HEADER TRANSFERASE/DNA 03-JUN-09 3HP6 TITLE CRYSTAL STRUCTURE OF FRAGMENT DNA POLYMERASE I FROM BACILLUS TITLE 2 STEAROTHERMOPHILUS F710Y MUTANT BOUND TO G:T MISMATCH COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE I, LARGE FRAGMENT; COMPND 3 CHAIN: A, D; COMPND 4 FRAGMENT: RESIDUES 297-876; COMPND 5 EC: 2.7.7.7; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: 5'-D(*CP*GP*AP*TP*CP*AP*CP*GP*(DDG))-3'; COMPND 10 CHAIN: B, E; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: 5'-D(*AP*CP*GP*CP*CP*GP*TP*GP*AP*TP*CP*G)-3'; COMPND 14 CHAIN: C, F; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GEOBACILLUS STEAROTHERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 1422; SOURCE 4 GENE: DPO1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET30A; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 OTHER_DETAILS: SYNTHETIC OLIGONUCLEOTIDE DNA TEMPLATE STRAND; SOURCE 13 MOL_ID: 3; SOURCE 14 SYNTHETIC: YES; SOURCE 15 OTHER_DETAILS: SYNTHETIC OLIGONUCLEOTIDE DNA PRIMER STRAND KEYWDS PROTEIN-DNA COMPLEX, DNA POLYMERASE I, DNA REPLICATION, DNA-BINDING, KEYWDS 2 DNA-DIRECTED DNA POLYMERASE, HYDROLASE, NUCLEASE, KEYWDS 3 NUCLEOTIDYLTRANSFERASE, TRANSFERASE, TRANSFERASE-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR E.Y.WU,L.S.BEESE REVDAT 7 20-NOV-24 3HP6 1 REMARK REVDAT 6 06-SEP-23 3HP6 1 REMARK REVDAT 5 13-OCT-21 3HP6 1 SEQADV HETSYN REVDAT 4 29-JUL-20 3HP6 1 COMPND REMARK DBREF HET REVDAT 4 2 1 HETNAM FORMUL LINK SITE REVDAT 4 3 1 ATOM REVDAT 3 01-NOV-17 3HP6 1 REMARK REVDAT 2 29-JUN-11 3HP6 1 JRNL REVDAT 1 23-JUN-10 3HP6 0 JRNL AUTH E.Y.WU,L.S.BEESE JRNL TITL THE STRUCTURE OF A HIGH FIDELITY DNA POLYMERASE BOUND TO A JRNL TITL 2 MISMATCHED NUCLEOTIDE REVEALS AN "AJAR" INTERMEDIATE JRNL TITL 3 CONFORMATION IN THE NUCLEOTIDE SELECTION MECHANISM. JRNL REF J.BIOL.CHEM. V. 286 19758 2011 JRNL REFN ISSN 0021-9258 JRNL PMID 21454515 JRNL DOI 10.1074/JBC.M110.191130 REMARK 2 REMARK 2 RESOLUTION. 1.81 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.81 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.84 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 139376 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.300 REMARK 3 FREE R VALUE TEST SET COUNT : 6014 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.81 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.86 REMARK 3 REFLECTION IN BIN (WORKING SET) : 9598 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2850 REMARK 3 BIN FREE R VALUE SET COUNT : 505 REMARK 3 BIN FREE R VALUE : 0.3230 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 9312 REMARK 3 NUCLEIC ACID ATOMS : 848 REMARK 3 HETEROGEN ATOMS : 119 REMARK 3 SOLVENT ATOMS : 869 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.25 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.47 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.138 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.132 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.089 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.809 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.925 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 10620 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 14559 ; 1.455 ; 2.089 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1180 ; 5.517 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 