HEADER TRANSFERASE 24-JUN-09 3HZS TITLE S. AUREUS MONOFUNCTIONAL GLYCOSYLTRANSFERASE (MTGA)IN COMPLEX WITH TITLE 2 MOENOMYCIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: MONOFUNCTIONAL GLYCOSYLTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: STAPH. AUREUS MONOFUNCTIONAL TRANSGLYCOSYLASE; COMPND 5 SYNONYM: MGT, PEPTIDOGLYCAN TGASE; COMPND 6 EC: 2.4.-.-; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS SUBSP. AUREUS; SOURCE 3 ORGANISM_TAXID: 196620; SOURCE 4 STRAIN: MW2; SOURCE 5 GENE: MGT, MW1814; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)TOLC-; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PPW2-SA0933(2)-N3; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PPW2-SA0933(2)-N3 KEYWDS TRANSGLYCOSYLASE, PEPTIDOGLYCAN, MONOFUNCTIONAL, MOENOMYCIN, CELL KEYWDS 2 MEMBRANE, CELL SHAPE, CELL WALL BIOGENESIS/DEGRADATION, KEYWDS 3 GLYCOSYLTRANSFERASE, MEMBRANE, PEPTIDOGLYCAN SYNTHESIS, TRANSFERASE, KEYWDS 4 TRANSMEMBRANE EXPDTA X-RAY DIFFRACTION AUTHOR H.HEASLET,A.A.MILLER,B.SHAW,A.MISTRY REVDAT 7 03-APR-24 3HZS 1 REMARK REVDAT 6 21-FEB-24 3HZS 1 REMARK REVDAT 5 13-OCT-21 3HZS 1 REMARK SEQADV REVDAT 4 25-JUL-12 3HZS 1 REMARK REVDAT 3 13-JUL-11 3HZS 1 VERSN REVDAT 2 28-JUL-09 3HZS 1 JRNL REVDAT 1 07-JUL-09 3HZS 0 JRNL AUTH H.HEASLET,B.SHAW,A.MISTRY,A.A.MILLER JRNL TITL CHARACTERIZATION OF THE ACTIVE SITE OF S. AUREUS JRNL TITL 2 MONOFUNCTIONAL GLYCOSYLTRANSFERASE (MTG) BY SITE-DIRECTED JRNL TITL 3 MUTATION AND STRUCTURAL ANALYSIS OF THE PROTEIN COMPLEXED JRNL TITL 4 WITH MOENOMYCIN JRNL REF J.STRUCT.BIOL. V. 167 129 2009 JRNL REFN ISSN 1047-8477 JRNL PMID 19416756 JRNL DOI 10.1016/J.JSB.2009.04.010 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.4.0069 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.12 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 18121 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 963 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.16 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1321 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2190 REMARK 3 BIN FREE R VALUE SET COUNT : 75 REMARK 3 BIN FREE R VALUE : 0.2820 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1708 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 105 REMARK 3 SOLVENT ATOMS : 124 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.03 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.03000 REMARK 3 B22 (A**2) : -2.03000 REMARK 3 B33 (A**2) : 3.05000 REMARK 3 B12 (A**2) : -1.02000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.178 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.172 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.120 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.490 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.926 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1891 ; 0.019 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2566 ; 1.800 ; 1.981 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 215 ; 5.865 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 103 ;37.965 ;25.049 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 312 ;14.695 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;21.850 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 278 ; 0.169 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1438 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1064 ; 2.401 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1725 ; 3.675 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 827 ; 5.623 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 841 ; 7.279 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3HZS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-JUN-09. REMARK 100 THE DEPOSITION ID IS D_1000053784. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-SEP-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E DW REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : RIGAKU VARIMAX HF OPTICS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45531 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 23.120 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.17300 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.38100 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: UNPUBLISHED APO STRUCTURE OF MTGA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SA MTGA E100Q AT 10 MG/ML WAS MIXED REMARK 280 WITH 1MM MOENOMYCIN AND 1MM MNCL2 AND INCUBATED ON ICE FOR ~3 REMARK 280 HOURS. PRECIPITATED MATERIAL WAS REMOVED BY CENTRIFUGATION AT 16, REMARK 280 000XG FOR 5 MINUTES. THE MMOENOMYCIN COMPLEX WAS CRYSTALLIZED BY REMARK 280 HANGING DROP VAPOR DIFFUSION, MIXING THE PROTEIN 1:1 WITH A REMARK 280 RESERVOIR SOLUTION CONTAINING 0.1M NA ACETATE PH 4.6, 0.2M NACL, REMARK 280 30% MPD AT 22OC. HEXAGONAL PLATE CRYSTALS FORMED IN 1 WEEK., REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 57.21100 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 33.03079 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 42.94800 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 57.21100 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 33.03079 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 42.94800 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 57.21100 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 33.03079 