data_3I99 # _entry.id 3I99 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3I99 RCSB RCSB054124 WWPDB D_1000054124 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id IDP01372 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3I99 _pdbx_database_status.recvd_initial_deposition_date 2009-07-10 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Zhang, R.' 1 'Gu, M.' 2 'Peterson, S.' 3 'Anderson, W.' 4 'Joachimiak, A.' 5 'Center for Structural Genomics of Infectious Diseases (CSGID)' 6 # _citation.id primary _citation.title 'The crystal structure of the UDP-N-acetylenolpyruvoylglucosamine reductase from the Vibrio cholerae O1 biovar Tor' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Zhang, R.' 1 primary 'Gu, M.' 2 primary 'Peterson, S.' 3 primary 'Anderson, W.' 4 primary 'Joachimiak, A.' 5 # _cell.entry_id 3I99 _cell.length_a 84.334 _cell.length_b 84.334 _cell.length_c 53.335 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3I99 _symmetry.space_group_name_H-M 'P 43' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'UDP-N-acetylenolpyruvoylglucosamine reductase' 39811.996 1 1.1.1.158 ? ? ? 2 non-polymer syn 'FLAVIN-ADENINE DINUCLEOTIDE' 785.550 1 ? ? ? ? 3 non-polymer syn 'PHOSPHATE ION' 94.971 2 ? ? ? ? 4 water nat water 18.015 114 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)ASLSYPKTT(MSE)QIQLGANLKPYHTFGIEQLAAQLVVAESIDDLKALYCSAEWASLPKLIIGKGSN(MSE)LF TCHYTG(MSE)IVVNRLNGIEHQQDDDYHRLHVAGGEDWPSLVSWCVEQGIGGLENLALIPGCAGSAPIQNIGAYGVEFK DVCDYVEYLCLETGTVKRLT(MSE)EECQFGYRDSIFKHQLYQKAVVTAVGLKFAKAWQPIIQYGPLKDLSSDCAIHDVY QRVCATR(MSE)EKLPDPAV(MSE)GNAGSFFKNPVISQQAFARLQIEHPDVVAYPAEQGVKVAAGWLIDQAGLKGHQIG GAKVHPKQALVIVNTGDASAQDVL(MSE)LAADIQQRVFNCYGIELEHEVRFIGESEETNLKQW(MSE)SEQA ; _entity_poly.pdbx_seq_one_letter_code_can ;MASLSYPKTTMQIQLGANLKPYHTFGIEQLAAQLVVAESIDDLKALYCSAEWASLPKLIIGKGSNMLFTCHYTGMIVVNR LNGIEHQQDDDYHRLHVAGGEDWPSLVSWCVEQGIGGLENLALIPGCAGSAPIQNIGAYGVEFKDVCDYVEYLCLETGTV KRLTMEECQFGYRDSIFKHQLYQKAVVTAVGLKFAKAWQPIIQYGPLKDLSSDCAIHDVYQRVCATRMEKLPDPAVMGNA GSFFKNPVISQQAFARLQIEHPDVVAYPAEQGVKVAAGWLIDQAGLKGHQIGGAKVHPKQALVIVNTGDASAQDVLMLAA DIQQRVFNCYGIELEHEVRFIGESEETNLKQWMSEQA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier IDP01372 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 ALA n 1 3 SER n 1 4 LEU n 1 5 SER n 1 6 TYR n 1 7 PRO n 1 8 LYS n 1 9 THR n 1 10 THR n 1 11 MSE n 1 12 GLN n 1 13 ILE n 1 14 GLN n 1 15 LEU n 1 16 GLY n 1 17 ALA n 1 18 ASN n 1 19 LEU n 1 20 LYS n 1 21 PRO n 1 22 TYR n 1 23 HIS n 1 24 THR n 1 25 PHE n 1 26 GLY n 1 27 ILE n 1 28 GLU n 1 29 GLN n 1 30 LEU n 1 31 ALA n 1 32 ALA n 1 33 GLN n 1 34 LEU n 1 35 VAL n 1 36 VAL n 1 37 ALA n 1 38 GLU n 1 39 SER n 1 40 ILE n 1 41 ASP n 1 42 ASP n 1 43 LEU n 1 44 LYS n 1 45 ALA n 1 46 LEU n 1 47 TYR n 1 48 CYS n 1 49 SER n 1 50 ALA n 1 51 GLU n 1 52 TRP n 1 53 ALA n 1 54 SER n 1 55 LEU n 1 56 PRO n 1 57 LYS n 1 58 LEU n 1 59 ILE n 1 60 ILE n 1 61 GLY n 1 62 LYS n 1 63 GLY n 1 64 SER n 1 65 ASN n 1 66 MSE n 1 67 LEU n 1 68 PHE n 1 69 THR n 1 70 CYS n 1 71 HIS n 1 72 TYR n 1 73 THR n 1 74 GLY n 1 75 MSE n 1 76 ILE n 1 77 VAL n 1 78 VAL n 1 79 ASN n 1 80 ARG n 1 81 LEU n 1 82 ASN n 1 83 GLY n 1 84 ILE n 1 85 GLU n 1 86 HIS n 1 87 GLN n 1 88 GLN n 1 89 ASP n 1 90 ASP n 1 91 ASP n 1 92 TYR n 1 93 HIS n 1 94 ARG n 1 95 LEU n 1 96 HIS n 1 97 VAL n 1 98 ALA n 1 99 GLY n 1 100 GLY n 1 101 GLU n 1 102 ASP n 1 103 TRP n 1 104 PRO n 1 105 SER n 1 106 LEU n 1 107 VAL n 1 108 SER n 1 109 TRP n 1 110 CYS n 1 111 VAL n 1 112 GLU n 1 113 GLN n 1 114 GLY n 1 115 ILE n 1 116 GLY n 1 117 GLY n 1 118 LEU n 1 