462 ;33.434 ;24.134 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1768 ;14.124 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 78 ;15.754 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1634 ; 0.094 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7652 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5832 ; 0.769 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 9419 ; 1.425 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4788 ; 2.219 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 5130 ; 3.601 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2. U VALUES: REFINED INDIVIDUALLY. REMARK 4 REMARK 4 3HP6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-JUN-09. REMARK 100 THE DEPOSITION ID IS D_1000053410. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-APR-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : SI(111) CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 139378 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.810 REMARK 200 RESOLUTION RANGE LOW (A) : 42.840 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 5.000 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.81 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.1 REMARK 200 DATA REDUNDANCY IN SHELL : 5.00 REMARK 200 R MERGE FOR SHELL (I) : 0.59200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.610 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 2HVI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.65 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50% SATURATED AMMONIUM SULFATE, 0.1M REMARK 280 MES, 2.5% V/V MPD, 10MM MAGNESIUM SULFATE, PH 5.8, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 46.58500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 76.10500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 54.35500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 76.10500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 46.58500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 54.35500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL UNIT IS A COMPLEX OF ENZYME AND DNA. THERE REMARK 300 ARE TWO BIOLOGICAL UNITS IN THE ASYMMETRIC UNIT (CHAINS A,B,C AND REMARK 300 CHAINS D,E,F). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27870 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.8 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4290 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27740 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.8 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, F, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 MG MG D 200 O2B D3T D 202 1.70 REMARK 500 O HOH D 1137 O HOH D 1138 2.17 REMARK 500 NH2 ARG D 466 O HOH D 887 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DA E 26 O3' DA E 26 C3' -0.036 REMARK 500 DG E 28 O3' DDG E 29 P 0.094 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DT B 24 C4 - C5 - C7 ANGL. DEV. = 3.9 DEGREES REMARK 500 DT B 24 C6 - C5 - C7 ANGL. DEV. = -3.8 DEGREES REMARK 500 DC B 25 O4' - C1' - N1 ANGL. DEV. = 4.0 DEGREES REMARK 500 DA B 26 O4' - C1' - N9 ANGL. DEV. = 9.8 DEGREES REMARK 500 DC B 27 O4' - C4' - C3' ANGL. DEV. = -2.9 DEGREES REMARK 500 DC B 27 C4' - C3' - C2' ANGL. DEV. = -4.4 DEGREES REMARK 500 DC B 27 O4' - C1' - N1 ANGL. DEV. = 4.6 DEGREES REMARK 