data_3I2V # _entry.id 3I2V # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3I2V RCSB RCSB053894 WWPDB D_1000053894 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3I2V _pdbx_database_status.recvd_initial_deposition_date 2009-06-29 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bacik, J.P.' 1 'Walker, J.R.' 2 'Lopez, L.' 3 'Li, Y.' 4 'Weigelt, J.' 5 'Bountra, C.' 6 'Arrowsmith, C.H.' 7 'Edwards, A.M.' 8 'Bochkarev, A.' 9 'Dhe-Paganon, S.' 10 'Structural Genomics Consortium (SGC)' 11 # _citation.id primary _citation.title 'Crystal structure of the human MOCS3 rhodanese-like domain' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Bacik, J.P.' 1 primary 'Walker, J.R.' 2 primary 'Lopez, L.' 3 primary 'Li, Y.' 4 primary 'Weigelt, J.' 5 primary 'Bountra, C.' 6 primary 'Arrowsmith, C.H.' 7 primary 'Edwards, A.M.' 8 primary 'Bochkarev, A.' 9 primary 'Dhe-Paganon, S.' 10 # _cell.entry_id 3I2V _cell.length_a 36.817 _cell.length_b 31.911 _cell.length_c 50.640 _cell.angle_alpha 90.00 _cell.angle_beta 110.16 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3I2V _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Adenylyltransferase and sulfurtransferase MOCS3' 14222.272 1 '2.7.7.-, 2.8.1.-' ? 'RHODANESE-LIKE DOMAIN, residues 335-460' ? 2 water nat water 18.015 186 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Molybdenum cofactor synthesis protein 3, Molybdopterin synthase sulfurylase, MPT synthase sulfurylase, Adenylyltransferase MOCS3, Sulfurtransferase MOCS3 ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SRVSVTDYKRLLDSGAFHLLLDVRPQVEVDICRLPHALHIPLKHLERRDAESLKLLKEAIWEEKQGTQEGAAVPIYVICK LGNDSQKAVKILQSLSAAQELDPLTVRDVVGGL(MSE)AWAAKIDGTFPQY ; _entity_poly.pdbx_seq_one_letter_code_can ;SRVSVTDYKRLLDSGAFHLLLDVRPQVEVDICRLPHALHIPLKHLERRDAESLKLLKEAIWEEKQGTQEGAAVPIYVICK LGNDSQKAVKILQSLSAAQELDPLTVRDVVGGLMAWAAKIDGTFPQY ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ARG n 1 3 VAL n 1 4 SER n 1 5 VAL n 1 6 THR n 1 7 ASP n 1 8 TYR n 1 9 LYS n 1 10 ARG n 1 11 LEU n 1 12 LEU n 1 13 ASP n 1 14 SER n 1 15 GLY n 1 16 ALA n 1 17 PHE n 1 18 HIS n 1 19 LEU n 1 20 LEU n 1 21 LEU n 1 22 ASP n 1 23 VAL n 1 24 ARG n 1 25 PRO n 1 26 GLN n 1 27 VAL n 1 28 GLU n 1 29 VAL n 1 30 ASP n 1 31 ILE n 1 32 CYS n 1 33 ARG n 1 34 LEU n 1 35 PRO n 1 36 HIS n 1 37 ALA n 1 38 LEU n 1 39 HIS n 1 40 ILE n 1 41 PRO n 1 42 LEU n 1 43 LYS n 1 44 HIS n 1 45 LEU n 1 46 GLU n 1 47 ARG n 1 48 ARG n 1 49 ASP n 1 50 ALA n 1 51 GLU n 1 52 SER n 1 53 LEU n 1 54 LYS n 1 55 LEU n 1 56 LEU n 1 57 LYS n 1 58 GLU n 1 59 ALA n 1 60 ILE n 1 61 TRP n 1 62 GLU n 1 63 GLU n 1 64 LYS n 1 65 GLN n 1 66 GLY n 1 67 THR n 1 68 GLN n 1 69 GLU n 1 70 GLY n 1 71 ALA n 1 72 ALA n 1 73 VAL n 1 74 PRO n 1 75 ILE n 1 76 TYR n 1 77 VAL