HEADER LIGASE 08-JUL-09 3I7F TITLE ASPARTYL TRNA SYNTHETASE FROM ENTAMOEBA HISTOLYTICA COMPND MOL_ID: 1; COMPND 2 MOLECULE: ASPARTYL-TRNA SYNTHETASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 6.1.1.12; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTAMOEBA HISTOLYTICA; SOURCE 3 ORGANISM_TAXID: 5759; SOURCE 4 GENE: EHI_175050; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: AVA0421 KEYWDS TRNA LIGASE, APO, ATP-BINDING, AMINOACYL-TRNA SYNTHETASE, LIGASE, KEYWDS 2 NUCLEOTIDE-BINDING, PROTEIN BIOSYNTHESIS, STRUCTURAL GENOMICS, KEYWDS 3 MEDICAL STRUCTURAL GENOMICS OF PATHOGENIC PROTOZOA, MSGPP EXPDTA X-RAY DIFFRACTION AUTHOR T.ARAKAKI,E.A.MERRITT,MEDICAL STRUCTURAL GENOMICS OF PATHOGENIC AUTHOR 2 PROTOZOA (MSGPP) REVDAT 5 21-FEB-24 3I7F 1 SEQADV REVDAT 4 01-NOV-17 3I7F 1 REMARK REVDAT 3 13-JUL-11 3I7F 1 VERSN REVDAT 2 22-DEC-09 3I7F 1 JRNL REVDAT 1 21-JUL-09 3I7F 0 JRNL AUTH E.A.MERRITT,T.L.ARAKAKI,E.T.LARSON,A.KELLEY,N.MUELLER, JRNL AUTH 2 A.J.NAPULI,L.ZHANG,G.DEDITTA,J.LUFT,C.L.VERLINDE,E.FAN, JRNL AUTH 3 F.ZUCKER,F.S.BUCKNER,W.C.VAN VOORHIS,W.G.HOL JRNL TITL CRYSTAL STRUCTURE OF THE ASPARTYL-TRNA SYNTHETASE FROM JRNL TITL 2 ENTAMOEBA HISTOLYTICA. JRNL REF MOL.BIOCHEM.PARASITOL. V. 169 95 2010 JRNL REFN ISSN 0166-6851 JRNL PMID 19874856 JRNL DOI 10.1016/J.MOLBIOPARA.2009.10.005 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 31597 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1641 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.87 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2051 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.82 REMARK 3 BIN R VALUE (WORKING SET) : 0.3510 REMARK 3 BIN FREE R VALUE SET COUNT : 119 REMARK 3 BIN FREE R VALUE : 0.4220 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7659 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 78 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -11.47000 REMARK 3 B22 (A**2) : -11.47000 REMARK 3 B33 (A**2) : 22.94000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.073 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.413 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 51.924 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.929 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.913 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7827 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 5360 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10612 ; 1.378 ; 1.975 REMARK 3 BOND ANGLES OTHERS (DEGREES): 13073 ; 0.903 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 962 ; 6.494 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 349 ;32.953 ;23.868 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1345 ;18.422 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 50 ;16.055 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1204 ; 0.076 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8618 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1594 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4852 ; 0.351 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1918 ; 0.088 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 7885 ; 0.696 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2975 ; 1.256 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2727 ; 2.091 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 6 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 27 A 165 2 REMARK 3 1 B 27 B 165 2 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 822 ; 0.030 ; 0.050 REMARK 3 MEDIUM POSITIONAL 1 A (A): 959 ; 0.030 ; 0.500 REMARK 3 