HEADER TOXIN 01-JUN-09 3HO6 TITLE STRUCTURE-FUNCTION ANALYSIS OF INOSITOL HEXAKISPHOSPHATE-INDUCED TITLE 2 AUTOPROCESSING IN CLOSTRIDIUM DIFFICILE TOXIN A COMPND MOL_ID: 1; COMPND 2 MOLECULE: TOXIN A; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 543-809; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM DIFFICILE; SOURCE 3 ORGANISM_TAXID: 1496; SOURCE 4 GENE: TCDA, TOXA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21.DE3; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET27 KEYWDS INOSITOL PHOSPHATE, ENTEROTOXIN, TOXIN EXPDTA X-RAY DIFFRACTION AUTHOR R.N.PRUITT,D.B.LACY REVDAT 4 21-FEB-24 3HO6 1 REMARK REVDAT 3 14-OCT-20 3HO6 1 REMARK HETSYN REVDAT 2 08-SEP-09 3HO6 1 JRNL REVDAT 1 23-JUN-09 3HO6 0 JRNL AUTH R.N.PRUITT,B.CHAGOT,M.COVER,W.J.CHAZIN,B.SPILLER,D.B.LACY JRNL TITL STRUCTURE-FUNCTION ANALYSIS OF INOSITOL JRNL TITL 2 HEXAKISPHOSPHATE-INDUCED AUTOPROCESSING IN CLOSTRIDIUM JRNL TITL 3 DIFFICILE TOXIN A. JRNL REF J.BIOL.CHEM. V. 284 21934 2009 JRNL REFN ISSN 0021-9258 JRNL PMID 19553670 JRNL DOI 10.1074/JBC.M109.018929 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.50 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 3 NUMBER OF REFLECTIONS : 68090 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.198 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 3440 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.5080 - 4.6613 0.95 2727 130 0.1650 0.1902 REMARK 3 2 4.6613 - 3.7017 0.98 2686 144 0.1360 0.1606 REMARK 3 3 3.7017 - 3.2343 0.99 2712 158 0.1433 0.1651 REMARK 3 4 3.2343 - 2.9388 0.99 2682 152 0.1606 0.1999 REMARK 3 5 2.9388 - 2.7283 0.99 2680 141 0.1617 0.1876 REMARK 3 6 2.7283 - 2.5675 0.99 2715 133 0.1643 0.2296 REMARK 3 7 2.5675 - 2.4390 0.99 2689 121 0.1587 0.2048 REMARK 3 8 2.4390 - 2.3329 0.99 2672 149 0.1555 0.1935 REMARK 3 9 2.3329 - 2.2431 0.99 2656 129 0.1577 0.2296 REMARK 3 10 2.2431 - 2.1657 0.99 2630 165 0.1647 0.1818 REMARK 3 11 2.1657 - 2.0980 0.98 2643 145 0.1599 0.1953 REMARK 3 12 2.0980 - 2.0380 0.98 2675 134 0.1597 0.2013 REMARK 3 13 2.0380 - 1.9844 0.98 2612 156 0.1650 0.2229 REMARK 3 14 1.9844 - 1.9360 0.98 2632 143 0.1645 0.2174 REMARK 3 15 1.9360 - 1.8920 0.98 2610 134 0.1614 0.2112 REMARK 3 16 1.8920 - 1.8517 0.98 2655 129 0.1628 0.1762 REMARK 3 17 1.8517 - 1.8147 0.98 2603 138 0.1690 0.2037 REMARK 3 18 1.8147 - 1.7804 0.98 2625 148 0.1718 0.2004 REMARK 3 19 1.7804 - 1.7486 0.97 2578 135 0.1729 0.2266 REMARK 3 20 1.7486 - 1.7190 0.96 2599 129 0.1872 0.2447 REMARK 3 21 1.7190 - 1.6913 0.95 2567 136 0.2028 0.2240 REMARK 3 22 1.6913 - 1.6653 0.93 2485 139 0.2122 0.2626 REMARK 3 23 1.6653 - 1.6408 0.90 2416 141 0.2160 0.2000 REMARK 3 24 1.6408 - 1.6177 0.88 2356 117 0.2219 0.2703 REMARK 3 25 1.6177 - 1.6000 0.65 