data_3I7M # _entry.id 3I7M # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.399 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3I7M pdb_00003i7m 10.2210/pdb3i7m/pdb RCSB RCSB054065 ? ? WWPDB D_1000054065 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-07-14 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 4 'Structure model' 1 3 2024-11-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Source and taxonomy' 3 2 'Structure model' 'Version format compliance' 4 3 'Structure model' 'Refinement description' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Database references' 7 4 'Structure model' 'Derived calculations' 8 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' pdbx_entry_details 6 4 'Structure model' pdbx_modification_feature 7 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # _pdbx_database_status.entry_id 3I7M _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-07-08 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id APC64794.2 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Osipiuk, J.' 1 'Xu, X.' 2 'Cui, H.' 3 'Ng, J.' 4 'Savchenko, A.' 5 'Edwards, A.M.' 6 'Joachimiak, A.' 7 'Midwest Center for Structural Genomics (MCSG)' 8 # _citation.id primary _citation.title 'X-ray crystal structure of N-terminal domain of Xaa-Pro dipeptidase from Lactobacillus brevis.' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Osipiuk, J.' 1 ? primary 'Xu, X.' 2 ? primary 'Cui, H.' 3 ? primary 'Ng, J.' 4 ? primary 'Savchenko, A.' 5 ? primary 'Edwards, A.M.' 6 ? primary 'Joachimiak, A.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Xaa-Pro dipeptidase' 16122.450 1 ? ? ? ? 2 water nat water 18.015 193 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Mername-AA019 peptidase. Metallo peptidase. MEROPS family M24B' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GH(MSE)TKLEQIQQWTAQHHAS(MSE)TYLSNPKTIEYLTGFGSDPIERVLALVVFPDQDPFIFAPALEVEVIKETGWQ FPVIGYLDHENPWA(MSE)IADQVKQRHVNPEHVAIEKGQLQVAR(MSE)EALAAQFSAPSFDLDITSFIEH(MSE)RGS ; _entity_poly.pdbx_seq_one_letter_code_can ;GHMTKLEQIQQWTAQHHASMTYLSNPKTIEYLTGFGSDPIERVLALVVFPDQDPFIFAPALEVEVIKETGWQFPVIGYLD HENPWAMIADQVKQRHVNPEHVAIEKGQLQVARMEALAAQFSAPSFDLDITSFIEHMRGS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier APC64794.2 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 HIS n 1 3 MSE n 1 4 THR n 1 5 LYS n 1 6 LEU n 1 7 GLU n 1 8 GLN n 1 9 ILE n 1 10 GLN n 1 11 GLN n 1 12 TRP n 1 13 THR n 1 14 ALA n 1 15 GLN n 1 16 HIS n 1 17 HIS n 1 18 ALA n 1 19 SER n 1 20 MSE n 1 21 THR n 1 22 TYR n 1 23 LEU n 1 24 SER n 1 25 ASN n 1 26 PRO n 1 27 LYS n 1 28 THR n 1 29 ILE n 1 30 GLU n 1 31 TYR n 1 32 LEU n 1 33 THR n 1 34 GLY n 1 35 PHE n 1 36 GLY n 1 37 SER n 1 38 ASP n 1 39 PRO n 1 40 ILE n 1 41 GLU n 1 42 ARG n 1 43 VAL n 1 44 LEU n 1 45 ALA n 1 46 LEU n 1 47 VAL n 1 48 VAL n 1 49 PHE n 1 50 PRO n 1 51 ASP n 1 52 GLN n 1 53 ASP n 1 54 PRO n 1 55 PHE n 1 56 ILE n 1 57 PHE n 1 58 ALA n 1 59 PRO n 1 60 ALA n 1 61 LEU n 1 62 GLU n 1 63 VAL n 1 64 GLU n 1 65 VAL n 1 66 ILE n 1 67 LYS n 1 68 GLU n 1 69 THR n 1 70 GLY n 1 71 TRP n 1 72 GLN n 1 73 PHE n 1 74 PRO n 1 75 VAL n 1 76 ILE n 1 77 GLY n 1 78 TYR n 1 79 LEU n 1 80 ASP n 1 81 HIS n 1 82 GLU n 1 83 ASN n 1 84 PRO n 1 85 TRP n 1 86 ALA n 1 87 MSE n 1 88 ILE n 1 89 ALA n 1 90 ASP n 1 91 GLN n 1 92 VAL n 1 93 LYS n 1 94 GLN n 1 95 ARG n 1 96 HIS n 1 97 VAL n 1 98 ASN n 1 99 PRO n 1 100 GLU n 1 101 HIS n 1 102 VAL n 1 103 ALA n 1 104 ILE n 1 105 GLU n 1 106 LYS n 1 107 GLY n 1 108 GLN n 1 109 LEU n 1 110 GLN n 1 111 VAL n 1 112 ALA n 1 113 ARG n 1 114 MSE n 1 115 GLU n 1 116 ALA n 1 117 LEU n 1 118 ALA n 1 119 ALA n 1 120 GLN n 1 121 PHE n 1 122 SER n 1 123 ALA n 1 124 PRO n 1 125 SER n 1 126 PHE n 1 127 ASP n 1 128 LEU n 1 129 ASP n 1 130 ILE n 1 131 THR n 1 132 SER n 1 133 PHE n 1 134 ILE n 1 135 GLU n 1 136 HIS n 1 137 MSE n 1 138 ARG n 1 139 GLY n 1 140 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene LVIS_1204 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 367' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Lactobacillus brevis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 387344 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pET15b