n 1 78 ILE n 1 79 CYS n 1 80 LYS n 1 81 LEU n 1 82 GLY n 1 83 ASN n 1 84 ASP n 1 85 SER n 1 86 GLN n 1 87 LYS n 1 88 ALA n 1 89 VAL n 1 90 LYS n 1 91 ILE n 1 92 LEU n 1 93 GLN n 1 94 SER n 1 95 LEU n 1 96 SER n 1 97 ALA n 1 98 ALA n 1 99 GLN n 1 100 GLU n 1 101 LEU n 1 102 ASP n 1 103 PRO n 1 104 LEU n 1 105 THR n 1 106 VAL n 1 107 ARG n 1 108 ASP n 1 109 VAL n 1 110 VAL n 1 111 GLY n 1 112 GLY n 1 113 LEU n 1 114 MSE n 1 115 ALA n 1 116 TRP n 1 117 ALA n 1 118 ALA n 1 119 LYS n 1 120 ILE n 1 121 ASP n 1 122 GLY n 1 123 THR n 1 124 PHE n 1 125 PRO n 1 126 GLN n 1 127 TYR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'MOCS3, MOCS3_HUMAN, UBA4' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28aLIC _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code MOCS3_HUMAN _struct_ref.pdbx_db_accession O95396 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;RVSVTDYKRLLDSGAFHLLLDVRPQVEVDICRLPHALHIPLKHLERRDAESLKLLKEAIWEEKQGTQEGAAVPIYVICKL GNDSQKAVKILQSLSAAQELDPLTVRDVVGGLMAWAAKIDGTFPQY ; _struct_ref.pdbx_align_begin 335 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3I2V _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 127 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O95396 _struct_ref_seq.db_align_beg 335 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 460 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 126 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3I2V _struct_ref_seq_dif.mon_id SER _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code O95396 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'EXPRESSION TAG' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3I2V _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.96 _exptl_crystal.density_percent_sol 37.36 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.1 M HEPES pH 7.5, 21% PEG3350, VAPOR DIFFUSION, HANGING DROP, temperature 291K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date 2009-06-19 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0720 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 23-ID-B' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 23-ID-B _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0720 # _reflns.entry_id 3I2V _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 24.26 _reflns.d_resolution_high 1.25 _reflns.number_obs 30819 _reflns.number_all ? _reflns.percent_possible_obs 90.7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.063 _reflns.pdbx_netI_over_sigmaI 33.7 _reflns.B_iso_Wilson_estimate 12.61 _reflns.pdbx_redundancy 7.0 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.25 _reflns_shell.d_res_low 1.27 _reflns_shell.percent_possible_all 66.3 _reflns_shell.Rmerge_I_obs 0.617 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.83 _reflns_shell.pdbx_redundancy 5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3I2V _refine.ls_number_reflns_obs 29228 _refine.ls_number_reflns_all 1019 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 24.258 _refine.ls_d_res_high 1.250 _refine.ls_percent_reflns_obs 94.89 _refine.ls_R_factor_obs 0.1614 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1590 _refine.ls_R_factor_R_free 0.2043 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.98 _refine.ls_number_reflns_R_free 1457 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 12.61 _refine.aniso_B[1][1] -0.354 _refine.aniso_B[2][2] -0.384 _refine.aniso_B[3][3] 0.738 _refine.aniso_B[1][2] -0.000 _refine.aniso_B[1][3] 0.330 _refine.aniso_B[2][3] -0.000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.374 _refine.solvent_model_param_bsol 60.255 _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details 'INITIAL DATASET USED TO LOCATE SEMET COLLECTED AT 0.96426 A' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.08 _refine.pdbx_overall_phase_error 20.78 _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 983 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 190 _refine_hist.number_atoms_total 1173 _refine_hist.d_res_high 1.250 _refine_hist.d_res_low 24.258 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.015 ? ? 1004 'X-RAY DIFFRACTION' ? f_angle_d 1.593 ? ? 1369 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 15.521 ? ? 375 'X-RAY DIFFRACTION' ? f_chiral_restr 0.108 ? ? 162 'X-RAY DIFFRACTION' ? f_plane_restr 0.010 ? ? 175 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 1.2500 1.2947 2039 0.2761 71.00 0.3358 . . 101 . . . . 'X-RAY DIFFRACTION' . 1.2947 1.3465 2704 0.1777 93.00 0.2282 . . 130 . . . . 'X-RAY DIFFRACTION' . 1.3465 1.4078 2834 0.1310 97.00 0.2028 . . 157 . . . . 'X-RAY DIFFRACTION' . 1.4078 1.4820 2826 0.1325 97.00 0.2038 . . 135 . . . . 'X-RAY DIFFRACTION' . 1.4820 1.5748 2895 0.1252 98.00 0.2094 . . 129 . . . . 'X-RAY DIFFRACTION' . 1.5748 1.6964 2831 0.1304 98.00 0.1754 . . 154 . . . . 'X-RAY DIFFRACTION' . 1.6964 1.8671 2906 0.1418 99.00 0.1994 . . 164 . . . . 'X-RAY DIFFRACTION' . 1.8671 2.1371 2904 0.1452 99.00 0.1843 . . 156 . . . . 'X-RAY DIFFRACTION' . 2.1371 2.6919 2919 0.1535 100.00 0.2108 . . 168 . . . . 'X-RAY DIFFRACTION' . 2.6919 24.2624 2913 0.1712 97.00 0.1977 . . 163 . . . . # _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.entry_id 3I2V _pdbx_refine.R_factor_all_no_cutoff ? _pdbx_refine.R_factor_obs_no_cutoff ? _pdbx_refine.free_R_factor_no_cutoff ? _pdbx_refine.free_R_error_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff ? _pdbx_refine.free_R_val_test_set_ct_no_cutoff ? _pdbx_refine.R_factor_all_4sig_cutoff ? _pdbx_refine.R_factor_obs_4sig_cutoff ? _pdbx_refine.free_R_factor_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff ? _pdbx_refine.number_reflns_obs_4sig_cutoff ? # _struct.entry_id 3I2V _struct.title 'Crystal structure of human MOCS3 rhodanese-like domain' _struct.pdbx_descriptor 'Adenylyltransferase and sulfurtransferase MOCS3 (E.C.2.7.7.