TIGHT THERMAL 1 A (A**2): 822 ; 0.060 ; 0.500 REMARK 3 MEDIUM THERMAL 1 A (A**2): 959 ; 0.080 ; 2.000 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 220 A 397 2 REMARK 3 1 B 220 B 397 2 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 2 A (A): 937 ; 0.030 ; 0.050 REMARK 3 MEDIUM POSITIONAL 2 A (A): 1318 ; 0.030 ; 0.500 REMARK 3 TIGHT THERMAL 2 A (A**2): 937 ; 0.080 ; 0.500 REMARK 3 MEDIUM THERMAL 2 A (A**2): 1318 ; 0.080 ; 2.000 REMARK 3 REMARK 3 NCS GROUP NUMBER : 3 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 417 A 541 2 REMARK 3 1 B 417 B 541 2 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 3 A (A): 731 ; 0.030 ; 0.050 REMARK 3 MEDIUM POSITIONAL 3 A (A): 969 ; 0.030 ; 0.500 REMARK 3 TIGHT THERMAL 3 A (A**2): 731 ; 0.070 ; 0.500 REMARK 3 MEDIUM THERMAL 3 A (A**2): 969 ; 0.090 ; 2.000 REMARK 3 REMARK 3 NCS GROUP NUMBER : 4 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 398 A 416 3 REMARK 3 1 B 398 B 416 3 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 4 A (A): 111 ; 0.030 ; 0.050 REMARK 3 LOOSE POSITIONAL 4 A (A): 119 ; 0.030 ; 5.000 REMARK 3 TIGHT THERMAL 4 A (A**2): 111 ; 0.070 ; 0.500 REMARK 3 LOOSE THERMAL 4 A (A**2): 119 ; 0.100 ;10.000 REMARK 3 REMARK 3 NCS GROUP NUMBER : 5 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 10 A 26 3 REMARK 3 1 B 10 B 26 3 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 5 A (A): 97 ; 0.030 ; 0.050 REMARK 3 LOOSE POSITIONAL 5 A (A): 87 ; 0.040 ; 5.000 REMARK 3 TIGHT THERMAL 5 A (A**2): 97 ; 0.050 ; 0.500 REMARK 3 LOOSE THERMAL 5 A (A**2): 87 ; 0.070 ;10.000 REMARK 3 REMARK 3 NCS GROUP NUMBER : 6 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 166 A 176 3 REMARK 3 1 B 166 B 176 3 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 6 A (A): 66 ; 0.020 ; 0.050 REMARK 3 LOOSE POSITIONAL 6 A (A): 48 ; 0.030 ; 5.000 REMARK 3 TIGHT THERMAL 6 A (A**2): 66 ; 0.030 ; 0.500 REMARK 3 LOOSE THERMAL 6 A (A**2): 48 ; 0.030 ;10.000 REMARK 3 REMARK 3 TWIN DETAILS REMARK 3 NUMBER OF TWIN DOMAINS : 2 REMARK 3 TWIN DOMAIN : 1 REMARK 3 TWIN OPERATOR : H, K, L REMARK 3 TWIN FRACTION : 0.851 REMARK 3 TWIN DOMAIN : 2 REMARK 3 TWIN OPERATOR : K, H, -L REMARK 3 TWIN FRACTION : 0.149 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 10 A 170 REMARK 3 ORIGIN FOR THE GROUP (A): 10.7660 -36.0730 -27.8500 REMARK 3 T TENSOR REMARK 3 T11: 0.2899 T22: 0.2395 REMARK 3 T33: 0.1756 T12: 0.0847 REMARK 3 T13: -0.0428 T23: -0.0568 REMARK 3 L TENSOR REMARK 3 L11: 2.7316 L22: 2.9389 REMARK 3 L33: 2.0466 L12: 0.1213 REMARK 3 L13: -0.3451 L23: 0.6570 REMARK 3 S TENSOR REMARK 3 S11: 0.0436 S12: 0.4195 S13: -0.3510 REMARK 3 S21: -0.4380 S22: -0.0365 S23: -0.1684 REMARK 3 S31: 0.2058 S32: 0.2467 S33: -0.0071 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 171 A 225 REMARK 3 ORIGIN FOR THE GROUP (A): 4.3440 -62.0140 -22.7480 REMARK 3 T TENSOR REMARK 3 T11: 1.7836 T22: 0.9714 REMARK 3 T33: 1.0755 T12: 0.0024 REMARK 3 T13: 0.2850 T23: 0.0673 REMARK 3 L TENSOR REMARK 3 L11: 6.5283 L22: 31.4614 REMARK 3 L33: 2.2884 L12: -16.2818 REMARK 3 L13: -6.8559 L23: 11.4980 REMARK 3 S TENSOR REMARK 3 S11: -0.3540 S12: -0.4704 S13: -1.7724 REMARK 3 S21: 1.0451 S22: -0.3278 S23: 2.2110 REMARK 3 S31: 0.5917 S32: 0.3335 S33: 0.6818 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 226 A 268 REMARK 3 ORIGIN FOR THE GROUP (A): -19.6980 -40.9960 -22.2510 REMARK 3 T TENSOR REMARK 3 T11: 0.4110 T22: 0.2092 REMARK 3 T33: 0.3878 T12: -0.1305 REMARK 3 T13: -0.0460 T23: -0.0995 REMARK 3 L TENSOR REMARK 3 L11: 4.6826 L22: 0.7163 REMARK 3 L33: 0.0971 L12: -0.2890 REMARK 3 L13: 