data_3HQF # _entry.id 3HQF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.378 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3HQF pdb_00003hqf 10.2210/pdb3hqf/pdb NDB NA0039 ? ? RCSB RCSB053455 ? ? WWPDB D_1000053455 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1na6 R.EcoRII-R88A unspecified PDB 3HQG . unspecified # _pdbx_database_status.entry_id 3HQF _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-06-06 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Golovenko, D.' 1 'Manakova, E.' 2 'Grazulis, S.' 3 'Tamulaitiene, G.' 4 'Siksnys, V.' 5 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;Structural mechanisms for the 5'-CCWGG sequence recognition by the N- and C-terminal domains of EcoRII. ; 'Nucleic Acids Res.' 37 6613 6624 2009 NARHAD UK 0305-1048 0389 ? 19729506 10.1093/nar/gkp699 1 'Crystal structure of type IIE restriction endonuclease EcoRII reveals an autoinhibition mechanism by a novel effector-binding fold' J.Mol.Biol. 335 307 319 2004 JMOBAK UK 0022-2836 0070 ? 14659759 10.1016/j.jmb.2003.10.030 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Golovenko, D.' 1 ? primary 'Manakova, E.' 2 ? primary 'Tamulaitiene, G.' 3 ? primary 'Grazulis, S.' 4 ? primary 'Siksnys, V.' 5 ? 1 'Zhou, X.E.' 6 ? 1 'Wang, Y.' 7 ? 1 'Reuter, M.' 8 ? 1 'Mucke, M.' 9 ? 1 'Kruger, D.H.' 10 ? 1 'Meehan, E.J.' 11 ? 1 'Chen, L.' 12 ? # _cell.entry_id 3HQF _cell.length_a 43.156 _cell.length_b 43.156 _cell.length_c 253.648 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3HQF _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Restriction endonuclease' 19909.236 1 3.1.21.4 ? 'N-terminal effector-binding domain (UNP residues 2-170)' ? 2 polymer syn "5'-D(*GP*CP*CP*CP*TP*GP*GP*CP*G)-3'" 2732.786 1 ? ? ? ? 3 polymer syn "5'-D(*CP*GP*CP*CP*AP*GP*GP*GP*C)-3'" 2741.800 1 ? ? ? ? 4 water nat water 18.015 153 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Restriction endonuclease type IIe' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MRGSHHHHHHGSSVFHNWLLEIACENYFVYIKRLSANDTGATGGHQVGLYIPSGIVEKLFPSINHTRELNPSVFLTAHVS SHDCPDSEARAIYYNSRHFGKTRNEKRITRWGRGSPLQDPENTGALTLLAFKLDEQGGDCKEVNIWVCASTDEEDVIETA IGEVIPGALISGPAGQILGGL ; ;MRGSHHHHHHGSSVFHNWLLEIACENYFVYIKRLSANDTGATGGHQVGLYIPSGIVEKLFPSINHTRELNPSVFLTAHVS SHDCPDSEARAIYYNSRHFGKTRNEKRITRWGRGSPLQDPENTGALTLLAFKLDEQGGDCKEVNIWVCASTDEEDVIETA IGEVIPGALISGPAGQILGGL ; A ? 2 polydeoxyribonucleotide no no '(DG)(DC)(DC)(DC)(DT)(DG)(DG)(DC)(DG)' GCCCTGGCG B ? 3 polydeoxyribonucleotide no no '(DC)(DG)(DC)(DC)(DA)(DG)(DG)(DG)(DC)' CGCCAGGGC C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ARG n 1 3 GLY n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 GLY n 1 12 SER n 1 13 SER n 1 14 VAL n 1 15 PHE n 1 16 HIS n 1 17 ASN n 1 18 TRP n 1 19 LEU n 1 20 LEU n 1 21 GLU n 1 22 ILE n 1 23 ALA n 1 24 CYS n 1 25 GLU n 1 26 ASN n 1 27 TYR n 1 28 PHE n 1 29 VAL n 1 30 TYR n 1 31 ILE n 1 32 LYS n 1 33 ARG n 1 34 LEU n 1 35 SER n 1 36 ALA n 1 37 ASN n 1 38 ASP n 1 39 THR n 1 40 GLY n 1 41 ALA n 1 42 THR n 1 43 GLY n 1 44 GLY n 1 45 HIS n 1 46 GLN n 1 47 VAL n 1 48 GLY n 1 49 LEU n 1 50 TYR n 1 51 ILE n 1 52 PRO n 1 53 SER n 1 54 GLY n 1 55 ILE n 1 56 VAL n 1 57 GLU n 1 58 LYS n 1 59 LEU n 1 60 PHE n 1 61 PRO n 1 62 SER n 1 63 ILE n 1 64 ASN n 1 65 HIS n 1 66 THR n 1 67 ARG n 1 68 GLU n 1 69 LEU n 1 70 ASN n 1 71 PRO n 1 72 SER n 1 73 VAL n 1 74 PHE n 1 75 LEU n 1 76 THR n 1 77 ALA n 1 78 HIS n 1 79 VAL n 1 80 SER n 1 81 SER n 1 82 HIS n 1 83 ASP n 1 84 CYS n 1 85 PRO n 1 86 ASP n 1 87 SER n 1 88 GLU n 1 89 ALA n 1 90 ARG n 1 91 ALA n 1 92 ILE n 1 93 TYR n 1 94 TYR n 1 95 ASN n 1 96 SER n 1 97 ARG n 1 98 HIS n 1 99 PHE n 1 100 GLY n 1 101 LYS n 1 102 THR n 1 103 ARG n 1 104 ASN n 1 105 GLU n 1 106 LYS n 1 107 ARG n 1 108 ILE n 1 109 THR n 1 110 ARG n 1 111 TRP n 1 112 GLY n 1 113 ARG n 1 114 GLY n 1 115 SER n 1 116 PRO n 1 117 LEU n 1 118 GLN n 1 119 ASP n 1 120 PRO n 1 121 GLU n 1 122 ASN n 1 123 THR n 1 124 GLY n 1 125 ALA n 1 126 LEU n 1 127 THR n 1 128 LEU n 1 129 LEU n 1 130 ALA n 1 131 PHE n 1 132 LYS n 1 133 LEU n 1 134 ASP n 1 135 GLU n 1 136 GLN n 1 137 GLY n 1 138 GLY n 1 139 ASP n 1 140 CYS n 1 141 LYS n 1 142 GLU n 1 143 VAL n 1 144 ASN n 1 145 ILE n 1 146 TRP n 1 147 VAL n 1 148 CYS n 1 149 ALA n 1 150 SER n 1 151 THR n 1 152 ASP n 1 153 GLU n 1 154 GLU n 1 155 ASP n 1 156 VAL n 1 157 ILE n 1 158 GLU n 1 159 THR n 1 160 ALA n 1 161 ILE n 1 162 GLY n 1 163 GLU n 1 164 VAL n 1 165 ILE n 1 166 PRO n 1 167 GLY n 1 168 ALA n 1 169 LEU n 1 170 ILE n 1 171 SER n 1 172 GLY n 1 173 PRO n 1 174 ALA n 1 175 GLY n 1 176 GLN n 1 177 ILE n 1 178 LEU n 1 179 GLY n 1 180 GLY n 1 181 LEU n 2 1 DG n 2 2 DC n 2 3 DC n 2 4 DC n 2 5 DT n 2 6 DG n 2 7 DG n 2 8 DC n 2 9 DG n 3 1 DC n 3 2 DG n 3 3 DC n 3 4 DC n 3 5 DA n 3 6 DG n 3 7 DG n 3 8 DG n 3 9 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene EcoRII _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain JM109 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PQE30 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP O69414_ECOLX O69414 1 ;SVFHNWLLEIACENYFVYIKRLSANDTGATGGHQVGLYIPSGIVEKLFPSINHTRELNPSVFLTAHVSSHDCPDSEARAI YYNSRHFGKTRNEKRITRWGRGSPLQDPENTGALTLLAFKLDEQGGDCKEVNIWVCASTDEEDVIETAIGEVIPGALISG PAGQILGGL ; 2 ? 