HEADER OXIDOREDUCTASE 29-MAY-09 3HML TITLE CRYSTAL STRUCTURE OF PQQC ACTIVE SITE MUTANT H154S IN COMPLEX WITH PQQ COMPND MOL_ID: 1; COMPND 2 MOLECULE: PYRROLOQUINOLINE-QUINONE SYNTHASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PQQC, COENZYME PQQ SYNTHESIS PROTEIN C, PYRROLOQUINOLINE COMPND 5 QUINONE BIOSYNTHESIS PROTEIN C; COMPND 6 EC: 1.3.3.11; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: KLEBSIELLA PNEUMONIAE SUBSP. PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 272620; SOURCE 4 STRAIN: MGH 78578; SOURCE 5 GENE: PQQC; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS PQQC, PQQ BIOSYNTHESIS, OXIDASE, COMPLEX, ALL HELICAL, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR S.PUEHRINGER,R.SCHWARZENBACHER REVDAT 4 01-NOV-23 3HML 1 REMARK SEQADV REVDAT 3 04-OCT-17 3HML 1 REMARK REVDAT 2 14-JUL-10 3HML 1 JRNL REVDAT 1 12-MAY-10 3HML 0 JRNL AUTH S.PUEHRINGER,J.ROSEFIGURA,M.METLITZKY,H.TOYAMA,J.P.KLINMAN, JRNL AUTH 2 R.SCHWARZENBACHER JRNL TITL STRUCTURAL STUDIES OF MUTANT FORMS OF THE PQQ-FORMING ENZYME JRNL TITL 2 PQQC IN THE PRESENCE OF PRODUCT AND SUBSTRATE JRNL REF PROTEINS V. 78 2554 2010 JRNL REFN ISSN 0887-3585 JRNL PMID 20602352 JRNL DOI 10.1002/PROT.22769 REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.37 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 25842 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1311 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.35 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.41 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1700 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.77 REMARK 3 BIN R VALUE (WORKING SET) : 0.3250 REMARK 3 BIN FREE R VALUE SET COUNT : 88 REMARK 3 BIN FREE R VALUE : 0.4450 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3856 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 48 REMARK 3 SOLVENT ATOMS : 57 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.31000 REMARK 3 B22 (A**2) : -0.03000 REMARK 3 B33 (A**2) : 0.35000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.347 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.252 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.191 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 15.963 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.921 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4049 ; 0.018 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5505 ; 1.696 ; 1.938 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 471 ; 6.597 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 211 ;32.308 ;22.749 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 644 ;16.905 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 37 ;17.059 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 565 ; 0.107 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3177 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1853 ; 0.210 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2719 ; 0.300 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 155 ; 0.159 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 31 ; 0.209 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 11 ; 0.166 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2449 ; 0.949 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3780 ; 1.533 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2032 ; 2.121 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1722 ; 3.071 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3HML COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-JUN-09. REMARK 100 THE DEPOSITION ID IS D_1000053318. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-OCT-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8148 REMARK 200 MONOCHROMATOR : GE TRIANGULAR BENT COMPRESSING 7 REMARK 200 FANKUCHEN CUT REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR555 FLAT PANEL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.2.25 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25868 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 39.440 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.10700 REMARK 200 R SYM (I) : 0.09900 REMARK 200 FOR THE DATA SET : 13.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.4 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : 0.81200 REMARK 200 R SYM FOR SHELL (I) : 0.73100 REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1OTW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.0M AMMONIUM SULFATE, 0.1M HEPES PH REMARK 280 7.0, 0.5% W/V POLYETHYLENE GLYCOL 8000, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 37.53000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 59.14550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 37.53000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 59.14550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 HIS A 88 REMARK 465 GLY A 89 REMARK 465 GLU A 90 REMARK 465 GLN A 152 REMARK 465 ILE A 153 REMARK 465 SER A 154 REMARK 465 GLN A 155 REMARK 465 SER A 156 REMARK 465 ARG A 157 REMARK 465 LEU A 158 REMARK 465 ASP A 159 REMARK 465 GLN A 182 REMARK 465 ALA A 183 REMARK 465 ASN A 184 REMARK 465 ARG A 185 REMARK 465 HIS A 254 REMARK 465 HIS A 255 REMARK 465 HIS A 256 REMARK 465 HIS A 257 REMARK 465 HIS A 258 REMARK 465 MET B 1 REMARK 465 LEU B 2 REMARK 465 HIS B 88 REMARK 465 GLY B 89 REMARK 465 GLU B 90 REMARK 465 GLN B 152 REMARK 465 ILE B 153 REMARK 465 SER B 154 REMARK 465 GLN B 155 REMARK 465 SER B 156 REMARK 465 ARG B 157 REMARK 465 LEU B 158 REMARK 465 ASP B 159 REMARK 465 GLN B 182 REMARK 465 ALA B 183 REMARK 465 ASN B 184 REMARK 465 ARG B 185 REMARK 465 HIS B 254 REMARK 465 HIS B 255 REMARK 465 HIS B 256 REMARK 465 HIS B 257 REMARK 465 HIS B 258 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 193 CA - CB - CG ANGL. DEV. = 15.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU B 180 68.86 -57.70 REMARK 500 GLU B 188 5.71 -57.