0.1700 L23: -0.3819 REMARK 3 S TENSOR REMARK 3 S11: -0.0264 S12: -0.0316 S13: -0.6820 REMARK 3 S21: 0.0191 S22: 0.0537 S23: 0.2947 REMARK 3 S31: 0.2170 S32: -0.1279 S33: -0.0274 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 289 A 335 REMARK 3 ORIGIN FOR THE GROUP (A): -29.7220 -47.0320 -15.6750 REMARK 3 T TENSOR REMARK 3 T11: 0.5763 T22: 0.3203 REMARK 3 T33: 0.8056 T12: -0.1121 REMARK 3 T13: -0.1886 T23: 0.1169 REMARK 3 L TENSOR REMARK 3 L11: 12.4026 L22: 3.4752 REMARK 3 L33: 3.7710 L12: -3.8434 REMARK 3 L13: 1.3509 L23: -0.0741 REMARK 3 S TENSOR REMARK 3 S11: 0.3418 S12: -0.6906 S13: -1.9101 REMARK 3 S21: 0.1684 S22: 0.0513 S23: 0.4895 REMARK 3 S31: 1.1491 S32: 0.3298 S33: -0.3930 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 336 A 544 REMARK 3 ORIGIN FOR THE GROUP (A): -31.7460 -54.6980 -24.7640 REMARK 3 T TENSOR REMARK 3 T11: 0.6149 T22: 0.2992 REMARK 3 T33: 1.1561 T12: -0.1470 REMARK 3 T13: -0.3262 T23: -0.0759 REMARK 3 L TENSOR REMARK 3 L11: 5.3592 L22: 0.4674 REMARK 3 L33: 0.8887 L12: 0.0054 REMARK 3 L13: -1.5088 L23: 0.0238 REMARK 3 S TENSOR REMARK 3 S11: 0.0622 S12: 0.0439 S13: -1.4816 REMARK 3 S21: -0.0992 S22: 0.0745 S23: 0.2333 REMARK 3 S31: 0.4459 S32: -0.0508 S33: -0.1367 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 10 B 167 REMARK 3 ORIGIN FOR THE GROUP (A): -59.5440 -32.5050 -22.0570 REMARK 3 T TENSOR REMARK 3 T11: 0.2751 T22: 0.5694 REMARK 3 T33: 0.6535 T12: -0.0916 REMARK 3 T13: -0.1079 T23: 0.1677 REMARK 3 L TENSOR REMARK 3 L11: 5.1476 L22: 4.1880 REMARK 3 L33: 2.7510 L12: 1.5862 REMARK 3 L13: 0.6848 L23: 0.8073 REMARK 3 S TENSOR REMARK 3 S11: 0.1229 S12: 0.3229 S13: 0.2432 REMARK 3 S21: -0.2711 S22: -0.0405 S23: 0.6024 REMARK 3 S31: -0.0471 S32: -0.6336 S33: -0.0824 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 168 B 224 REMARK 3 ORIGIN FOR THE GROUP (A): -53.1280 -16.8130 -1.4330 REMARK 3 T TENSOR REMARK 3 T11: 0.9911 T22: 1.5852 REMARK 3 T33: 1.1318 T12: -0.3700 REMARK 3 T13: 0.3127 T23: 0.3168 REMARK 3 L TENSOR REMARK 3 L11: -3.3377 L22: 5.2547 REMARK 3 L33: 3.0828 L12: 2.8612 REMARK 3 L13: -1.1714 L23: 7.6817 REMARK 3 S TENSOR REMARK 3 S11: 0.7863 S12: -0.8251 S13: 0.3682 REMARK 3 S21: 0.9384 S22: -0.8656 S23: -0.6268 REMARK 3 S31: 0.2370 S32: -0.1701 S33: 0.0793 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 225 B 268 REMARK 3 ORIGIN FOR THE GROUP (A): -29.0070 -32.1030 -17.3320 REMARK 3 T TENSOR REMARK 3 T11: 0.3134 T22: 0.1396 REMARK 3 T33: 0.3249 T12: -0.1132 REMARK 3 T13: -0.0897 T23: 0.0698 REMARK 3 L TENSOR REMARK 3 L11: 7.0729 L22: 0.5469 REMARK 3 L33: 0.2797 L12: -0.6802 REMARK 3 L13: 0.2836 L23: 0.6482 REMARK 3 S TENSOR REMARK 3 S11: 0.1477 S12: -0.2199 S13: -0.6922 REMARK 3 S21: 0.2277 S22: -0.0464 S23: 0.1101 REMARK 3 S31: 0.2441 S32: -0.1585 S33: -0.1013 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 289 B 338 REMARK 3 ORIGIN FOR THE GROUP (A): -16.5250 -32.5790 -10.8430 REMARK 3 T TENSOR REMARK 3 T11: 0.5023 T22: 0.3271 REMARK 3 T33: 0.2922 T12: -0.0122 REMARK 3 T13: 0.0295 T23: -0.0779 REMARK 3 L TENSOR REMARK 3 L11: 18.4100 L22: 8.4524 REMARK 3 L33: 1.9457 L12: -0.1424 REMARK 3 L13: -2.5389 L23: -3.6079 REMARK 3 S TENSOR REMARK 3 S11: 0.0577 S12: -2.0484 S13: 0.1709 REMARK 3 S21: 1.2528 S22: 0.3273 S23: 1.0151 REMARK 3 S31: -0.1315 S32: 0.2981 S33: -0.3850 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 339 B 544 REMARK 3 ORIGIN FOR THE GROUP (A): -16.2370 -20.4270 -10.0720 REMARK 3 T TENSOR REMARK 3 T11: 0.2199 T22: 0.1499 REMARK 3 T33: 0.1580 T12: -0.0725 REMARK 3 T13: -0.0013 T23: 0.0469 REMARK 3 L TENSOR REMARK 3 L11: 1.3943 L22: 0.8328 REMARK 3 L33: 1.0427 L12: -0.5765 REMARK 3 L13: 0.0532 L23: 0.0755 REMARK 3 S TENSOR REMARK 3 S11: 0.0186 S12: -0.2341 S13: -0.2415 REMARK 3 S21: 0.1142 S22: 0.0778 S23: 0.2520 REMARK 3 S31: 0.1493 S32: -0.1537 S33: -0.0964 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2. U VALUES: RESIDUAL ONLY. REMARK 4 REMARK 4 3I7F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-JUL-09. REMARK 100 THE DEPOSITION ID IS D_1000054058. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-MAY-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.97945 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31605 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.6 REMARK 200 DATA REDUNDANCY IN SHELL : 4.80 REMARK 200 R MERGE FOR SHELL (I) : 0.73500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BALBES REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M LITHIUM SULFATE, 0.1 M BIS-TRIS REMARK 280 PH 5.5, 23% PEG 3350, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 123.92400 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 71.54755 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 18.76500 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 123.92400 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 71.54755 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 18.76500 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 123.92400 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 71.54755 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 18.76500 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 143.09511 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 37.53000 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 143.09511 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 37.53000 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 143.09511 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 37.53000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9270 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 40840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -47.6 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 PRO A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ALA A 3 REMARK 465 THR A 4 REMARK 465 GLN A 5 REMARK 465 GLU A 6 REMARK 465 LYS A 7 REMARK 465 LYS A 8 REMARK 465 PRO A 9 REMARK 465 ASP A 178 REMARK 465 GLU A 179 REMARK 465 LYS A 180 REMARK 465 ILE A 181 REMARK 465 ALA A 182 REMARK 465 LYS A 183 REMARK 465 PHE A 184 REMARK 465 LEU A 185 REMARK 465 LYS A 186 REMARK 465 ASP A 187 REMARK 465 ASN A 188 REMARK 465 GLU A 189 REMARK 465 GLY A 190 REMARK 465 LYS A 191 REMARK 465 ASP A 192 REMARK 465 LEU A 193 REMARK 465 THR A 194 REMARK 465 LYS A 195 REMARK 465 ARG A 196 REMARK 465 PRO A 197 REMARK 465 LEU A 198 REMARK 465 LYS A 199 REMARK 465 ASP A 200 REMARK 465 GLU A 201 REMARK 465 TYR A 202 REMARK 465 ALA A 203 REMARK 465 LYS A 204 REMARK 465 LEU A 205 REMARK 465 LEU A 206 REMARK 465 LYS A 207 REMARK 465 GLU A 208 REMARK 465 GLY A 269 REMARK 465 CYS A 270 REMARK 465 SER A 271 REMARK 465 SER A 272 REMARK 465 GLU A 273 REMARK 465 GLY A 274 REMARK 465 GLY A 275 REMARK 465 SER A 276 REMARK 465 ASN A 277 REMARK 465 ILE A 278 REMARK 465 PHE A 279 REMARK 465 GLU A 280 REMARK 465 VAL A 281 REMARK 465 LYS A 282 REMARK 465 TYR A 283 REMARK 465 PHE A 284 REMARK 465 ASP A 285 REMARK 465 ARG A 286 REMARK 465 LYS A 287 REMARK 465 GLY B -3 REMARK 465 PRO B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 ALA B 3 REMARK 465 THR B 4 REMARK 465 GLN B 5 REMARK 465 GLU B 6 REMARK 465 LYS B 7 REMARK 465 LYS B 8 REMARK 465 