500 DG B 28 O4' - C4' - C3' ANGL. DEV. = -3.0 DEGREES REMARK 500 DA C 1 O4' - C1' - N9 ANGL. DEV. = 3.8 DEGREES REMARK 500 DG C 3 O4' - C1' - N9 ANGL. DEV. = 2.6 DEGREES REMARK 500 DA C 9 O5' - P - OP2 ANGL. DEV. = -6.4 DEGREES REMARK 500 DT C 10 C1' - O4' - C4' ANGL. DEV. = -7.2 DEGREES REMARK 500 DT C 10 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DC E 25 O4' - C4' - C3' ANGL. DEV. = -2.7 DEGREES REMARK 500 DC E 25 C4' - C3' - C2' ANGL. DEV. = -4.3 DEGREES REMARK 500 DC E 25 O4' - C1' - N1 ANGL. DEV. = 3.5 DEGREES REMARK 500 DA E 26 O4' - C1' - N9 ANGL. DEV. = 3.0 DEGREES REMARK 500 DC E 27 O4' - C1' - N1 ANGL. DEV. = 4.5 DEGREES REMARK 500 DG E 28 O4' - C1' - N9 ANGL. DEV. = 2.0 DEGREES REMARK 500 DA F 1 O4' - C1' - N9 ANGL. DEV. = 2.7 DEGREES REMARK 500 DC F 2 O4' - C1' - N1 ANGL. DEV. = 3.6 DEGREES REMARK 500 DC F 4 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 DC F 5 O4' - C4' - C3' ANGL. DEV. = -2.9 DEGREES REMARK 500 DT F 7 O4' - C1' - N1 ANGL. DEV. = -5.2 DEGREES REMARK 500 DA F 9 O5' - P - OP2 ANGL. DEV. = -6.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 372 64.61 62.98 REMARK 500 ASP A 402 102.72 -165.55 REMARK 500 ALA A 421 32.19 -81.21 REMARK 500 ILE A 588 -67.32 -107.43 REMARK 500 ILE A 628 -30.25 -145.39 REMARK 500 HIS A 829 -53.60 70.24 REMARK 500 ASP D 402 95.86 -160.54 REMARK 500 ALA D 421 48.12 -90.11 REMARK 500 LEU D 477 -72.80 -117.41 REMARK 500 GLU D 540 -62.27 -109.25 REMARK 500 LEU D 610 -54.99 -123.80 REMARK 500 ILE D 628 -27.28 -148.03 REMARK 500 HIS D 768 23.40 81.03 REMARK 500 HIS D 829 -51.68 74.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 200 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 D3T A 201 O2A REMARK 620 2 D3T A 201 O2B 91.6 REMARK 620 3 D3T A 201 O2G 88.4 94.3 REMARK 620 4 HOH A 249 O 89.3 101.2 164.4 REMARK 620 5 HOH A 930 O 177.4 91.0 91.0 90.6 REMARK 620 6 HOH A1064 O 86.8 175.7 81.7 82.8 90.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 200 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH D 147 O REMARK 620 2 HOH D 161 O 87.2 REMARK 620 3 D3T D 202 O2A 81.8 89.3 REMARK 620 4 D3T D 202 O1G 84.5 171.4 87.6 REMARK 620 5 HOH D 945 O 90.1 88.3 171.7 93.5 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3HPO RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF BACILLUS FRAGMENT DNA POLYMERASE I Y714S REMARK 900 MUTANT IN AJAR CONFORMATION BOUND TO G:T MISMATCH REMARK 900 RELATED ID: 3HT3 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF BACILLUS FRAGMENT DNA POLYMERASE I V713P REMARK 900 MUTANT BOUND TO G:DCTP DBREF 3HP6 A 297 876 PDB 3HP6 3HP6 297 876 DBREF 3HP6 D 297 876 PDB 3HP6 3HP6 297 876 DBREF 3HP6 B 21 29 PDB 3HP6 3HP6 21 29 DBREF 3HP6 C 1 12 PDB 3HP6 3HP6 1 12 DBREF 3HP6 E 21 29 PDB 3HP6 3HP6 21 29 DBREF 3HP6 F 1 12 PDB 3HP6 3HP6 1 12 SEQADV 3HP6 ALA A 598 PDB 3HP6 ASP 598 ENGINEERED MUTATION SEQADV 3HP6 TYR A 710 PDB 3HP6 PHE 710 ENGINEERED MUTATION SEQADV 3HP6 ALA D 598 PDB 3HP6 ASP 598 ENGINEERED MUTATION SEQADV 3HP6 TYR D 710 PDB 3HP6 PHE 710 ENGINEERED MUTATION SEQRES 1 A 580 ALA LYS MET ALA PHE THR LEU ALA ASP ARG VAL THR GLU SEQRES 2 A 580 GLU MET LEU ALA ASP LYS ALA ALA LEU VAL VAL GLU VAL SEQRES 3 A 580 VAL GLU GLU ASN TYR HIS ASP ALA PRO ILE VAL GLY ILE SEQRES 4 A 580 ALA VAL VAL ASN GLU HIS GLY ARG PHE PHE LEU ARG PRO SEQRES 5 A 580 