2 PDB 3HQF 3HQF 2 GCCCTGGCG -4 ? 3 PDB 3HQF 3HQF 3 CGCCAGGGC -4 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3HQF A 13 ? 181 ? O69414 2 ? 170 ? 4 172 2 2 3HQF B 1 ? 9 ? 3HQF -4 ? 4 ? -4 4 3 3 3HQF C 1 ? 9 ? 3HQF -4 ? 4 ? -4 4 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3HQF MET A 1 ? UNP O69414 ? ? 'expression tag' -8 1 1 3HQF ARG A 2 ? UNP O69414 ? ? 'expression tag' -7 2 1 3HQF GLY A 3 ? UNP O69414 ? ? 'expression tag' -6 3 1 3HQF SER A 4 ? UNP O69414 ? ? 'expression tag' -5 4 1 3HQF HIS A 5 ? UNP O69414 ? ? 'expression tag' -4 5 1 3HQF HIS A 6 ? UNP O69414 ? ? 'expression tag' -3 6 1 3HQF HIS A 7 ? UNP O69414 ? ? 'expression tag' -2 7 1 3HQF HIS A 8 ? UNP O69414 ? ? 'expression tag' -1 8 1 3HQF HIS A 9 ? UNP O69414 ? ? 'expression tag' 0 9 1 3HQF HIS A 10 ? UNP O69414 ? ? 'expression tag' 1 10 1 3HQF GLY A 11 ? UNP O69414 ? ? 'expression tag' 2 11 1 3HQF SER A 12 ? UNP O69414 ? ? 'expression tag' 3 12 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3HQF _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.33 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 47.13 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 4.5 _exptl_crystal_grow.temp 291 _exptl_crystal_grow.pdbx_details '1M sodium acetate, 0.2M lithium acetate, 10% glycerol, pH 4.5, VAPOR DIFFUSION, SITTING DROP, temperature 291K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.pdbx_collection_date 2006-11-11 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Si (111), horizontally focussing' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.8080 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'EMBL/DESY, HAMBURG BEAMLINE X13' _diffrn_source.pdbx_wavelength_list 0.8080 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site 'EMBL/DESY, HAMBURG' _diffrn_source.pdbx_synchrotron_beamline X13 # _reflns.entry_id 3HQF _reflns.d_resolution_high 2.504 _reflns.d_resolution_low 63.500 _reflns.number_all ? _reflns.number_obs 9055 _reflns.pdbx_Rmerge_I_obs 0.068 _reflns.pdbx_netI_over_sigmaI 6.856 _reflns.pdbx_Rsym_value 0.068 _reflns.pdbx_redundancy 6.900 _reflns.percent_possible_obs 99.100 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.B_iso_Wilson_estimate 38 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.50 _reflns_shell.d_res_low 2.64 _reflns_shell.number_measured_obs ? _reflns_shell.number_measured_all 7469 _reflns_shell.number_unique_obs ? _reflns_shell.Rmerge_I_obs 0.079 _reflns_shell.meanI_over_sigI_obs 7.0 _reflns_shell.pdbx_Rsym_value 0.079 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_redundancy 6.20 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1199 _reflns_shell.percent_possible_all 94.30 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3HQF _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_d_res_high 2.510 _refine.ls_d_res_low 17.500 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.150 _refine.ls_number_reflns_obs 8946 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.ls_matrix_type ? _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : RESIDUAL ONLY' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.191 _refine.ls_R_factor_R_work 0.187 _refine.ls_wR_factor_R_work 0.213 _refine.ls_R_factor_R_free 0.229 _refine.ls_wR_factor_R_free 0.273 _refine.ls_percent_reflns_R_free 9.600 _refine.ls_number_reflns_R_free 856 _refine.ls_number_reflns_R_work 8090 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 14.983 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.060 _refine.aniso_B[2][2] 0.060 _refine.aniso_B[3][3] -0.120 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.934 _refine.correlation_coeff_Fo_to_Fc_free 0.915 _refine.overall_SU_R_Cruickshank_DPI 0.794 _refine.overall_SU_R_free 0.285 _refine.pdbx_overall_ESU_R 0.794 _refine.pdbx_overall_ESU_R_Free 0.285 _refine.overall_SU_ML 0.173 _refine.overall_SU_B 16.833 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.859 _refine.B_iso_max 69.12 _refine.B_iso_min 2.00 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.00 _refine.occupancy_min 1.00 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model 'PDB ENTRY 1NA6' _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1334 _refine_hist.pdbx_number_atoms_nucleic_acid 363 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 153 _refine_hist.number_atoms_total 1850 _refine_hist.d_res_high 2.510 _refine_hist.d_res_low 17.500 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' r_bond_refined_d 1772 0.016 0.021 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2480 1.916 2.207 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 172 6.784 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 64 35.421 24.062 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 214 16.572 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 8 18.781 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 273 0.109 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 1252 0.008 0.021 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 855 0.796 1.500 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 1374 1.584 2.000 ? ? 'X-RAY DIFFRACTION' r_scbond_it 917 1.765 3.000 ? ? 