1745 94 0.2358 0.3024 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.40 REMARK 3 B_SOL : 67.62 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.550 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.000 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 8145 REMARK 3 ANGLE : 1.234 14761 REMARK 3 CHIRALITY : 0.077 623 REMARK 3 PLANARITY : 0.005 1270 REMARK 3 DIHEDRAL : 14.854 2180 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 5:10) REMARK 3 ORIGIN FOR THE GROUP (A): 50.8030 22.2999 18.7084 REMARK 3 T TENSOR REMARK 3 T11: 0.2987 T22: 0.5277 REMARK 3 T33: 0.3754 T12: 0.1309 REMARK 3 T13: 0.0400 T23: 0.0472 REMARK 3 L TENSOR REMARK 3 L11: 1.2182 L22: 0.5847 REMARK 3 L33: 0.5179 L12: -1.1709 REMARK 3 L13: -2.2446 L23: 0.4774 REMARK 3 S TENSOR REMARK 3 S11: 0.3161 S12: -0.2335 S13: 0.2639 REMARK 3 S21: 0.2490 S22: -0.2502 S23: 0.0059 REMARK 3 S31: -0.1151 S32: -0.5770 S33: 0.0274 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 11:113) REMARK 3 ORIGIN FOR THE GROUP (A): 68.2723 12.8684 12.9951 REMARK 3 T TENSOR REMARK 3 T11: 0.2120 T22: 0.1449 REMARK 3 T33: 0.1875 T12: 0.0078 REMARK 3 T13: 0.0345 T23: 0.0000 REMARK 3 L TENSOR REMARK 3 L11: 0.9503 L22: 0.9805 REMARK 3 L33: 2.2255 L12: 0.1301 REMARK 3 L13: -0.4373 L23: 0.1911 REMARK 3 S TENSOR REMARK 3 S11: 0.0321 S12: 0.0523 S13: 0.1068 REMARK 3 S21: -0.1662 S22: 0.0452 S23: -0.0909 REMARK 3 S31: -0.2313 S32: 0.0875 S33: -0.0782 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 114:117) REMARK 3 ORIGIN FOR THE GROUP (A): 51.9071 14.0602 34.1918 REMARK 3 T TENSOR REMARK 3 T11: 1.1540 T22: 0.5241 REMARK 3 T33: 0.5317 T12: 0.4215 REMARK 3 T13: 0.1990 T23: 0.1450 REMARK 3 L TENSOR REMARK 3 L11: -0.2562 L22: 2.0710 REMARK 3 L33: 1.5248 L12: -0.9494 REMARK 3 L13: 0.2780 L23: -0.5916 REMARK 3 S TENSOR REMARK 3 S11: -0.2739 S12: 0.0176 S13: -0.0015 REMARK 3 S21: 0.6135 S22: 0.2650 S23: -0.0237 REMARK 3 S31: -0.4389 S32: -0.0791 S33: -0.0671 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 118:145) REMARK 3 ORIGIN FOR THE GROUP (A): 56.1299 1.6060 19.7301 REMARK 3 T TENSOR REMARK 3 T11: 0.2120 T22: 0.1686 REMARK 3 T33: 0.2049 T12: -0.0054 REMARK 3 T13: -0.0037 T23: -0.0062 REMARK 3 L TENSOR REMARK 3 L11: 0.8451 L22: 0.3981 REMARK 3 L33: 1.4331 L12: 0.6328 REMARK 3 L13: 0.2761 L23: -1.1951 REMARK 3 S TENSOR REMARK 3 S11: -0.1396 S12: 0.0075 S13: -0.1721 REMARK 3 S21: -0.0691 S22: 0.0834 S23: 0.1253 REMARK 3 S31: 0.3033 S32: -0.2639 S33: 0.0100 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 146:150) REMARK 3 ORIGIN FOR THE GROUP (A): 73.0280 -5.3881 17.2480 REMARK 3 T TENSOR REMARK 3 T11: 0.3986 T22: 0.1730 REMARK 3 T33: 0.2567 T12: 0.1077 REMARK 3 T13: 0.0724 T23: 0.0195 REMARK 3 L TENSOR REMARK 3 L11: -0.4155 L22: -0.0193 REMARK 3 L33: -0.9732 L12: -0.4641 REMARK 3 L13: -0.5298 L23: -1.1841 REMARK 3 S TENSOR REMARK 3 S11: -0.2589 S12: 0.1922 S13: -0.1096 REMARK 3 S21: -0.3913 S22: -0.2153 S23: -0.1888 REMARK 3 S31: 0.5470 S32: 0.0832 S33: 0.4148 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 151:238) REMARK 3 ORIGIN FOR THE GROUP (A): 65.0448 5.5852 31.1455 REMARK 3 T TENSOR REMARK 3 T11: 0.2132 T22: 0.1213 REMARK 3 T33: 0.1678 T12: 0.0404 REMARK 3 T13: 0.0092 T23: 0.0150 REMARK 3 L TENSOR REMARK 3 L11: 0.6914 L22: 0.6521 REMARK 3 L33: 1.7797 L12: 0.1638 REMARK 3 L13: -0.0689 L23: -0.3029 REMARK 3 S TENSOR REMARK 3 S11: -0.0049 S12: -0.0751 S13: -0.1116 REMARK 3 S21: 0.0775 S22: 0.0199 S23: -0.0632 REMARK 3 S31: 0.1122 S32: 0.0582 S33: -0.0025 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 239:259) REMARK 3 ORIGIN FOR THE GROUP (A): 67.6562 -4.8917 36.6464 REMARK 3 T TENSOR REMARK 3 T11: 0.3654 T22: 0.1604 REMARK 3 T33: 0.2175 T12: 0.0309 REMARK 3 T13: -0.0395 T23: 0.0279 REMARK 3 L TENSOR REMARK 3 L11: 0.4753 L22: 3.1193 REMARK 3 L33: 0.1504 L12: -0.0862 REMARK 3 L13: 0.0522 L23: 0.0655 REMARK 3 S TENSOR REMARK 3 S11: -0.0015 S12: -0.0646 S13: -0.1846 REMARK 3 S21: 0.6390 S22: 0.0253 S23: -0.2704 REMARK 3 S31: 0.2134 S32: 0.1244 S33: -0.0040 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN B AND RESID 6:14) REMARK 3 ORIGIN FOR THE GROUP (A): 18.4694 9.0671 32.5847 REMARK 3 T TENSOR REMARK 3 T11: 0.2854 T22: 0.5298 REMARK 3 T33: 0.4417 T12: -0.1746 REMARK 3 T13: 0.0758 T23: 0.0783 REMARK 3 L TENSOR REMARK 3 L11: -0.9286 L22: 1.1337 REMARK 3 L33: 1.1211 L12: 0.2675 REMARK 3 L13: 0.3882 L23: 0.6253 REMARK 3 S TENSOR REMARK 3 S11: -0.1466 S12: -0.1977 S13: -0.1781 REMARK 3 S21: -0.0353 S22: 0.0769 S23: 0.3167 REMARK 3 S31: 0.3604 S32: -0.8113 S33: 0.0126 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN B AND RESID 15:62) REMARK 3 ORIGIN FOR THE GROUP (A): 30.7868 17.9730 30.7095 REMARK 3 T TENSOR REMARK 3 T11: 0.1677 T22: 0.2547 REMARK 3 T33: 0.1736 T12: 0.0170 REMARK 3 T13: 0.0015 T23: 0.0135 REMARK 3 L TENSOR REMARK 3 L11: 0.5429 L22: 1.4730 REMARK 3 L33: 1.7294 L12: -0.3501 REMARK 3 L13: -0.9081 L23: -0.2601 REMARK 3 S TENSOR REMARK 3 S11: -0.0319 S12: -0.1262 S13: 0.0509 REMARK 3 S21: 0.1782 S22: 0.1224 S23: 0.0035 REMARK 3 S31: 0.0188 S32: 0.0490 S33: -0.0862 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN B AND RESID 63:77) REMARK 3 ORIGIN FOR THE GROUP (A): 21.0776 21.8492 28.4345 REMARK 3 T TENSOR REMARK 3 T11: 0.1672 T22: 0.4103 REMARK 3 T33: 0.2997 T12: 0.0547 REMARK 3 T13: 0.0502 T23: 0.0966 REMARK 3 L TENSOR REMARK 3 L11: -1.3002 L22: 2.1201 REMARK 3 L33: 3.3709 L12: -0.4126 REMARK 3 L13: -0.9617 L23: -0.5083 REMARK 3 S TENSOR REMARK 3 S11: -0.0769 S12: 0.2337 S13: 0.2986 REMARK 3 S21: 0.2120 S22: 0.4036 S23: 0.6980 REMARK 3 S31: -0.2688 S32: -0.8459 S33: -0.3097 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (CHAIN B AND RESID 78:157) REMARK 3 ORIGIN FOR THE GROUP (A): 24.4265 24.2283 20.8567 REMARK 3 T TENSOR REMARK 3 T11: 0.1870 T22: 0.3090 REMARK 3 T33: 0.2526 T12: 0.0549 REMARK 3 T13: -0.0084 T23: 0.0606 REMARK 3 L TENSOR REMARK 3 L11: 0.8282 L22: 1.6592 REMARK 3 L33: 2.6565 L12: -0.5404 REMARK 3 L13: -1.2029 L23: -0.5687 REMARK 3 S TENSOR REMARK 3 S11: 0.0971 S12: 0.2784 S13: 0.1092 REMARK 3 S21: -0.0421 S22: 0.0780 S23: 0.2161 REMARK 3 S31: -0.3010 S32: -0.4481 S33: -0.1567 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: (CHAIN B AND RESID 158:179) REMARK 3 ORIGIN FOR THE GROUP (A): 25.4081 10.2500 5.3387 REMARK 3 T TENSOR REMARK 3 T11: 0.3486 T22: 0.4423 REMARK 3 T33: 0.2035 T12: -0.0100 REMARK 3 T13: -0.1288 T23: -0.0172 REMARK 3 L TENSOR REMARK 3 L11: 1.0845 L22: 1.4823 REMARK 3 L33: 1.8794 L12: -0.8873 REMARK 3 L13: -0.0896 L23: 0.0327 REMARK 3 S TENSOR REMARK 3 S11: 0.3925 S12: 0.5517 S13: -0.2047 REMARK 3 S21: -0.5878 S22: -0.3715 S23: 0.2998 REMARK 3 S31: 0.4082 S32: -0.6884 S33: -0.0492 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: (CHAIN B AND RESID 180:192) REMARK 3 ORIGIN FOR THE GROUP (A): 23.4330 30.0839 6.4406 REMARK 3 T TENSOR REMARK 3 T11: 0.6250 T22: 0.4389 REMARK 3 T33: 0.2937 T12: 0.1832 REMARK 3 T13: -0.0759 T23: 0.1753 REMARK 3 L TENSOR REMARK 3 L11: 2.8781 L22: 2.0081 REMARK 3 L33: 1.2205 L12: -0.8421 REMARK 3 L13: 1.2076 L23: 2.8536 REMARK 3 S TENSOR REMARK 3 S11: 0.4613 S12: 0.6143 S13: -0.0575 REMARK 3 S21: -1.0825 S22: 0.1191 S23: 0.0993 REMARK 3 S31: -0.5800 S32: -0.0196 S33: -0.2440 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: (CHAIN B AND RESID 193:261) REMARK 3 ORIGIN FOR THE GROUP (A): 36.8799 11.1191 11.0039 REMARK 3 T TENSOR REMARK 3 T11: 0.2386 T22: 0.2553 REMARK 3 T33: 0.1674 T12: 0.0322 REMARK 3 T13: -0.0325 T23: 0.0025 REMARK 3 L TENSOR REMARK 3 L11: 0.3172 L22: 0.9000 REMARK 3 L33: 1.0854 L12: -0.0731 REMARK 3 L13: 0.4899 L23: -0.6010 REMARK 3 S TENSOR REMARK 3 S11: 0.0066 S12: 0.0816 S13: -0.0428 REMARK 3 S21: -0.2605 S22: 0.0908 S23: 0.0087 REMARK 3 S31: -0.0181 S32: -0.0694 S33: -0.0746 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3HO6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-JUN-09. REMARK 100 THE DEPOSITION ID IS D_1000053375. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-NOV-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8-9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9784 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 68137 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.400 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : 0.04900 REMARK 200 R SYM (I) : 0.04300 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 23.