PRO B 9 REMARK 465 VAL B 177 REMARK 465 ASP B 178 REMARK 465 GLU B 179 REMARK 465 LYS B 180 REMARK 465 ILE B 181 REMARK 465 ALA B 182 REMARK 465 LYS B 183 REMARK 465 PHE B 184 REMARK 465 LEU B 185 REMARK 465 LYS B 186 REMARK 465 ASP B 187 REMARK 465 ASN B 188 REMARK 465 GLU B 189 REMARK 465 GLY B 190 REMARK 465 LYS B 191 REMARK 465 ASP B 192 REMARK 465 LEU B 193 REMARK 465 THR B 194 REMARK 465 LYS B 195 REMARK 465 ARG B 196 REMARK 465 PRO B 197 REMARK 465 LEU B 198 REMARK 465 LYS B 199 REMARK 465 ASP B 200 REMARK 465 GLU B 201 REMARK 465 TYR B 202 REMARK 465 ALA B 203 REMARK 465 LYS B 204 REMARK 465 LEU B 205 REMARK 465 LEU B 206 REMARK 465 LYS B 207 REMARK 465 GLU B 208 REMARK 465 GLY B 269 REMARK 465 CYS B 270 REMARK 465 SER B 271 REMARK 465 SER B 272 REMARK 465 GLU B 273 REMARK 465 GLY B 274 REMARK 465 GLY B 275 REMARK 465 SER B 276 REMARK 465 ASN B 277 REMARK 465 ILE B 278 REMARK 465 PHE B 279 REMARK 465 GLU B 280 REMARK 465 VAL B 281 REMARK 465 LYS B 282 REMARK 465 TYR B 283 REMARK 465 PHE B 284 REMARK 465 ASP B 285 REMARK 465 ARG B 286 REMARK 465 LYS B 287 REMARK 465 ALA B 288 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 41 CG CD CE NZ REMARK 470 LYS A 168 CG CD CE NZ REMARK 470 LYS A 169 CG CD CE NZ REMARK 470 GLN A 170 CG CD OE1 NE2 REMARK 470 ILE A 174 CG1 CG2 CD1 REMARK 470 LYS A 176 CG CD CE NZ REMARK 470 VAL A 177 CG1 CG2 REMARK 470 LYS A 209 CG CD CE NZ REMARK 470 SER A 211 OG REMARK 470 GLN A 213 CG CD OE1 NE2 REMARK 470 LYS A 214 CG CD CE NZ REMARK 470 LYS A 298 CG CD CE NZ REMARK 470 ILE A 347 CG1 CG2 CD1 REMARK 470 LYS A 370 CE NZ REMARK 470 SER A 401 OG REMARK 470 GLU A 403 OE1 OE2 REMARK 470 THR A 412 OG1 CG2 REMARK 470 GLN A 415 CG CD OE1 NE2 REMARK 470 LYS A 418 CE NZ REMARK 470 GLU A 421 CG CD OE1 OE2 REMARK 470 GLU A 479 CG CD OE1 OE2 REMARK 470 LYS A 483 CG CD CE NZ REMARK 470 GLU A 487 CG CD OE1 OE2 REMARK 470 LYS A 488 CE NZ REMARK 470 ARG A 541 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 10 CG CD OE1 NE2 REMARK 470 LYS B 18 CG CD CE NZ REMARK 470 GLU B 21 CG CD OE1 OE2 REMARK 470 GLU B 26 OE1 OE2 REMARK 470 LYS B 29 CG CD CE NZ REMARK 470 LYS B 41 CG CD CE NZ REMARK 470 LYS B 73 CE NZ REMARK 470 ASN B 75 CG OD1 ND2 REMARK 470 GLN B 107 CG CD OE1 NE2 REMARK 470 LYS B 108 CD CE NZ REMARK 470 LYS B 126 CE NZ REMARK 470 LYS B 130 CD CE NZ REMARK 470 LYS B 168 CG CD CE NZ REMARK 470 LYS B 169 CG CD CE NZ REMARK 470 GLN B 170 CG CD OE1 NE2 REMARK 470 LYS B 176 CG CD CE NZ REMARK 470 LYS B 209 CG CD CE NZ REMARK 470 GLN B 213 CG CD OE1 NE2 REMARK 470 LYS B 214 CG CD CE NZ REMARK 470 LYS B 217 CD CE NZ REMARK 470 ARG B 251 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 324 NE CZ NH1 NH2 REMARK 470 LYS B 370 CG CD CE NZ REMARK 470 SER B 401 OG REMARK 470 THR B 412 OG1 CG2 REMARK 470 GLU B 479 CG CD OE1 OE2 REMARK 470 LYS B 483 CG CD CE NZ REMARK 470 ARG B 541 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ARG A 541 O HOH A 572 1.99 REMARK 500 N ASP A 538 O HOH A 572 2.03 REMARK 500 O ARG A 325 O HOH A 563 2.09 REMARK 500 OD2 ASP A 159 O HOH A 556 2.09 REMARK 500 OE1 GLU B 336 NH1 ARG B 474 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 512 CB CYS A 512 SG -0.130 REMARK 500 CYS B 512 CB CYS B 512 SG -0.158 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 71 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG B 71 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 58 -1.69 70.84 REMARK 500 LYS A 83 107.76 -165.43 REMARK 500 ILE A 174 49.38 -84.31 REMARK 500 LYS A 176 105.84 -36.89 REMARK 500 GLN A 213 -36.16 -175.31 REMARK 500 LYS A 214 177.67 