HEADER TRANSPORT PROTEIN 19-JUN-09 3HX3 TITLE CRYSTAL STRUCTURE OF CRALBP MUTANT R234W COMPND MOL_ID: 1; COMPND 2 MOLECULE: RETINALDEHYDE-BINDING PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CELLULAR RETINALDEHYDE-BINDING PROTEIN; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CRALBP, RLBP1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS LIPID TRANSFER PROTEIN, 11-CIS-RETINAL, BOTHNIA DYSTROPHY, KEYWDS 2 ACETYLATION, CYTOPLASM, DISEASE MUTATION, RETINITIS PIGMENTOSA, KEYWDS 3 RETINOL-BINDING, SENSORY TRANSDUCTION, TRANSPORT, VISION, TRANSPORT KEYWDS 4 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.STOCKER,X.HE,J.LOBSIGER REVDAT 3 13-OCT-21 3HX3 1 REMARK SEQADV LINK REVDAT 2 24-NOV-09 3HX3 1 JRNL REVDAT 1 20-OCT-09 3HX3 0 JRNL AUTH X.HE,J.LOBSIGER,A.STOCKER JRNL TITL BOTHNIA DYSTROPHY IS CAUSED BY DOMINO-LIKE REARRANGEMENTS IN JRNL TITL 2 CELLULAR RETINALDEHYDE-BINDING PROTEIN MUTANT R234W. JRNL REF PROC.NATL.ACAD.SCI.USA V. 106 18545 2009 JRNL REFN ISSN 0027-8424 JRNL PMID 19846785 JRNL DOI 10.1073/PNAS.0907454106 REMARK 2 REMARK 2 RESOLUTION. 1.69 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.69 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.58 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 67814 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.184 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.990 REMARK 3 FREE R VALUE TEST SET COUNT : 6775 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.5770 - 5.2560 0.99 2059 228 0.1740 0.1630 REMARK 3 2 5.2560 - 4.1730 1.00 2101 230 0.1390 0.1590 REMARK 3 3 4.1730 - 3.6460 1.00 2064 229 0.1430 0.1540 REMARK 3 4 3.6460 - 3.3130 1.00 2089 233 0.1500 0.1600 REMARK 3 5 3.3130 - 3.0750 1.00 2100 237 0.1600 0.1650 REMARK 3 6 3.0750 - 2.8940 1.00 2059 227 0.1720 0.1770 REMARK 3 7 2.8940 - 2.7490 1.00 2079 232 0.1740 0.1770 REMARK 3 8 2.7490 - 2.6290 1.00 2078 226 0.1710 0.1830 REMARK 3 9 2.6290 - 2.5280 1.00 2133 232 0.1690 0.2140 REMARK 3 10 2.5280 - 2.4410 1.00 2074 230 0.1550 0.1950 REMARK 3 11 2.4410 - 2.3650 1.00 2084 235 0.1670 0.1770 REMARK 3 12 2.3650 - 2.2970 1.00 2072 230 0.1550 0.1880 REMARK 3 13 2.2970 - 2.2370 1.00 2083 233 0.1630 0.1770 REMARK 3 14 2.2370 - 2.1820 1.00 2072 229 0.1640 0.1790 REMARK 3 15 2.1820 - 2.1320 1.00 2088 230 0.1560 0.1900 REMARK 3 16 2.1320 - 2.0870 1.00 2096 235 0.1610 0.1800 REMARK 3 17 2.0870 - 2.0450 1.00 2045 229 0.1620 0.1810 REMARK 3 18 2.0450 - 2.0070 1.00 2105 235 0.1620 0.1780 REMARK 3 19 2.0070 - 1.9710 1.00 2086 233 0.1710 0.1950 REMARK 3 20 1.9710 - 1.9370 1.00 2048 225 0.1670 0.1990 REMARK 3 21 1.9370 - 1.9060 1.00 2118 239 0.1690 0.2070 REMARK 3 22 1.9060 - 1.8770 1.00 1983 223 0.1830 0.2140 REMARK 3 23 1.8770 - 1.8490 1.00 2183 240 0.1840 0.2100 REMARK 3 24 1.8490 - 1.8230 1.00 2023 224 0.1800 0.2220 REMARK 3 25 1.8230 - 1.7980 1.00 2117 