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 42.94800 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 57.21100 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 33.03079 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 42.94800 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 57.21100 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 33.03079 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 42.94800 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 57.21100 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 33.03079 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 42.94800 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 66.06157 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 85.89600 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 66.06157 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 85.89600 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 66.06157 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 85.89600 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 66.06157 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 85.89600 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 66.06157 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 85.89600 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 66.06157 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 85.89600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27250 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 -114.42200 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -57.21100 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 -99.09236 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O3 PO4 A 1 O HOH A 345 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 101 77.23 -178.69 REMARK 500 ASN A 179 49.58 -154.29 REMARK 500 ALA A 225 66.29 -159.62 REMARK 500 ASN A 253 36.95 72.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 M0E A 901 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE M0E A 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2C6W RELATED DB: PDB REMARK 900 PBP1A APO STRUCTURE REMARK 900 RELATED ID: 2ZC5 RELATED DB: PDB REMARK 900 PBP1A BIAPENEM COMPLEX REMARK 900 RELATED ID: 2OLU RELATED DB: PDB REMARK 900 PBP2 APO STRUCTURE REMARK 900 RELATED ID: 3DWK RELATED DB: PDB REMARK 900 PBP2 APO STRUCTURE REMARK 900 RELATED ID: 2OLV RELATED DB: PDB REMARK 900 PBP2 MOENOMYCIN COMPLEX DBREF 3HZS A 68 268 UNP Q7A0I6 MGT_STAAW 68 268 SEQADV 3HZS ASN A 60 UNP Q7A0I6 EXPRESSION TAG SEQADV 3HZS LEU A 61 UNP Q7A0I6 EXPRESSION TAG SEQADV 3HZS TYR A 62 UNP Q7A0I6 EXPRESSION TAG SEQADV 3HZS PHE A 63 UNP Q7A0I6 EXPRESSION TAG SEQADV 3HZS GLN A 64 UNP Q7A0I6 EXPRESSION TAG SEQADV 3HZS GLY A 65 UNP Q7A0I6 EXPRESSION TAG SEQADV 3HZS HIS A 66 UNP Q7A0I6 EXPRESSION TAG SEQADV 3HZS MET A 67 UNP Q7A0I6 EXPRESSION TAG SEQADV 3HZS GLN A 100 UNP Q7A0I6 GLU 100 ENGINEERED MUTATION SEQRES 1 A 209 ASN LEU TYR PHE GLN GLY HIS MET ASP ASN VAL ASP GLU SEQRES 2 A 209 LEU ARG LYS ILE GLU ASN LYS SER SER PHE VAL SER ALA SEQRES 3 A 209 ASP ASN MET PRO GLU TYR VAL LYS GLY ALA PHE ILE SER SEQRES 4 A 209 MET GLN ASP GLU ARG PHE TYR ASN HIS HIS GLY PHE ASP SEQRES 5 A 209 LEU LYS GLY THR THR ARG ALA LEU PHE SER THR ILE SER SEQRES 6 A 209 ASP ARG ASP VAL GLN GLY GLY SER THR ILE THR GLN GLN SEQRES 7 A 209 VAL VAL LYS ASN TYR PHE TYR ASP ASN ASP ARG SER PHE SEQRES 8 A 209 THR ARG LYS VAL LYS GLU LEU PHE VAL ALA HIS ARG VAL SEQRES 9 A 209 GLU LYS GLN TYR ASN LYS ASN GLU ILE LEU SER PHE TYR SEQRES 10 A 209 LEU ASN ASN ILE TYR PHE GLY ASP ASN GLN TYR THR LEU SEQRES 11 A 209 GLU GLY ALA ALA ASN HIS TYR PHE GLY THR THR VAL ASN SEQRES 12 A 209 LYS ASN SER THR THR MET SER HIS ILE THR VAL LEU GLN SEQRES 13 A 209 SER ALA ILE LEU ALA SER LYS VAL ASN ALA PRO SER VAL SEQRES 14 A 209 TYR ASN ILE ASN ASN MET SER GLU ASN PHE THR GLN ARG SEQRES 15 A 209 VAL SER THR ASN LEU GLU LYS MET LYS GLN GLN ASN TYR SEQRES 16 A 209 ILE ASN GLU THR GLN TYR GLN GLN ALA MET SER GLN LEU SEQRES 17 A 209 ASN HET M0E A 901 100 HET PO4 A 1 5 HETNAM M0E MOENOMYCIN HETNAM PO4 PHOSPHATE ION HETSYN M0E MOENOMYCIN FORMUL 2 M0E C69 H106 N5 O34 P FORMUL 3 PO4 O4 P 3- FORMUL 4 HOH *124(H2 O) HELIX 1 1 ASN A 60 GLN A 64 5 5 HELIX 2 2 ASN A 69 LYS A 79 5 11 HELIX 3 3 SER A 84 MET A 88 5 5 HELIX 4 4 PRO A 89 ASP A 101 1 13 HELIX 5 5 ASP A 111 SER A 121 1 11 HELIX 6 6 THR A 133 PHE A 143 1 11 HELIX 7 7 SER A 149 TYR A 167 1 19 HELIX 8 8 ASN A 168 ASN A 178 1 11 HELIX 9 9 THR A 188 GLY A 198 1 11 HELIX 10 10 THR A 212 VAL A 223 1 12 HELIX 11 11 SER A 235 GLN A 252 1 18 HELIX 12 12 ASN A 256 ASN A 268 1 13 SITE 1 AC1 30 HOH A 6 HOH A 7 HOH A 10 HOH A 39 SITE 2 AC1 30 HOH A 42 HOH A 57 HOH A 59 GLN A 100 SITE 3 AC1 30 GLN A 137 LYS A 140 ASN A 141 ASP A 145 SITE 4 AC1 30 ASP A 147 ARG A 148 SER A 149 LYS A 153 SITE 5 AC1 30 TYR A 181 GLY A 183 ASP A 184 VAL A 223 SITE 6 AC1 30 ASN A 224 ALA A 225 PRO A 226 SER A 227 SITE 7 AC1 30 ASN A 237 HOH A 285 HOH A 320 HOH A 322 SITE 8 AC1 30 HOH A 323 HOH A 325 SITE 1 AC2 8 HIS A 107 HIS A 108 GLY A 109 PHE A 110 SITE 2 AC2 8 ASP A 111 LEU A 112 HOH A 344 HOH A 345 CRYST1 114.422 114.422 128.844 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008740 0.005046 0.000000 0.00000 SCALE2 0.000000 0.010092 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007761 0.00000