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 81.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.80 REMARK 200 R MERGE FOR SHELL (I) : 0.34400 REMARK 200 R SYM FOR SHELL (I) : 0.26800 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM TRIS, 25-30 % PEG 8000, AND 200 REMARK 280 MM GUANADINIUM CHLORIDE, PH 8-9, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 70.65600 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 21.75000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 70.65600 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 21.75000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 465 GLU A 2 REMARK 465 ASP A 3 REMARK 465 ASN A 4 REMARK 465 VAL A 29 REMARK 465 GLU A 30 REMARK 465 GLU A 31 REMARK 465 ALA A 32 REMARK 465 ILE A 260 REMARK 465 SER A 261 REMARK 465 GLU A 262 REMARK 465 ASP A 263 REMARK 465 ILE A 264 REMARK 465 LYS A 265 REMARK 465 THR A 266 REMARK 465 LEU A 267 REMARK 465 SER B 1 REMARK 465 GLU B 2 REMARK 465 ASP B 3 REMARK 465 ASN B 4 REMARK 465 GLY B 5 REMARK 465 VAL B 29 REMARK 465 GLU B 30 REMARK 465 GLU B 31 REMARK 465 ALA B 32 REMARK 465 GLY B 33 REMARK 465 SER B 34 REMARK 465 LYS B 35 REMARK 465 GLY B 114 REMARK 465 LYS B 115 REMARK 465 ASP B 116 REMARK 465 GLU B 117 REMARK 465 PHE B 118 REMARK 465 GLU B 262 REMARK 465 ASP B 263 REMARK 465 ILE B 264 REMARK 465 LYS B 265 REMARK 465 THR B 266 REMARK 465 LEU B 267 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 C ASP A 241 H SER A 242 1.03 REMARK 500 O ASP A 241 H SER A 242 1.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 415 O HOH A 415 2655 1.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 22 -61.73 -120.84 REMARK 500 ASN A 73 -117.79 58.60 REMARK 500 ASN B 22 -72.04 -127.77 REMARK 500 ASN B 73 -118.67 53.06 REMARK 500 CYS B 158 -169.67 -78.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IHP A 270 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IHP B 270 DBREF 3HO6 A 1 267 UNP P16154 TOXA_CLODI 543 809 DBREF 3HO6 B 1 267 UNP P16154 TOXA_CLODI 543 809 SEQRES 1 A 267 SER GLU ASP ASN GLY VAL ASP PHE ASN LYS ASN THR ALA SEQRES 2 A 267 LEU ASP LYS ASN TYR LEU LEU ASN ASN LYS ILE PRO SER SEQRES 3 A 267 ASN ASN VAL GLU GLU ALA GLY SER LYS ASN TYR VAL HIS SEQRES 4 A 267 TYR ILE ILE GLN LEU GLN GLY ASP ASP ILE SER TYR GLU SEQRES 5 A 267 ALA THR CYS ASN LEU PHE SER LYS ASN PRO LYS ASN SER SEQRES 6 A 267 ILE ILE ILE GLN ARG ASN MET ASN GLU SER ALA LYS SER SEQRES 7 A 267 TYR PHE LEU SER ASP ASP GLY GLU SER ILE LEU GLU LEU SEQRES 8 A 267 ASN LYS TYR ARG ILE PRO GLU ARG LEU LYS ASN LYS GLU SEQRES 9 A 267 LYS VAL LYS VAL