233 0.1850 0.2030 REMARK 3 26 1.7980 - 1.7750 1.00 2109 234 0.2100 0.2520 REMARK 3 27 1.7750 - 1.7530 1.00 2000 221 0.2270 0.2400 REMARK 3 28 1.7530 - 1.7320 1.00 2131 236 0.2460 0.2780 REMARK 3 29 1.7320 - 1.7120 0.88 1821 204 0.2640 0.2930 REMARK 3 30 1.7120 - 1.6900 0.45 939 103 0.3360 0.3540 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.35 REMARK 3 B_SOL : 56.97 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.96 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 8.16600 REMARK 3 B22 (A**2) : -3.14800 REMARK 3 B33 (A**2) : -5.01800 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.77800 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 2115 REMARK 3 ANGLE : 1.176 2855 REMARK 3 CHIRALITY : 0.165 301 REMARK 3 PLANARITY : 0.004 375 REMARK 3 DIHEDRAL : 16.824 773 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 57:85) REMARK 3 ORIGIN FOR THE GROUP (A): -14.2475 31.9898 9.0131 REMARK 3 T TENSOR REMARK 3 T11: 0.3203 T22: 0.1459 REMARK 3 T33: 0.2933 T12: 0.1716 REMARK 3 T13: -0.0841 T23: -0.0339 REMARK 3 L TENSOR REMARK 3 L11: 0.6019 L22: -0.3050 REMARK 3 L33: 4.4604 L12: 0.4818 REMARK 3 L13: 0.4186 L23: 0.1675 REMARK 3 S TENSOR REMARK 3 S11: -0.1631 S12: 0.0066 S13: 0.4085 REMARK 3 S21: -0.1645 S22: -0.0556 S23: 0.2029 REMARK 3 S31: -0.9740 S32: -0.2737 S33: 0.2302 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 86:98) REMARK 3 ORIGIN FOR THE GROUP (A): -17.0879 23.5491 13.8514 REMARK 3 T TENSOR REMARK 3 T11: 0.0915 T22: 0.1851 REMARK 3 T33: 0.2869 T12: 0.0990 REMARK 3 T13: 0.0165 T23: -0.0619 REMARK 3 L TENSOR REMARK 3 L11: -0.0307 L22: 2.8101 REMARK 3 L33: 1.9559 L12: -1.4097 REMARK 3 L13: -1.1631 L23: 0.9148 REMARK 3 S TENSOR REMARK 3 S11: 0.0018 S12: 0.2903 S13: -0.4857 REMARK 3 S21: 0.1249 S22: -0.1229 S23: 0.7060 REMARK 3 S31: -0.1689 S32: -0.3467 S33: 0.1384 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 99:143) REMARK 3 ORIGIN FOR THE GROUP (A): -9.7339 16.3670 12.8236 REMARK 3 T TENSOR REMARK 3 T11: 0.0314 T22: 0.1069 REMARK 3 T33: 0.1078 T12: 0.0116 REMARK 3 T13: 0.0321 T23: 0.0063 REMARK 3 L TENSOR REMARK 3 L11: -0.3663 L22: 0.8804 REMARK 3 L33: 1.3570 L12: -0.3089 REMARK 3 L13: 0.4031 L23: -0.0397 REMARK 3 S TENSOR REMARK 3 S11: -0.0161 S12: -0.0367 S13: -0.0065 REMARK 3 S21: 0.0154 S22: -0.0360 S23: 0.2672 REMARK 3 S31: -0.0855 S32: -0.2463 S33: 0.0134 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 144:185) REMARK 3 ORIGIN FOR THE GROUP (A): -3.3216 4.7406 20.5450 REMARK 3 T TENSOR REMARK 3 T11: 0.1075 T22: 0.0407 REMARK 3 T33: 0.0770 T12: -0.0150 REMARK 3 T13: 0.0134 T23: 0.0178 REMARK 3 L TENSOR REMARK 3 L11: 0.9804 L22: 1.7095 REMARK 3 L33: 1.3567 L12: 0.4396 REMARK 3 L13: 0.5881 L23: 0.0503 REMARK 3 S TENSOR REMARK 3 S11: 0.0864 S12: -0.0443 S13: -0.1716 REMARK 3 S21: 0.4000 S22: 0.0295 S23: 0.0470 REMARK 3 S31: 0.1934 S32: -0.0592 S33: -0.1094 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 186:255) REMARK 3 ORIGIN FOR THE GROUP (A): 3.3580 7.3900 15.0643 REMARK 3 T TENSOR REMARK 3 T11: 0.0402 T22: 0.0823 REMARK 3 T33: 0.0721 T12: 0.0121 REMARK 3 T13: 0.0028 T23: 0.0046 REMARK 3 L TENSOR REMARK 3 L11: 0.3725 L22: 1.0938 REMARK 3 L33: 0.6119 L12: -0.0476 REMARK 3 L13: 0.5457 L23: -0.3040 REMARK 3 S TENSOR REMARK 3 S11: 0.0164 S12: 0.1249 S13: 0.0211 REMARK 3 S21: 0.1296 S22: -0.0285 S23: -0.0890 REMARK 3 S31: -0.0247 S32: 0.1434 S33: 0.0109 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 256:295) REMARK 3 ORIGIN FOR THE GROUP (A): 9.1960 8.0610 24.3765 REMARK 3 T TENSOR REMARK 3 T11: 0.1218 T22: 0.0513 REMARK 3 T33: 0.0879 T12: -0.0136 REMARK 3 T13: -0.0469 T23: 0.0131 REMARK 3 L TENSOR REMARK 3 L11: 0.6459 L22: 1.3420 REMARK 3 L33: 0.2042 L12: 0.0970 REMARK 3 L13: 0.6461 L23: 0.3709 REMARK 3 S TENSOR REMARK 3 S11: 0.0173 S12: 0.0575 S13: 0.0063 REMARK 3 S21: 0.4104 S22: 0.0021 S23: -0.1442 REMARK 3 S31: -0.0174 S32: 0.1251 S33: 0.0055 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 296:306) REMARK 3 ORIGIN FOR THE GROUP (A): -11.2110 3.2282 29.1944 REMARK 3 T TENSOR REMARK 3 T11: 0.2483 T22: 0.2475 REMARK 3 T33: 0.1667 T12: -0.0129 REMARK 3 T13: 0.1266 T23: 0.1356 REMARK 3 L TENSOR REMARK 3 L11: 0.0303 L22: -0.8037 REMARK 3 L33: -0.4133 L12: 0.3385 REMARK 3 L13: 1.0908 L23: 0.3452 REMARK 3 S TENSOR REMARK 3 S11: 0.3929 S12: -0.4911 S13: -0.0240 REMARK 3 S21: 0.2935 S22: -0.0225 S23: 0.1425 REMARK 3 S31: -0.2543 S32: -0.2914 S33: -0.3549 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE FRIEDEL PAIRS WERE USED IN PHASING REMARK 3 AND IN REFINEMENT. REMARK 4 REMARK 4 3HX3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-JUN-09. REMARK 100 THE DEPOSITION ID IS D_1000053688. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-SEP-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.97930 REMARK 200 MONOCHROMATOR : SI(111) CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM, XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE, XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 67824 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.690 REMARK 200 RESOLUTION RANGE LOW (A) : 45.577 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 200 DATA REDUNDANCY : 5.600 REMARK 200 R MERGE (I) : 0.04800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.69 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.1 REMARK 200 DATA REDUNDANCY IN SHELL : 4.80 REMARK 200 R MERGE FOR SHELL (I) : 0.57600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER, RESOLVE 2.13 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.81 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3000, NACL, PH 7.5, VAPOR REMARK 280 DIFFUSION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 