-, 2.8.1.-)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3I2V _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text ;RHODANESE, SULFURTRANSFERASE, MOCS3, UBA4, Structural Genomics, Ubiquitin biology, Structural Genomics Consortium, SGC, ATP-binding, Cytoplasm, Molybdenum cofactor biosynthesis, Multifunctional enzyme, Nucleotide-binding, Transferase, tRNA processing ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 4 ? GLY A 15 ? SER A 3 GLY A 14 1 ? 12 HELX_P HELX_P2 2 PRO A 25 ? CYS A 32 ? PRO A 24 CYS A 31 1 ? 8 HELX_P HELX_P3 3 PRO A 41 ? ARG A 47 ? PRO A 40 ARG A 46 1 ? 7 HELX_P HELX_P4 4 ASP A 49 ? GLN A 65 ? ASP A 48 GLN A 64 1 ? 17 HELX_P HELX_P5 5 ASN A 83 ? ALA A 98 ? ASN A 82 ALA A 97 1 ? 16 HELX_P HELX_P6 6 GLY A 111 ? ILE A 120 ? GLY A 110 ILE A 119 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A LEU 113 C ? ? ? 1_555 A MSE 114 N ? ? A LEU 112 A MSE 113 1_555 ? ? ? ? ? ? ? 1.323 ? covale2 covale ? ? A MSE 114 C ? ? ? 1_555 A ALA 115 N ? ? A MSE 113 A ALA 114 1_555 ? ? ? ? ? ? ? 1.348 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 2 ? VAL A 3 ? ARG A 1 VAL A 2 A 2 LEU A 104 ? VAL A 109 ? LEU A 103 VAL A 108 A 3 VAL A 73 ? ILE A 78 ? VAL A 72 ILE A 77 A 4 LEU A 19 ? ASP A 22 ? LEU A 18 ASP A 21 A 5 LEU A 38 ? HIS A 39 ? LEU A 37 HIS A 38 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 3 ? N VAL A 2 O ASP A 108 ? O ASP A 107 A 2 3 O THR A 105 ? O THR A 104 N ILE A 75 ? N ILE A 74 A 3 4 O TYR A 76 ? O TYR A 75 N LEU A 21 ? N LEU A 20 A 4 5 N LEU A 20 ? N LEU A 19 O LEU A 38 ? O LEU A 37 # _database_PDB_matrix.entry_id 3I2V _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3I2V _atom_sites.fract_transf_matrix[1][1] 0.027161 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.009972 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.031337 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021036 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 0 0 SER SER A . n A 1 2 ARG 2 1 1 ARG ARG A . n A 1 3 VAL 3 2 2 VAL VAL A . n A 1 4 SER 4 3 3 SER SER A . n A 1 5 VAL 5 4 4 VAL VAL A . n A 1 6 THR 6 5 5 THR THR A . n A 1 7 ASP 7 6 6 ASP ASP A . n A 1 8 TYR 8 7 7 TYR TYR A . n A 1 9 LYS 9 8 8 LYS LYS A . n A 1 10 ARG 10 9 9 ARG ARG A . n A 1 11 LEU 11 10 10 LEU LEU A . n A 1 12 LEU 12 11 11 LEU LEU A . n A 1 13 ASP 13 12 12 ASP ASP A . n A 1 14 SER 14 13 13 SER SER A . n A 1 15 GLY 15 14 14 GLY GLY A . n A 1 16 ALA 16 