modified' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -1 ? ? ? A . n A 1 2 HIS 2 0 ? ? ? A . n A 1 3 MSE 3 1 ? ? ? A . n A 1 4 THR 4 2 2 THR THR A . n A 1 5 LYS 5 3 3 LYS LYS A . n A 1 6 LEU 6 4 4 LEU LEU A . n A 1 7 GLU 7 5 5 GLU GLU A . n A 1 8 GLN 8 6 6 GLN GLN A . n A 1 9 ILE 9 7 7 ILE ILE A . n A 1 10 GLN 10 8 8 GLN GLN A . n A 1 11 GLN 11 9 9 GLN GLN A . n A 1 12 TRP 12 10 10 TRP TRP A . n A 1 13 THR 13 11 11 THR THR A . n A 1 14 ALA 14 12 12 ALA ALA A . n A 1 15 GLN 15 13 13 GLN GLN A . n A 1 16 HIS 16 14 14 HIS HIS A . n A 1 17 HIS 17 15 15 HIS HIS A . n A 1 18 ALA 18 16 16 ALA ALA A . n A 1 19 SER 19 17 17 SER SER A . n A 1 20 MSE 20 18 18 MSE MSE A . n A 1 21 THR 21 19 19 THR THR A . n A 1 22 TYR 22 20 20 TYR TYR A . n A 1 23 LEU 23 21 21 LEU LEU A . n A 1 24 SER 24 22 22 SER SER A . n A 1 25 ASN 25 23 23 ASN ASN A . n A 1 26 PRO 26 24 24 PRO PRO A . n A 1 27 LYS 27 25 25 LYS LYS A . n A 1 28 THR 28 26 26 THR THR A . n A 1 29 ILE 29 27 27 ILE ILE A . n A 1 30 GLU 30 28 28 GLU GLU A . n A 1 31 TYR 31 29 29 TYR TYR A . n A 1 32 LEU 32 30 30 LEU LEU A . n A 1 33 THR 33 31 31 THR THR A . n A 1 34 GLY 34 32 32 GLY GLY A . n A 1 35 PHE 35 33 33 PHE PHE A . n A 1 36 GLY 36 34 34 GLY GLY A . n A 1 37 SER 37 35 35 SER SER A . n A 1 38 ASP 38 36 36 ASP ASP A . n A 1 39 PRO 39 37 37 PRO PRO A . n A 1 40 ILE 40 38 38 ILE ILE A . n A 1 41 GLU 41 39 39 GLU GLU A . n A 1 42 ARG 42 40 40 ARG ARG A . n A 1 43 VAL 43 41 41 VAL VAL A . n A 1 44 LEU 44 42 42 LEU LEU A . n A 1 45 ALA 45 43 43 ALA ALA A . n A 1 46 LEU 46 44 44 LEU LEU A . n A 1 47 VAL 47 45 45 VAL VAL A . n A 1 48 VAL 48 46 46 VAL VAL A . n A 1 49 PHE 49 47 47 PHE PHE A . n A 1 50 PRO 50 48 48 PRO PRO A . n A 1 51 ASP 51 49 49 ASP ASP A . n A 1 52 GLN 52 50 50 GLN GLN A . n A 1 53 ASP 53 51 51 ASP ASP A . n A 1 54 PRO 54 52 52 PRO PRO A . n A 1 55 PHE 55 53 53 PHE PHE A . n A 1 56 ILE 56 54 54 ILE ILE A . n A 1 57 PHE 57 55 55 PHE PHE A . n A 1 58 ALA 58 56 56 ALA ALA A . n A 1 59 PRO 59 57 57 PRO PRO A . n A 1 60 ALA 60 58 58 ALA ALA A . n A 1 61 LEU 61 59 59 LEU LEU A . n A 1 62 GLU 62 60 60 GLU GLU A . n A 1 63 VAL 63 61 61 VAL VAL A . n A 1 64 GLU 64 62 62 GLU GLU A . n A 1 65 VAL 65 63 63 VAL VAL A . n A 1 66 ILE 66 64 64 ILE ILE A . n A 1 67 LYS 67 65 65 LYS LYS A . n A 1 68 GLU 68 66 66 GLU GLU A . n A 1 69 THR 69 67 67 THR THR A . n A 1 70 GLY 70 68 68 GLY GLY A . n A 1 71 TRP 71 69 69 TRP TRP A . n A 1 72 GLN 72 70 70 GLN GLN A . n A 1 73 PHE 73 71 71 PHE PHE A . n A 1 74 PRO 74 72 72 PRO PRO A . n A 1 75 VAL 75 73 73 VAL VAL A . n A 1 76 ILE 76 74 74 ILE ILE A . n A 1 77 GLY 77 75 75 GLY GLY A . n A 1 78 TYR 78 76 76 TYR TYR A . n A 1 79 LEU 79 77 77 LEU LEU A . n A 1 80 ASP 80 78 78 ASP ASP A . n A 1 81 HIS 81 79 79 HIS HIS A . n A 1 82 GLU 82 80 80 GLU GLU A . n A 1 83 ASN 83 81 81 ASN ASN A . n A 1 84 PRO 84 82 82 PRO PRO A . n A 1 85 TRP 85 83 83 TRP TRP A . n A 1 86 ALA 86 84 84 ALA ALA A . n A 1 87 MSE 87 85 85 MSE MSE A . n A 1 88 ILE 88 86 86 ILE ILE A . n A 1 89 ALA 89 87 87 ALA ALA A . n A 1 90 ASP 90 88 88 ASP ASP A . n A 1 91 GLN 91 89 89 GLN GLN A . n A 1 92 VAL 92 90 90 VAL VAL A . n A 1 93 LYS 93 91 91 LYS LYS A . n A 1 94 GLN 94 92 92 GLN GLN A . n A 1 95 ARG 95 93 93 ARG ARG A . n A 1 96 HIS 96 94 94 HIS HIS A . n A 1 97 VAL 97 95 95 VAL VAL A . n A 1 98 ASN 98 96 96 ASN ASN A . n A 1 99 PRO 99 97 97 PRO PRO A . n A 1 100 GLU 100 98 98 GLU GLU A . n A 1 101 HIS 101 99 99 HIS HIS A . n A 1 102 VAL 102 100 100 VAL VAL A . n A 1 103 ALA 103 101 101 ALA ALA A . n A 1 104 ILE 104 102 102 ILE ILE A . n A 1 105 GLU 105 103 103 GLU GLU A . n A 1 106 LYS 106 104 104 LYS LYS A . n A 1 107 GLY 107 105 105 GLY GLY A . n A 1 108 GLN 108 106 106 GLN GLN A . n A 1 109 LEU 109 107 107 LEU LEU A . n A 1 110 GLN 110 108 108 GLN GLN A . n A 1 111 VAL 111 109 109 VAL VAL A . n A 1 112 ALA 112 110 110 ALA ALA A . n A 1 113 ARG 113 111 111 ARG ARG A . n A 1 114 MSE 114 112 112 MSE MSE A . n A 1 115 GLU 115 113 113 GLU GLU A . n A 1 116 ALA 116 114 114 ALA ALA A . n A 1 117 LEU 117 115 115 LEU LEU A . n A 1 118 ALA 118 116 116 ALA ALA A . n A 1 119 ALA 119 117 117 ALA ALA A . n A 1 120 GLN 120 118 118 GLN GLN A . n