THR PHE ILE GLY HIS GLY LYS ASP GLU SEQRES 10 A 267 PHE ASN THR SER GLU PHE ALA ARG LEU SER VAL ASP SER SEQRES 11 A 267 LEU SER ASN GLU ILE SER SER PHE LEU ASP THR ILE LYS SEQRES 12 A 267 LEU ASP ILE SER PRO LYS ASN VAL GLU VAL ASN LEU LEU SEQRES 13 A 267 GLY CYS ASN MET PHE SER TYR ASP PHE ASN VAL GLU GLU SEQRES 14 A 267 THR TYR PRO GLY LYS LEU LEU LEU SER ILE MET ASP LYS SEQRES 15 A 267 ILE THR SER THR LEU PRO ASP VAL ASN LYS ASN SER ILE SEQRES 16 A 267 THR ILE GLY ALA ASN GLN TYR GLU VAL ARG ILE ASN SER SEQRES 17 A 267 GLU GLY ARG LYS GLU LEU LEU ALA HIS SER GLY LYS TRP SEQRES 18 A 267 ILE ASN LYS GLU GLU ALA ILE MET SER ASP LEU SER SER SEQRES 19 A 267 LYS GLU TYR ILE PHE PHE ASP SER ILE ASP ASN LYS LEU SEQRES 20 A 267 LYS ALA LYS SER LYS ASN ILE PRO GLY LEU ALA SER ILE SEQRES 21 A 267 SER GLU ASP ILE LYS THR LEU SEQRES 1 B 267 SER GLU ASP ASN GLY VAL ASP PHE ASN LYS ASN THR ALA SEQRES 2 B 267 LEU ASP LYS ASN TYR LEU LEU ASN ASN LYS ILE PRO SER SEQRES 3 B 267 ASN ASN VAL GLU GLU ALA GLY SER LYS ASN TYR VAL HIS SEQRES 4 B 267 TYR ILE ILE GLN LEU GLN GLY ASP ASP ILE SER TYR GLU SEQRES 5 B 267 ALA THR CYS ASN LEU PHE SER LYS ASN PRO LYS ASN SER SEQRES 6 B 267 ILE ILE ILE GLN ARG ASN MET ASN GLU SER ALA LYS SER SEQRES 7 B 267 TYR PHE LEU SER ASP ASP GLY GLU SER ILE LEU GLU LEU SEQRES 8 B 267 ASN LYS TYR ARG ILE PRO GLU ARG LEU LYS ASN LYS GLU SEQRES 9 B 267 LYS VAL LYS VAL THR PHE ILE GLY HIS GLY LYS ASP GLU SEQRES 10 B 267 PHE ASN THR SER GLU PHE ALA ARG LEU SER VAL ASP SER SEQRES 11 B 267 LEU SER ASN GLU ILE SER SER PHE LEU ASP THR ILE LYS SEQRES 12 B 267 LEU ASP ILE SER PRO LYS ASN VAL GLU VAL ASN LEU LEU SEQRES 13 B 267 GLY CYS ASN MET PHE SER TYR ASP PHE ASN VAL GLU GLU SEQRES 14 B 267 THR TYR PRO GLY LYS LEU LEU LEU SER ILE MET ASP LYS SEQRES 15 B 267 ILE THR SER THR LEU PRO ASP VAL ASN LYS ASN SER ILE SEQRES 16 B 267 THR ILE GLY ALA ASN GLN TYR GLU VAL ARG ILE ASN SER SEQRES 17 B 267 GLU GLY ARG LYS GLU LEU LEU ALA HIS SER GLY LYS TRP SEQRES 18 B 267 ILE ASN LYS GLU GLU ALA ILE MET SER ASP LEU SER SER SEQRES 19 B 267 LYS GLU TYR ILE PHE PHE ASP SER ILE ASP ASN LYS LEU SEQRES 20 B 267 LYS ALA LYS SER LYS ASN ILE PRO GLY LEU ALA SER ILE SEQRES 21 B 267 SER GLU ASP ILE LYS THR LEU HET IHP A 270 42 HET IHP B 270 42 HETNAM IHP INOSITOL HEXAKISPHOSPHATE HETSYN IHP MYO-INOSITOL HEXAKISPHOSPHATE; INOSITOL 1,2,3,4,5,6- HETSYN 2 IHP HEXAKISPHOSPHATE FORMUL 3 IHP 2(C6 H18 O24 P6) FORMUL 5 HOH *648(H2 O) HELIX 1 1 ASP A 15 ASN A 22 1 8 HELIX 2 2 ASN A 22 ASN A 28 1 7 HELIX 3 3 ASP A 47 ASN A 61 1 15 HELIX 4 4 ASN A 71 SER A 75 5 5 HELIX 5 5 PRO A 97 LYS A 101 5 5 HELIX 6 6 SER A 127 LYS A 143 1 17 HELIX 7 7 ASN A 166 GLU A 169 5 4 HELIX 8 8 THR A 170 LEU A 187 1 18 HELIX 9 9 ASN A 191 ASN A 