GLU THR ALA LEU ALA ASP PRO GLN PHE VAL ALA TRP LEU SEQRES 6 A 580 GLY ASP GLU THR LYS LYS LYS SER MET PHE ASP SER LYS SEQRES 7 A 580 ARG ALA ALA VAL ALA LEU LYS TRP LYS GLY ILE GLU LEU SEQRES 8 A 580 CME GLY VAL SER PHE ASP LEU LEU LEU ALA ALA TYR LEU SEQRES 9 A 580 LEU ASP PRO ALA GLN GLY VAL ASP ASP VAL ALA ALA ALA SEQRES 10 A 580 ALA LYS MET LYS GLN TYR GLU ALA VAL ARG PRO ASP GLU SEQRES 11 A 580 ALA VAL TYR GLY LYS GLY ALA LYS ARG ALA VAL PRO ASP SEQRES 12 A 580 GLU PRO VAL LEU ALA GLU HIS LEU VAL ARG LYS ALA ALA SEQRES 13 A 580 ALA ILE TRP GLU LEU GLU ARG PRO PHE LEU ASP GLU LEU SEQRES 14 A 580 ARG ARG ASN GLU GLN ASP ARG LEU LEU VAL GLU LEU GLU SEQRES 15 A 580 GLN PRO LEU SER SER ILE LEU ALA GLU MET GLU PHE ALA SEQRES 16 A 580 GLY VAL LYS VAL ASP THR LYS ARG LEU GLU GLN MET GLY SEQRES 17 A 580 LYS GLU LEU ALA GLU GLN LEU GLY THR VAL GLU GLN ARG SEQRES 18 A 580 ILE TYR GLU LEU ALA GLY GLN GLU PHE ASN ILE ASN SER SEQRES 19 A 580 PRO LYS GLN LEU GLY VAL ILE LEU PHE GLU LYS LEU GLN SEQRES 20 A 580 LEU PRO VAL LEU LYS LYS THR LYS THR GLY TYR SER THR SEQRES 21 A 580 SER ALA ASP VAL LEU GLU LYS LEU ALA PRO TYR HIS GLU SEQRES 22 A 580 ILE VAL GLU ASN ILE LEU HIS TYR ARG GLN LEU GLY LYS SEQRES 23 A 580 LEU GLN SER THR TYR ILE GLU GLY LEU LEU LYS VAL VAL SEQRES 24 A 580 ARG PRO ALA THR LYS LYS VAL HIS THR ILE PHE ASN GLN SEQRES 25 A 580 ALA LEU THR GLN THR GLY ARG LEU SER SER THR GLU PRO SEQRES 26 A 580 ASN LEU GLN ASN ILE PRO ILE ARG LEU GLU GLU GLY ARG SEQRES 27 A 580 LYS ILE ARG GLN ALA PHE VAL PRO SER GLU SER ASP TRP SEQRES 28 A 580 LEU ILE PHE ALA ALA ASP TYR SER GLN ILE GLU LEU ARG SEQRES 29 A 580 VAL LEU ALA HIS ILE ALA GLU ASP ASP ASN LEU MET GLU SEQRES 30 A 580 ALA PHE ARG ARG ASP LEU ASP ILE HIS THR LYS THR ALA SEQRES 31 A 580 MET ASP ILE PHE GLN VAL SER GLU ASP GLU VAL THR PRO SEQRES 32 A 580 ASN MET ARG ARG GLN ALA LYS ALA VAL ASN TYR GLY ILE SEQRES 33 A 580 VAL TYR GLY ILE SER ASP TYR GLY LEU ALA GLN ASN LEU SEQRES 34 A 580 ASN ILE SER ARG LYS GLU ALA ALA GLU PHE ILE GLU ARG SEQRES 35 A 580 TYR PHE GLU SER PHE PRO GLY VAL LYS ARG TYR MET GLU SEQRES 36 A 580 ASN ILE VAL GLN GLU ALA LYS GLN LYS GLY TYR VAL THR SEQRES 37 A 580 THR LEU LEU HIS ARG ARG ARG TYR LEU PRO ASP ILE THR SEQRES 38 A 580 SER ARG ASN PHE ASN VAL ARG SER PHE ALA GLU ARG MET SEQRES 39 A 580 ALA MET ASN THR PRO ILE GLN GLY SER ALA ALA ASP ILE SEQRES 40 A 580 ILE LYS LYS ALA MET ILE ASP LEU ASN ALA ARG LEU LYS SEQRES 41 A 580 GLU GLU ARG LEU GLN ALA HIS LEU LEU LEU GLN VAL HIS SEQRES 42 A 580 ASP GLU LEU ILE LEU GLU ALA PRO LYS GLU GLU MET GLU SEQRES 43 A 580 ARG LEU CYS ARG LEU VAL PRO GLU VAL MET GLU GLN ALA SEQRES 44 A 580 VAL THR LEU ARG VAL PRO LEU LYS VAL ASP TYR HIS TYR SEQRES 45 A 580 GLY SER THR TRP TYR ASP ALA LYS SEQRES 1 D 580 ALA LYS MET ALA PHE THR LEU ALA ASP ARG VAL THR GLU SEQRES 2 D 580 GLU MET LEU ALA ASP LYS ALA ALA LEU VAL VAL GLU VAL SEQRES 3 D 580 VAL GLU GLU ASN TYR HIS ASP ALA PRO ILE VAL GLY ILE SEQRES 4 D 580 ALA VAL VAL ASN GLU HIS GLY ARG PHE PHE LEU ARG PRO SEQRES 5 D 580 GLU THR ALA LEU ALA ASP PRO GLN PHE VAL ALA TRP LEU SEQRES 6 D 580 GLY ASP GLU THR LYS LYS LYS SER MET PHE ASP SER LYS SEQRES 7 D 580 ARG ALA ALA VAL ALA LEU LYS TRP LYS GLY ILE GLU LEU SEQRES 8 D 580 CME GLY VAL SER PHE ASP LEU LEU LEU ALA ALA TYR LEU SEQRES 9 D 580 LEU ASP PRO ALA