15 15 ALA ALA A . n A 1 17 PHE 17 16 16 PHE PHE A . n A 1 18 HIS 18 17 17 HIS HIS A . n A 1 19 LEU 19 18 18 LEU LEU A . n A 1 20 LEU 20 19 19 LEU LEU A . n A 1 21 LEU 21 20 20 LEU LEU A . n A 1 22 ASP 22 21 21 ASP ASP A . n A 1 23 VAL 23 22 22 VAL VAL A . n A 1 24 ARG 24 23 23 ARG ARG A . n A 1 25 PRO 25 24 24 PRO PRO A . n A 1 26 GLN 26 25 25 GLN GLN A . n A 1 27 VAL 27 26 26 VAL VAL A . n A 1 28 GLU 28 27 27 GLU GLU A . n A 1 29 VAL 29 28 28 VAL VAL A . n A 1 30 ASP 30 29 29 ASP ASP A . n A 1 31 ILE 31 30 30 ILE ILE A . n A 1 32 CYS 32 31 31 CYS CYS A . n A 1 33 ARG 33 32 32 ARG ARG A . n A 1 34 LEU 34 33 33 LEU LEU A . n A 1 35 PRO 35 34 34 PRO PRO A . n A 1 36 HIS 36 35 35 HIS HIS A . n A 1 37 ALA 37 36 36 ALA ALA A . n A 1 38 LEU 38 37 37 LEU LEU A . n A 1 39 HIS 39 38 38 HIS HIS A . n A 1 40 ILE 40 39 39 ILE ILE A . n A 1 41 PRO 41 40 40 PRO PRO A . n A 1 42 LEU 42 41 41 LEU LEU A . n A 1 43 LYS 43 42 42 LYS LYS A . n A 1 44 HIS 44 43 43 HIS HIS A . n A 1 45 LEU 45 44 44 LEU LEU A . n A 1 46 GLU 46 45 45 GLU GLU A . n A 1 47 ARG 47 46 46 ARG ARG A . n A 1 48 ARG 48 47 47 ARG ARG A . n A 1 49 ASP 49 48 48 ASP ASP A . n A 1 50 ALA 50 49 49 ALA ALA A . n A 1 51 GLU 51 50 50 GLU GLU A . n A 1 52 SER 52 51 51 SER SER A . n A 1 53 LEU 53 52 52 LEU LEU A . n A 1 54 LYS 54 53 53 LYS LYS A . n A 1 55 LEU 55 54 54 LEU LEU A . n A 1 56 LEU 56 55 55 LEU LEU A . n A 1 57 LYS 57 56 56 LYS LYS A . n A 1 58 GLU 58 57 57 GLU GLU A . n A 1 59 ALA 59 58 58 ALA ALA A . n A 1 60 ILE 60 59 59 ILE ILE A . n A 1 61 TRP 61 60 60 TRP TRP A . n A 1 62 GLU 62 61 61 GLU GLU A . n A 1 63 GLU 63 62 62 GLU GLU A . n A 1 64 LYS 64 63 63 LYS LYS A . n A 1 65 GLN 65 64 64 GLN GLN A . n A 1 66 GLY 66 65 65 GLY GLY A . n A 1 67 THR 67 66 66 THR THR A . n A 1 68 GLN 68 67 ? ? ? A . n A 1 69 GLU 69 68 ? ? ? A . n A 1 70 GLY 70 69 ? ? ? A . n A 1 71 ALA 71 70 70 ALA ALA A . n A 1 72 ALA 72 71 71 ALA ALA A . n A 1 73 VAL 73 72 72 VAL VAL A . n A 1 74 PRO 74 73 73 PRO PRO A . n A 1 75 ILE 75 74 74 ILE ILE A . n A 1 76 TYR 76 75 75 TYR TYR A . n A 1 77 VAL 77 76 76 VAL VAL A . n A 1 78 ILE 78 77 77 ILE ILE A . n A 1 79 CYS 79 78 78 CYS CYS A . n A 1 80 LYS 80 79 79 LYS LYS A . n A 1 81 LEU 81 80 80 LEU LEU A . n A 1 82 GLY 82 81 81 GLY GLY A . n A 1 83 ASN 83 82 82 ASN ASN A . n A 1 84 ASP 84 83 83 ASP ASP A . n A 1 85 SER 85 84 84 SER SER A . n A 1 86 GLN 86 85 85 GLN GLN A . n A 1 87 LYS 87 86 86 LYS LYS A . n A 1 88 ALA 88 87 87 ALA ALA A . n A 1 89 VAL 89 88 88 VAL VAL A . n A 1 90 LYS 90 89 89 LYS LYS A . n A 1 91 ILE 91 90 90 ILE ILE A . n A 1 92 LEU 92 91 91 LEU LEU A . n A 1 93 GLN 93 92 92 GLN GLN A . n A 1 94 SER 94 93 93 SER SER A . n A 1 95 LEU 95 94 94 LEU LEU A . n A 1 96 SER 96 95 95 SER SER A . n A 1 97 ALA 97 