72.97 REMARK 500 GLN A 220 -8.70 -45.92 REMARK 500 PRO A 294 17.01 -68.39 REMARK 500 ARG A 307 -54.68 76.87 REMARK 500 ASN A 320 96.96 -65.74 REMARK 500 THR A 323 -84.53 -105.23 REMARK 500 ARG A 324 17.98 -158.61 REMARK 500 ARG A 325 11.84 -156.35 REMARK 500 VAL A 340 -80.25 -93.35 REMARK 500 ILE A 405 -33.76 -135.51 REMARK 500 PHE A 504 56.06 -111.04 REMARK 500 GLU B 58 -1.32 71.80 REMARK 500 LYS B 73 21.92 -140.94 REMARK 500 LYS B 83 106.43 -168.22 REMARK 500 SER B 95 -168.33 -164.77 REMARK 500 LYS B 214 -130.47 61.27 REMARK 500 TYR B 215 -93.13 -144.20 REMARK 500 VAL B 216 163.90 97.82 REMARK 500 GLN B 220 -4.98 -43.83 REMARK 500 PRO B 294 18.42 -67.95 REMARK 500 ARG B 307 -52.94 75.41 REMARK 500 ASN B 320 96.50 -66.68 REMARK 500 THR B 323 -85.10 -105.36 REMARK 500 ARG B 324 18.76 -158.22 REMARK 500 ARG B 325 13.25 -156.65 REMARK 500 VAL B 340 -80.40 -93.12 REMARK 500 ILE B 405 -33.27 -136.84 REMARK 500 PHE B 504 53.48 -117.28 REMARK 500 REMARK 500 REMARK: NULL DBREF 3I7F A 1 544 PDB 3I7F 3I7F 1 544 DBREF 3I7F B 1 544 PDB 3I7F 3I7F 1 544 SEQADV 3I7F GLY A -3 PDB 3I7F EXPRESSION TAG SEQADV 3I7F PRO A -2 PDB 3I7F EXPRESSION TAG SEQADV 3I7F GLY A -1 PDB 3I7F EXPRESSION TAG SEQADV 3I7F SER A 0 PDB 3I7F EXPRESSION TAG SEQADV 3I7F GLY B -3 PDB 3I7F EXPRESSION TAG SEQADV 3I7F PRO B -2 PDB 3I7F EXPRESSION TAG SEQADV 3I7F GLY B -1 PDB 3I7F EXPRESSION TAG SEQADV 3I7F SER B 0 PDB 3I7F EXPRESSION TAG SEQRES 1 A 548 GLY PRO GLY SER MET ALA ALA THR GLN GLU LYS LYS PRO SEQRES 2 A 548 GLN LEU PRO PRO VAL VAL LEU LEU LYS THR PRO GLU LEU SEQRES 3 A 548 VAL SER GLY GLU ASN PHE LYS VAL MET PRO MET HIS GLN SEQRES 4 A 548 SER GLN PRO CYS TYR LYS THR GLY LEU LYS TYR THR GLU SEQRES 5 A 548 ILE GLU GLU LEU VAL PRO ALA MET ALA GLU LYS THR VAL SEQRES 6 A 548 THR ILE ARG ALA ARG VAL GLN ALA VAL ARG GLY LYS GLY SEQRES 7 A 548 ASN MET VAL PHE LEU PHE LEU ARG LYS GLY ILE TYR THR SEQRES 8 A 548 CYS GLN ALA LEU VAL MET LYS SER GLU THR ILE SER LYS SEQRES 9 A 548 GLU PHE VAL GLN PHE CYS GLN LYS ILE SER ALA GLU SER SEQRES 10 A 548 ILE CYS ASP ILE THR GLY ILE VAL LYS ALA VAL GLU LYS SEQRES 11 A 548 PRO ILE GLU LYS ALA THR GLN GLN ASP VAL GLU ILE HIS SEQRES 12 A 548 VAL THR SER ILE ALA VAL VAL SER LEU ALA GLU TYR PRO SEQRES 13 A 548 LEU PRO MET GLN ILE GLU ASP LEU THR PHE PRO SER SER SEQRES 14 A 548 VAL PHE LYS LYS GLN GLU GLU ASP ILE ALA LYS VAL ASP SEQRES 15 A 548 GLU LYS ILE ALA LYS PHE LEU LYS ASP ASN GLU GLY LYS SEQRES 16 A 548 ASP LEU THR LYS ARG PRO LEU LYS ASP GLU TYR ALA LYS SEQRES 17 A 548 LEU LEU LYS GLU LYS ALA SER ALA GLN LYS TYR VAL LYS SEQRES 18 A 548 VAL SER GLN ASP THR ARG LEU ASP ASN ARG MET LEU ASP SEQRES 19 A 548 LEU ARG THR VAL THR ASN ILE ALA ILE PHE ARG ILE GLN SEQRES 20 A 548 SER ALA CYS CYS GLY LEU PHE ARG GLU PHE LEU THR SER SEQRES 21 A 548 GLN LYS PHE VAL GLU ILE HIS THR PRO LYS LEU ILE GLY SEQRES 22 A 548 CYS SER SER GLU GLY GLY SER ASN ILE PHE GLU VAL LYS SEQRES 23 A 548 TYR PHE ASP ARG LYS ALA TYR LEU ALA GLN SER PRO GLN SEQRES 24 A 548 LEU TYR LYS GLN MET ALA ILE MET GLY ASP PHE ARG LYS SEQRES 25 A 548 VAL PHE GLU VAL GLY PRO VAL PHE ARG ALA GLU ASN SER SEQRES 26 A 548 ASN THR ARG ARG HIS LEU THR GLU PHE GLU GLY LEU ASP SEQRES 27 A 548 ILE GLU MET GLU ILE VAL GLU ASN TYR HIS GLU CYS ILE SEQRES 28 A 548 ASP VAL MET GLU LYS LEU PHE THR PHE ILE PHE ASP GLU SEQRES 29 A 548 ILE PRO LYS ARG PHE PRO ASP GLU LEU LYS VAL ILE ARG SEQRES 30 A 548 LYS GLN TYR PRO PHE GLU ASP LEU ILE TYR ARG PRO PHE SEQRES 31 A 548 LEU ARG LEU THR TYR LYS GLU ALA ILE GLU MET LEU ARG SEQRES 32 A 548 ALA SER GLY GLU THR ILE GLY ASP TYR ASP ASP