'X-RAY DIFFRACTION' r_scangle_it 1106 2.665 4.500 ? ? # _refine_ls_shell.d_res_high 2.505 _refine_ls_shell.d_res_low 2.569 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 89.300 _refine_ls_shell.number_reflns_R_work 525 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.261 _refine_ls_shell.R_factor_R_free 0.341 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 51 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 576 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.redundancy_reflns_obs ? # _struct.entry_id 3HQF _struct.title 'Crystal structure of restriction endonuclease EcoRII N-terminal effector-binding domain in complex with cognate DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3HQF _struct_keywords.text ;restriction endonuclease, EcoRII, DNA-binding pseudobarrel fold, protein-DNA complex, DNA recognition, Endonuclease, HYDROLASE-DNA COMPLEX ; _struct_keywords.pdbx_keywords HYDROLASE/DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 12 ? CYS A 24 ? SER A 3 CYS A 15 1 ? 13 HELX_P HELX_P2 2 SER A 35 ? GLY A 40 ? SER A 26 GLY A 31 1 ? 6 HELX_P HELX_P3 3 PRO A 52 ? PHE A 60 ? PRO A 43 PHE A 51 1 ? 9 HELX_P HELX_P4 4 PRO A 61 ? ASN A 64 ? PRO A 52 ASN A 55 5 ? 4 HELX_P HELX_P5 5 SER A 115 ? THR A 123 ? SER A 106 THR A 114 5 ? 9 HELX_P HELX_P6 6 SER A 150 ? GLY A 162 ? SER A 141 GLY A 153 1 ? 13 HELX_P HELX_P7 7 ALA A 174 ? LEU A 178 ? ALA A 165 LEU A 169 1 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? B DG 1 N1 ? ? ? 1_555 C DC 9 N3 ? ? B DG -4 C DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DG 1 N2 ? ? ? 1_555 C DC 9 O2 ? ? B DG -4 C DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 1 O6 ? ? ? 1_555 C DC 9 N4 ? ? B DG -4 C DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DC 2 N3 ? ? ? 1_555 C DG 8 N1 ? ? B DC -3 C DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DC 2 N4 ? ? ? 1_555 C DG 8 O6 ? ? B DC -3 C DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DC 2 O2 ? ? ? 1_555 C DG 8 N2 ? ? B DC -3 C DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DC 3 N3 ? ? ? 1_555 C DG 7 N1 ? ? B DC -2 C DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DC 3 N4 ? ? ? 1_555 C DG 7 O6 ? ? B DC -2 C DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DC 3 O2 ? ? ? 1_555 C DG 7 N2 ? ? B DC -2 C DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DC 4 N3 ? ? ? 1_555 C DG 6 N1 ? ? B DC -1 C DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DC 4 N4 ? ? ? 1_555 C DG 6 O6 ? ? B DC -1 C DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DC 4 O2 ? ? ? 1_555 C DG 6 N2 ? ? B DC -1 C DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DT 5 N3 ? ? ? 1_555 C DA 5 N1 ? ? B DT 0 C DA 0 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DT 5 O4 ? ? ? 1_555 C DA 5 N6 ? ? B DT 0 C DA 0 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DG 6 N1 ? ? ? 1_555 C DC 4 N3 ? ? B DG 1 C DC -1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DG 6 N2 ? ? ? 1_555 C DC 4 O2 ? ? B DG 1 C DC -1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DG 6 O6 ? ? ? 1_555 C DC 4 N4 ? ? B DG 1 C DC -1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DG 7 N1 ? ? ? 1_555 C DC 3 N3 ? ? B DG 2 C DC -2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DG 7 N2 ? ? ? 1_555 C DC 3 O2 ? ? B DG 2 C DC -2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DG 7 O6 ? ? ? 1_555 C DC 3 N4 ? ? B DG 2 C DC -2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DC 8 N3 ? ? ? 1_555 C DG 2 N1 ? ? B DC 3 C DG -3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DC 8 N4 ? ? ? 1_555 C DG 2 O6 ? ? B DC 3 C DG -3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DC 8 O2 ? ? ? 1_555 C DG 2 N2 ? ? B DC 3 C DG -3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DG 9 N1 ? ? ? 1_555 C DC 1 N3 ? ? B DG 4 C DC -4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DG 9 N2 ? ? ? 1_555 C DC 1 O2 ? ? B DG 4 C DC -4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DG 9 O6 ? ? ? 1_555 C DC 1 N4 ? ? B DG 4 C DC -4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 8 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 48 ? ILE A 51 ? GLY A 39 ILE A 42 A 2 GLU A 105 ? THR A 109 ? GLU A 96 THR A 100 A 3 SER A 87 ? TYR A 94 ? SER A 78 TYR A 85 A 4 SER A 72 ? VAL A 79 ? SER A 63 VAL A 70 A 5 GLU A 142 ? VAL A 147 ? GLU A 133 VAL A 138 A 6 LEU A 126 ? LYS A 132 ? LEU A 117 LYS A 123 A 7 TYR A 27 ? ARG A 33 ? TYR A 18 ARG A 24 A 8 ILE A 170 ? PRO A 173 ? ILE A 161 PRO A 164 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 49 ? N LEU A 40 O ILE A 108 ? O ILE A 99 A 2 3 O ARG A 107 ? O ARG A 98 N ILE A 92 ? N ILE A 83 A 3 4 O SER A 87 ? O SER A 78 N ALA A 77 ? N ALA A 68 A 4 5 N HIS A 78 ? N HIS A 69 O ILE A 145 ? O ILE A 136 A 5 6 O ASN A 144 ? O ASN A 135 N ALA A 130 ? N ALA A 121 A 6 7 O LEU A 129 ? O LEU A 120 N TYR A 30 ? N TYR A 21 A 7 8 N VAL A 29 ? N VAL A 20 O GLY A 172 ? O GLY A 163 # _atom_sites.entry_id 3HQF _atom_sites.fract_transf_matrix[1][1] 0.023172 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023172 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.003942 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -8 ? ? ? A . n A 1 2 ARG 2 -7 ? ? ? A . n A 1 3 GLY 3 -6 ? ? ? A . n A 1 4 SER 4 -5 ? ? ? A . n A 1 5 HIS 5 -4 ? ? ? A . n A 1 6 HIS 6 -3 ? ? ? A . n A 1 7 HIS 7 -2 ? ? ? A . n A 1 8 HIS 8 -1 ? ? ? A . n A 1 9 HIS 9 0 0 HIS HIS A . n A 1 10 HIS 10 1 1 HIS HIS A . n A 1 11 GLY 11 2 2 GLY GLY A . n A 1 12 SER 12 3 3 SER SER A . n A 1 13 SER 13 4 4 SER SER A . n A 1 14 VAL 14 5 5 VAL VAL A . n A 1 15 PHE 15 6 6 PHE PHE A . n A 1 16 HIS 16 7 7 HIS HIS A . n A 1 17 ASN 17 8 8 ASN ASN A . n A 1 18 TRP 18 9 9 TRP TRP A . n A 1 19 LEU 19 10 10 LEU LEU A . n A 1 20 LEU 20 11 11 LEU LEU A . n A 1 21 GLU 21 12 12 GLU GLU A . n A 1 22 ILE 22 13 13 ILE ILE A . n A 1 23 ALA 23 14 14 ALA ALA A . n A 1 24 CYS 24 15 15 CYS CYS A . n A 1 25 GLU 25 16 16 GLU GLU A . n A 1 26 ASN 26 17 17 ASN ASN A . n A 1 27 TYR 27 18 18 TYR TYR A . n A 1 28 PHE 28 19 19 PHE PHE A . n A 1 29 VAL 29 20 20 VAL VAL A . n A 1 30 TYR 30 21 21 TYR TYR A . n A 1 31 ILE 31 22 22 ILE ILE A . n A 1 32 LYS 32 23 23 LYS LYS A . n A 1 33 ARG 33 24 24 ARG ARG A . n A 1 34 LEU 34 25 25 LEU LEU A . n A 1 35 SER 35 26 26 SER SER A . n A 1 36 ALA 36 27 27 ALA ALA A . n A 1 37 ASN 37 28 28 ASN ASN A . n A 1 38 ASP 38 29 29 ASP ASP A . n A 1 39 THR 39 30 30 THR THR A . n A 1 40 GLY 40 31 31 GLY GLY A . n A 1 41 ALA 41 32 32 ALA ALA A . n A 1 42 THR 42 33 33 THR THR A . n A 1 43 GLY 43 34 34 GLY GLY A . n A 1 44 GLY 44 35 35 GLY GLY A . n A 1 45 HIS 45 36 36 HIS HIS A . n A 1 46 GLN 46 37 37 GLN GLN A . n A 1 47 VAL 47 38 38 VAL VAL A . n A 1 48 GLY 48 39 39 GLY GLY A . n A 1 49 LEU 49 40 40 LEU LEU A . n A 1 50 TYR 50 41 41 TYR TYR A . n A 1 51 ILE 51 42 42 ILE ILE A . n A 1 52 PRO 52 43 43 PRO PRO A . n A 1 53 SER 53 44 44 SER SER A . n A 1 54 GLY 54 45 45 GLY GLY A . n A 1 55 ILE 55 46 46 ILE ILE A . n A 1 56 VAL 56 47 47 VAL VAL A . n A 1 57 GLU 57 48 48 GLU GLU A . n A 1 58 LYS 58 49 49 LYS LYS A . n A 1 59 LEU 59 50 50 LEU LEU A . n A 1 60 PHE 60 51 51 PHE PHE A . n A 1 61 PRO 61 52 52 PRO PRO A . n A 1 62 SER 62 53 53 SER SER A . n A 1 63 ILE 63 54 54 ILE ILE A . n A 1 64 ASN 64 55 55 ASN ASN A . n A 1 65 HIS 65 56 56 HIS HIS A . n A 1 66 THR 66 57 57 THR THR A . n A 1 67 ARG 67 58 58 ARG ARG A . n A 1 68 GLU 68 59 59 GLU GLU A . n A 1 69 LEU 69 60 60 LEU LEU A . n A 1 70 ASN 70 61 61 ASN ASN A . n A 1 71 PRO 71 62 62 PRO PRO A . n A 1 72 SER 72 63 63 SER SER A . n A 1 73 VAL 73 64 64 VAL VAL A . n A 1 74 PHE 74 65 65 PHE PHE A . n A 1 75 LEU 75 66 66 LEU LEU A . n A 1 76 THR 76 67 67 THR THR A . n A 1 77 ALA 77 68 68 ALA ALA A . n A 1 78 HIS 78 69 69 HIS HIS A . n A 1 79 VAL 79 70 70 VAL VAL A . n A 1 80 SER 80 71 71 SER SER A . n A 1 81 SER 81 72 72 SER SER A . n A 1 82 HIS 82 73 73 HIS HIS A . n A 1 83 ASP 83 74 74 ASP ASP A . n A 1 84 CYS 84 75 75 CYS CYS A . n A 1 85 PRO 85 76 76 PRO PRO A . n A 1 86 ASP 86 77 77 ASP ASP A . n A 1 87 SER 87 78 78 SER SER A . n A 1 88 GLU 88 79 79 GLU GLU A . n A 1 89 ALA 89 80 80 ALA ALA A . n A 1 90 ARG 90 81 81 ARG ARG A . n A 1 91 ALA 91 82 82 ALA ALA A . n A 1 92 ILE 92 83 83 ILE ILE A . n A 1 93 TYR 93 84 84 TYR TYR A . n A 1 94 TYR 94 85 85 TYR TYR A . n A 1 95 ASN 95 86 86 ASN ASN A . n A 1 96 SER 96 87 87 SER SER A . n A 1 97 ARG 97 88 88 ARG ARG A . n A 1 98 HIS 98 89 89 HIS HIS A . n A 1 99 PHE 99 90 90 PHE PHE A . n A 1 100 GLY 100 91 91 GLY GLY A . n A 1 101 LYS 101 92 92 LYS LYS A . n A 1 102 THR 102 93 93 THR THR A . n A 1 103 ARG 103 94 94 ARG ARG A . n A 1 104 ASN 104 95 95 ASN ASN A . n A 1 105 GLU 105 96 96 GLU GLU A . n A 1 106 LYS 106 97 97 LYS LYS A . n A 1 107 ARG 107 98 98 ARG ARG A . n A 1 108 ILE 108 99 99 ILE ILE A . n A 1 109 THR 109 100 100 THR THR A . n A 1 110 ARG 110 101 101 ARG ARG A . n A 1 111 TRP 111 102 102 TRP TRP A . n A 1 112 GLY 112 103 103 GLY GLY A . n A 1 113 ARG 113 104 104 ARG ARG A . n A 1 114 GLY 114 105 105 GLY GLY A . n A 1 115 SER 115 106 106 SER SER A . n A 1 116 PRO 116 107 107 PRO PRO A . n A 1 117 LEU 117 108 108 LEU LEU A . n A 1 118 GLN 118 109 109 GLN GLN A . n A 1 119 ASP 119 110 110 ASP ASP A . n A 1 120 PRO 120 111 111 PRO PRO A . n A 1 121 GLU 121 112 112 GLU GLU A . n A 1 122 ASN 122 113 113 ASN ASN A . n A 1 123 THR 123 114 114 THR THR A . n A 1 124 GLY 124 115 115 GLY GLY A . n A 1 125 ALA 125 116 116 ALA ALA A . n A 1 126 LEU 126 117 117 LEU LEU A . n A 1 127 THR 127 118 118 THR THR A . n A 1 128 LEU 128 119 119 LEU LEU A . n A 1 129 LEU 129 120 120 LEU LEU A . n A 1 130 ALA 130 121 121 ALA ALA A . n A 1 131 PHE 131 122 122 PHE PHE A . n A 1 132 LYS 132 123 123 LYS LYS A . n A 1 133 LEU 133 124 124 LEU LEU A . n A 1 134 ASP 134 125 125 ASP ASP A . n A 1 135 GLU 135 126 126 GLU GLU A . n A 1 136 GLN 136 127 127 GLN GLN A . n A 1 137 GLY 137 128 128 GLY GLY A . n A 1 138 GLY 138 129 129 GLY GLY A . n A 1 139 ASP 139 130 130 ASP ASP A . n A 1 140 CYS 140 131 131 CYS CYS A . n A 1 141 LYS 141 132 132 LYS LYS A . n A 1 142 GLU 142 133 133 GLU GLU A . n A 1 143 VAL 143 134 134 VAL VAL A . n A 1 144 ASN 144 135 135 ASN ASN A . n A 1 145 ILE 145 136 136 ILE ILE A . n A 1 146 TRP 146 137 137 TRP TRP A . n A 1 147 VAL 147 138 138 VAL VAL A . n A 1 148 CYS 148 139 139 CYS CYS A . n A 1 149 ALA 149 140 140 ALA ALA A . n A 1 150 SER 150 141 141 SER SER A . n A 1 151 THR 