GLN GLY VAL ASP ASP VAL ALA ALA ALA SEQRES 10 D 580 ALA LYS MET LYS GLN TYR GLU ALA VAL ARG PRO ASP GLU SEQRES 11 D 580 ALA VAL TYR GLY LYS GLY ALA LYS ARG ALA VAL PRO ASP SEQRES 12 D 580 GLU PRO VAL LEU ALA GLU HIS LEU VAL ARG LYS ALA ALA SEQRES 13 D 580 ALA ILE TRP GLU LEU GLU ARG PRO PHE LEU ASP GLU LEU SEQRES 14 D 580 ARG ARG ASN GLU GLN ASP ARG LEU LEU VAL GLU LEU GLU SEQRES 15 D 580 GLN PRO LEU SER SER ILE LEU ALA GLU MET GLU PHE ALA SEQRES 16 D 580 GLY VAL LYS VAL ASP THR LYS ARG LEU GLU GLN MET GLY SEQRES 17 D 580 LYS GLU LEU ALA GLU GLN LEU GLY THR VAL GLU GLN ARG SEQRES 18 D 580 ILE TYR GLU LEU ALA GLY GLN GLU PHE ASN ILE ASN SER SEQRES 19 D 580 PRO LYS GLN LEU GLY VAL ILE LEU PHE GLU LYS LEU GLN SEQRES 20 D 580 LEU PRO VAL LEU LYS LYS THR LYS THR GLY TYR SER THR SEQRES 21 D 580 SER ALA ASP VAL LEU GLU LYS LEU ALA PRO TYR HIS GLU SEQRES 22 D 580 ILE VAL GLU ASN ILE LEU HIS TYR ARG GLN LEU GLY LYS SEQRES 23 D 580 LEU GLN SER THR TYR ILE GLU GLY LEU LEU LYS VAL VAL SEQRES 24 D 580 ARG PRO ALA THR LYS LYS VAL HIS THR ILE PHE ASN GLN SEQRES 25 D 580 ALA LEU THR GLN THR GLY ARG LEU SER SER THR GLU PRO SEQRES 26 D 580 ASN LEU GLN ASN ILE PRO ILE ARG LEU GLU GLU GLY ARG SEQRES 27 D 580 LYS ILE ARG GLN ALA PHE VAL PRO SER GLU SER ASP TRP SEQRES 28 D 580 LEU ILE PHE ALA ALA ASP TYR SER GLN ILE GLU LEU ARG SEQRES 29 D 580 VAL LEU ALA HIS ILE ALA GLU ASP ASP ASN LEU MET GLU SEQRES 30 D 580 ALA PHE ARG ARG ASP LEU ASP ILE HIS THR LYS THR ALA SEQRES 31 D 580 MET ASP ILE PHE GLN VAL SER GLU ASP GLU VAL THR PRO SEQRES 32 D 580 ASN MET ARG ARG GLN ALA LYS ALA VAL ASN TYR GLY ILE SEQRES 33 D 580 VAL TYR GLY ILE SER ASP TYR GLY LEU ALA GLN ASN LEU SEQRES 34 D 580 ASN ILE SER ARG LYS GLU ALA ALA GLU PHE ILE GLU ARG SEQRES 35 D 580 TYR PHE GLU SER PHE PRO GLY VAL LYS ARG TYR MET GLU SEQRES 36 D 580 ASN ILE VAL GLN GLU ALA LYS GLN LYS GLY TYR VAL THR SEQRES 37 D 580 THR LEU LEU HIS ARG ARG ARG TYR LEU PRO ASP ILE THR SEQRES 38 D 580 SER ARG ASN PHE ASN VAL ARG SER PHE ALA GLU ARG MET SEQRES 39 D 580 ALA MET ASN THR PRO ILE GLN GLY SER ALA ALA ASP ILE SEQRES 40 D 580 ILE LYS LYS ALA MET ILE ASP LEU ASN ALA ARG LEU LYS SEQRES 41 D 580 GLU GLU ARG LEU GLN ALA HIS LEU LEU LEU GLN VAL HIS SEQRES 42 D 580 ASP GLU LEU ILE LEU GLU ALA PRO LYS GLU GLU MET GLU SEQRES 43 D 580 ARG LEU CYS ARG LEU VAL PRO GLU VAL MET GLU GLN ALA SEQRES 44 D 580 VAL THR LEU ARG VAL PRO LEU LYS VAL ASP TYR HIS TYR SEQRES 45 D 580 GLY SER THR TRP TYR ASP ALA LYS SEQRES 1 B 9 DC DG DA DT DC DA DC DG DDG SEQRES 1 C 12 DA DC DG DC DC DG DT DG DA DT DC DG SEQRES 1 E 9 DC DG DA DT DC DA DC DG DDG SEQRES 1 F 12 DA DC DG DC DC DG DT DG DA DT DC DG MODRES 3HP6 CME A 388 CYS S,S-(2-HYDROXYETHYL)THIOCYSTEINE MODRES 3HP6 CME D 388 CYS S,S-(2-HYDROXYETHYL)THIOCYSTEINE MODRES 3HP6 DDG B 29 DG MODRES 3HP6 DDG E 29 DG HET CME A 388 10 HET CME D 388 10 HET DDG B 29 21 HET DDG E 29 21 HET GLC G 1 11 HET FRU G 2 12 HET GLC H 1 11 HET FRU H 2 12 HET SO4 A 2 5 HET MG A 200 1 HET D3T A 201 28 HET SO4 D 1 5 HET MG D 200 1 HET D3T D 202 28 HET SO4 D 878 5 HETNAM CME S,S-(2-HYDROXYETHYL)THIOCYSTEINE HETNAM DDG 2',3'-DIDEOXY-GUANOSINE-5'-MONOPHOSPHATE HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETNAM FRU BETA-D-FRUCTOFURANOSE HETNAM SO4 SULFATE ION HETNAM MG MAGNESIUM ION HETNAM D3T 2',3'-DIDEOXY-THYMIDINE-5'-TRIPHOSPHATE HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN FRU BETA-D-FRUCTOSE; D-FRUCTOSE; FRUCTOSE FORMUL 1 CME 2(C5 H11 N O3 S2) FORMUL 3 DDG 2(C10 H14 N5 O6 P) FORMUL 7 GLC 2(C6 H12 O6) FORMUL 7 FRU 2(C6 H12 O6) FORMUL 9 SO4 3(O4 S 2-) FORMUL 10 MG 2(MG 2+) FORMUL 11 D3T 2(C10 H17 N2 O13 P3) FORMUL 16 HOH *869(H2 O) HELIX 1 1 THR A 308 ALA A 313 5 6 HELIX 2 2 ARG A 347 LEU A 352 1 6 HELIX 3 3 ASP A 354 ASP A 363 1 10 HELIX 4 4 ASP A 372 LYS A 383 1 12 HELIX 5 5 LEU A 394 ASP A 402 1 9 HELIX 6 6 PRO A 403 GLY A 406 5 4 HELIX 7 7 ASP A 409 MET A 416 1 8 HELIX 8 8 PRO A 424 GLY A 430 1 7 HELIX 9 9 LYS A 431 ARG A 435 5 5 HELIX 10 10 ASP A 439 ASN A 468 1 30 HELIX 11 11 GLN A 470 GLU A 476 1 7 HELIX 12 12 LEU A 477 GLY A 492 1 16 HELIX 13 13 ASP A 496 GLY A 523 1 28 HELIX 14 14 SER A 530 GLU A 540 1 11 HELIX 15 15 SER A 557 LEU A 564 1 8 HELIX 16 16 GLU A 569 THR A 586 1 18 HELIX 17 17 ILE A 588 VAL A 595 1 8 HELIX 18 18 LEU A 630 LYS A 635 1 6 HELIX 19 19 ILE A 636 GLN A 638 5 3 HELIX 20 20 GLN A 656 GLU A 667 1 12 HELIX 21 21 ASP A 668 ARG A 677 1 10 HELIX 22 22 ASP A 680 PHE A 690 1 11 HELIX 23 23 SER A 693 VAL A 697 5 5 HELIX 24 24 THR A 698 TYR A 710 1 13 HELIX 25 25 GLY A 711 GLY A 715 5 5 HELIX 26 26 SER A 717 ASN A 726 1 10 HELIX 27 27 SER A 728 PHE A 743 1 16 HELIX 28 28 PHE A 743 GLY A 761 1 19 HELIX 29 29 PRO A 774 SER A 778 5 5 HELIX 30 30 ASN A 780 GLU A 818 1 39 HELIX 31 31 GLU A 840 GLN A 854 1 15 HELIX 32 32 THR D 308 ALA D 313 5 6 HELIX 33 33 ARG D 347 LEU D 352 1 6 HELIX 34 34 ASP D 354 ASP D 363 1 10 HELIX 35 35 ASP D 372 TRP D 382 1 11 HELIX 36 36 LEU D 394 ASP D 402 1 9 HELIX 37 37 PRO D 403 GLY D 406 5 4 HELIX 38 38 ASP D 409 MET D 416 1 8 HELIX 39 39 PRO D 424 GLY D 430 1 7 HELIX 40 40 LYS D 431 ARG D 435 5 5 HELIX 41 41 ASP D 439 ASN D 468 1 30 HELIX 42 42 GLN D 470 GLU D 476 1 7 HELIX 43 43 LEU D 477 GLY D 492 1 16 HELIX 44 44 ASP D 496 GLY D 523 1 28 HELIX 45 45 SER D 530 GLU D 540 1 11 HELIX 46 46 SER D 557 LEU D 564 1 8 HELIX 47 47 GLU D 569 THR D 586 1 18 HELIX 48 48 ILE D 588 VAL D 595 1 8 HELIX 49 49 LEU D 630 LYS D 635 1 6 HELIX 50 50 ILE D 636 GLN D 638 5 3 HELIX 51 51 GLN D 656 GLU D 667 1 12 HELIX 52 52 ASP D 668 ARG D 677 1 10 HELIX 53 53 ASP D 680 GLN D 691 1 12 HELIX 54 54 SER D 693 VAL D 697 5 5 HELIX 55 55 THR D 698 TYR D 710 1 13 HELIX 56 56 SER D 717 ASN D 726 1 10 HELIX 57 57 SER D 728 PHE D 743 1 16 HELIX 58 58 PHE D 743 GLY D 761 1 19 HELIX 59 59 PRO D 774 SER D 778 5 5 HELIX 60 60 ASN D 780 GLU D 818 1 39 HELIX 61 61 GLU D 840 GLN D 854 1 15 SHEET 1 A 6 THR A 302 LEU A 303 0 SHEET 2 A 6 GLY A 342 LEU A 346 1 O ARG A 343 N THR A 302 SHEET 3 A 6 GLY A 334 ASN A 339 -1 N VAL A 337 O PHE A 344 SHEET 4 A 6 LYS A 315 GLU A 321 -1 N ALA A 317 O VAL A 338 SHEET 5 A 6 LYS A 367 MET A 370 1 O SER A 369 N LEU A 318 SHEET 6 A 6 VAL A 390 ASP A 393 1 O PHE A 392 N MET A 370 SHEET 1 B 3 LYS A 601 VAL A 602 0 SHEET 2 B 3 VAL A 493 VAL A 495 -1 N VAL A 493 O VAL A 602 SHEET 3 B 3 PHE A 640 VAL A 641 -1 O VAL A 641 N LYS A 494 SHEET 1 C 2 LYS A 549 THR A 550 0 SHEET 2 C 2 GLY A 553 TYR A 554 -1 O GLY A 553 N THR A 550 SHEET 1 D 2 ILE A 605 ASN A 607 0 SHEET 2 D 2 SER A 617 THR A 619 -1 O SER A 617 N ASN A 607 SHEET 1 E 4 HIS A 823 GLN A 827 0 SHEET 2 E 4 GLU A 831 PRO A 837 -1 O ILE A 833 N LEU A 825 SHEET 3 E 4 TRP A 