PHE THR SEQRES 33 A 548 THR PRO GLN GLU VAL LYS LEU GLY GLU LEU ILE LYS ALA SEQRES 34 A 548 LYS TYR ASN THR ASP PHE TYR ILE LEU ASP LYS PHE PRO SEQRES 35 A 548 ALA ALA ILE ARG PRO PHE TYR THR MET PRO ASP ILE ASP SEQRES 36 A 548 ASP PRO ASN TYR SER ASN SER TYR ASP VAL PHE VAL ARG SEQRES 37 A 548 GLY GLN GLU ILE THR SER GLY ALA GLN ARG ILE HIS ASP SEQRES 38 A 548 PRO GLU PHE LEU MET LYS ARG CYS ILE GLU LYS GLY VAL SEQRES 39 A 548 ASP PRO ALA THR LEU LYS ASP TYR ILE GLU SER PHE ARG SEQRES 40 A 548 PHE GLY SER TRP PRO HIS ALA GLY CYS GLY ILE GLY LEU SEQRES 41 A 548 GLU ARG ILE THR MET LEU TYR LEU GLY ILE PRO ASN ILE SEQRES 42 A 548 ARG LYS VAL THR LEU PHE PRO ARG ASP PRO ILE ARG LEU SEQRES 43 A 548 ASN PRO SEQRES 1 B 548 GLY PRO GLY SER MET ALA ALA THR GLN GLU LYS LYS PRO SEQRES 2 B 548 GLN LEU PRO PRO VAL VAL LEU LEU LYS THR PRO GLU LEU SEQRES 3 B 548 VAL SER GLY GLU ASN PHE LYS VAL MET PRO MET HIS GLN SEQRES 4 B 548 SER GLN PRO CYS TYR LYS THR GLY LEU LYS TYR THR GLU SEQRES 5 B 548 ILE GLU GLU LEU VAL PRO ALA MET ALA GLU LYS THR VAL SEQRES 6 B 548 THR ILE ARG ALA ARG VAL GLN ALA VAL ARG GLY LYS GLY SEQRES 7 B 548 ASN MET VAL PHE LEU PHE LEU ARG LYS GLY ILE TYR THR SEQRES 8 B 548 CYS GLN ALA LEU VAL MET LYS SER GLU THR ILE SER LYS SEQRES 9 B 548 GLU PHE VAL GLN PHE CYS GLN LYS ILE SER ALA GLU SER SEQRES 10 B 548 ILE CYS ASP ILE THR GLY ILE VAL LYS ALA VAL GLU LYS SEQRES 11 B 548 PRO ILE GLU LYS ALA THR GLN GLN ASP VAL GLU ILE HIS SEQRES 12 B 548 VAL THR SER ILE ALA VAL VAL SER LEU ALA GLU TYR PRO SEQRES 13 B 548 LEU PRO MET GLN ILE GLU ASP LEU THR PHE PRO SER SER SEQRES 14 B 548 VAL PHE LYS LYS GLN GLU GLU ASP ILE ALA LYS VAL ASP SEQRES 15 B 548 GLU LYS ILE ALA LYS PHE LEU LYS ASP ASN GLU GLY LYS SEQRES 16 B 548 ASP LEU THR LYS ARG PRO LEU LYS ASP GLU TYR ALA LYS SEQRES 17 B 548 LEU LEU LYS GLU LYS ALA SER ALA GLN LYS TYR VAL LYS SEQRES 18 B 548 VAL SER GLN ASP THR ARG LEU ASP ASN ARG MET LEU ASP SEQRES 19 B 548 LEU ARG THR VAL THR ASN ILE ALA ILE PHE ARG ILE GLN SEQRES 20 B 548 SER ALA CYS CYS GLY LEU PHE ARG GLU PHE LEU THR SER SEQRES 21 B 548 GLN LYS PHE VAL GLU ILE HIS THR PRO LYS LEU ILE GLY SEQRES 22 B 548 CYS SER SER GLU GLY GLY SER ASN ILE PHE GLU VAL LYS SEQRES 23 B 548 TYR PHE ASP ARG LYS ALA TYR LEU ALA GLN SER PRO GLN SEQRES 24 B 548 LEU TYR LYS GLN MET ALA ILE MET GLY ASP PHE ARG LYS SEQRES 25 B 548 VAL PHE GLU VAL GLY PRO VAL PHE ARG ALA GLU ASN SER SEQRES 26 B 548 ASN THR ARG ARG HIS LEU THR GLU PHE GLU GLY LEU ASP SEQRES 27 B 548 ILE GLU MET GLU ILE VAL GLU ASN TYR HIS GLU CYS ILE SEQRES 28 B 548 ASP VAL MET GLU LYS LEU PHE THR PHE ILE PHE ASP GLU SEQRES 29 B 548 ILE PRO LYS ARG PHE PRO ASP GLU LEU LYS VAL ILE ARG SEQRES 30 B 548 LYS GLN TYR PRO PHE GLU ASP LEU ILE TYR ARG PRO PHE SEQRES 31 B 548 LEU ARG LEU THR TYR LYS GLU ALA ILE GLU MET LEU ARG SEQRES 32 B 548 ALA SER GLY GLU THR ILE GLY ASP TYR ASP ASP PHE THR SEQRES 33 B 548 THR PRO GLN GLU VAL LYS LEU GLY GLU LEU ILE LYS ALA SEQRES 34 B 548 LYS TYR ASN THR ASP PHE TYR ILE LEU ASP LYS PHE PRO SEQRES 35 B 548 ALA ALA ILE ARG PRO PHE TYR THR MET PRO ASP ILE ASP SEQRES 36 B 548 ASP PRO ASN TYR SER ASN SER TYR ASP VAL PHE VAL ARG SEQRES 37 B 548 GLY GLN GLU ILE THR SER GLY ALA GLN ARG ILE HIS ASP SEQRES 38 B 548 PRO GLU PHE LEU MET LYS ARG CYS ILE GLU LYS GLY VAL SEQRES 39 B 548 ASP PRO ALA THR LEU LYS ASP TYR ILE GLU SER PHE ARG SEQRES 40 B 548 PHE GLY SER TRP PRO HIS ALA GLY CYS GLY ILE GLY LEU SEQRES 41 B 548 GLU ARG ILE THR MET LEU TYR LEU GLY ILE PRO ASN ILE SEQRES 42 B 548 ARG LYS VAL THR LEU PHE PRO ARG ASP PRO ILE ARG LEU SEQRES 43 B 548 