193 5 3 HELIX 10 10 ASN A 223 SER A 230 1 8 HELIX 11 11 ASP B 15 ASN B 22 1 8 HELIX 12 12 ASN B 22 ASN B 28 1 7 HELIX 13 13 ASP B 47 ASN B 61 1 15 HELIX 14 14 ASN B 71 SER B 75 5 5 HELIX 15 15 PRO B 97 LYS B 101 5 5 HELIX 16 16 VAL B 128 LYS B 143 1 16 HELIX 17 17 ASN B 166 GLU B 169 5 4 HELIX 18 18 THR B 170 LEU B 187 1 18 HELIX 19 19 ASN B 191 ASN B 193 5 3 HELIX 20 20 ASN B 223 SER B 230 1 8 SHEET 1 A 9 ILE A 88 ASN A 92 0 SHEET 2 A 9 LYS A 77 LEU A 81 -1 N PHE A 80 O LEU A 89 SHEET 3 A 9 SER A 65 GLN A 69 -1 N ILE A 67 O TYR A 79 SHEET 4 A 9 TYR A 37 GLN A 43 1 N ILE A 41 O ILE A 66 SHEET 5 A 9 LYS A 105 ILE A 111 1 O THR A 109 N ILE A 42 SHEET 6 A 9 ASN A 150 LEU A 156 1 O ASN A 154 N VAL A 108 SHEET 7 A 9 ILE A 195 ALA A 199 1 O THR A 196 N VAL A 153 SHEET 8 A 9 GLU A 236 ASP A 241 -1 O GLU A 236 N ALA A 199 SHEET 9 A 9 LYS A 246 SER A 251 -1 O LYS A 250 N TYR A 237 SHEET 1 B 3 VAL A 204 ILE A 206 0 SHEET 2 B 3 LYS A 212 LEU A 215 -1 O GLU A 213 N ARG A 205 SHEET 3 B 3 TRP A 221 ILE A 222 -1 O ILE A 222 N LEU A 214 SHEET 1 C 9 ILE B 88 ASN B 92 0 SHEET 2 C 9 LYS B 77 LEU B 81 -1 N PHE B 80 O LEU B 89 SHEET 3 C 9 SER B 65 GLN B 69 -1 N ILE B 67 O TYR B 79 SHEET 4 C 9 TYR B 37 GLN B 43 1 N ILE B 41 O ILE B 66 SHEET 5 C 9 LYS B 105 ILE B 111 1 O THR B 109 N ILE B 42 SHEET 6 C 9 ASN B 150 ASN B 159 1 O ASN B 154 N VAL B 108 SHEET 7 C 9 ILE B 195 ASN B 200 1 O GLY B 198 N VAL B 153 SHEET 8 C 9 GLU B 236 ASP B 241 -1 O GLU B 236 N ALA B 199 SHEET 9 C 9 LYS B 246 SER B 251 -1 O LYS B 248 N PHE B 239 SHEET 1 D 2 GLU B 122 PHE B 123 0 SHEET 2 D 2 LEU B 126 SER B 127 -1 O LEU B 126 N PHE B 123 SHEET 1 E 3 VAL B 204 ILE B 206 0 SHEET 2 E 3 LYS B 212 LEU B 215 -1 O GLU B 213 N ARG B 205 SHEET 3 E 3 TRP B 221 ILE B 222 -1 O ILE B 222 N LEU B 214 CISPEP 1 LEU B 156 GLY B 157 0 3.07 SITE 1 AC1 26 TYR A 37 LEU A 57 LYS A 60 LYS A 107 SITE 2 AC1 26 ARG A 211 LYS A 212 LYS A 224 LYS A 235 SITE 3 AC1 26 LYS A 252 HOH A 280 HOH A 291 HOH A 311 SITE 4 AC1 26 HOH A 335 HOH A 338 HOH A 376 HOH A 380 SITE 5 AC1 26 HOH A 381 HOH A 392 HOH A 440 HOH A 445 SITE 6 AC1 26 HOH A 446 HOH A 491 HOH A 520 HOH A 555 SITE 7 AC1 26 HOH A 565 HOH A 574 SITE 1 AC2 26 ASN A 9 TYR B 37 LEU B 57 LYS B 60 SITE 2 AC2 26 LYS B 107 ARG B 211 LYS B 212 LYS B 224 SITE 3 AC2 26 LYS B 235 LYS B 252 HOH B 316 HOH B 324 SITE 4 AC2 26 HOH B 329 HOH B 359 HOH B 362 HOH B 366 SITE 5 AC2 26 HOH B 391 HOH B 425 HOH B 430 HOH B 463 SITE 6 AC2 26 HOH B 470 HOH B 486 HOH B 537 HOH B 541 SITE 7 AC2 26 HOH B 588 HOH B 608 CRYST1 141.312 43.500 94.692 90.00 112.88 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007077 0.000000 0.002986 0.00000 SCALE2 0.000000 0.022989 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011462 0.00000