A 1 121 PHE 121 119 119 PHE PHE A . n A 1 122 SER 122 120 120 SER SER A . n A 1 123 ALA 123 121 121 ALA ALA A . n A 1 124 PRO 124 122 122 PRO PRO A . n A 1 125 SER 125 123 123 SER SER A . n A 1 126 PHE 126 124 124 PHE PHE A . n A 1 127 ASP 127 125 125 ASP ASP A . n A 1 128 LEU 128 126 126 LEU LEU A . n A 1 129 ASP 129 127 127 ASP ASP A . n A 1 130 ILE 130 128 128 ILE ILE A . n A 1 131 THR 131 129 129 THR THR A . n A 1 132 SER 132 130 130 SER SER A . n A 1 133 PHE 133 131 131 PHE PHE A . n A 1 134 ILE 134 132 132 ILE ILE A . n A 1 135 GLU 135 133 133 GLU GLU A . n A 1 136 HIS 136 134 134 HIS HIS A . n A 1 137 MSE 137 135 135 MSE MSE A . n A 1 138 ARG 138 136 ? ? ? A . n A 1 139 GLY 139 137 ? ? ? A . n A 1 140 SER 140 138 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 139 139 HOH HOH A . B 2 HOH 2 140 140 HOH HOH A . B 2 HOH 3 141 141 HOH HOH A . B 2 HOH 4 142 142 HOH HOH A . B 2 HOH 5 143 143 HOH HOH A . B 2 HOH 6 144 144 HOH HOH A . B 2 HOH 7 145 145 HOH HOH A . B 2 HOH 8 146 146 HOH HOH A . B 2 HOH 9 147 147 HOH HOH A . B 2 HOH 10 148 148 HOH HOH A . B 2 HOH 11 149 149 HOH HOH A . B 2 HOH 12 150 150 HOH HOH A . B 2 HOH 13 151 151 HOH HOH A . B 2 HOH 14 152 152 HOH HOH A . B 2 HOH 15 153 153 HOH HOH A . B 2 HOH 16 154 154 HOH HOH A . B 2 HOH 17 155 155 HOH HOH A . B 2 HOH 18 156 156 HOH HOH A . B 2 HOH 19 157 157 HOH HOH A . B 2 HOH 20 158 158 HOH HOH A . B 2 HOH 21 159 159 HOH HOH A . B 2 HOH 22 160 160 HOH HOH A . B 2 HOH 23 161 161 HOH HOH A . B 2 HOH 24 162 162 HOH HOH A . B 2 HOH 25 163 163 HOH HOH A . B 2 HOH 26 164 164 HOH HOH A . B 2 HOH 27 165 165 HOH HOH A . B 2 HOH 28 166 166 HOH HOH A . B 2 HOH 29 167 167 HOH HOH A . B 2 HOH 30 168 168 HOH HOH A . B 2 HOH 31 169 169 HOH HOH A . B 2 HOH 32 170 170 HOH HOH A . B 2 HOH 33 171 171 HOH HOH A . B 2 HOH 34 172 172 HOH HOH A . B 2 HOH 35 173 173 HOH HOH A . B 2 HOH 36 174 174 HOH HOH A . B 2 HOH 37 175 175 HOH HOH A . B 2 HOH 38 176 176 HOH HOH A . B 2 HOH 39 177 177 HOH HOH A . B 2 HOH 40 178 178 HOH HOH A . B 2 HOH 41 179 179 HOH HOH A . B 2 HOH 42 180 180 HOH HOH A . B 2 HOH 43 181 181 HOH HOH A . B 2 HOH 44 182 182 HOH HOH A . B 2 HOH 45 183 183 HOH HOH A . B 2 HOH 46 184 184 HOH HOH A . B 2 HOH 47 185 185 HOH HOH A . B 2 HOH 48 186 186 HOH HOH A . B 2 HOH 49 187 187 HOH HOH A . B 2 HOH 50 188 188 HOH HOH A . B 2 HOH 51 189 189 HOH HOH A . B 2 HOH 52 190 190 HOH HOH A . B 2 HOH 53 191 191 HOH HOH A . B 2 HOH 54 192 192 HOH HOH A . B 2 HOH 55 193 193 HOH HOH A . B 2 HOH 56 194 1 HOH HOH A . B 2 HOH 57 195 2 HOH HOH A . B 2 HOH 58 196 3 HOH HOH A . B 2 HOH 59 197 4 HOH HOH A . B 2 HOH 60 198 5 HOH HOH A . B 2 HOH 61 199 6 HOH HOH A . B 2 HOH 62 200 7 HOH HOH A . B 2 HOH 63 201 8 HOH HOH A . B 2 HOH 64 202 9 HOH HOH A . B 2 HOH 65 203 10 HOH HOH A . B 2 HOH 66 204 11 HOH HOH A . B 2 HOH 67 205 12 HOH HOH A . B 2 HOH 68 206 13 HOH HOH A . B 2 HOH 69 207 14 HOH HOH A . B 2 HOH 70 208 15 HOH HOH A . B 2 HOH 71 209 16 HOH HOH A . B 2 HOH 72 210 17 HOH HOH A . B 2 HOH 73 211 18 HOH HOH A . B 2 HOH 74 212 19 HOH HOH A . B 2 HOH 75 213 20 HOH HOH A . B 2 HOH 76 214 21 HOH HOH A . B 2 HOH 77 215 22 HOH HOH A . B 2 HOH 78 216 23 HOH HOH A . B 2 HOH 79 217 24 HOH HOH A . B 2 HOH 80 218 25 HOH HOH A . B 2 HOH 81 219 26 HOH HOH A . B 2 HOH 82 220 27 HOH HOH A . B 2 HOH 83 221 28 HOH HOH A . B 2 HOH 84 222 29 HOH HOH A . B 2 HOH 85 223 30 HOH HOH A . B 2 HOH 86 224 31 HOH HOH A . B 2 HOH 87 225 32 HOH HOH A . B 2 HOH 88 226 33 HOH HOH A . B 2 HOH 89 227 34 HOH HOH A . B 2 HOH 90 228 35 HOH HOH A . B 2 HOH 91 229 36 HOH HOH A . B 2 HOH 92 230 37 HOH HOH A . B 2 HOH 93 231 38 HOH HOH A . B 2 HOH 94 232 39 HOH HOH A . B 2 HOH 95 233 40 HOH HOH A . B 2 HOH 96 234 41 HOH HOH A . B 2 HOH 97 235 42 HOH HOH A . B 2 HOH 98 236 43 HOH HOH A . B 2 HOH 99 237 44 HOH HOH A . B 2 HOH 100 238 45 HOH HOH A . B 2 HOH 101 239 46 HOH HOH A . B 2 HOH 102 240 47 HOH HOH A . B 2 HOH 103 241 48 HOH HOH A . B 2 HOH 104 242 49 HOH HOH A . B 2 HOH 105 243 50 HOH HOH A . B 2 HOH 106 244 51 HOH HOH A . B 2 HOH 107 245 52 HOH HOH A . B 2 HOH 108 246 53 HOH HOH A . B 2 HOH 109 247 54 HOH HOH A . B 2 HOH 110 248 55 HOH HOH A . B 2 HOH 111 249 56 HOH HOH A . B 2 HOH 112 250 57 