151 142 142 THR THR A . n A 1 152 ASP 152 143 143 ASP ASP A . n A 1 153 GLU 153 144 144 GLU GLU A . n A 1 154 GLU 154 145 145 GLU GLU A . n A 1 155 ASP 155 146 146 ASP ASP A . n A 1 156 VAL 156 147 147 VAL VAL A . n A 1 157 ILE 157 148 148 ILE ILE A . n A 1 158 GLU 158 149 149 GLU GLU A . n A 1 159 THR 159 150 150 THR THR A . n A 1 160 ALA 160 151 151 ALA ALA A . n A 1 161 ILE 161 152 152 ILE ILE A . n A 1 162 GLY 162 153 153 GLY GLY A . n A 1 163 GLU 163 154 154 GLU GLU A . n A 1 164 VAL 164 155 155 VAL VAL A . n A 1 165 ILE 165 156 156 ILE ILE A . n A 1 166 PRO 166 157 157 PRO PRO A . n A 1 167 GLY 167 158 158 GLY GLY A . n A 1 168 ALA 168 159 159 ALA ALA A . n A 1 169 LEU 169 160 160 LEU LEU A . n A 1 170 ILE 170 161 161 ILE ILE A . n A 1 171 SER 171 162 162 SER SER A . n A 1 172 GLY 172 163 163 GLY GLY A . n A 1 173 PRO 173 164 164 PRO PRO A . n A 1 174 ALA 174 165 165 ALA ALA A . n A 1 175 GLY 175 166 166 GLY GLY A . n A 1 176 GLN 176 167 167 GLN GLN A . n A 1 177 ILE 177 168 168 ILE ILE A . n A 1 178 LEU 178 169 169 LEU LEU A . n A 1 179 GLY 179 170 170 GLY GLY A . n A 1 180 GLY 180 171 171 GLY GLY A . n A 1 181 LEU 181 172 172 LEU LEU A . n B 2 1 DG 1 -4 -4 DG DG B . n B 2 2 DC 2 -3 -3 DC DC B . n B 2 3 DC 3 -2 -2 DC DC B . n B 2 4 DC 4 -1 -1 DC DC B . n B 2 5 DT 5 0 0 DT DT B . n B 2 6 DG 6 1 1 DG DG B . n B 2 7 DG 7 2 2 DG DG B . n B 2 8 DC 8 3 3 DC DC B . n B 2 9 DG 9 4 4 DG DG B . n C 3 1 DC 1 -4 -4 DC DC C . n C 3 2 DG 2 -3 -3 DG DG C . n C 3 3 DC 3 -2 -2 DC DC C . n C 3 4 DC 4 -1 -1 DC DC C . n C 3 5 DA 5 0 0 DA DA C . n C 3 6 DG 6 1 1 DG DG C . n C 3 7 DG 7 2 2 DG DG C . n C 3 8 DG 8 3 3 DG DG C . n C 3 9 DC 9 4 4 DC DC C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 HOH 1 173 173 HOH HOH A . D 4 HOH 2 174 174 HOH HOH A . D 4 HOH 3 175 175 HOH HOH A . D 4 HOH 4 176 176 HOH HOH A . D 4 HOH 5 177 177 HOH HOH A . D 4 HOH 6 178 178 HOH HOH A . D 4 HOH 7 179 179 HOH HOH A . D 4 HOH 8 180 180 HOH HOH A . D 4 HOH 9 181 181 HOH HOH A . D 4 HOH 10 182 182 HOH HOH A . D 4 HOH 11 183 183 HOH HOH A . D 4 HOH 12 184 184 HOH HOH A . D 4 HOH 13 185 185 HOH HOH A . D 4 HOH 14 186 186 HOH HOH A . D 4 HOH 15 187 187 HOH HOH A . D 4 HOH 16 188 188 HOH HOH A . D 4 HOH 17 189 189 HOH HOH A . D 4 HOH 18 190 190 HOH HOH A . D 4 HOH 19 191 191 HOH HOH A . D 4 HOH 20 192 192 HOH HOH A . D 4 HOH 21 193 193 HOH HOH A . D 4 HOH 22 194 194 HOH HOH A . D 4 HOH 23 195 195 HOH HOH A . D 4 HOH 24 196 196 HOH HOH A . D 4 HOH 25 197 197 HOH HOH A . D 4 HOH 26 198 198 HOH HOH A . D 4 HOH 27 199 199 HOH HOH A . D 4 HOH 28 200 200 HOH HOH A . D 4 HOH 29 201 201 HOH HOH A . D 4 HOH 30 202 202 HOH HOH A . D 4 HOH 31 203 203 HOH HOH A . D 4 HOH 32 204 204 HOH HOH A . D 4 HOH 33 205 205 HOH HOH A . D 4 HOH 34 206 206 HOH HOH A . D 4 HOH 35 207 207 HOH HOH A . D 4 HOH 36 208 208 HOH HOH A . D 4 HOH 37 209 209 HOH HOH A . D 4 HOH 38 210 210 HOH HOH A . D 4 HOH 39 211 211 HOH HOH A . D 4 HOH 40 212 212 HOH HOH A . D 4 HOH 41 213 213 HOH HOH A . D 4 HOH 42 214 214 HOH HOH A . D 4 HOH 43 215 215 HOH HOH A . D 4 HOH 44 216 216 HOH HOH A . D 4 HOH 45 217 217 HOH HOH A . D 4 HOH 46 218 218 HOH HOH A . D 4 HOH 47 219 219 HOH HOH A . D 4 HOH 48 220 220 HOH HOH A . D 4 HOH 49 221 221 HOH HOH A . D 4 HOH 50 222 222 HOH HOH A . D 4 HOH 51 223 223 HOH HOH A . D 4 HOH 52 224 224 HOH HOH A . D 4 HOH 53 225 225 HOH HOH A . D 4 HOH 54 226 226 HOH HOH A . D 4 HOH 55 227 227 HOH HOH A . D 4 HOH 56 228 228 HOH HOH A . D 4 HOH 57 229 229 HOH HOH A . D 4 HOH 58 230 230 HOH HOH A . D 4 HOH 59 231 231 HOH HOH A . D 4 HOH 60 232 232 HOH HOH A . D 4 HOH 61 233 233 HOH HOH A . D 4 HOH 62 234 234 HOH HOH A . D 4 HOH 63 235 235 HOH HOH A . D 4 HOH 64 236 236 HOH HOH A . D 4 HOH 65 237 237 HOH HOH A . D 4 HOH 66 238 238 HOH HOH A . D 4 HOH 67 239 239 HOH HOH A . D 4 HOH 68 240 240 HOH HOH A . D 4 HOH 69 241 241 HOH HOH A . D 4 HOH 70 242 242 HOH HOH A . D 4 HOH 71 243 243 HOH HOH A . D 4 HOH 72 244 244 HOH HOH A . D 4 HOH 73 245 245 HOH HOH A . D 4 HOH 74 246 246 HOH HOH A . D 4 HOH 75 247 247 HOH HOH A . D 4 HOH 76 248 248 HOH HOH A . D 4 HOH 77 249 249 HOH HOH A . D 4 HOH 78 250 250 HOH HOH A . D 4 HOH 79 251 251 HOH HOH A . D 4 HOH 80 252 252 HOH HOH A . D 4 HOH 81 253 253 HOH HOH A . D 4 HOH 82 254 254 HOH HOH A . D 4 HOH 83 255 255 HOH HOH A . D 4 HOH 84 256 256 HOH HOH A . D 4 HOH 85 257 257 HOH HOH A . D 4 HOH 86 258 258 HOH HOH A . D 4 HOH 87 259 259 HOH HOH A . D 4 HOH 88 260 260 HOH HOH A . D 4 HOH 89 261 261 HOH HOH A . D 4 HOH 90 262 262 HOH HOH A . D 4 HOH 91 263 263 HOH HOH A . E 4 HOH 1 5 5 HOH HOH B . E 4 HOH 2 6 6 HOH HOH B . E 4 HOH 3 14 14 HOH HOH B . E 4 HOH 4 19 19 HOH HOH B . E 4 HOH 5 27 27 HOH HOH B . E 4 HOH 6 29 29 HOH HOH B . E 4 HOH 7 31 31 HOH HOH B . E 4 HOH 8 32 32 HOH HOH B . E 4 HOH 9 44 44 HOH HOH B . E 4 HOH 10 49 49 HOH HOH B . E 4 HOH 11 52 52 HOH HOH B . E 4 HOH 12 71 71 HOH HOH B . E 4 HOH 13 73 73 HOH HOH B . E 4 HOH 14 75 75 HOH HOH B . E 4 HOH 15 102 102 HOH HOH B . E 4 HOH 16 104 104 HOH HOH B . E 4 HOH 17 105 105 HOH HOH B . E 4 HOH 18 107 107 HOH HOH B . E 4 HOH 19 108 108 HOH HOH B . E 4 HOH 20 109 109 HOH HOH B . E 4 HOH 21 112 112 HOH HOH B . E 4 HOH 22 113 113 HOH HOH B . E 4 HOH 23 