ASN PRO FORMUL 3 HOH *78(H2 O) HELIX 1 1 GLN A 37 LYS A 41 5 5 HELIX 2 2 GLU A 48 LEU A 52 5 5 HELIX 3 3 VAL A 53 ALA A 57 5 5 HELIX 4 4 SER A 99 LYS A 108 1 10 HELIX 5 5 ILE A 157 THR A 161 5 5 HELIX 6 6 PRO A 163 ILE A 174 1 12 HELIX 7 7 SER A 219 ASP A 225 1 7 HELIX 8 8 ASN A 226 LEU A 231 1 6 HELIX 9 9 THR A 233 GLN A 257 1 25 HELIX 10 10 PRO A 294 MET A 303 1 10 HELIX 11 11 TYR A 343 PHE A 365 1 23 HELIX 12 12 PHE A 365 TYR A 376 1 12 HELIX 13 13 TYR A 391 SER A 401 1 11 HELIX 14 14 THR A 412 ASN A 428 1 17 HELIX 15 15 PRO A 438 ARG A 442 5 5 HELIX 16 16 ASP A 477 LYS A 488 1 12 HELIX 17 17 ASP A 491 THR A 494 5 4 HELIX 18 18 LEU A 495 SER A 501 1 7 HELIX 19 19 LEU A 516 LEU A 524 1 9 HELIX 20 20 ASN A 528 THR A 533 5 6 HELIX 21 21 GLN B 37 LYS B 41 5 5 HELIX 22 22 GLU B 48 LEU B 52 5 5 HELIX 23 23 VAL B 53 ALA B 57 5 5 HELIX 24 24 SER B 99 LYS B 108 1 10 HELIX 25 25 ILE B 157 PHE B 162 1 6 HELIX 26 26 SER B 164 ILE B 174 1 11 HELIX 27 27 SER B 219 ASP B 225 1 7 HELIX 28 28 ASN B 226 LEU B 231 1 6 HELIX 29 29 THR B 233 GLN B 257 1 25 HELIX 30 30 PRO B 294 MET B 303 1 10 HELIX 31 31 TYR B 343 PHE B 365 1 23 HELIX 32 32 PHE B 365 TYR B 376 1 12 HELIX 33 33 TYR B 391 SER B 401 1 11 HELIX 34 34 THR B 412 ASN B 428 1 17 HELIX 35 35 PRO B 438 ARG B 442 5 5 HELIX 36 36 ASP B 477 LYS B 488 1 12 HELIX 37 37 ASP B 491 THR B 494 5 4 HELIX 38 38 LEU B 495 SER B 501 1 7 HELIX 39 39 LEU B 516 LEU B 524 1 9 HELIX 40 40 ASN B 528 THR B 533 5 6 SHEET 1 A 7 PHE A 28 VAL A 30 0 SHEET 2 A 7 VAL A 136 SER A 147 1 O VAL A 145 N LYS A 29 SHEET 3 A 7 SER A 113 ALA A 123 -1 N LYS A 122 O GLU A 137 SHEET 4 A 7 THR A 60 GLY A 72 -1 N VAL A 61 O GLY A 119 SHEET 5 A 7 MET A 76 LYS A 83 -1 O PHE A 80 N ALA A 69 SHEET 6 A 7 TYR A 86 MET A 93 -1 O VAL A 92 N VAL A 77 SHEET 7 A 7 VAL A 136 SER A 147 1 O ILE A 138 N LEU A 91 SHEET 1 B 8 VAL A 260 GLU A 261 0 SHEET 2 B 8 LYS A 308 VAL A 315 1 O LYS A 308 N VAL A 260 SHEET 3 B 8 PHE A 330 GLU A 338 -1 O GLY A 332 N GLY A 313 SHEET 4 B 8 HIS A 509 GLY A 515 -1 O ILE A 514 N LEU A 333 SHEET 5 B 8 GLN A 466 ARG A 474 -1 N ARG A 474 O HIS A 509 SHEET 6 B 8 SER A 458 VAL A 463 -1 N VAL A 463 O GLN A 466 SHEET 7 B 8 PHE A 431 ASP A 435 -1 N TYR A 432 O PHE A 462 SHEET 8 B 8 LEU A 387 THR A 390 1 N LEU A 387 O ILE A 433 SHEET 1 C 7 PHE B 28 VAL B 30 0 SHEET 2 C 7 VAL B 136 SER B 147 1 O VAL B 145 N LYS B 29 SHEET 3 C 7 SER B 113 ALA B 123 -1 N ILE B 120 O HIS B 139 SHEET 4 C 7 THR B 60 GLY B 72 -1 N VAL B 61 O GLY B 119 SHEET 5 C 7 MET B 76 LYS B 83 -1 O PHE B 78 N ARG B 71 SHEET 6 C 7 TYR B 86 MET B 93 -1 O VAL B 92 N VAL B 77 SHEET 7 C 7 VAL B 136 SER B 147 1 O ILE B 138 N LEU B 91 SHEET 1 D 8 VAL B 260 GLU B 261 0 SHEET 2 D 8 LYS B 308 VAL B 315 1 O LYS B 308 N VAL B 260 SHEET 3 D 8 PHE B 330 GLU B 338 -1 O PHE B 330 N VAL B 315 SHEET 4 D 8 HIS B 509 GLY B 515 -1 O CYS B 512 N ILE B 335 SHEET 5 D 8 GLN B 466 ARG B 474 -1 N ARG B 474 O HIS B 509 SHEET 6 D 8 SER B 458 VAL B 463 -1 N VAL B 463 O GLN B 466 SHEET 7 D 8 PHE B 431 ASP B 435 -1 N LEU B 434 O ASP B 460 SHEET 8 D 8 LEU B 387 THR B 390 1 N LEU B 389 O ASP B 435 CISPEP 1 TYR A 151 PRO A 152 0 1.15 CISPEP 2 ALA A 212 GLN A 213 0 13.01 CISPEP 3 ARG A 384 PRO A 385 0 0.41 CISPEP 4 ASN A 543 PRO A 544 0 -0.38 CISPEP 5 TYR B 151 PRO B 152 0 2.18 CISPEP 6 ARG B 384 PRO B 385 0 0.58 CISPEP 7 ASN B 543 PRO B 544 0 14.54 CRYST1 247.848 247.848 56.295 90.00 90.00 120.00 H 3 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004035 0.002329 0.000000 0.00000 SCALE2 0.000000 0.004659 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017764 0.00000