647 TYR A 654 -1 N PHE A 650 O LEU A 834 SHEET 4 E 4 VAL A 864 GLY A 869 -1 O HIS A 867 N ALA A 651 SHEET 1 F 2 TYR A 762 THR A 764 0 SHEET 2 F 2 ARG A 770 TYR A 772 -1 O ARG A 771 N VAL A 763 SHEET 1 G 6 THR D 302 LEU D 303 0 SHEET 2 G 6 GLY D 342 LEU D 346 1 O PHE D 345 N THR D 302 SHEET 3 G 6 GLY D 334 ASN D 339 -1 N VAL D 337 O PHE D 344 SHEET 4 G 6 LYS D 315 GLU D 321 -1 N ALA D 317 O VAL D 338 SHEET 5 G 6 LYS D 367 MET D 370 1 O SER D 369 N LEU D 318 SHEET 6 G 6 VAL D 390 ASP D 393 1 O PHE D 392 N MET D 370 SHEET 1 H 3 LYS D 601 VAL D 602 0 SHEET 2 H 3 VAL D 493 VAL D 495 -1 N VAL D 493 O VAL D 602 SHEET 3 H 3 PHE D 640 VAL D 641 -1 O VAL D 641 N LYS D 494 SHEET 1 I 2 LYS D 549 THR D 550 0 SHEET 2 I 2 GLY D 553 TYR D 554 -1 O GLY D 553 N THR D 550 SHEET 1 J 2 ILE D 605 ASN D 607 0 SHEET 2 J 2 SER D 617 THR D 619 -1 O THR D 619 N ILE D 605 SHEET 1 K 4 HIS D 823 GLN D 827 0 SHEET 2 K 4 GLU D 831 PRO D 837 -1 O ILE D 833 N LEU D 825 SHEET 3 K 4 TRP D 647 TYR D 654 -1 N PHE D 650 O LEU D 834 SHEET 4 K 4 VAL D 864 GLY D 869 -1 O ASP D 865 N ASP D 653 SHEET 1 L 2 TYR D 762 THR D 764 0 SHEET 2 L 2 ARG D 770 TYR D 772 -1 O ARG D 771 N VAL D 763 LINK C LEU A 387 N CME A 388 1555 1555 1.32 LINK C CME A 388 N GLY A 389 1555 1555 1.33 LINK C LEU D 387 N CME D 388 1555 1555 1.34 LINK C CME D 388 N GLY D 389 1555 1555 1.33 LINK O3' DG B 28 P DDG B 29 1555 1555 1.63 LINK O3' DG E 28 P DDG E 29 1555 1555 1.70 LINK C1 GLC G 1 O2 FRU G 2 1555 1555 1.42 LINK C1 GLC H 1 O2 FRU H 2 1555 1555 1.43 LINK MG MG A 200 O2A D3T A 201 1555 1555 2.12 LINK MG MG A 200 O2B D3T A 201 1555 1555 1.88 LINK MG MG A 200 O2G D3T A 201 1555 1555 2.04 LINK MG MG A 200 O HOH A 249 1555 1555 2.46 LINK MG MG A 200 O HOH A 930 1555 1555 2.09 LINK MG MG A 200 O HOH A1064 1555 1555 2.27 LINK O HOH D 147 MG MG D 200 1555 1555 2.02 LINK O HOH D 161 MG MG D 200 1555 1555 2.18 LINK MG MG D 200 O2A D3T D 202 1555 1555 2.03 LINK MG MG D 200 O1G D3T D 202 1555 1555 2.08 LINK MG MG D 200 O HOH D 945 1555 1555 2.07 CISPEP 1 GLU A 620 PRO A 621 0 1.48 CISPEP 2 GLU D 620 PRO D 621 0 -0.34 CRYST1 93.170 108.710 152.210 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010733 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009199 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006570 0.00000 CONECT 709 715 CONECT 715 709 716 CONECT 716 715 717 723 CONECT 717 716 718 CONECT 718 717 719 CONECT 719 718 720 CONECT 720 719 721 CONECT 721 720 722 CONECT 722 721 CONECT 723 716 724 725 CONECT 724 723 CONECT 725 723 CONECT 5386 5392 CONECT 5392 5386 5393 CONECT 5393 5392 5394 5400 CONECT 5394 5393 5395 CONECT 5395 5394 5396 CONECT 5396 5395 5397 CONECT 5397 5396 5398 CONECT 5398 5397 5399 CONECT 5399 5398 CONECT 5400 5393 5401 5402 CONECT 5401 5400 CONECT 5402 5400 CONECT 9523 9537 CONECT 9537 9523 9538 9539 9540 CONECT 9538 9537 CONECT 9539 9537 CONECT 9540 9537 9541 CONECT 9541 9540 9542 CONECT 9542 9541 9543 9544 CONECT 9543 9542 9546 CONECT 9544 9542 9545 CONECT 9545 9544 9546 CONECT 9546 9543 9545 9547 CONECT 9547 9546 9548 9557 CONECT 9548 9547 9549 CONECT 9549 9548 9550 CONECT 9550 9549 9551 9557 CONECT 9551 9550 9552 9553 CONECT 9552 9551 CONECT 9553 9551 9554 CONECT 9554 9553 9555 9556 CONECT 9555 9554 CONECT 9556 9554 9557 CONECT 9557 9547 9550 9556 CONECT 9949 9963 CONECT 9963 9949 9964 9965 9966 