HEADER OXIDOREDUCTASE, METAL BINDING PROTEIN 17-JUN-09 3HW7 TITLE HIGH PRESSURE (0.57 GPA) CRYSTAL STRUCTURE OF BOVINE COPPER, ZINC TITLE 2 SUPEROXIDE DISMUTASE AT 2.0 ANGSTROMS COMPND MOL_ID: 1; COMPND 2 MOLECULE: SUPEROXIDE DISMUTASE [CU-ZN]; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.15.1.1 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: BOVINE; SOURCE 4 ORGANISM_TAXID: 9913; SOURCE 5 CELL: ERYTHROCYTES KEYWDS BOVINE, SUPEROXIDE DISMUTASE, HIGH PRESSURE, FLEXIBLE ELECTROSTATIC KEYWDS 2 LOOP, ANTIOXIDANT, DISULFIDE BOND, METAL-BINDING, OXIDOREDUCTASE, KEYWDS 3 METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR I.ASCONE,C.SAVINO REVDAT 3 01-NOV-23 3HW7 1 REMARK LINK REVDAT 2 18-APR-12 3HW7 1 JRNL VERSN REVDAT 1 23-JUN-10 3HW7 0 JRNL AUTH I.ASCONE,C.SAVINO,R.KAHN,R.FOURME JRNL TITL FLEXIBILITY OF THE CU,ZN SUPEROXIDE DISMUTASE STRUCTURE JRNL TITL 2 INVESTIGATED AT 0.57 GPA JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 66 654 2010 JRNL REFN ISSN 0907-4449 JRNL PMID 20516618 JRNL DOI 10.1107/S0907444910012321 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.89 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 90.4 REMARK 3 NUMBER OF REFLECTIONS : 20848 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1121 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1464 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 87.13 REMARK 3 BIN R VALUE (WORKING SET) : 0.1990 REMARK 3 BIN FREE R VALUE SET COUNT : 73 REMARK 3 BIN FREE R VALUE : 0.2730 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2184 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 206 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.21 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.68000 REMARK 3 B22 (A**2) : -0.98000 REMARK 3 B33 (A**2) : -0.70000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.167 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.156 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.097 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.439 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.932 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2222 ; 0.014 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3006 ; 1.513 ; 1.950 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 300 ; 6.273 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 90 ;37.914 ;25.333 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 358 ;14.772 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;13.551 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 340 ; 0.100 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1688 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1159 ; 0.189 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1497 ; 0.305 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 173 ; 0.127 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 12 ; 0.070 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 39 ; 0.162 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 17 ; 0.179 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1500 ; 1.084 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2354 ; 1.725 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 770 ; 2.919 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 652 ; 4.315 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3HW7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-JUN-09. REMARK 100 THE DEPOSITION ID IS D_1000053656. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JUN-05 REMARK 200 TEMPERATURE (KELVIN) : 298.0 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 4 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID27 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.331 REMARK 200 MONOCHROMATOR : SI(111)MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22012 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 19.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.0 REMARK 200 DATA REDUNDANCY : 5.800 REMARK 200 R MERGE (I) : 0.11100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 83.1 REMARK 200 DATA REDUNDANCY IN SHELL : 4.70 REMARK 200 R MERGE FOR SHELL (I) : 0.31300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CCP4 REMARK 200 STARTING MODEL: PDB ENTRY 1CBJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 6, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.42250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 73.18850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 25.25450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 73.18850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.42250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 25.25450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1450 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS B 6 CB CYS B 6 SG -0.106 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP B 96 89.52 -152.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU1 A 152 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 44 ND1 REMARK 620 2 HIS A 46 NE2 139.3 REMARK 620 3 HIS A 118 NE2 101.4 118.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 153 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 61 ND1 REMARK 620 2 HIS A 69 ND1 100.0 REMARK 620 3 HIS A 78 ND1 113.6 121.9 REMARK 620 4 ASP A 81 OD2 103.7 99.1 115.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU1 B 152 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 44 ND1 REMARK 620 2 HIS B 46 NE2 137.7 REMARK 620 3 HIS B 118 NE2 93.7 116.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 153 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 44 ND1 REMARK 620 2 HIS B 46 NE2 124.5 REMARK 620 3 HIS B 61 NE2 93.6 106.1 REMARK 620 4 HIS B 118 NE2 85.7 90.9 159.6 REMARK 620 5 HOH B 398 O 138.1 97.2 75.3 91.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 154 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 61 ND1 REMARK 620 2 HIS B 69 ND1 109.7 REMARK 620 3 HIS B 78 ND1 110.9 120.9 REMARK 620 4 ASP B 81 OD1 99.9 95.7 117.1 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU1 A 152 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 153 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU1 B 152 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU B 153 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 154 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1CBJ RELATED DB: PDB REMARK 900 THE SAME PROTEIN CRYSTAL, MESUREMENTS AT ATMOSPHERIC PRESSURE AND REMARK 900 ROOM TEMPERATURE DBREF 3HW7 A 1 151 UNP P00442 SODC_BOVIN 2 152 DBREF 3HW7 B 1 151 UNP P00442 SODC_BOVIN 2 152 SEQRES 1 A 151 ALA THR LYS ALA VAL CYS VAL LEU LYS GLY ASP GLY PRO SEQRES 2 A 151 VAL GLN GLY THR ILE HIS PHE GLU ALA LYS GLY ASP THR SEQRES 3 A 151 VAL VAL VAL THR GLY SER ILE THR GLY LEU THR GLU GLY SEQRES 4 A 151 ASP HIS GLY PHE HIS VAL HIS GLN PHE GLY ASP ASN THR SEQRES 5 A 151 GLN GLY CYS THR SER ALA GLY PRO HIS PHE ASN PRO LEU SEQRES 6 A 151 SER LYS LYS HIS GLY GLY PRO LYS ASP GLU GLU ARG HIS SEQRES 7 A 151 VAL GLY ASP LEU GLY ASN VAL THR ALA ASP LYS ASN GLY SEQRES 8 A 151 VAL ALA ILE VAL ASP ILE VAL ASP PRO LEU ILE SER LEU SEQRES 9 A 151 SER GLY GLU TYR SER ILE ILE GLY ARG THR MET VAL VAL SEQRES 10 A 151 HIS GLU LYS PRO ASP ASP LEU GLY ARG GLY GLY ASN GLU SEQRES 11 A 151 GLU SER THR LYS THR GLY