HOH HOH A . B 2 HOH 113 251 58 HOH HOH A . B 2 HOH 114 252 59 HOH HOH A . B 2 HOH 115 253 60 HOH HOH A . B 2 HOH 116 254 61 HOH HOH A . B 2 HOH 117 255 62 HOH HOH A . B 2 HOH 118 256 63 HOH HOH A . B 2 HOH 119 257 64 HOH HOH A . B 2 HOH 120 258 65 HOH HOH A . B 2 HOH 121 259 66 HOH HOH A . B 2 HOH 122 260 67 HOH HOH A . B 2 HOH 123 261 68 HOH HOH A . B 2 HOH 124 262 69 HOH HOH A . B 2 HOH 125 263 70 HOH HOH A . B 2 HOH 126 264 71 HOH HOH A . B 2 HOH 127 265 72 HOH HOH A . B 2 HOH 128 266 73 HOH HOH A . B 2 HOH 129 267 74 HOH HOH A . B 2 HOH 130 268 75 HOH HOH A . B 2 HOH 131 269 76 HOH HOH A . B 2 HOH 132 270 77 HOH HOH A . B 2 HOH 133 271 78 HOH HOH A . B 2 HOH 134 272 79 HOH HOH A . B 2 HOH 135 273 80 HOH HOH A . B 2 HOH 136 274 81 HOH HOH A . B 2 HOH 137 275 82 HOH HOH A . B 2 HOH 138 276 83 HOH HOH A . B 2 HOH 139 277 84 HOH HOH A . B 2 HOH 140 278 85 HOH HOH A . B 2 HOH 141 279 86 HOH HOH A . B 2 HOH 142 280 87 HOH HOH A . B 2 HOH 143 281 88 HOH HOH A . B 2 HOH 144 282 89 HOH HOH A . B 2 HOH 145 283 90 HOH HOH A . B 2 HOH 146 284 91 HOH HOH A . B 2 HOH 147 285 92 HOH HOH A . B 2 HOH 148 286 93 HOH HOH A . B 2 HOH 149 287 94 HOH HOH A . B 2 HOH 150 288 95 HOH HOH A . B 2 HOH 151 289 96 HOH HOH A . B 2 HOH 152 290 97 HOH HOH A . B 2 HOH 153 291 98 HOH HOH A . B 2 HOH 154 292 99 HOH HOH A . B 2 HOH 155 293 100 HOH HOH A . B 2 HOH 156 294 101 HOH HOH A . B 2 HOH 157 295 102 HOH HOH A . B 2 HOH 158 296 103 HOH HOH A . B 2 HOH 159 297 104 HOH HOH A . B 2 HOH 160 298 105 HOH HOH A . B 2 HOH 161 299 106 HOH HOH A . B 2 HOH 162 300 107 HOH HOH A . B 2 HOH 163 301 108 HOH HOH A . B 2 HOH 164 302 109 HOH HOH A . B 2 HOH 165 303 110 HOH HOH A . B 2 HOH 166 304 111 HOH HOH A . B 2 HOH 167 305 112 HOH HOH A . B 2 HOH 168 306 113 HOH HOH A . B 2 HOH 169 307 114 HOH HOH A . B 2 HOH 170 308 115 HOH HOH A . B 2 HOH 171 309 116 HOH HOH A . B 2 HOH 172 310 117 HOH HOH A . B 2 HOH 173 311 118 HOH HOH A . B 2 HOH 174 312 119 HOH HOH A . B 2 HOH 175 313 120 HOH HOH A . B 2 HOH 176 314 121 HOH HOH A . B 2 HOH 177 315 122 HOH HOH A . B 2 HOH 178 316 123 HOH HOH A . B 2 HOH 179 317 124 HOH HOH A . B 2 HOH 180 318 125 HOH HOH A . B 2 HOH 181 319 126 HOH HOH A . B 2 HOH 182 320 127 HOH HOH A . B 2 HOH 183 321 128 HOH HOH A . B 2 HOH 184 322 129 HOH HOH A . B 2 HOH 185 323 130 HOH HOH A . B 2 HOH 186 324 131 HOH HOH A . B 2 HOH 187 325 132 HOH HOH A . B 2 HOH 188 326 133 HOH HOH A . B 2 HOH 189 327 134 HOH HOH A . B 2 HOH 190 328 135 HOH HOH A . B 2 HOH 191 329 136 HOH HOH A . B 2 HOH 192 330 137 HOH HOH A . B 2 HOH 193 331 138 HOH HOH A . # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 REFMAC 5.5.0054 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.005 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 SBC-Collect . ? ? ? ? 'data collection' ? ? ? 6 HKL-3000 . ? ? ? ? 'data reduction' ? ? ? 7 HKL-3000 . ? ? ? ? 'data scaling' ? ? ? 8 SHELXD . ? ? ? ? phasing ? ? ? 9 MLPHARE . ? ? ? ? phasing ? ? ? 10 DM . ? ? ? ? phasing ? ? ? 11 SOLVE . ? ? ? ? phasing ? ? ? 12 RESOLVE . ? ? ? ? phasing ? ? ? 13 HKL-3000 . ? ? ? ? phasing ? ? ? # _cell.length_a 53.867 _cell.length_b 50.962 _cell.length_c 49.289 _cell.angle_alpha 90.000 _cell.angle_beta 104.330 _cell.angle_gamma 90.000 _cell.entry_id 3I7M _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.entry_id 3I7M _symmetry.Int_Tables_number 5 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 3I7M _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.03 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 39.49 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.temp 291 _exptl_crystal_grow.pdbx_details '0.1 M Tris buffer, 0.2 M ammonium sulfate, 25% PEG-3350, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 291K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210r' _diffrn_detector.pdbx_collection_date 2009-06-29 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'double crystal monochromator' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9792 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-BM' _diffrn_source.pdbx_wavelength_list 0.9792 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-BM # _reflns.entry_id 3I7M _reflns.d_resolution_high 1.460 _reflns.d_resolution_low 36.5 _reflns.number_obs 22642 _reflns.pdbx_Rmerge_I_obs 0.053 _reflns.pdbx_netI_over_sigmaI 14.600 _reflns.pdbx_chi_squared 1.561 _reflns.pdbx_redundancy 9.100 _reflns.percent_possible_obs 99.900 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.number_all 22642 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate 27.0 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.46 _reflns_shell.d_res_low 1.49 _reflns_shell.number_measured_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_unique_obs ? _reflns_shell.Rmerge_I_obs 0.550 _reflns_shell.meanI_over_sigI_obs 2.05 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared 0.987 _reflns_shell.pdbx_redundancy 3.20 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1115 _reflns_shell.percent_possible_all 98.80 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3I7M _refine.ls_d_res_high 1.460 _refine.ls_d_res_low 36.500 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.430 _refine.ls_number_reflns_obs 22596 _refine.ls_number_reflns_all 22596 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : RESIDUAL ONLY' _refine.ls_R_factor_all 0.164 _refine.ls_R_factor_obs 0.164 _refine.ls_R_factor_R_work 0.163 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.198 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1149 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 16.355 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.370 _refine.aniso_B[2][2] -0.330 _refine.aniso_B[3][3] 0.150 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.380 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.973 _refine.correlation_coeff_Fo_to_Fc_free 0.956 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.071 _refine.pdbx_overall_ESU_R_Free 0.074 _refine.overall_SU_ML 0.045 _refine.overall_SU_B 2.605 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 50.09 _refine.B_iso_min 5.11 _refine.occupancy_max 1.00 _refine.occupancy_min 0.24 _refine.pdbx_ls_sigma_I 0 _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1077 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 193 _refine_hist.number_atoms_total 1270 _refine_hist.d_res_high 1.460 _refine_hist.d_res_low 36.500 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1229 0.020 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 803 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1699 1.791 1.927 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 1993 0.998 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 163 6.072 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 67 32.960 25.672 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 205 13.664 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 3 26.763 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 183 0.109 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1415 0.010 0.021 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 241 0.003 0.020 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 731 1.107 1.500 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 284 0.364 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1206 1.803 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 498 2.710 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 479 4.123 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.456 _refine_ls_shell.d_res_low 1.494 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 95.050 _refine_ls_shell.number_reflns_R_work 1515 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.275 _refine_ls_shell.R_factor_R_free 0.297 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 79 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1594 _refine_ls_shell.number_reflns_obs 1594 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3I7M _struct.title 'N-terminal domain of Xaa-Pro dipeptidase from Lactobacillus brevis.' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3I7M _struct_keywords.text ;structural genomics, APC64794.2, Xaa-Pro dipeptidase, Metallo peptidase, Creatinase/Prolidase N-terminal domain, PSI-2, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, Hydrolase ; _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q03R62_LACBA _struct_ref.pdbx_db_accession Q03R62 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MTKLEQIQQWTAQHHASMTYLSNPKTIEYLTGFGSDPIERVLALVVFPDQDPFIFAPALEVEVIKETGWQFPVIGYLDHE NPWAMIADQVKQRHVNPEHVAIEKGQLQVARMEALAAQFSAPSFDLDITSFIEHMR ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3I7M _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 138 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q03R62 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 136 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 136 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3I7M GLY A 1 ? UNP Q03R62 ? ? 'expression tag' -1 1 1 3I7M HIS A 2 ? UNP Q03R62 ? ? 'expression tag' 0 2 1 3I7M GLY A 139 ? UNP Q03R62 ? ? 'expression tag' 137 3 1 3I7M SER A 140 ? UNP Q03R62 ? ? 'expression tag' 138 4 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 4 ? HIS A 16 ? THR A 2 HIS A 14 1 ? 13 HELX_P HELX_P2 2 ASN A 25 ? GLY A 34 ? ASN A 23 GLY A 32 1 ? 10 HELX_P HELX_P3 3 GLU A 62 ? GLU A 68 ? GLU A 60 GLU A 66 1 ? 7 HELX_P HELX_P4 4 ASN A 83 ? ARG A 95 ? ASN A 81 ARG A 93 1 ? 13 HELX_P HELX_P5 5 GLN A 110 ? ALA A 119 ? GLN A 108 ALA A 117 1 ? 10 HELX_P HELX_P6 6 ILE A 130 ? MSE A 137 ? ILE A 128 MSE A 135 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A SER 19 C ? ? ? 1_555 A MSE 20 N ? ? A SER 17 A MSE 18 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale2 covale both ? A MSE 20 C ? ? ? 1_555 A THR 21 N ? ? A MSE 18 A THR 19 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale3 covale both ? A ALA 86 C ? ? ? 1_555 A MSE 87 N ? ? A ALA 84 A MSE 85 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale4 covale both ? A MSE 87 C ? ? ? 1_555 A ILE 88 N ? ? A MSE 85 A ILE 86 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale5 covale both ? A ARG 113 C ? ? ? 1_555 A MSE 114 N ? ? A ARG 111 A MSE 112 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale6 covale both ? A MSE 114 C ? ? ? 1_555 A GLU 115 N ? ? A MSE 112 A GLU 113 1_555 ? ? ? ? ? ? ? 1.318 ? ? covale7 covale both ? A HIS 136 C ? ? ? 1_555 A MSE 137 N ? ? A HIS 134 A MSE 135 1_555 ? ? ? ? ? ? ? 1.323 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 MSE A 20 ? . . . . MSE A 18 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 2 MSE A 87 ? . . . . MSE A 85 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 3 MSE A 114 ? . . . . MSE A 112 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 4 MSE A 137 ? . . . . MSE A 135 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? parallel A 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 75 ? TYR A 78 ? VAL A 73 TYR A 76 A 2 PHE A 55 ? PRO A 59 ? PHE A 53 PRO A 57 A 3 ALA A 45 ? VAL A 48 ? ALA A 43 VAL A 46 A 4 MSE A 20 ? LEU A 23 ? MSE A 18 LEU A 21 A 5 HIS A 101 ? ILE A 104 ? HIS A 99 ILE A 102 A 6 SER A 125 ? ASP A 129 ? SER A 123 ASP A 127 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ILE A 76 ? O ILE A 74 N ILE A 56 ? N ILE A 54 A 2 3 O PHE A 55 ? O PHE A 53 N VAL A 47 ? N VAL A 45 A 3 4 O LEU A 46 ? O LEU A 44 N LEU A 23 ? N LEU A 21 A 4 5 N TYR A 22 ? N TYR A 20 O ALA A 103 ? O ALA A 101 A 5 6 N VAL A 102 ? N VAL A 100 O SER A 125 ? O SER A 123 # _pdbx_entry_details.entry_id 3I7M _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 180 ? ? O A HOH 260 ? ? 1.72 2 1 O A HOH 180 ? ? O A HOH 204 ? ? 1.78 3 1 OD1 A ASP 49 ? ? O A HOH 289 ? ? 1.80 4 1 NE2 A GLN 8 ? B O A HOH 290 ? ? 1.91 5 1 OD1 A ASN 96 ? A O A HOH 208 ? ? 2.10 6 1 OD1 A ASP 78 ? B O A HOH 293 ? ? 2.11 7 1 OE2 A GLU 133 ? A O A HOH 253 ? ? 2.13 8 1 CG2 A ILE 38 ? A O A HOH 252 ? ? 2.15 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 192 ? ? 1_555 O A HOH 299 ? ? 4_555 2.03 2 1 O A HOH 206 ? ? 1_555 O A HOH 328 ? ? 3_545 2.16 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 51 ? ? CG A ASP 51 ? ? OD2 A ASP 51 ? ? 112.23 118.30 -6.07 0.90 N 2 1 CB A ASP 125 ? ? CG A ASP 125 ? ? OD1 A ASP 125 ? ? 124.00 118.30 5.70 0.90 N 3 1 CB A ASP 125 ? ? CG A ASP 125 ? ? OD2 A ASP 125 ? ? 