96 96 ALA ALA A . n A 1 98 ALA 98 97 97 ALA ALA A . n A 1 99 GLN 99 98 98 GLN GLN A . n A 1 100 GLU 100 99 99 GLU GLU A . n A 1 101 LEU 101 100 100 LEU LEU A . n A 1 102 ASP 102 101 101 ASP ASP A . n A 1 103 PRO 103 102 102 PRO PRO A . n A 1 104 LEU 104 103 103 LEU LEU A . n A 1 105 THR 105 104 104 THR THR A . n A 1 106 VAL 106 105 105 VAL VAL A . n A 1 107 ARG 107 106 106 ARG ARG A . n A 1 108 ASP 108 107 107 ASP ASP A . n A 1 109 VAL 109 108 108 VAL VAL A . n A 1 110 VAL 110 109 109 VAL VAL A . n A 1 111 GLY 111 110 110 GLY GLY A . n A 1 112 GLY 112 111 111 GLY GLY A . n A 1 113 LEU 113 112 112 LEU LEU A . n A 1 114 MSE 114 113 113 MSE MSE A . n A 1 115 ALA 115 114 114 ALA ALA A . n A 1 116 TRP 116 115 115 TRP TRP A . n A 1 117 ALA 117 116 116 ALA ALA A . n A 1 118 ALA 118 117 117 ALA ALA A . n A 1 119 LYS 119 118 118 LYS LYS A . n A 1 120 ILE 120 119 119 ILE ILE A . n A 1 121 ASP 121 120 120 ASP ASP A . n A 1 122 GLY 122 121 121 GLY GLY A . n A 1 123 THR 123 122 122 THR THR A . n A 1 124 PHE 124 123 123 PHE PHE A . n A 1 125 PRO 125 124 124 PRO PRO A . n A 1 126 GLN 126 125 125 GLN GLN A . n A 1 127 TYR 127 126 126 TYR TYR A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 127 127 HOH HOH A . B 2 HOH 2 128 128 HOH HOH A . B 2 HOH 3 129 129 HOH HOH A . B 2 HOH 4 130 130 HOH HOH A . B 2 HOH 5 131 131 HOH HOH A . B 2 HOH 6 132 132 HOH HOH A . B 2 HOH 7 133 133 HOH HOH A . B 2 HOH 8 134 134 HOH HOH A . B 2 HOH 9 135 135 HOH HOH A . B 2 HOH 10 136 136 HOH HOH A . B 2 HOH 11 137 137 HOH HOH A . B 2 HOH 12 138 138 HOH HOH A . B 2 HOH 13 139 139 HOH HOH A . B 2 HOH 14 140 140 HOH HOH A . B 2 HOH 15 141 141 HOH HOH A . B 2 HOH 16 142 142 HOH HOH A . B 2 HOH 17 143 143 HOH HOH A . B 2 HOH 18 144 144 HOH HOH A . B 2 HOH 19 145 145 HOH HOH A . B 2 HOH 20 146 146 HOH HOH A . B 2 HOH 21 147 147 HOH HOH A . B 2 HOH 22 148 148 HOH HOH A . B 2 HOH 23 149 149 HOH HOH A . B 2 HOH 24 150 150 HOH HOH A . B 2 HOH 25 151 151 HOH HOH A . B 2 HOH 26 152 152 HOH HOH A . B 2 HOH 27 153 153 HOH HOH A . B 2 HOH 28 154 154 HOH HOH A . B 2 HOH 29 155 155 HOH HOH A . B 2 HOH 30 156 156 HOH HOH A . B 2 HOH 31 157 157 HOH HOH A . B 2 HOH 32 158 158 HOH HOH A . B 2 HOH 33 159 159 HOH HOH A . B 2 HOH 34 160 160 HOH HOH A . B 2 HOH 35 161 161 HOH HOH A . B 2 HOH 36 162 162 HOH HOH A . B 2 HOH 37 163 163 HOH HOH A . B 2 HOH 38 164 164 HOH HOH A . B 2 HOH 39 165 165 HOH HOH A . B 2 HOH 40 166 166 HOH HOH A . B 2 HOH 41 167 167 HOH HOH A . B 2 HOH 42 169 169 HOH HOH A . B 2 HOH 43 170 170 HOH HOH A . B 2 HOH 44 171 171 HOH HOH A . B 2 HOH 45 172 172 HOH HOH A . B 2 HOH 46 173 173 HOH HOH A . B 2 HOH 47 174 174 HOH HOH A . B 2 HOH 48 175 175 HOH HOH A . B 2 HOH 49 176 176 HOH HOH A . B 2 HOH 50 177 177 HOH HOH A . B 2 HOH 51 