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PQQ A 259 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PQQ B 259 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1OTW RELATED DB: PDB REMARK 900 PQQC IN COMPLEX WITH PQQ REMARK 900 RELATED ID: 1OTV RELATED DB: PDB REMARK 900 PQQC REMARK 900 RELATED ID: 3HLX RELATED DB: PDB REMARK 900 PQQC Y175F MUTANT IN COMPLEX WITH PQQ REMARK 900 RELATED ID: 3HNH RELATED DB: PDB REMARK 900 PQQC Y175S,R179S MUTANT IN COMPLEX WITH A REACTION INTERMEDIATE DBREF 3HML A 1 251 UNP A6T9H1 PQQC_KLEP7 1 251 DBREF 3HML B 1 251 UNP A6T9H1 PQQC_KLEP7 1 251 SEQADV 3HML SER A 154 UNP A6T9H1 HIS 154 ENGINEERED MUTATION SEQADV 3HML LEU A 252 UNP A6T9H1 EXPRESSION TAG SEQADV 3HML GLU A 253 UNP A6T9H1 EXPRESSION TAG SEQADV 3HML HIS A 254 UNP A6T9H1 EXPRESSION TAG SEQADV 3HML HIS A 255 UNP A6T9H1 EXPRESSION TAG SEQADV 3HML HIS A 256 UNP A6T9H1 EXPRESSION TAG SEQADV 3HML HIS A 257 UNP A6T9H1 EXPRESSION TAG SEQADV 3HML HIS A 258 UNP A6T9H1 EXPRESSION TAG SEQADV 3HML SER B 154 UNP A6T9H1 HIS 154 ENGINEERED MUTATION SEQADV 3HML LEU B 252 UNP A6T9H1 EXPRESSION TAG SEQADV 3HML GLU B 253 UNP A6T9H1 EXPRESSION TAG SEQADV 3HML HIS B 254 UNP A6T9H1 EXPRESSION TAG SEQADV 3HML HIS B 255 UNP A6T9H1 EXPRESSION TAG SEQADV 3HML HIS B 256 UNP A6T9H1 EXPRESSION TAG SEQADV 3HML HIS B 257 UNP A6T9H1 EXPRESSION TAG SEQADV 3HML HIS B 258 UNP A6T9H1 EXPRESSION TAG SEQRES 1 A 258 MET LEU ILE THR ASP THR LEU SER PRO GLN ALA PHE GLU SEQRES 2 A 258 GLU ALA LEU ARG ALA LYS GLY ASP PHE TYR HIS ILE HIS SEQRES 3 A 258 HIS PRO TYR HIS ILE ALA MET HIS ASN GLY ASN ALA THR SEQRES 4 A 258 ARG GLU GLN ILE GLN GLY TRP VAL ALA ASN ARG PHE TYR SEQRES 5 A 258 TYR GLN THR THR ILE PRO LEU LYS ASP ALA ALA ILE MET SEQRES 6 A 258 ALA ASN CYS PRO ASP ALA GLN THR ARG ARG LYS TRP VAL SEQRES 7 A 258 GLN ARG ILE LEU ASP HIS ASP GLY SER HIS GLY GLU ASP SEQRES 8 A 258 GLY GLY ILE GLU ALA TRP LEU ARG LEU GLY GLU ALA VAL SEQRES 9 A 258 GLY LEU SER ARG ASP ASP LEU LEU SER GLU ARG HIS VAL SEQRES 10 A 258 LEU PRO GLY VAL ARG PHE ALA VAL ASP ALA TYR LEU ASN SEQRES 11 A 258 PHE ALA ARG ARG ALA CYS TRP GLN GLU ALA ALA CYS SER SEQRES 12 A 258 SER LEU THR GLU LEU PHE ALA PRO GLN ILE SER GLN SER SEQRES 13 A 258 ARG LEU ASP SER TRP PRO GLN HIS TYR PRO TRP ILE LYS SEQRES 14 A 258 GLU GLU GLY TYR PHE TYR PHE ARG SER ARG LEU SER GLN SEQRES 15 A 258 ALA ASN ARG ASP VAL GLU HIS GLY LEU ALA LEU ALA LYS SEQRES 16 A 258 ALA TYR CYS ASP SER ALA GLU LYS GLN ASN ARG MET LEU SEQRES 17 A 258 GLU ILE LEU GLN PHE LYS LEU ASP ILE LEU TRP SER MET SEQRES 18 A 258 LEU ASP ALA MET THR MET ALA TYR ALA LEU GLN ARG PRO SEQRES 19 A 258 PRO TYR HIS THR VAL THR ASP LYS ALA ALA TRP HIS THR SEQRES 20 A 258 THR ARG LEU VAL LEU GLU HIS HIS HIS HIS HIS SEQRES 1 B 258 MET LEU ILE THR ASP THR LEU SER PRO GLN ALA PHE GLU SEQRES 2 B 258 GLU ALA LEU ARG ALA LYS GLY ASP PHE TYR HIS ILE HIS SEQRES 3 B 258 HIS PRO TYR HIS