111.74 118.30 -6.56 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 49 ? ? -143.38 21.57 2 1 GLU A 98 ? ? -102.86 -96.11 3 1 ALA A 121 ? ? -160.23 68.27 # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 20 A MSE 18 ? MET SELENOMETHIONINE 2 A MSE 87 A MSE 85 ? MET SELENOMETHIONINE 3 A MSE 114 A MSE 112 ? MET SELENOMETHIONINE 4 A MSE 137 A MSE 135 ? MET SELENOMETHIONINE # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 9.8130 5.3560 10.3614 0.0667 0.0487 0.0324 0.0524 -0.0055 -0.0063 1.8307 1.9316 0.7059 -1.0189 -0.1976 -0.0956 0.1662 -0.1299 -0.0363 0.0649 0.0519 0.0571 -0.1267 -0.0894 -0.0474 'X-RAY DIFFRACTION' 2 ? refined 15.8872 -3.4276 14.8207 0.0467 0.0333 0.0619 0.0199 -0.0103 -0.0060 1.7196 1.4355 1.1746 -0.5655 0.2869 0.4607 0.1399 -0.1072 -0.0327 0.0395 -0.1126 0.0102 -0.1098 -0.0402 -0.0179 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 2 A 90 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 A 91 A 135 ? . . . . ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -1 ? A GLY 1 2 1 Y 1 A HIS 0 ? A HIS 2 3 1 Y 1 A MSE 1 ? A MSE 3 4 1 Y 1 A ARG 136 ? A ARG 138 5 1 Y 1 A GLY 137 ? A GLY 139 6 1 Y 1 A SER 138 ? A SER 140 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LYS N N N N 191 LYS CA C N S 192 LYS C C N N 193 LYS O O N N 194 LYS CB C N N 195 LYS CG C N N 196 LYS CD C N N 197 LYS CE C N N 198 LYS NZ N N N 199 LYS OXT O N N 200 LYS H H N N 201 LYS H2 H N N 202 LYS HA H N N 203 LYS HB2 H N N 204 LYS HB3 H N N 205 LYS HG2 H N N 206 LYS HG3 H N N 207 LYS HD2 H N N 208 LYS HD3 H N N 209 LYS HE2 H N N 210 LYS HE3 H N N 211 LYS HZ1 H N N 212 LYS HZ2 H N N 213 LYS HZ3 H N N 214 LYS HXT H N N 215 MSE N N N N 216 MSE CA C N S 217 MSE C C N N 218 MSE O O N N 219 MSE OXT O N N 220 MSE CB C N N 221 MSE CG C N N 222 MSE SE SE N N 223 MSE CE C N N 224 MSE H H N N 225 MSE H2 H N N 226 MSE HA H N N 227 MSE HXT H N N 228 MSE HB2 H N N 229 MSE HB3 H N N 230 MSE HG2 H N N 231 MSE HG3 H N N 232 MSE HE1 H N N 233 MSE HE2 H N N 234 MSE HE3 H N N 235 PHE N N N N 236 PHE CA C N S 237 PHE C C N N 238 PHE O O N N 239 PHE CB C N N 240 PHE CG C Y N 241 PHE CD1 C Y N 242 PHE CD2 C Y N 243 PHE CE1 C Y N 244 PHE CE2 C Y N 245 PHE CZ C Y N 246 PHE OXT O N N 247 PHE H H N N 248 PHE H2 H N N 249 PHE HA H N N 250 PHE HB2 H N N 251 PHE HB3 H N N 252 PHE HD1 H N N 253 PHE HD2 H N N 254 PHE HE1 H N N 255 PHE HE2 H N N 256 PHE HZ H N N 257 PHE HXT H N N 258 PRO N N N N 259 PRO CA C N S 260 PRO C C N N 261 PRO O O N N 262 PRO CB C N N 263 PRO CG C N N 264 PRO CD C N N 265 PRO OXT O N N 266 PRO H H N N 267 PRO HA H N N 268 PRO HB2 H N N 269 PRO HB3 H N N 270 PRO HG2 H N N 271 PRO HG3 H N N 272 PRO HD2 H N N 273 PRO HD3 H N N 274 PRO HXT H N N 275 SER N N N N 276 SER CA C N S 277 SER C C N N 278 SER O O N N 279 SER CB C N N 280 SER OG O N N 281 SER OXT O N N 282 SER H H N N 283 SER H2 H N N 284 SER HA H N N 285 SER HB2 H N N 286 SER HB3 H N N 287 SER HG H N N 288 SER HXT H N N 289 THR N N N N 290 THR CA C N S 291 THR C C N N 292 THR O O N N 293 THR CB C N R 294 THR OG1 O N N 295 THR CG2 C N N 296 THR OXT O N N 297 THR H H N N 298 THR H2 H N N 299 THR HA H N N 300 THR HB H N N 301 THR HG1 H N N 302 THR HG21 H N N 303 THR HG22 H N N 304 THR HG23 H N N 305 THR HXT H N N 306 TRP N N N N 307 TRP CA C N S 308 TRP C C N N 309 TRP O O N N 310 TRP CB C N N 311 TRP CG C Y N 312 TRP CD1 C Y N 313 TRP CD2 C Y N 314 TRP NE1 N Y N 315 TRP CE2 C Y N 316 TRP CE3 C Y N 317 TRP CZ2 C Y N 318 TRP CZ3 C Y N 319 TRP CH2 C Y N 320 TRP OXT O N N 321 TRP H H N N 322 TRP H2 H N N 323 TRP HA H N N 324 TRP HB2 H N N 325 TRP HB3 H N N 326 TRP HD1 H N N 327 TRP HE1 H N N 328 TRP HE3 H N N 329 TRP HZ2 H N N 330 TRP HZ3 H N N 331 TRP HH2 H N N 332 TRP HXT H N N 333 TYR N N N N 334 TYR CA C N S 335 TYR C C N N 336 TYR O O N N 337 TYR CB C N N 338 TYR CG C Y N 339 TYR CD1 C Y N 340 TYR CD2 C Y N 341 TYR CE1 C Y N 342 TYR CE2 C Y N 343 TYR CZ C Y N 344 TYR OH O N N 345 TYR OXT O N N 346 TYR H H N N 347 TYR H2 H N N 348 TYR HA H N N 349 TYR HB2 H N N 350 TYR HB3 H N N 351 TYR HD1 H N N 352 TYR HD2 H N N 353 TYR HE1 H N N 354 TYR HE2 H N N 355 TYR HH H N N 356 TYR HXT H N N 357 VAL N N N N 358 VAL CA C N S 359 VAL C C N N 360 VAL O O N N 361 VAL CB C N N 362 VAL CG1 C N N 363 VAL CG2 C N N 364 VAL OXT O N N 365 VAL H H N N 366 VAL H2 H N N 367 VAL HA H N N 368 VAL HB H N N 369 VAL HG11 H N N 370 VAL HG12 H N N 371 VAL