43.96500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.94000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 43.96500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 28.94000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 401 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 679 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 2 REMARK 465 GLU A 3 REMARK 465 GLY A 4 REMARK 465 VAL A 5 REMARK 465 GLY A 6 REMARK 465 THR A 7 REMARK 465 PHE A 8 REMARK 465 ARG A 9 REMARK 465 MSE A 10 REMARK 465 VAL A 11 REMARK 465 PRO A 12 REMARK 465 GLU A 13 REMARK 465 GLU A 14 REMARK 465 GLU A 15 REMARK 465 GLN A 16 REMARK 465 GLU A 17 REMARK 465 LEU A 18 REMARK 465 ARG A 19 REMARK 465 ALA A 20 REMARK 465 GLN A 21 REMARK 465 LEU A 22 REMARK 465 GLU A 23 REMARK 465 GLN A 24 REMARK 465 LEU A 25 REMARK 465 THR A 26 REMARK 465 THR A 27 REMARK 465 LYS A 28 REMARK 465 ASP A 29 REMARK 465 HIS A 30 REMARK 465 GLY A 31 REMARK 465 PRO A 32 REMARK 465 VAL A 33 REMARK 465 PHE A 34 REMARK 465 GLY A 35 REMARK 465 PRO A 36 REMARK 465 CYS A 37 REMARK 465 SER A 38 REMARK 465 GLN A 39 REMARK 465 LEU A 40 REMARK 465 PRO A 41 REMARK 465 ARG A 42 REMARK 465 HIS A 43 REMARK 465 THR A 44 REMARK 465 LEU A 45 REMARK 465 GLN A 46 REMARK 465 LYS A 47 REMARK 465 ALA A 48 REMARK 465 LYS A 49 REMARK 465 ASP A 50 REMARK 465 GLU A 51 REMARK 465 LEU A 52 REMARK 465 ASN A 53 REMARK 465 GLU A 54 REMARK 465 ARG A 55 REMARK 465 GLU A 56 REMARK 465 GLY A 307 REMARK 465 PRO A 308 REMARK 465 GLN A 309 REMARK 465 ALA A 310 REMARK 465 GLN A 311 REMARK 465 ALA A 312 REMARK 465 GLU A 313 REMARK 465 ASN A 314 REMARK 465 THR A 315 REMARK 465 ALA A 316 REMARK 465 PHE A 317 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE RET A 400 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3HY5 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF CRALBP DBREF 3HX3 A 2 317 UNP P12271 RLBP1_HUMAN 2 317 SEQADV 3HX3 TRP A 234 UNP P12271 ARG 234 ENGINEERED MUTATION SEQRES 1 A 316 SER GLU GLY VAL GLY THR PHE ARG MSE VAL PRO GLU GLU SEQRES 2 A 316 GLU GLN GLU LEU ARG ALA GLN LEU GLU GLN LEU THR THR SEQRES 3 A 316 LYS ASP HIS GLY PRO VAL PHE GLY PRO CYS SER GLN LEU SEQRES 4 A 316 PRO ARG HIS THR LEU GLN LYS ALA LYS ASP GLU LEU ASN SEQRES 5 A 316 GLU ARG GLU GLU THR ARG GLU GLU ALA VAL ARG GLU LEU SEQRES 6 A 316 GLN GLU MSE VAL GLN ALA GLN ALA ALA SER GLY GLU GLU SEQRES 7 A 316 LEU ALA VAL ALA VAL ALA GLU ARG VAL GLN GLU LYS ASP SEQRES 8 A 316 SER GLY PHE PHE LEU ARG PHE ILE ARG ALA ARG LYS PHE SEQRES 9 A 316 ASN VAL GLY ARG ALA TYR GLU LEU LEU ARG GLY TYR VAL SEQRES 10 A 316 ASN PHE ARG LEU GLN TYR PRO GLU LEU PHE ASP SER LEU SEQRES 11 A 316 SER PRO GLU ALA VAL ARG CYS THR ILE GLU ALA GLY TYR SEQRES 12 A 316 PRO GLY VAL LEU SER SER ARG ASP LYS TYR GLY ARG VAL SEQRES 13 A 316 VAL MSE LEU PHE ASN ILE GLU ASN TRP GLN SER GLN GLU SEQRES 14 A 316 