CONECT 9964 9963 CONECT 9965 9963 CONECT 9966 9963 9967 CONECT 9967 9966 9968 CONECT 9968 9967 9969 9970 CONECT 9969 9968 9972 CONECT 9970 9968 9971 CONECT 9971 9970 9972 CONECT 9972 9969 9971 9973 CONECT 9973 9972 9974 9983 CONECT 9974 9973 9975 CONECT 9975 9974 9976 CONECT 9976 9975 9977 9983 CONECT 9977 9976 9978 9979 CONECT 9978 9977 CONECT 9979 9977 9980 CONECT 9980 9979 9981 9982 CONECT 9981 9980 CONECT 9982 9980 9983 CONECT 9983 9973 9976 9982 CONECT10229102301023810247 CONECT10230102291023110235 CONECT10231102301023210236 CONECT10232102311023310237 CONECT10233102321023410238 CONECT102341023310239 CONECT1023510230 CONECT1023610231 CONECT1023710232 CONECT102381022910233 CONECT1023910234 CONECT102401024110246 CONECT1024110240102421024710250 CONECT10242102411024310248 CONECT10243102421024410249 CONECT10244102431024510250 CONECT102451024410251 CONECT1024610240 CONECT102471022910241 CONECT1024810242 CONECT1024910243 CONECT102501024110244 CONECT1025110245 CONECT10252102531026110270 CONECT10253102521025410258 CONECT10254102531025510259 CONECT10255102541025610260 CONECT10256102551025710261 CONECT102571025610262 CONECT1025810253 CONECT1025910254 CONECT1026010255 CONECT102611025210256 CONECT1026210257 CONECT102631026410269 CONECT1026410263102651027010273 CONECT10265102641026610271 CONECT10266102651026710272 CONECT10267102661026810273 CONECT102681026710274 CONECT1026910263 CONECT102701025210264 CONECT1027110265 CONECT1027210266 CONECT102731026410267 CONECT1027410268 CONECT1027510276102771027810279 CONECT1027610275 CONECT1027710275 CONECT1027810275 CONECT1027910275 CONECT1028010283103031030710404 CONECT102801047010602 CONECT1028110282102831028410300 CONECT1028210281 CONECT102831028010281 CONECT102841028110285 CONECT102851028410286 CONECT10286102851028710299 CONECT102871028610288 CONECT10288102871028910298 CONECT10289102881029010291 CONECT102901028910296 CONECT10291102891029210293 CONECT1029210291 CONECT102931029110294 CONECT10294102931029510296 CONECT1029510294 CONECT10296102901029410297 CONECT1029710296 CONECT102981028810299 CONECT102991028610298 CONECT103001028110301 CONECT1030110300103021030310304 CONECT1030210301 CONECT103031028010301 CONECT103041030110305 CONECT1030510304103061030710308 CONECT1030610305 CONECT103071028010305 CONECT1030810305 CONECT1030910310103111031210313 CONECT1031010309 CONECT1031110309 CONECT1031210309 CONECT1031310309 CONECT1031410317103401069710704 CONECT1031410839 CONECT1031510316103171031810334 CONECT1031610315 CONECT103171031410315 CONECT103181031510319 CONECT103191031810320 CONECT10320103191032110333 CONECT103211032010322 CONECT10322103211032310332 CONECT10323103221032410325 CONECT103241032310330 CONECT10325103231032610327 CONECT1032610325 CONECT103271032510328 CONECT10328103271032910330 CONECT1032910328 CONECT10330103241032810331 CONECT1033110330 CONECT103321032210333 CONECT103331032010332 CONECT103341031510335 CONECT1033510334103361033710338 CONECT1033610335 CONECT1033710335 CONECT103381033510339 CONECT1033910338103401034110342 CONECT103401031410339 CONECT1034110339 CONECT1034210339 CONECT1034310344103451034610347 CONECT1034410343 CONECT1034510343 CONECT1034610343 CONECT1034710343 CONECT1040410280 CONECT1047010280 CONECT1060210280 CONECT1069710314 CONECT1070410314 CONECT1083910314 MASTER 394 0 15 61 38 0 0 611148 6 195 94 END