ASN ALA GLY SER ARG LEU ALA SEQRES 12 A 151 CYS GLY VAL ILE GLY ILE ALA LYS SEQRES 1 B 151 ALA THR LYS ALA VAL CYS VAL LEU LYS GLY ASP GLY PRO SEQRES 2 B 151 VAL GLN GLY THR ILE HIS PHE GLU ALA LYS GLY ASP THR SEQRES 3 B 151 VAL VAL VAL THR GLY SER ILE THR GLY LEU THR GLU GLY SEQRES 4 B 151 ASP HIS GLY PHE HIS VAL HIS GLN PHE GLY ASP ASN THR SEQRES 5 B 151 GLN GLY CYS THR SER ALA GLY PRO HIS PHE ASN PRO LEU SEQRES 6 B 151 SER LYS LYS HIS GLY GLY PRO LYS ASP GLU GLU ARG HIS SEQRES 7 B 151 VAL GLY ASP LEU GLY ASN VAL THR ALA ASP LYS ASN GLY SEQRES 8 B 151 VAL ALA ILE VAL ASP ILE VAL ASP PRO LEU ILE SER LEU SEQRES 9 B 151 SER GLY GLU TYR SER ILE ILE GLY ARG THR MET VAL VAL SEQRES 10 B 151 HIS GLU LYS PRO ASP ASP LEU GLY ARG GLY GLY ASN GLU SEQRES 11 B 151 GLU SER THR LYS THR GLY ASN ALA GLY SER ARG LEU ALA SEQRES 12 B 151 CYS GLY VAL ILE GLY ILE ALA LYS HET CU1 A 152 1 HET ZN A 153 1 HET CU1 B 152 1 HET CU B 153 1 HET ZN B 154 1 HETNAM CU1 COPPER (I) ION HETNAM ZN ZINC ION HETNAM CU COPPER (II) ION FORMUL 3 CU1 2(CU 1+) FORMUL 4 ZN 2(ZN 2+) FORMUL 6 CU CU 2+ FORMUL 8 HOH *206(H2 O) HELIX 1 1 GLN A 53 GLY A 59 5 7 HELIX 2 2 GLU A 131 GLY A 136 1 6 HELIX 3 3 GLN B 53 GLY B 59 5 7 HELIX 4 4 SER B 105 SER B 109 5 5 HELIX 5 5 GLU B 131 GLY B 136 1 6 SHEET 1 A 5 ALA A 93 ASP A 99 0 SHEET 2 A 5 THR A 26 THR A 34 -1 N VAL A 29 O ILE A 97 SHEET 3 A 5 GLN A 15 LYS A 23 -1 N HIS A 19 O THR A 30 SHEET 4 A 5 LYS A 3 LEU A 8 -1 N ALA A 4 O PHE A 20 SHEET 5 A 5 GLY A 148 ILE A 149 -1 O GLY A 148 N VAL A 5 SHEET 1 B 4 ASP A 81 ALA A 87 0 SHEET 2 B 4 GLY A 39 HIS A 46 -1 N GLY A 39 O ALA A 87 SHEET 3 B 4 THR A 114 HIS A 118 -1 O THR A 114 N HIS A 46 SHEET 4 B 4 ARG A 141 VAL A 146 -1 O GLY A 145 N MET A 115 SHEET 1 C 5 ALA B 93 ASP B 99 0 SHEET 2 C 5 THR B 26 THR B 34 -1 N VAL B 29 O ILE B 97 SHEET 3 C 5 GLN B 15 LYS B 23 -1 N HIS B 19 O THR B 30 SHEET 4 C 5 LYS B 3 LEU B 8 -1 N CYS B 6 O ILE B 18 SHEET 5 C 5 GLY B 148 ILE B 149 -1 O GLY B 148 N VAL B 5 SHEET 1 D 4 ASP B 81 ALA B 87 0 SHEET 2 D 4 GLY B 39 HIS B 46 -1 N GLY B 39 O ALA B 87 SHEET 3 D 4 THR B 114 HIS B 118 -1 O THR B 114 N HIS B 46 SHEET 4 D 4 ARG B 141 VAL B 146 -1 O ALA B 143 N VAL B 117 SSBOND 1 CYS A 55 CYS A 144 1555 1555 2.06 SSBOND 2 CYS B 55 CYS B 144 1555 1555 2.09 LINK ND1 HIS A 44 CU CU1 A 152 1555 1555 2.02 LINK NE2 HIS A 46 CU CU1 A 152 1555 1555 2.05 LINK ND1 HIS A 61 ZN ZN A 153 1555 1555 2.05 LINK ND1 HIS A 69 ZN ZN A 153 1555 1555 2.03 LINK ND1 HIS A 78 ZN ZN A 153 1555 1555 1.96 LINK OD2 ASP A 81 ZN ZN A 153 1555 1555 1.98 LINK NE2 HIS A 118 CU CU1 A 152 1555 1555 2.03 LINK ND1 HIS B 44 CU ACU1 B 152 1555 1555 2.12 LINK ND1 HIS B 44 CU B CU B 153 1555 1555 2.01 LINK NE2 HIS B 46 CU ACU1 B 152 1555 1555 1.90 LINK NE2 HIS B 46 CU B CU B 153 1555 1555 2.23 LINK NE2 HIS B 61 CU B CU B 153 1555 1555 2.01 LINK ND1 HIS B 61 ZN ZN B 154 1555 1555 1.98 LINK ND1 HIS B 69 ZN ZN B 154 1555 1555 2.00 LINK ND1 HIS B 78 ZN ZN B 154 1555 1555 2.09 LINK OD1 ASP B 81 ZN ZN B 154 1555 1555 2.01 LINK NE2 HIS B 118 CU ACU1 B 152 1555 1555 1.91 LINK NE2 HIS B 118 CU B CU B 153 1555 1555 2.31 LINK CU B CU B 153 O HOH B 398 1555 1555 2.56 SITE 1 AC1 4 HIS A 44 HIS A 46 HIS A 61 HIS A 118 SITE 1 AC2 4 HIS A 61 HIS A 69 HIS A 78 ASP A 81 SITE 1 AC3 4 HIS B 44 HIS B 46 HIS B 61 HIS B 118 SITE 1 AC4 5 HIS B 44 HIS B 46 HIS B 61 HIS B 118 SITE 2 AC4 5 HOH B 398 SITE 1 AC5 5 HIS B 61 HIS B 69 HIS B 78 ASP B 81 SITE 2 AC5 5 LYS B 134 CRYST1 46.845 50.509 146.377 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021347 0.000000 0.000000 0.00000 SCALE2 0.000000 0.019798 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006832 0.00000