ILE ALA MET HIS ASN GLY ASN ALA THR SEQRES 4 B 258 ARG GLU GLN ILE GLN GLY TRP VAL ALA ASN ARG PHE TYR SEQRES 5 B 258 TYR GLN THR THR ILE PRO LEU LYS ASP ALA ALA ILE MET SEQRES 6 B 258 ALA ASN CYS PRO ASP ALA GLN THR ARG ARG LYS TRP VAL SEQRES 7 B 258 GLN ARG ILE LEU ASP HIS ASP GLY SER HIS GLY GLU ASP SEQRES 8 B 258 GLY GLY ILE GLU ALA TRP LEU ARG LEU GLY GLU ALA VAL SEQRES 9 B 258 GLY LEU SER ARG ASP ASP LEU LEU SER GLU ARG HIS VAL SEQRES 10 B 258 LEU PRO GLY VAL ARG PHE ALA VAL ASP ALA TYR LEU ASN SEQRES 11 B 258 PHE ALA ARG ARG ALA CYS TRP GLN GLU ALA ALA CYS SER SEQRES 12 B 258 SER LEU THR GLU LEU PHE ALA PRO GLN ILE SER GLN SER SEQRES 13 B 258 ARG LEU ASP SER TRP PRO GLN HIS TYR PRO TRP ILE LYS SEQRES 14 B 258 GLU GLU GLY TYR PHE TYR PHE ARG SER ARG LEU SER GLN SEQRES 15 B 258 ALA ASN ARG ASP VAL GLU HIS GLY LEU ALA LEU ALA LYS SEQRES 16 B 258 ALA TYR CYS ASP SER ALA GLU LYS GLN ASN ARG MET LEU SEQRES 17 B 258 GLU ILE LEU GLN PHE LYS LEU ASP ILE LEU TRP SER MET SEQRES 18 B 258 LEU ASP ALA MET THR MET ALA TYR ALA LEU GLN ARG PRO SEQRES 19 B 258 PRO TYR HIS THR VAL THR ASP LYS ALA ALA TRP HIS THR SEQRES 20 B 258 THR ARG LEU VAL LEU GLU HIS HIS HIS HIS HIS HET PQQ A 259 24 HET PQQ B 259 24 HETNAM PQQ PYRROLOQUINOLINE QUINONE FORMUL 3 PQQ 2(C14 H6 N2 O8) FORMUL 5 HOH *57(H2 O) HELIX 1 1 SER A 8 ALA A 18 1 11 HELIX 2 2 LYS A 19 HIS A 26 5 8 HELIX 3 3 HIS A 27 ASN A 35 1 9 HELIX 4 4 THR A 39 ALA A 66 1 28 HELIX 5 5 ASP A 70 GLY A 86 1 17 HELIX 6 6 GLY A 92 GLY A 105 1 14 HELIX 7 7 SER A 107 GLU A 114 1 8 HELIX 8 8 LEU A 118 ALA A 135 1 18 HELIX 9 9 CYS A 136 SER A 143 1 8 HELIX 10 10 SER A 144 ALA A 150 5 7 HELIX 11 11 SER A 160 TYR A 165 1 6 HELIX 12 12 LYS A 169 SER A 181 1 13 HELIX 13 13 ASP A 186 CYS A 198 1 13 HELIX 14 14 SER A 200 ALA A 230 1 31 HELIX 15 15 SER B 8 ALA B 18 1 11 HELIX 16 16 LYS B 19 HIS B 26 5 8 HELIX 17 17 HIS B 27 ASN B 35 1 9 HELIX 18 18 THR B 39 ALA B 66 1 28 HELIX 19 19 ASP B 70 GLY B 86 1 17 HELIX 20 20 GLY B 92 VAL B 104 1 13 HELIX 21 21 SER B 107 GLU B 114 1 8 HELIX 22 22 LEU B 118 ALA B 135 1 18 HELIX 23 23 CYS B 136 SER B 144 1 9 HELIX 24 24 LEU B 145 PHE B 149 5 5 HELIX 25 25 SER B 160 TYR B 165 1 6 HELIX 26 26 LYS B 169 LEU B 180 1 12 HELIX 27 27 ASP B 186 LEU B 191 1 6 HELIX 28 28 LEU B 193 CYS B 198 1 6 HELIX 29 29 SER B 200 ALA B 230 1 31 CISPEP 1 ASP A 91 GLY A 92 0 14.47 SITE 1 AC1 13 TYR A 23 HIS A 24 ARG A 50 TYR A 53 SITE 2 AC1 13 LYS A 60 HIS A 84 TYR A 128 SER A 144 SITE 3 AC1 13 THR A 146 GLU A 147 LYS A 214 LEU A 218 SITE 4 AC1 13 HOH A 269 SITE 1 AC2 13 TYR B 23 HIS B 24 ARG B 50 TYR B 53 SITE 2 AC2 13 GLN B 54 LYS B 60 HIS B 84 TYR B 128 SITE 3 AC2 13 SER B 144 THR B 146 GLU B 147 LYS B 214 SITE 4 AC2 13 LEU B 218 CRYST1 75.060 118.291 68.040 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013323 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008454 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014697 0.00000