178 178 HOH HOH A . B 2 HOH 52 179 179 HOH HOH A . B 2 HOH 53 181 181 HOH HOH A . B 2 HOH 54 182 182 HOH HOH A . B 2 HOH 55 183 183 HOH HOH A . B 2 HOH 56 184 184 HOH HOH A . B 2 HOH 57 185 185 HOH HOH A . B 2 HOH 58 186 186 HOH HOH A . B 2 HOH 59 187 187 HOH HOH A . B 2 HOH 60 188 188 HOH HOH A . B 2 HOH 61 189 189 HOH HOH A . B 2 HOH 62 190 190 HOH HOH A . B 2 HOH 63 191 1 HOH HOH A . B 2 HOH 64 192 2 HOH HOH A . B 2 HOH 65 193 3 HOH HOH A . B 2 HOH 66 194 4 HOH HOH A . B 2 HOH 67 195 5 HOH HOH A . B 2 HOH 68 196 6 HOH HOH A . B 2 HOH 69 197 7 HOH HOH A . B 2 HOH 70 198 8 HOH HOH A . B 2 HOH 71 199 9 HOH HOH A . B 2 HOH 72 200 10 HOH HOH A . B 2 HOH 73 201 11 HOH HOH A . B 2 HOH 74 202 12 HOH HOH A . B 2 HOH 75 203 13 HOH HOH A . B 2 HOH 76 204 14 HOH HOH A . B 2 HOH 77 205 15 HOH HOH A . B 2 HOH 78 206 16 HOH HOH A . B 2 HOH 79 207 17 HOH HOH A . B 2 HOH 80 208 18 HOH HOH A . B 2 HOH 81 209 19 HOH HOH A . B 2 HOH 82 210 20 HOH HOH A . B 2 HOH 83 211 21 HOH HOH A . B 2 HOH 84 212 22 HOH HOH A . B 2 HOH 85 213 23 HOH HOH A . B 2 HOH 86 214 24 HOH HOH A . B 2 HOH 87 215 25 HOH HOH A . B 2 HOH 88 216 26 HOH HOH A . B 2 HOH 89 217 27 HOH HOH A . B 2 HOH 90 218 28 HOH HOH A . B 2 HOH 91 219 29 HOH HOH A . B 2 HOH 92 220 30 HOH HOH A . B 2 HOH 93 221 31 HOH HOH A . B 2 HOH 94 222 32 HOH HOH A . B 2 HOH 95 223 33 HOH HOH A . B 2 HOH 96 224 34 HOH HOH A . B 2 HOH 97 225 35 HOH HOH A . B 2 HOH 98 226 36 HOH HOH A . B 2 HOH 99 227 37 HOH HOH A . B 2 HOH 100 228 38 HOH HOH A . B 2 HOH 101 229 39 HOH HOH A . B 2 HOH 102 230 40 HOH HOH A . B 2 HOH 103 231 41 HOH HOH A . B 2 HOH 104 232 42 HOH HOH A . B 2 HOH 105 233 43 HOH HOH A . B 2 HOH 106 234 44 HOH HOH A . B 2 HOH 107 235 45 HOH HOH A . B 2 HOH 108 236 46 HOH HOH A . B 2 HOH 109 237 47 HOH HOH A . B 2 HOH 110 238 48 HOH HOH A . B 2 HOH 111 239 49 HOH HOH A . B 2 HOH 112 240 50 HOH HOH A . B 2 HOH 113 241 51 HOH HOH A . B 2 HOH 114 242 52 HOH HOH A . B 2 HOH 115 243 53 HOH HOH A . B 2 HOH 116 244 54 HOH HOH A . B 2 HOH 117 245 55 HOH HOH A . B 2 HOH 118 246 56 HOH HOH A . B 2 HOH 119 247 57 HOH HOH A . B 2 HOH 120 248 58 HOH HOH A . B 2 HOH 121 249 59 HOH HOH A . B 2 HOH 122 250 60 HOH HOH A . B 2 HOH 123 251 61 HOH HOH A . B 2 HOH 124 252 62 HOH HOH A . B 2 HOH 125 253 63 HOH HOH A . B 2 HOH 126 254 64 HOH HOH A . B 2 HOH 127 255 65 HOH HOH A . B 2 HOH 128 256 66 HOH HOH A . B 2 HOH 129 257 67 HOH HOH A . B 2 HOH 130 258 68 HOH HOH A . B 2 HOH 131 260 70 HOH HOH A . B 2 HOH 132 261 71 HOH HOH A . B 2 HOH 133 262 72 HOH HOH A . B 2 HOH 134 263 73 HOH HOH A . B 2 HOH 135 264 74 HOH HOH A . B 2 HOH 136 265 75 HOH HOH A . B 2 HOH 137 266 76 HOH HOH A . B 2 HOH 138 267 77 HOH HOH A . B 2 HOH 139 268 78 HOH HOH A . B 2 HOH 140 269 79 HOH HOH A . B 2 HOH 