 HOH 81 236 236 HOH HOH B . F 4 HOH 82 237 237 HOH HOH B . F 4 HOH 83 238 84 HOH HOH B . F 4 HOH 84 239 239 HOH HOH B . F 4 HOH 85 240 85 HOH HOH B . F 4 HOH 86 241 241 HOH HOH B . F 4 HOH 87 242 242 HOH HOH B . F 4 HOH 88 243 243 HOH HOH B . F 4 HOH 89 244 244 HOH HOH B . F 4 HOH 90 245 245 HOH HOH B . F 4 HOH 91 246 246 HOH HOH B . F 4 HOH 92 247 87 HOH HOH B . F 4 HOH 93 248 88 HOH HOH B . F 4 HOH 94 249 89 HOH HOH B . F 4 HOH 95 250 90 HOH HOH B . F 4 HOH 96 251 251 HOH HOH B . F 4 HOH 97 252 252 HOH HOH B . F 4 HOH 98 253 253 HOH HOH B . F 4 HOH 99 254 254 HOH HOH B . F 4 HOH 100 255 98 HOH HOH B . F 4 HOH 101 256 256 HOH HOH B . F 4 HOH 102 257 99 HOH HOH B . F 4 HOH 103 258 100 HOH HOH B . F 4 HOH 104 259 259 HOH HOH B . F 4 HOH 105 260 260 HOH HOH B . F 4 HOH 106 261 261 HOH HOH B . F 4 HOH 107 262 262 HOH HOH B . F 4 HOH 108 263 101 HOH HOH B . F 4 HOH 109 264 264 HOH HOH B . F 4 HOH 110 265 265 HOH HOH B . F 4 HOH 111 266 103 HOH HOH B . F 4 HOH 112 267 105 HOH HOH B . F 4 HOH 113 268 106 HOH HOH B . F 4 HOH 114 269 269 HOH HOH B . F 4 HOH 115 270 107 HOH HOH B . F 4 HOH 116 271 271 HOH HOH B . F 4 HOH 117 272 272 HOH HOH B . F 4 HOH 118 273 108 HOH HOH B . F 4 HOH 119 274 274 HOH HOH B . F 4 HOH 120 275 113 HOH HOH B . F 4 HOH 121 276 115 HOH HOH B . F 4 HOH 122 277 116 HOH HOH B . F 4 HOH 123 278 117 HOH HOH B . F 4 HOH 124 279 279 HOH HOH B . F 4 HOH 125 280 280 HOH HOH B . F 4 HOH 126 281 122 HOH HOH B . F 4 HOH 127 282 123 HOH HOH B . F 4 HOH 128 283 283 HOH HOH B . F 4 HOH 129 284 124 HOH HOH B . F 4 HOH 130 285 285 HOH HOH B . F 4 HOH 131 286 128 HOH HOH B . F 4 HOH 132 287 287 HOH HOH B . F 4 HOH 133 288 130 HOH HOH B . F 4 HOH 134 289 289 HOH HOH B . F 4 HOH 135 290 133 HOH HOH B . F 4 HOH 136 291 134 HOH HOH B . F 4 HOH 137 292 137 HOH HOH B . F 4 HOH 138 293 293 HOH HOH B . F 4 HOH 139 294 138 HOH HOH B . F 4 HOH 140 295 295 HOH HOH B . F 4 HOH 141 296 296 HOH HOH B . F 4 HOH 142 297 139 HOH HOH B . F 4 HOH 143 298 141 HOH HOH B . F 4 HOH 144 299 142 HOH HOH B . F 4 HOH 145 300 300 HOH HOH B . F 4 HOH 146 301 143 HOH HOH B . F 4 HOH 147 302 302 HOH HOH B . F 4 HOH 148 303 303 HOH HOH B . F 4 HOH 149 304 144 HOH HOH B . F 4 HOH 150 305 305 HOH HOH B . F 4 HOH 151 306 145 HOH HOH B . F 4 HOH 152 307 307 HOH HOH B . F 4 HOH 153 308 146 HOH HOH B . F 4 HOH 154 309 147 HOH HOH B . F 4 HOH 155 310 310 HOH HOH B . F 4 HOH 156 311 151 HOH HOH B . F 4 HOH 157 312 312 HOH HOH B . F 4 HOH 158 313 313 HOH HOH B . F 4 HOH 159 314 152 HOH HOH B . F 4 HOH 160 315 154 HOH HOH B . F 4 HOH 161 316 155 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 24 A MSE 23 ? MET SELENOMETHIONINE 2 A MSE 76 A MSE 75 ? MET SELENOMETHIONINE 3 A MSE 98 A MSE 97 ? MET SELENOMETHIONINE 4 A MSE 110 A MSE 109 ? MET SELENOMETHIONINE 5 A MSE 112 A MSE 111 ? MET SELENOMETHIONINE 6 A MSE 123 A MSE 122 ? MET SELENOMETHIONINE 7 B MSE 24 B MSE 23 ? MET SELENOMETHIONINE 8 B MSE 76 B MSE 75 ? MET SELENOMETHIONINE 9 B MSE 98 B MSE 97 ? MET SELENOMETHIONINE 10 B MSE 110 B MSE 109 ? MET SELENOMETHIONINE 11 B MSE 112 B MSE 111 ? MET SELENOMETHIONINE 12 B MSE 123 B MSE 122 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3140 ? 1 MORE -12 ? 