ILE THR PHE ASP GLU ILE LEU GLN ALA TYR CYS PHE ILE SEQRES 15 A 316 LEU GLU LYS LEU LEU GLU ASN GLU GLU THR GLN ILE ASN SEQRES 16 A 316 GLY PHE CYS ILE ILE GLU ASN PHE LYS GLY PHE THR MSE SEQRES 17 A 316 GLN GLN ALA ALA SER LEU ARG THR SER ASP LEU ARG LYS SEQRES 18 A 316 MSE VAL ASP MSE LEU GLN ASP SER PHE PRO ALA TRP PHE SEQRES 19 A 316 LYS ALA ILE HIS PHE ILE HIS GLN PRO TRP TYR PHE THR SEQRES 20 A 316 THR THR TYR ASN VAL VAL LYS PRO PHE LEU LYS SER LYS SEQRES 21 A 316 LEU LEU GLU ARG VAL PHE VAL HIS GLY ASP ASP LEU SER SEQRES 22 A 316 GLY PHE TYR GLN GLU ILE ASP GLU ASN ILE LEU PRO SER SEQRES 23 A 316 ASP PHE GLY GLY THR LEU PRO LYS TYR ASP GLY LYS ALA SEQRES 24 A 316 VAL ALA GLU GLN LEU PHE GLY PRO GLN ALA GLN ALA GLU SEQRES 25 A 316 ASN THR ALA PHE MODRES 3HX3 MSE A 69 MET SELENOMETHIONINE MODRES 3HX3 MSE A 159 MET SELENOMETHIONINE MODRES 3HX3 MSE A 209 MET SELENOMETHIONINE MODRES 3HX3 MSE A 223 MET SELENOMETHIONINE MODRES 3HX3 MSE A 226 MET SELENOMETHIONINE HET MSE A 69 8 HET MSE A 159 8 HET MSE A 209 8 HET MSE A 223 8 HET MSE A 226 8 HET RET A 400 21 HETNAM MSE SELENOMETHIONINE HETNAM RET RETINAL FORMUL 1 MSE 5(C5 H11 N O2 SE) FORMUL 2 RET C20 H28 O FORMUL 3 HOH *383(H2 O) HELIX 1 1 GLU A 57 ALA A 75 1 19 HELIX 2 2 GLU A 78 VAL A 88 1 11 HELIX 3 3 ASP A 92 ARG A 103 1 12 HELIX 4 4 ASN A 106 TYR A 124 1 19 HELIX 5 5 PRO A 125 PHE A 128 5 4 HELIX 6 6 SER A 132 ALA A 142 1 11 HELIX 7 7 THR A 172 LEU A 188 1 17 HELIX 8 8 ASN A 190 GLY A 197 1 8 HELIX 9 9 THR A 208 LEU A 215 1 8 HELIX 10 10 ARG A 216 ASP A 229 1 14 HELIX 11 11 TYR A 246 LYS A 255 1 10 HELIX 12 12 PRO A 256 LEU A 258 5 3 HELIX 13 13 LYS A 259 GLU A 264 1 6 HELIX 14 14 LEU A 273 ILE A 280 1 8 HELIX 15 15 ASP A 281 LEU A 285 5 5 HELIX 16 16 PRO A 286 GLY A 290 5 5 HELIX 17 17 GLY A 298 PHE A 306 1 9 SHEET 1 A 5 GLY A 146 VAL A 147 0 SHEET 2 A 5 VAL A 157 ASN A 162 -1 O LEU A 160 N GLY A 146 SHEET 3 A 5 PHE A 198 ASN A 203 1 O CYS A 199 N MSE A 159 SHEET 4 A 5 PHE A 235 ILE A 241 1 O HIS A 239 N GLU A 202 SHEET 5 A 5 VAL A 266 GLY A 270 1 O HIS A 269 N PHE A 240 LINK C GLU A 68 N MSE A 69 1555 1555 1.33 LINK C MSE A 69 N VAL A 70 1555 1555 1.33 LINK C VAL A 158 N MSE A 159 1555 1555 1.33 LINK C MSE A 159 N LEU A 160 1555 1555 1.33 LINK C THR A 208 N MSE A 209 1555 1555 1.33 LINK C MSE A 209 N GLN A 210 1555 1555 1.33 LINK C LYS A 222 N MSE A 223 1555 1555 1.33 LINK C MSE A 223 N VAL A 224 1555 1555 1.33 LINK C ASP A 225 N MSE A 226 1555 1555 1.33 LINK C MSE A 226 N LEU A 227 1555 1555 1.33 CISPEP 1 TYR A 144 PRO A 145 0 -13.68 SITE 1 AC1 6 PHE A 161 PHE A 173 TYR A 180 GLU A 202 SITE 2 AC1 6 LEU A 220 MSE A 223 CRYST1 87.930 57.880 75.150 90.00 122.85 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011373 0.000000 0.007342 0.00000 SCALE2 0.000000 0.017277 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015839 0.00000