127 127 HOH HOH B . E 4 HOH 24 128 128 HOH HOH B . E 4 HOH 25 129 129 HOH HOH B . E 4 HOH 26 132 132 HOH HOH B . E 4 HOH 27 133 133 HOH HOH B . E 4 HOH 28 137 137 HOH HOH B . E 4 HOH 29 138 138 HOH HOH B . E 4 HOH 30 139 139 HOH HOH B . E 4 HOH 31 143 143 HOH HOH B . E 4 HOH 32 164 164 HOH HOH B . F 4 HOH 1 24 24 HOH HOH C . F 4 HOH 2 25 25 HOH HOH C . F 4 HOH 3 26 26 HOH HOH C . F 4 HOH 4 36 36 HOH HOH C . F 4 HOH 5 46 46 HOH HOH C . F 4 HOH 6 55 55 HOH HOH C . F 4 HOH 7 58 58 HOH HOH C . F 4 HOH 8 59 59 HOH HOH C . F 4 HOH 9 63 63 HOH HOH C . F 4 HOH 10 66 66 HOH HOH C . F 4 HOH 11 72 72 HOH HOH C . F 4 HOH 12 74 74 HOH HOH C . F 4 HOH 13 82 82 HOH HOH C . F 4 HOH 14 88 88 HOH HOH C . F 4 HOH 15 91 91 HOH HOH C . F 4 HOH 16 95 95 HOH HOH C . F 4 HOH 17 96 96 HOH HOH C . F 4 HOH 18 101 101 HOH HOH C . F 4 HOH 19 110 110 HOH HOH C . F 4 HOH 20 111 111 HOH HOH C . F 4 HOH 21 114 114 HOH HOH C . F 4 HOH 22 126 126 HOH HOH C . F 4 HOH 23 134 134 HOH HOH C . F 4 HOH 24 135 135 HOH HOH C . F 4 HOH 25 136 136 HOH HOH C . F 4 HOH 26 140 140 HOH HOH C . F 4 HOH 27 141 141 HOH HOH C . F 4 HOH 28 142 142 HOH HOH C . F 4 HOH 29 144 144 HOH HOH C . F 4 HOH 30 155 155 HOH HOH C . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3240 ? 1 MORE -20 ? 1 'SSA (A^2)' 9690 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-09-22 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Refinement description' 3 2 'Structure model' 'Version format compliance' 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Database references' 6 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' diffrn_source 5 3 'Structure model' pdbx_initial_refinement_model 6 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 4 3 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 23.5834 19.7130 39.5871 0.0767 0.0636 0.0965 0.0062 -0.0007 -0.0179 0.8297 0.1862 1.0514 0.3366 -0.1917 -0.2704 -0.0415 0.0001 0.0414 -0.0231 0.0005 -0.0395 -0.0283 0.0072 0.0058 'X-RAY DIFFRACTION' 2 ? refined 10.9621 15.1877 53.1985 0.0683 0.1175 0.0907 -0.0161 0.0203 -0.0323 1.7229 1.1573 3.1387 0.3298 1.1943 -0.4587 0.2159 -0.1298 -0.0860 -0.3047 -0.0452 0.0471 0.1052 -0.0270 -0.2726 'X-RAY DIFFRACTION' 3 ? refined 10.1926 17.7685 52.8155 0.0661 0.1936 0.0964 -0.0056 -0.0146 -0.0334 0.7581 0.7660 0.1820 0.3240 -0.3555 -0.2325 -0.0107 0.0349 -0.0242 -0.0667 0.0582 -0.0915 0.0580 -0.0056 -0.0075 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 0 A 172 ? . . . . ? 'X-RAY DIFFRACTION' 2 1 A 173 A 263 ? . . . . ? 'X-RAY DIFFRACTION' 3 2 B -4 B 4 ? . . . . ? 'X-RAY DIFFRACTION' 4 2 B 5 B 164 ? . . . . ? 'X-RAY DIFFRACTION' 5 3 C -4 C 4 ? . . . . ? 'X-RAY DIFFRACTION' 6 3 C 24 C 155 ? . . . . ? # _pdbx_phasing_MR.entry_id 3HQF _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details ? _pdbx_phasing_MR.R_factor 0.541 _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc 0.234 _pdbx_phasing_MR.correlation_coeff_Io_to_Ic 0.252 _pdbx_phasing_MR.d_res_high_rotation 3.500 _pdbx_phasing_MR.d_res_low_rotation 12.000 _pdbx_phasing_MR.d_res_high_translation 3.500 _pdbx_phasing_MR.d_res_low_translation 12.000 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 1 AMoRE . ? program 'Jorge Navaza' ccp4@ccp4.ac.uk phasing http://www.ccp4.ac.uk/ Fortran_77 ? 2 MOSFLM . ? package 'Andrew G.W. Leslie' andrew@mrc-lmb.cam.ac.uk 'data reduction' http://www.mrc-lmb.cam.ac.uk/harry/mosflm/ ? ? 3 SCALA 3.2.19 22/12/2005 other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 4 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" B DG -4 ? ? "C3'" B DG -4 ? ? 1.369 1.419 -0.050 0.006 N 2 1 "O3'" B DC -2 ? ? "C3'" B DC -2 ? ? 1.370 1.419 -0.049 0.006 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" B DG -4 ? ? "C1'" B DG -4 ? ? N9 B DG -4 ? ? 111.92 108.30 3.62 0.30 N 2 1 N1 B DC -1 ? ? C2 B DC -1 ? ? O2 B DC -1 ? ? 122.73 118.90 3.83 0.60 N 3 1 "O4'" B DT 0 ? ? "C4'" B DT 0 ? ? "C3'" B DT 0 ? ? 101.95 104.50 -2.55 0.40 N 4 1 "O4'" B DG 1 ? ? "C1'" B DG 1 ? ? "C2'" B DG 1 ? ? 109.84 106.80 3.04 0.50 N 5 1 "O4'" B DG 2 ? ? "C1'" B DG 2 ? ? N9 B DG 2 ? ? 111.44 108.30 3.14 0.30 N 6 1 "O4'" C DC -4 ? ? "C1'" C DC -4 ? ? N1 C DC -4 ? ? 103.59 108.00 -4.41 0.70 N 7 1 "C5'" C DG -3 ? ? "C4'" C DG -3 ? ? "C3'" C DG -3 ? ? 99.17 114.10 -14.93 1.80 N 8 1 "O4'" C DG -3 ? ? "C1'" C DG -3 ? ? N9 C DG -3 ? ? 111.66 108.30 3.36 0.30 N 9 1 "O4'" C DC -2 ? ? "C1'" C DC -2 ? ? N1 C DC -2 ? ? 111.92 108.30 3.62 0.30 N 10 1 "O4'" C DC 4 ? ? "C1'" C DC 4 ? ? N1 C DC 4 ? ? 112.21 108.30 3.91 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 1 ? ? 72.35 128.35 2 1 HIS A 36 ? ? -98.45 32.83 3 1 VAL A 38 ? ? 33.66 49.59 4 1 CYS A 75 ? ? -171.34 132.91 5 1 LYS A 92 ? ? -121.14 -142.16 6 1 ASN A 95 ? ? -158.73 68.39 7 1 ARG A 101 ? ? 70.51 49.78 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -8 ? A MET 1 2 1 Y 1 A ARG -7 ? A ARG 2 3 1 Y 1 A GLY -6 ? A GLY 3 4 1 Y 1 A SER -5 ? A SER 4 5 1 Y 1 A HIS -4 ? A HIS 5 6 1 Y 1 A HIS -3 ? A HIS 6 7 1 Y 1 A HIS -2 ? A HIS 7 8 1 Y 1 A HIS -1 ? A HIS 8 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 HOH O O N N 301 HOH H1 H N N 302 HOH H2 H N N 303 ILE N N N N 304 ILE CA C N S 305 ILE C C N N 306 ILE O O N N 307 ILE CB C N S 308 ILE CG1 C N N 309 ILE CG2 C N N 310 ILE CD1 C N N 311 ILE OXT O N N 312 ILE H H N N 313 ILE H2 H N N 314 ILE HA H N N 315 ILE HB H N N 316 ILE HG12 H N N 317 ILE HG13 H N N 318 ILE HG21 H N N 319 ILE HG22 H N N 320 ILE HG23 H N N 321 ILE HD11 H N N 322 ILE HD12 H N N 323 ILE HD13 H N N 324 ILE HXT H N N 325 LEU N N N N 326 LEU CA C N S 327 LEU C C N N 328 LEU O O N N 329 LEU CB C N N 330 LEU CG C N N 331 LEU CD1 C N N 332 LEU CD2 C N N 333 LEU OXT O N N 334 LEU H H N N 335 LEU H2 H N N 336 LEU HA H N N 337 LEU HB2 H N N 338 LEU HB3 H N N 339 LEU HG H N N 340 LEU HD11 H N N 341 LEU HD12 H N N 342 LEU HD13 H N N 343 LEU HD21 H N N 344 LEU HD22 H N N 345 LEU HD23 H N N 346 LEU HXT H N N 347 LYS N N N N 348 LYS CA C N S 349 LYS C C N N 350 LYS O O N N 351 LYS CB C N N 352 LYS CG C N N 353 LYS CD C N N 354 LYS CE C N N 355 LYS NZ N N N 356 LYS OXT O N N 357 LYS H H N N 358 LYS H2 H N N 359 LYS HA H N N 360 LYS HB2 H N N 361 LYS HB3 H N N 362 LYS HG2 H N N 363 LYS HG3 H N N 364 LYS HD2 H N N 365 LYS HD3 H N N 366 LYS HE2 H N N 367 LYS HE3 H N N 368 LYS HZ1 H N N 369 LYS HZ2 H N N 370 LYS HZ3 H N N 371 LYS HXT H N N 372 MET N N N N 373 MET CA C N S 374 MET C C N N 375 MET O O N N 376 MET CB C N N 377 MET CG C N N 378 MET SD S N N 379 MET CE C N N 380 MET OXT O N N 381 MET H H N N 382 MET H2 H N N 383 MET HA H N N 384 MET HB2 H N N 385 MET HB3 H N N 386 MET HG2 H N N 387 MET HG3 H N N 388 MET HE1 H N N 389 MET HE2 H N N 390 MET HE3 H N N 391 MET HXT H N N 392 PHE N N N N 393 PHE CA C N S 394 PHE C C N N 395 PHE O O N N 396 PHE CB C N N 397 PHE CG C Y N 398 PHE CD1 C Y N 399 PHE CD2 C Y N 400 PHE CE1 C Y N 401 PHE CE2 C Y N 402 PHE CZ C Y N 403 PHE OXT O N N 404 PHE H H N N 405 PHE H2 H N N 406 PHE HA H N N 407 PHE HB2 H N N 408 PHE HB3 H N N 409 PHE HD1 H N N 410 PHE HD2 H N N 411 PHE HE1 H N N 412 PHE HE2 H N N 413 PHE HZ H N N 414 PHE HXT H N N 415 PRO N N N N 416 PRO CA C N S 417 PRO C C N N 418 PRO O O N N 419 PRO CB C N N 420 PRO CG C N N 421 PRO CD C N N 422 PRO OXT O N N 423 PRO H H N N 424 PRO HA H N N 425 PRO HB2 H N N 426 PRO HB3 H N N 427 PRO HG2 H N N 428 PRO HG3 H N N 429 PRO HD2 H N N 430 PRO HD3 H N N 431 PRO HXT H N N 432 SER N N N N 433 SER CA C N S 434 SER C C N N 435 SER O O N N 436 SER CB C N N 437 SER OG O N N 438 SER OXT O N N 439 SER H H N N 440 SER H2 H N N 441 SER HA H N N 442 SER HB2 H N N 443 SER HB3 H N N 444 SER HG H N N 445 SER HXT H N N 446 THR N N N N 447 THR CA C N S 448 THR C C N N 449 THR O O N N 450 THR CB C N R 451 THR OG1 O N N 452 THR CG2 C N N 453 THR OXT O N N 454 THR H H N N 455 THR H2 H N N 456 THR HA H N N 457 THR HB H N N 458 THR HG1 H N N 459 THR HG21 H N N 460 THR HG22 H N N 461 THR HG23 H N N 462 THR HXT H N N 463 TRP N N N N 464 TRP CA C N S 465 TRP C C N N 466 TRP O O N N 467 TRP CB C N N 468 TRP CG C Y N 469 TRP CD1 C Y N 470 TRP CD2 C Y N 471 TRP NE1 N Y N 472 TRP CE2 C Y N 473 TRP CE3 C Y N 474 TRP CZ2 C Y N 475 TRP CZ3 C Y N 476 TRP CH2 C Y N 477 TRP OXT O N N 478 TRP H H N N 479 TRP H2 H N N 480 TRP HA H N N 481 TRP HB2 H N N 482 TRP HB3 H N N 483 TRP HD1 H N N 484 TRP HE1 H N N 485 TRP HE3 H N N 486 TRP HZ2 H N N 487 TRP HZ3 H N N 488 TRP HH2 H N N 489 TRP HXT H N N 490 TYR N N N N 491 TYR CA C N S 492 TYR C C N N 493 TYR O O N N 494 TYR CB C N N 495 TYR CG C Y N 496 TYR CD1 C Y N 497 TYR CD2 C Y N 498 TYR CE1 C Y N 499 TYR CE2 C Y N 500 TYR CZ C Y N 501 TYR OH O N N 502 TYR OXT O N N 503 TYR H H N N 504 TYR H2 H N N 505 TYR HA H N N 506 TYR HB2 H N N 507 TYR HB3 H N N 508 TYR HD1 H N N 509 TYR HD2 H N N 510 TYR HE1 H N N 511 TYR HE2 H N N 512 TYR HH H N N 513 TYR HXT H N N 514 VAL N N N N 515 VAL CA C N S 516 VAL C C N N 517 VAL O O N N 518 VAL CB C N N 519 VAL CG1 C N N 520 VAL CG2 C N N 521 VAL OXT O N N 522 VAL H H N N 523 VAL H2 H N N 524 VAL HA H N N 525 VAL HB H N N 526 VAL HG11 H N N 527 VAL HG12 H N N 528 VAL HG13 H N N 529 VAL HG21 H N N 530 VAL HG22 H N N 531 VAL HG23 H N N 532 VAL HXT H N N 533 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 MET N CA sing N N 367 MET N H sing N N 368 MET N H2 sing N N 369 MET CA C sing N N 370 MET CA CB sing N N 371 MET CA HA sing N N 372 MET C O doub N N 373 MET C OXT sing N N 374 MET CB CG sing N N 375 MET CB HB2 sing N N 376 MET CB HB3 sing N N 377 MET CG SD sing N N 378 MET CG HG2 sing N N 379 MET CG HG3 sing N N 380 MET SD CE sing N N 381 MET CE HE1 sing N N 382 MET CE HE2 sing N N 383 MET CE HE3 sing N N 384 MET OXT HXT sing N N 385 PHE N CA sing N N 386 PHE N H sing N N 387 PHE N H2 sing N N 388 PHE CA C sing N N 389 PHE CA CB sing N N 390 PHE CA HA sing N N 391 PHE C O doub N N 392 PHE C OXT sing N N 393 PHE CB CG sing N N 394 PHE CB HB2 sing N N 395 PHE CB HB3 sing N N 396 PHE CG CD1 doub Y N 397 PHE CG CD2 sing Y N 398 PHE CD1 CE1 sing Y N 399 PHE CD1 HD1 sing N N 400 PHE CD2 CE2 doub Y N 401 PHE CD2 HD2 sing N N 402 PHE CE1 CZ doub Y N 403 PHE CE1 HE1 sing N N 404 PHE CE2 CZ sing Y N 405 PHE CE2 HE2 sing N N 406 PHE CZ HZ sing N N 407 PHE OXT HXT sing N N 408 PRO N CA sing N N 409 PRO N CD sing N N 410 PRO N H sing N N 411 PRO CA C sing N N 412 PRO CA CB sing N N 413 PRO CA HA sing N N 414 PRO C O doub N N 415 PRO C OXT sing N N 416 PRO CB CG sing N N 417 PRO CB HB2 sing N N 418 PRO CB HB3 sing N N 419 PRO CG CD sing N N 420 PRO CG HG2 sing N N 421 PRO CG HG3 sing N N 422 PRO CD HD2 sing N N 423 PRO CD HD3 sing N N 424 PRO OXT HXT sing N N 425 SER N CA sing N N 426 SER N H sing N N 427 SER N H2 sing N N 428 SER CA C sing N N 429 SER CA CB sing N N 430 SER CA HA sing N N 431 SER C O doub N N 432 SER C OXT sing N N 433 SER CB OG sing N N 434 SER CB HB2 sing N N 435 SER CB HB3 sing N N 436 SER OG HG sing N N 437 SER OXT HXT sing N N 438 THR N CA sing N N 439 THR N H sing N N 440 THR N H2 sing N N 441 THR CA C sing N N 442 THR CA CB sing N N 443 THR CA HA sing N N 444 THR C O doub N N 445 THR C OXT sing N N 446 THR CB OG1 sing N N 447 THR CB CG2 sing N N 448 THR CB HB sing N N 449 THR OG1 HG1 sing N N 450 THR CG2 HG21 sing N N 451 THR CG2 HG22 sing N N 452 THR CG2 HG23 sing N N 453 THR OXT HXT sing N N 454 TRP N CA sing N N 455 TRP N H sing N N 456 TRP N H2 sing N N 457 TRP CA C sing N N 458 TRP CA CB sing N N 459 TRP CA HA sing N N 460 TRP C O doub N N 461 TRP C OXT sing N N 462 TRP CB CG sing N N 463 TRP CB HB2 sing N N 464 TRP CB HB3 sing N N 465 TRP CG CD1 doub Y N 466 TRP CG CD2 sing Y N 467 TRP CD1 NE1 sing Y N 468 TRP CD1 HD1 sing N N 469 TRP CD2 CE2 doub Y N 470 TRP CD2 CE3 sing Y N 471 TRP NE1 CE2 sing Y N 472 TRP NE1 HE1 sing N N 473 TRP CE2 CZ2 sing Y N 474 TRP CE3 CZ3 doub Y N 475 TRP CE3 HE3 sing N N 476 TRP CZ2 CH2 doub Y N 477 TRP CZ2 HZ2 sing N N 478 TRP CZ3 CH2 sing Y N 479 TRP CZ3 HZ3 sing N N 480 TRP CH2 HH2 sing N N 481 TRP OXT HXT sing N N 482 TYR N CA sing N N 483 TYR N H sing N N 484 TYR N H2 sing N N 485 TYR CA C sing N N 486 TYR CA CB sing N N 487 TYR CA HA sing N N 488 TYR C O doub N N 489 TYR C OXT sing N N 490 TYR CB CG sing N N 491 TYR CB HB2 sing N N 492 TYR CB HB3 sing N N 493 TYR CG CD1 doub Y N 494 TYR CG CD2 sing Y N 495 TYR CD1 CE1 sing Y N 496 TYR CD1 HD1 sing N N 497 TYR CD2 CE2 doub Y N 498 TYR CD2 HD2 sing N N 499 TYR CE1 CZ doub Y N 500 TYR CE1 HE1 sing N N 501 TYR CE2 CZ sing Y N 502 TYR CE2 HE2 sing N N 503 TYR CZ OH sing N N 504 TYR OH HH sing N N 505 TYR OXT HXT sing N N 506 VAL N CA sing N N 507 VAL N H sing N N 508 VAL N H2 sing N N 509 VAL CA C sing N N 510 VAL CA CB sing N N 511 VAL CA HA sing N N 512 VAL C O doub N N 513 VAL C OXT sing N N 514 VAL CB CG1 sing N N 515 VAL CB CG2 sing N N 516 VAL CB HB sing N N 517 VAL CG1 HG11 sing N N 518 VAL CG1 HG12 sing N N 519 VAL CG1 HG13 sing N N 520 VAL CG2 HG21 sing N N 521 VAL CG2 HG22 sing N N 522 VAL CG2 HG23 sing N N 523 VAL OXT HXT sing N N 524 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3HQF 'double helix' 3HQF 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 1 1_555 C DC 9 1_555 -0.029 -0.199 -0.138 -0.861 -5.518 -4.374 1 B_DG-4:DC4_C B -4 ? C 4 ? 19 1 1 B DC 2 1_555 C DG 8 1_555 0.331 -0.060 0.060 -4.890 -7.778 -3.009 2 B_DC-3:DG3_C B -3 ? C 3 ? 19 1 1 B DC 3 1_555 C DG 7 1_555 0.002 -0.123 0.538 -12.227 -13.618 -2.453 3 B_DC-2:DG2_C B -2 ? C 2 ? 19 1 1 B DC 4 1_555 C DG 6 1_555 -0.087 -0.136 -0.003 -6.177 6.212 -1.985 4 B_DC-1:DG1_C B -1 ? C 1 ? 19 1 1 B DT 5 1_555 C DA 5 1_555 -0.186 -0.290 0.285 0.255 -5.233 3.805 5 B_DT0:DA0_C B 0 ? C 0 ? 20 1 1 B DG 6 1_555 C DC 4 1_555 -0.248 -0.084 0.043 18.052 14.061 -1.742 6 B_DG1:DC-1_C B 1 ? C -1 ? 19 1 1 B DG 7 1_555 C DC 3 1_555 -0.199 -0.090 -0.288 -2.807 -14.230 -1.531 7 B_DG2:DC-2_C B 2 ? C -2 ? 19 1 1 B DC 8 1_555 C DG 2 1_555 0.244 -0.052 0.380 -10.356 -0.042 -0.904 8 B_DC3:DG-3_C B 3 ? C -3 ? 19 1 1 B DG 9 1_555 C DC 1 1_555 -0.157 -0.074 0.096 6.981 -6.819 -0.657 9 B_DG4:DC-4_C B 4 ? C -4 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 1 1_555 C DC 9 1_555 B DC 2 1_555 C DG 8 1_555 -0.164 -0.942 3.435 -2.174 -2.555 30.587 -1.244 -0.144 3.503 -4.826 4.105 30.766 1 BB_DG-4DC-3:DG3DC4_CC B -4 ? C 4 ? B -3 ? C 3 ? 1 B DC 2 1_555 C DG 8 1_555 B DC 3 1_555 C DG 7 1_555 -0.786 -0.450 3.549 -4.259 -3.122 35.435 -0.236 0.601 3.641 -5.095 6.949 35.814 2 BB_DC-3DC-2:DG2DG3_CC B -3 ? C 3 ? B -2 ? C 2 ? 1 B DC 3 1_555 C DG 7 1_555 B DC 4 1_555 C DG 6 1_555 1.430 0.424 3.298 8.981 2.595 33.230 0.284 -0.918 3.575 4.429 -15.331 34.484 3 BB_DC-2DC-1:DG1DG2_CC B -2 ? C 2 ? B -1 ? C 1 ? 1 B DC 4 1_555 C DG 6 1_555 B DT 5 1_555 C DA 5 1_555 0.767 -0.678 3.357 -5.117 -1.993 32.559 -0.850 -2.230 3.237 -3.524 9.047 33.006 4 BB_DC-1DT0:DA0DG1_CC B -1 ? C 1 ? B 0 ? C 0 ? 1 B DT 5 1_555 C DA 5 1_555 B DG 6 1_555 C DC 4 1_555 -1.083 -1.254 2.846 0.350 5.031 24.388 -4.162 2.599 2.525 11.748 -0.818 24.897 5 BB_DT0DG1:DC-1DA0_CC B 0 ? C 0 ? B 1 ? C -1 ? 1 B DG 6 1_555 C DC 4 1_555 B DG 7 1_555 C DC 3 1_555 0.010 -1.176 4.069 4.384 3.552 36.438 -2.451 0.714 3.916 5.639 -6.959 36.858 6 BB_DG1DG2:DC-2DC-1_CC B 1 ? C -1 ? B 2 ? C -2 ? 1 B DG 7 1_555 C DC 3 1_555 B DC 8 1_555 C DG 2 1_555 -0.607 -0.831 3.425 -6.913 0.688 34.463 -1.487 -0.092 3.461 1.147 11.523 35.135 7 BB_DG2DC3:DG-3DC-2_CC B 2 ? C -2 ? B 3 ? C -3 ? 1 B DC 8 1_555 C DG 2 1_555 B DG 9 1_555 C DC 1 1_555 -0.136 0.268 2.905 0.798 7.319 28.925 -0.849 0.414 2.879 14.360 -1.565 29.828 8 BB_DC3DG4:DC-4DG-3_CC B 3 ? C -3 ? B 4 ? C -4 ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1NA6 _pdbx_initial_refinement_model.details 'PDB ENTRY 1NA6' #