1 'SSA (A^2)' 12240 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-06-23 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 4 'Structure model' 1 3 2019-07-24 5 'Structure model' 1 4 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Non-polymer description' 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Refinement description' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' software 3 4 'Structure model' struct_conn 4 5 'Structure model' database_2 5 5 'Structure model' struct_ref_seq_dif 6 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_software.classification' 4 4 'Structure model' '_software.contact_author' 5 4 'Structure model' '_software.contact_author_email' 6 4 'Structure model' '_software.language' 7 4 'Structure model' '_software.location' 8 4 'Structure model' '_software.name' 9 4 'Structure model' '_software.type' 10 4 'Structure model' '_software.version' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_struct_ref_seq_dif.details' 15 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 16 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 17 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.5.0053 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 5 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 XDS . ? ? ? ? 'data reduction' ? ? ? 7 SHELXD . ? ? ? ? phasing ? ? ? 8 autoSHARP . ? ? ? ? phasing ? ? ? 9 # _pdbx_entry_details.entry_id 3HM4 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;SEQUENCE THIS CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CG _pdbx_validate_rmsd_angle.auth_asym_id_1 B _pdbx_validate_rmsd_angle.auth_comp_id_1 MSE _pdbx_validate_rmsd_angle.auth_seq_id_1 109 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 B _pdbx_validate_rmsd_angle.auth_atom_id_2 SE _pdbx_validate_rmsd_angle.auth_asym_id_2 B _pdbx_validate_rmsd_angle.auth_comp_id_2 MSE _pdbx_validate_rmsd_angle.auth_seq_id_2 109 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 B _pdbx_validate_rmsd_angle.auth_atom_id_3 CE _pdbx_validate_rmsd_angle.auth_asym_id_3 B _pdbx_validate_rmsd_angle.auth_comp_id_3 MSE _pdbx_validate_rmsd_angle.auth_seq_id_3 109 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 B _pdbx_validate_rmsd_angle.angle_value 114.60 _pdbx_validate_rmsd_angle.angle_target_value 98.90 _pdbx_validate_rmsd_angle.angle_deviation 15.70 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.20 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP B 79 ? ? -102.87 64.08 2 1 ASP B 79 ? ? -104.92 67.12 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 10 ? CD ? A LYS 11 CD 2 1 Y 1 A LYS 10 ? CE ? A LYS 11 CE 3 1 Y 1 A LYS 10 ? NZ ? A LYS 11 NZ 4 1 Y 1 A ASP 78 ? CG ? A ASP 79 CG 5 1 Y 1 A ASP 78 ? OD1 ? A ASP 79 OD1 6 1 Y 1 A ASP 78 ? OD2 ? A ASP 79 OD2 7 1 Y 1 A LYS 133 ? CG ? A LYS 134 CG 8 1 Y 1 A LYS 133 ? CD ? A LYS 134 CD 9 1 Y 1 A LYS 133 ? CE ? A LYS 134 CE 10 1 Y 1 A LYS 133 ? NZ ? A LYS 134 NZ 11 1 Y 1 B LYS 37 ? CD ? B LYS 38 CD 12 1 Y 1 B LYS 37 ? CE ? B LYS 38 CE 13 1 Y 1 B LYS 37 ? NZ ? B LYS 38 NZ 14 1 Y 1 B ASP 78 ? CG ? B ASP 79 CG 15 1 Y 1 B ASP 78 ? OD1 ? B ASP 79 OD1 16 1 Y 1 B ASP 78 ? OD2 ? B ASP 79 OD2 17 1 Y 1 B LYS 133 ? CE ? B LYS 134 CE 18 1 Y 1 B LYS 133 ? NZ ? B LYS 134 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A MSE 1 ? A MSE 2 3 1 Y 1 A SER 2 ? A SER 3 4 1 Y 1 B GLY 0 ? B GLY 1 5 1 Y 1 B MSE 1 ? B MSE 2 6 1 Y 1 B SER 2 ? B SER 3 7 1 Y 1 B SER 3 ? B SER 4 8 1 Y 1 B SER 4 ? B SER 5 9 1 Y 1 B GLY 5 ? B GLY 6 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'UNKNOWN LIGAND' UNL 3 GLYCEROL GOL 4 water HOH #