141 270 80 HOH HOH A . B 2 HOH 142 271 81 HOH HOH A . B 2 HOH 143 272 82 HOH HOH A . B 2 HOH 144 273 83 HOH HOH A . B 2 HOH 145 274 84 HOH HOH A . B 2 HOH 146 275 85 HOH HOH A . B 2 HOH 147 276 86 HOH HOH A . B 2 HOH 148 277 87 HOH HOH A . B 2 HOH 149 278 88 HOH HOH A . B 2 HOH 150 279 89 HOH HOH A . B 2 HOH 151 280 90 HOH HOH A . B 2 HOH 152 281 91 HOH HOH A . B 2 HOH 153 282 92 HOH HOH A . B 2 HOH 154 283 93 HOH HOH A . B 2 HOH 155 285 95 HOH HOH A . B 2 HOH 156 286 96 HOH HOH A . B 2 HOH 157 287 97 HOH HOH A . B 2 HOH 158 288 98 HOH HOH A . B 2 HOH 159 289 99 HOH HOH A . B 2 HOH 160 290 100 HOH HOH A . B 2 HOH 161 291 101 HOH HOH A . B 2 HOH 162 292 102 HOH HOH A . B 2 HOH 163 293 103 HOH HOH A . B 2 HOH 164 294 104 HOH HOH A . B 2 HOH 165 295 105 HOH HOH A . B 2 HOH 166 296 106 HOH HOH A . B 2 HOH 167 297 107 HOH HOH A . B 2 HOH 168 298 108 HOH HOH A . B 2 HOH 169 299 109 HOH HOH A . B 2 HOH 170 300 110 HOH HOH A . B 2 HOH 171 301 111 HOH HOH A . B 2 HOH 172 302 112 HOH HOH A . B 2 HOH 173 303 113 HOH HOH A . B 2 HOH 174 304 114 HOH HOH A . B 2 HOH 175 305 115 HOH HOH A . B 2 HOH 176 306 116 HOH HOH A . B 2 HOH 177 307 117 HOH HOH A . B 2 HOH 178 308 118 HOH HOH A . B 2 HOH 179 309 119 HOH HOH A . B 2 HOH 180 310 120 HOH HOH A . B 2 HOH 181 311 121 HOH HOH A . B 2 HOH 182 312 122 HOH HOH A . B 2 HOH 183 313 123 HOH HOH A . B 2 HOH 184 314 124 HOH HOH A . B 2 HOH 185 315 125 HOH HOH A . B 2 HOH 186 316 126 HOH HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id MSE _pdbx_struct_mod_residue.label_seq_id 114 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id MSE _pdbx_struct_mod_residue.auth_seq_id 113 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id MET _pdbx_struct_mod_residue.details SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-07-21 2 'Structure model' 1 1 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 PHENIX 'model building' . ? 2 PHENIX refinement '(phenix.refine)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 PHENIX phasing . ? 6 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 42 ? CG ? A LYS 43 CG 2 1 Y 1 A LYS 42 ? CD ? A LYS 43 CD 3 1 Y 1 A LYS 42 ? CE ? A LYS 43 CE 4 1 Y 1 A LYS 42 ? NZ ? A LYS 43 NZ 5 1 Y 1 A ARG 46 ? CG ? A ARG 47 CG 6 1 Y 1 A ARG 46 ? CD ? A ARG 47 CD 7 1 Y 1 A ARG 46 ? NE ? A ARG 47 NE 8 1 Y 1 A ARG 46 ? CZ ? A ARG 47 CZ 9 1 Y 1 A ARG 46 ? NH1 ? A ARG 47 NH1 10 1 Y 1 A ARG 46 ? NH2 ? A ARG 47 NH2 11 1 Y 1 A LYS 89 ? CG ? A LYS 90 CG 12 1 Y 1 A LYS 89 ? CD ? A LYS 90 CD 13 1 Y 1 A LYS 89 ? CE ? A LYS 90 CE 14 1 Y 1 A LYS 89 ? NZ ? A LYS 90 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLN 67 ? A GLN 68 2 1 Y 1 A GLU 68 ? A GLU 69 3 1 Y 1 A GLY 69 ? A GLY 70 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #