HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 12-JUN-09 3HTR TITLE CRYSTAL STRUCTURE OF PRC-BARREL DOMAIN PROTEIN FROM RHODOPSEUDOMONAS TITLE 2 PALUSTRIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PRC-BARREL DOMAIN PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHODOPSEUDOMONAS PALUSTRIS; SOURCE 3 ORGANISM_TAXID: 1076; SOURCE 4 STRAIN: CGA0009; SOURCE 5 GENE: RPA4758; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG19 KEYWDS BETA-BARREL, PHOTO-REACTION-CENTER DOMAIN, STRUCTURAL GENOMICS, PSI- KEYWDS 2 2, PROTEIN STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUCTURAL KEYWDS 3 GENOMICS, MCSG, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR Y.KIM,C.TESAR,R.JEDRZEJCZAK,J.KINNEY,G.BABNIGG,C.HARWOOD,C.KERFELD, AUTHOR 2 A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL GENOMICS (MCSG) REVDAT 4 27-NOV-24 3HTR 1 REMARK LINK REVDAT 3 15-DEC-09 3HTR 1 AUTHOR REVDAT 2 21-JUL-09 3HTR 1 AUTHOR REVDAT 1 07-JUL-09 3HTR 0 JRNL AUTH Y.KIM,C.TESAR,R.JEDRZEJCZAK,J.KINNEY,G.BABNIGG,C.HARWOOD, JRNL AUTH 2 C.KERFELD,A.JOACHIMIAK JRNL TITL CRYSTAL STRUCTURE OF PRC-BARREL DOMAIN PROTEIN FROM JRNL TITL 2 RHODOPSEUDOMONAS PALUSTRIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.06 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.4_58) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.06 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.01 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.4 REMARK 3 NUMBER OF REFLECTIONS : 11254 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1125 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.0161 - 4.1094 0.99 1379 162 0.1714 0.1936 REMARK 3 2 4.1094 - 3.2633 0.99 1361 148 0.1706 0.1976 REMARK 3 3 3.2633 - 2.8513 0.99 1337 146 0.1928 0.2667 REMARK 3 4 2.8513 - 2.5908 0.97 1350 145 0.2126 0.2634 REMARK 3 5 2.5908 - 2.4052 0.96 1330 149 0.2235 0.2717 REMARK 3 6 2.4052 - 2.2635 0.89 1197 133 0.2327 0.2837 REMARK 3 7 2.2635 - 2.1501 0.82 1116 126 0.2388 0.2895 REMARK 3 8 2.1501 - 2.0566 0.77 1059 116 0.2289 0.2533 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.35 REMARK 3 B_SOL : 55.04 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.25 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 25.48960 REMARK 3 B22 (A**2) : -15.94360 REMARK 3 B33 (A**2) : -9.54610 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 14.07190 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : 16.460 NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): -8.0220 27.2350 53.2163 REMARK 3 T TENSOR REMARK 3 T11: 0.2004 T22: 0.2463 REMARK 3 T33: 0.2451 T12: -0.0054 REMARK 3 T13: -0.0172 T23: -0.0270 REMARK 3 L TENSOR REMARK 3 L11: 0.3457 L22: 0.8075 REMARK 3 L33: 1.3272 L12: -0.0090 REMARK 3 L13: -0.3379 L23: 0.5020 REMARK 3 S TENSOR REMARK 3 S11: 0.0388 S12: 0.0100 S13: 0.0183 REMARK 3 S21: 0.3249 S22: 0.0209 S23: 0.0878 REMARK 3 S31: 0.0739 S32: -0.0040 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): -5.5186 11.0507 37.2694 REMARK 3 T TENSOR REMARK 3 T11: 0.3243 T22: 0.2690 REMARK 3 T33: 0.3067 T12: 0.0177 REMARK 3 T13: 0.0269 T23: -0.0086 REMARK 3 L TENSOR REMARK 3 L11: 0.4129 L22: 1.2199 REMARK 3 L33: 1.6122 L12: -0.3146 REMARK 3 L13: -0.1918 L23: 0.6037 REMARK 3 S TENSOR REMARK 3 S11: -0.0569 S12: 0.0038 S13: -0.0332 REMARK 3 S21: -0.1338 S22: 0.0063 S23: -0.0724 REMARK 3 S31: 0.3325 S32: 0.0349 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3HTR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-JUN-09. REMARK 100 THE DEPOSITION ID IS D_1000053572. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-JUN-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9794 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11619 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.060 REMARK 200 RESOLUTION RANGE LOW (A) : 28.010 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 200 DATA REDUNDANCY : 5.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.10800 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.06 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 78.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.34800 REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE, PHENIX, RESOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 33.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.86 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS-PROPANE PH 7.0, 1.3 M REMARK 280 DI-AMMONIUM TARTRATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 31.53050 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3260 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10850 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -138.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MSE A 1 REMARK 465 THR A 2 REMARK 465 ASP A 101 REMARK 465 TRP A 102 REMARK 465 ARG A 103 REMARK 465 GLY A 104 REMARK 465 ALA A 105 REMARK 465 ARG A 106 REMARK 465 LYS A 107 REMARK 465 VAL A 108 REMARK 465 ASP A 109 REMARK 465 ASP A 110 REMARK 465 TYR A 111 REMARK 465 TYR A 112 REMARK 465 GLY A 113 REMARK 465 VAL A 114 REMARK 465 ALA A 115 REMARK 465 LEU A 116 REMARK 465 THR A 117 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 MSE B 1 REMARK 465 THR B 2 REMARK 465 LYS B 93 REMARK 465 TYR B 94 REMARK 465 GLY B 95 REMARK 465 PRO B 96 REMARK 465 GLY B 97 REMARK 465 SER B 98 REMARK 465 GLU B 99 REMARK 465 TRP B 100 REMARK 465 ASP B 101 REMARK 465 TRP B 102 REMARK 465 ARG B 103 REMARK 465 GLY B 104 REMARK 465 ALA B 105 REMARK 465 ARG B 106 REMARK 465 LYS B 107 REMARK 465 VAL B 108 REMARK 465 ASP B 109 REMARK 465 ASP B 110 REMARK 465 TYR B 111 REMARK 465 TYR B 112 REMARK 465 GLY B 113 REMARK 465 VAL B 114 REMARK 465 ALA B 115 REMARK 465 LEU B 116 REMARK 465 THR B 117 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD1 ASP A 86 O HOH A 122 2557 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU B 56 105.50 -45.77 REMARK 500 MSE B 82 75.81 -100.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 118 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 4 OE2 REMARK 620 2 GLU A 4 OE1 54.0 REMARK 620 3 GLU B 34 OE1 131.7 95.3 REMARK 620 4 ASP B 60 OD2 115.4 168.7 89.8 REMARK 620 5 HIS B 62 NE2 115.7 86.4 95.3 103.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 118 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 7 OE2 REMARK 620 2 GLU A 7 OE1 54.3 REMARK 620 3 ACY A 120 O 114.9 85.9 REMARK 620 4 HOH A 122 O 94.4 109.3 150.3 REMARK 620 5 HOH A 133 O 82.2 136.1 110.8 76.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 119 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 34 OE1 REMARK 620 2 ASP A 60 OD2 101.8 REMARK 620 3 HIS A 62 NE2 99.2 97.3 REMARK 620 4 GLU B 4 OE2 124.6 119.1 110.0 REMARK 620 5 GLU B 4 OE1 84.3 169.4 90.2 50.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 119 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ACY A 121 OXT REMARK 620 2 GLU B 7 OE2 89.6 REMARK 620 3 ACY B 120 OXT 114.8 109.4 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 118 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 119 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY A 120 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY A 121 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 118 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 119 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY B 120 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC92237 RELATED DB: TARGETDB DBREF 3HTR A 1 117 UNP Q6N0K4 Q6N0K4_RHOPA 1 117 DBREF 3HTR B 1 117 UNP Q6N0K4 Q6N0K4_RHOPA 1 117 SEQADV 3HTR SER A -2 UNP Q6N0K4 EXPRESSION TAG SEQADV 3HTR ASN A -1 UNP Q6N0K4 EXPRESSION TAG SEQADV 3HTR ALA A 0 UNP Q6N0K4 EXPRESSION TAG SEQADV 3HTR SER B -2 UNP Q6N0K4 EXPRESSION TAG SEQADV 3HTR ASN B -1 UNP Q6N0K4 EXPRESSION TAG SEQADV 3HTR ALA B 0 UNP Q6N0K4 EXPRESSION TAG SEQRES 1 A 120 SER ASN ALA MSE THR PRO GLU THR ASN GLU THR LEU LYS SEQRES 2 A 120 LEU ILE GLY SER ASP LYS VAL GLN GLY THR ALA VAL TYR SEQRES 3 A 120 GLY PRO ASP GLY GLU LYS ILE GLY SER ILE GLU ARG VAL SEQRES 4 A 120 MSE ILE GLU LYS VAL SER GLY ARG VAL SER TYR ALA VAL SEQRES 5 A 120 LEU SER PHE GLY GLY PHE LEU GLY ILE GLY ASP ASP HIS SEQRES 6 A 120 TYR PRO LEU PRO TRP PRO ALA LEU LYS TYR ASN VAL GLU SEQRES 7 A 120 LEU GLY GLY TYR GLN VAL MSE VAL THR VAL ASP GLN LEU SEQRES 8 A 120 GLU ARG ALA PRO LYS TYR GLY PRO GLY SER GLU TRP ASP SEQRES 9 A 120 TRP ARG GLY ALA ARG LYS VAL ASP ASP TYR TYR GLY VAL SEQRES 10 A 120 ALA LEU THR SEQRES 1 B 120 SER ASN ALA MSE THR PRO GLU THR ASN GLU THR LEU LYS SEQRES 2 B 120 LEU ILE GLY SER ASP LYS VAL GLN GLY THR ALA VAL TYR SEQRES 3 B 120 GLY PRO ASP GLY GLU LYS ILE GLY SER ILE GLU ARG VAL SEQRES 4 B 120 MSE ILE GLU LYS VAL SER GLY ARG VAL SER TYR ALA VAL SEQRES 5 B 120 LEU SER PHE GLY GLY PHE LEU GLY ILE GLY ASP ASP HIS SEQRES 6 B 120 TYR PRO LEU PRO TRP PRO ALA LEU LYS TYR ASN VAL GLU SEQRES 7 B 120 LEU GLY GLY TYR GLN VAL MSE VAL THR VAL ASP GLN LEU SEQRES 8 B 120 GLU ARG ALA PRO LYS TYR GLY PRO GLY SER GLU TRP ASP SEQRES 9 B 120 TRP ARG GLY ALA ARG LYS VAL ASP ASP TYR TYR GLY VAL SEQRES 10 B 120 ALA LEU THR MODRES 3HTR MSE A 37 MET SELENOMETHIONINE MODRES 3HTR MSE A 82 MET SELENOMETHIONINE MODRES 3HTR MSE B 37 MET SELENOMETHIONINE MODRES 3HTR MSE B 82 MET SELENOMETHIONINE HET MSE A 37 8 HET MSE A 82 16 HET MSE B 37 8 HET MSE B 82 16 HET ZN A 118 1 HET ZN A 119 1 HET ACY A 120 4 HET ACY A 121 4 HET ZN B 118 1 HET ZN B 119 1 HET ACY B 120 4 HETNAM MSE SELENOMETHIONINE HETNAM ZN ZINC ION HETNAM ACY ACETIC ACID FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 3 ZN 4(ZN 2+) FORMUL 5 ACY 3(C2 H4 O2) FORMUL 10 HOH *56(H2 O) HELIX 1 1 SER A 14 GLN A 18 1 5 HELIX 2 2 PRO A 66 LEU A 70 5 5 HELIX 3 3 THR A 84 ARG A 90 1 7 HELIX 4 4 SER B 14 GLN B 18 1 5 HELIX 5 5 PRO B 66 LEU B 70 5 5 HELIX 6 6 THR B 84 ARG B 90 1 7 SHEET 1 A 4 LEU A 11 GLY A 13 0 SHEET 2 A 4 MSE B 37 GLU B 39 -1 O ILE B 38 N ILE A 12 SHEET 3 A 4 VAL B 45 PHE B 52 -1 O SER B 46 N MSE B 37 SHEET 4 A 4 ASP B 61 LEU B 65 -1 O ASP B 61 N PHE B 52 SHEET 1 B 7 LEU A 11 GLY A 13 0 SHEET 2 B 7 MSE B 37 GLU B 39 -1 O ILE B 38 N ILE A 12 SHEET 3 B 7 VAL B 45 PHE B 52 -1 O SER B 46 N MSE B 37 SHEET 4 B 7 LYS B 29 ILE B 33 -1 N SER B 32 O SER B 51 SHEET 5 B 7 ALA B 21 TYR B 23 -1 N VAL B 22 O ILE B 30 SHEET 6 B 7 GLY B 78 GLN B 80 1 O TYR B 79 N TYR B 23 SHEET 7 B 7 LYS B 71 ASN B 73 -1 N ASN B 73 O GLY B 78 SHEET 1 C 6 ASP A 61 LEU A 65 0 SHEET 2 C 6 VAL A 45 PHE A 52 -1 N PHE A 52 O ASP A 61 SHEET 3 C 6 LYS A 29 GLU A 39 -1 N ARG A 35 O VAL A 49 SHEET 4 C 6 ALA A 21 TYR A 23 -1 N VAL A 22 O ILE A 30 SHEET 5 C 6 GLY A 78 GLN A 80 1 O TYR A 79 N TYR A 23 SHEET 6 C 6 LYS A 71 ASN A 73 -1 N ASN A 73 O GLY A 78 SHEET 1 D 4 ASP A 61 LEU A 65 0 SHEET 2 D 4 VAL A 45 PHE A 52 -1 N PHE A 52 O ASP A 61 SHEET 3 D 4 LYS A 29 GLU A 39 -1 N ARG A 35 O VAL A 49 SHEET 4 D 4 LEU B 11 GLY B 13 -1 O ILE B 12 N ILE A 38 LINK C VAL A 36 N MSE A 37 1555 1555 1.32 LINK C MSE A 37 N ILE A 38 1555 1555 1.34 LINK C VAL A 81 N AMSE A 82 1555 1555 1.33 LINK C VAL A 81 N BMSE A 82 1555 1555 1.33 LINK C AMSE A 82 N VAL A 83 1555 1555 1.33 LINK C BMSE A 82 N VAL A 83 1555 1555 1.33 LINK C AVAL B 36 N MSE B 37 1555 1555 1.32 LINK C BVAL B 36 N MSE B 37 1555 1555 1.33 LINK C MSE B 37 N ILE B 38 1555 1555 1.33 LINK C VAL B 81 N AMSE B 82 1555 1555 1.32 LINK C VAL B 81 N BMSE B 82 1555 1555 1.33 LINK C AMSE B 82 N VAL B 83 1555 1555 1.33 LINK C BMSE B 82 N VAL B 83 1555 1555 1.33 LINK OE2 GLU A 4 ZN ZN B 118 1555 1555 2.11 LINK OE1 GLU A 4 ZN ZN B 118 1555 1555 2.61 LINK OE2 GLU A 7 ZN ZN A 118 1555 1555 2.12 LINK OE1 GLU A 7 ZN ZN A 118 1555 1555 2.58 LINK OE1 GLU A 34 ZN ZN A 119 1555 1555 2.15 LINK OD2 ASP A 60 ZN ZN A 119 1555 1555 2.13 LINK NE2 HIS A 62 ZN ZN A 119 1555 1555 1.98 LINK ZN ZN A 118 O ACY A 120 1555 1555 2.04 LINK ZN ZN A 118 O HOH A 122 1555 1555 2.06 LINK ZN ZN A 118 O HOH A 133 1555 1555 2.44 LINK ZN ZN A 119 OE2 GLU B 4 1555 1555 2.43 LINK ZN ZN A 119 OE1 GLU B 4 1555 1555 2.66 LINK OXT ACY A 121 ZN ZN B 119 1555 1555 2.53 LINK OE2 GLU B 7 ZN ZN B 119 1555 1555 2.03 LINK OE1 GLU B 34 ZN ZN B 118 1555 1555 2.15 LINK OD2 ASP B 60 ZN ZN B 118 1555 1555 2.15 LINK NE2 HIS B 62 ZN ZN B 118 1555 1555 1.99 LINK ZN ZN B 119 OXT ACY B 120 1555 1555 2.11 SITE 1 AC1 5 GLU A 7 ACY A 120 HOH A 122 HOH A 133 SITE 2 AC1 5 HOH A 138 SITE 1 AC2 4 GLU A 34 ASP A 60 HIS A 62 GLU B 4 SITE 1 AC3 8 GLU A 7 ILE A 12 LYS A 16 TYR A 72 SITE 2 AC3 8 TYR A 79 ZN A 118 HOH A 133 HOH A 138 SITE 1 AC4 5 LYS A 40 GLU B 7 TYR B 72 ZN B 119 SITE 2 AC4 5 ACY B 120 SITE 1 AC5 5 GLU A 4 GLU B 34 GLY B 57 ASP B 60 SITE 2 AC5 5 HIS B 62 SITE 1 AC6 3 ACY A 121 GLU B 7 ACY B 120 SITE 1 AC7 7 ACY A 121 GLU B 7 ILE B 12 LYS B 16 SITE 2 AC7 7 TYR B 72 TYR B 79 ZN B 119 CRYST1 25.644 63.061 61.866 90.00 99.39 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.038995 0.000000 0.006447 0.00000 SCALE2 0.000000 0.015858 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016383 0.00000