HG13 H N N 372 VAL HG21 H N N 373 VAL HG22 H N N 374 VAL HG23 H N N 375 VAL HXT H N N 376 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MSE N CA sing N N 205 MSE N H sing N N 206 MSE N H2 sing N N 207 MSE CA C sing N N 208 MSE CA CB sing N N 209 MSE CA HA sing N N 210 MSE C O doub N N 211 MSE C OXT sing N N 212 MSE OXT HXT sing N N 213 MSE CB CG sing N N 214 MSE CB HB2 sing N N 215 MSE CB HB3 sing N N 216 MSE CG SE sing N N 217 MSE CG HG2 sing N N 218 MSE CG HG3 sing N N 219 MSE SE CE sing N N 220 MSE CE HE1 sing N N 221 MSE CE HE2 sing N N 222 MSE CE HE3 sing N N 223 PHE N CA sing N N 224 PHE N H sing N N 225 PHE N H2 sing N N 226 PHE CA C sing N N 227 PHE CA CB sing N N 228 PHE CA HA sing N N 229 PHE C O doub N N 230 PHE C OXT sing N N 231 PHE CB CG sing N N 232 PHE CB HB2 sing N N 233 PHE CB HB3 sing N N 234 PHE CG CD1 doub Y N 235 PHE CG CD2 sing Y N 236 PHE CD1 CE1 sing Y N 237 PHE CD1 HD1 sing N N 238 PHE CD2 CE2 doub Y N 239 PHE CD2 HD2 sing N N 240 PHE CE1 CZ doub Y N 241 PHE CE1 HE1 sing N N 242 PHE CE2 CZ sing Y N 243 PHE CE2 HE2 sing N N 244 PHE CZ HZ sing N N 245 PHE OXT HXT sing N N 246 PRO N CA sing N N 247 PRO N CD sing N N 248 PRO N H sing N N 249 PRO CA C sing N N 250 PRO CA CB sing N N 251 PRO CA HA sing N N 252 PRO C O doub N N 253 PRO C OXT sing N N 254 PRO CB CG sing N N 255 PRO CB HB2 sing N N 256 PRO CB HB3 sing N N 257 PRO CG CD sing N N 258 PRO CG HG2 sing N N 259 PRO CG HG3 sing N N 260 PRO CD HD2 sing N N 261 PRO CD HD3 sing N N 262 PRO OXT HXT sing N N 263 SER N CA sing N N 264 SER N H sing N N 265 SER N H2 sing N N 266 SER CA C sing N N 267 SER CA CB sing N N 268 SER CA HA sing N N 269 SER C O doub N N 270 SER C OXT sing N N 271 SER CB OG sing N N 272 SER CB HB2 sing N N 273 SER CB HB3 sing N N 274 SER OG HG sing N N 275 SER OXT HXT sing N N 276 THR N CA sing N N 277 THR N H sing N N 278 THR N H2 sing N N 279 THR CA C sing N N 280 THR CA CB sing N N 281 THR CA HA sing N N 282 THR C O doub N N 283 THR C OXT sing N N 284 THR CB OG1 sing N N 285 THR CB CG2 sing N N 286 THR CB HB sing N N 287 THR OG1 HG1 sing N N 288 THR CG2 HG21 sing N N 289 THR CG2 HG22 sing N N 290 THR CG2 HG23 sing N N 291 THR OXT HXT sing N N 292 TRP N CA sing N N 293 TRP N H sing N N 294 TRP N H2 sing N N 295 TRP CA C sing N N 296 TRP CA CB sing N N 297 TRP CA HA sing N N 298 TRP C O doub N N 299 TRP C OXT sing N N 300 TRP CB CG sing N N 301 TRP CB HB2 sing N N 302 TRP CB HB3 sing N N 303 TRP CG CD1 doub Y N 304 TRP CG CD2 sing Y N 305 TRP CD1 NE1 sing Y N 306 TRP CD1 HD1 sing N N 307 TRP CD2 CE2 doub Y N 308 TRP CD2 CE3 sing Y N 309 TRP NE1 CE2 sing Y N 310 TRP NE1 HE1 sing N N 311 TRP CE2 CZ2 sing Y N 312 TRP CE3 CZ3 doub Y N 313 TRP CE3 HE3 sing N N 314 TRP CZ2 CH2 doub Y N 315 TRP CZ2 HZ2 sing N N 316 TRP CZ3 CH2 sing Y N 317 TRP CZ3 HZ3 sing N N 318 TRP CH2 HH2 sing N N 319 TRP OXT HXT sing N N 320 TYR N CA sing N N 321 TYR N H sing N N 322 TYR N H2 sing N N 323 TYR CA C sing N N 324 TYR CA CB sing N N 325 TYR CA HA sing N N 326 TYR C O doub N N 327 TYR C OXT sing N N 328 TYR CB CG sing N N 329 TYR CB HB2 sing N N 330 TYR CB HB3 sing N N 331 TYR CG CD1 doub Y N 332 TYR CG CD2 sing Y N 333 TYR CD1 CE1 sing Y N 334 TYR CD1 HD1 sing N N 335 TYR CD2 CE2 doub Y N 336 TYR CD2 HD2 sing N N 337 TYR CE1 CZ doub Y N 338 TYR CE1 HE1 sing N N 339 TYR CE2 CZ sing Y N 340 TYR CE2 HE2 sing N N 341 TYR CZ OH sing N N 342 TYR OH HH sing N N 343 TYR OXT HXT sing N N 344 VAL N CA sing N N 345 VAL N H sing N N 346 VAL N H2 sing N N 347 VAL CA C sing N N 348 VAL CA CB sing N N 349 VAL CA HA sing N N 350 VAL C O doub N N 351 VAL C OXT sing N N 352 VAL CB CG1 sing N N 353 VAL CB CG2 sing N N 354 VAL CB HB sing N N 355 VAL CG1 HG11 sing N N 356 VAL CG1 HG12 sing N N 357 VAL CG1 HG13 sing N N 358 VAL CG2 HG21 sing N N 359 VAL CG2 HG22 sing N N 360 VAL CG2 HG23 sing N N 361 VAL OXT HXT sing N N 362 # _atom_sites.entry_id 3I7M _atom_sites.fract_transf_matrix[1][1] 0.018564 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004742 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019622 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.020940 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O SE # loop_