119 GLU n 1 120 ASN n 1 121 LEU n 1 122 ALA n 1 123 LEU n 1 124 ILE n 1 125 PRO n 1 126 GLY n 1 127 CYS n 1 128 ALA n 1 129 GLY n 1 130 SER n 1 131 ALA n 1 132 PRO n 1 133 ILE n 1 134 GLN n 1 135 ASN n 1 136 ILE n 1 137 GLY n 1 138 ALA n 1 139 TYR n 1 140 GLY n 1 141 VAL n 1 142 GLU n 1 143 PHE n 1 144 LYS n 1 145 ASP n 1 146 VAL n 1 147 CYS n 1 148 ASP n 1 149 TYR n 1 150 VAL n 1 151 GLU n 1 152 TYR n 1 153 LEU n 1 154 CYS n 1 155 LEU n 1 156 GLU n 1 157 THR n 1 158 GLY n 1 159 THR n 1 160 VAL n 1 161 LYS n 1 162 ARG n 1 163 LEU n 1 164 THR n 1 165 MSE n 1 166 GLU n 1 167 GLU n 1 168 CYS n 1 169 GLN n 1 170 PHE n 1 171 GLY n 1 172 TYR n 1 173 ARG n 1 174 ASP n 1 175 SER n 1 176 ILE n 1 177 PHE n 1 178 LYS n 1 179 HIS n 1 180 GLN n 1 181 LEU n 1 182 TYR n 1 183 GLN n 1 184 LYS n 1 185 ALA n 1 186 VAL n 1 187 VAL n 1 188 THR n 1 189 ALA n 1 190 VAL n 1 191 GLY n 1 192 LEU n 1 193 LYS n 1 194 PHE n 1 195 ALA n 1 196 LYS n 1 197 ALA n 1 198 TRP n 1 199 GLN n 1 200 PRO n 1 201 ILE n 1 202 ILE n 1 203 GLN n 1 204 TYR n 1 205 GLY n 1 206 PRO n 1 207 LEU n 1 208 LYS n 1 209 ASP n 1 210 LEU n 1 211 SER n 1 212 SER n 1 213 ASP n 1 214 CYS n 1 215 ALA n 1 216 ILE n 1 217 HIS n 1 218 ASP n 1 219 VAL n 1 220 TYR n 1 221 GLN n 1 222 ARG n 1 223 VAL n 1 224 CYS n 1 225 ALA n 1 226 THR n 1 227 ARG n 1 228 MSE n 1 229 GLU n 1 230 LYS n 1 231 LEU n 1 232 PRO n 1 233 ASP n 1 234 PRO n 1 235 ALA n 1 236 VAL n 1 237 MSE n 1 238 GLY n 1 239 ASN n 1 240 ALA n 1 241 GLY n 1 242 SER n 1 243 PHE n 1 244 PHE n 1 245 LYS n 1 246 ASN n 1 247 PRO n 1 248 VAL n 1 249 ILE n 1 250 SER n 1 251 GLN n 1 252 GLN n 1 253 ALA n 1 254 PHE n 1 255 ALA n 1 256 ARG n 1 257 LEU n 1 258 GLN n 1 259 ILE n 1 260 GLU n 1 261 HIS n 1 262 PRO n 1 263 ASP n 1 264 VAL n 1 265 VAL n 1 266 ALA n 1 267 TYR n 1 268 PRO n 1 269 ALA n 1 270 GLU n 1 271 GLN n 1 272 GLY n 1 273 VAL n 1 274 LYS n 1 275 VAL n 1 276 ALA n 1 277 ALA n 1 278 GLY n 1 279 TRP n 1 280 LEU n 1 281 ILE n 1 282 ASP n 1 283 GLN n 1 284 ALA n 1 285 GLY n 1 286 LEU n 1 287 LYS n 1 288 GLY n 1 289 HIS n 1 290 GLN n 1 291 ILE n 1 292 GLY n 1 293 GLY n 1 294 ALA n 1 295 LYS n 1 296 VAL n 1 297 HIS n 1 298 PRO n 1 299 LYS n 1 300 GLN n 1 301 ALA n 1 302 LEU n 1 303 VAL n 1 304 ILE n 1 305 VAL n 1 306 ASN n 1 307 THR n 1 308 GLY n 1 309 ASP n 1 310 ALA n 1 311 SER n 1 312 ALA n 1 313 GLN n 1 314 ASP n 1 315 VAL n 1 316 LEU n 1 317 MSE n 1 318 LEU n 1 319 ALA n 1 320 ALA n 1 321 ASP n 1 322 ILE n 1 323 GLN n 1 324 GLN n 1 325 ARG n 1 326 VAL n 1 327 PHE n 1 328 ASN n 1 329 CYS n 1 330 TYR n 1 331 GLY n 1 332 ILE n 1 333 GLU n 1 334 LEU n 1 335 GLU n 1 336 HIS n 1 337 GLU n 1 338 VAL n 1 339 ARG n 1 340 PHE n 1 341 ILE n 1 342 GLY n 1 343 GLU n 1 344 SER n 1 345 GLU n 1 346 GLU n 1 347 THR n 1 348 ASN n 1 349 LEU n 1 350 LYS n 1 351 GLN n 1 352 TRP n 1 353 MSE n 1 354 SER n 1 355 GLU n 1 356 GLN n 1 357 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'gi: 15640345, murB, VCM66_0302' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain N16961 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Vibrio cholerae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 243277 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG7 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code C3LQS2_VIBCM _struct_ref.pdbx_db_accession C3LQS2 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MASLSYPKTTMQIQLGANLKPYHTFGIEQLAAQLVVAESIDDLKALYCSAEWASLPKLIIGKGSNMLFTCHYTGMIVVNR LNGIEHQQDDDYHRLHVAGGEDWPSLVSWCVEQGIGGLENLALIPGCAGSAPIQNIGAYGVEFKDVCDYVEYLCLETGTV KRLTMEECQFGYRDSIFKHQLYQKAVVTAVGLKFAKAWQPIIQYGPLKDLSSDCAIHDVYQRVCATRMEKLPDPAVMGNA GSFFKNPVISQQAFARLQIEHPDVVAYPAEQGVKVAAGWLIDQAGLKGHQIGGAKVHPKQALVIVNTGDASAQDVLMLAA DIQQRVFNCYGIELEHEVRFIGESEETNLKQWMSEQA ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3I99 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 357 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession C3LQS2 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 357 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 357 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FAD non-polymer . 'FLAVIN-ADENINE DINUCLEOTIDE' ? 'C27 H33 N9 O15 P2' 785.550 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3I99 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.38 _exptl_crystal.density_percent_sol 48.36 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.2 _exptl_crystal_grow.pdbx_details '0.1M Phosphate-citrate, 1.6M NaH2PO4/0.4M K2HPO4, pH 4.2, VAPOR DIFFUSION, SITTING DROP, temperature 289K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2009-03-09 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 channel' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9794 1.0 2 0.9796 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.9794, 0.9796' # _reflns.entry_id 3I99 _reflns.observed_criterion_sigma_I 2 _reflns.observed_criterion_sigma_F 2 _reflns.d_resolution_low 99.33 _reflns.d_resolution_high 2.2 _reflns.number_obs 18139 _reflns.number_all 18261 _reflns.percent_possible_obs 99.33 _reflns.pdbx_Rmerge_I_obs 0.138 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 18.48 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.2 _reflns_shell.d_res_low 2.257 _reflns_shell.percent_possible_all 96.82 _reflns_shell.Rmerge_I_obs 0.75 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.0 _reflns_shell.pdbx_redundancy 5.2 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1414 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3I99 _refine.ls_number_reflns_obs 18139 _refine.ls_number_reflns_all 0 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 45.08 _refine.ls_d_res_high 2.20 _refine.ls_percent_reflns_obs 99.33 _refine.ls_R_factor_obs 0.17087 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.16794 _refine.ls_R_factor_R_free 0.22334 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 984 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.967 _refine.correlation_coeff_Fo_to_Fc_free 0.946 _refine.B_iso_mean 27.477 _refine.aniso_B[1][1] -0.12 _refine.aniso_B[2][2] -0.12 _refine.aniso_B[3][3] 0.24 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.241 _refine.pdbx_overall_ESU_R_Free 0.197 _refine.overall_SU_ML 0.154 _refine.overall_SU_B 13.893 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2626 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 63 _refine_hist.number_atoms_solvent 114 _refine_hist.number_atoms_total 2803 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 45.08 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.022 0.022 ? 2749 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.041 1.975 ? 3742 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.052 5.000 ? 339 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 37.472 25.285 ? 123 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 17.802 15.000 ? 445 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 14.571 15.000 ? 9 'X-RAY DIFFRACTION' ? r_chiral_restr 0.152 0.200 ? 410 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.009 0.021 ? 2074 'X-RAY DIFFRACTION' ? r_mcbond_it 1.038 1.500 ? 1682 'X-RAY DIFFRACTION' ? r_mcangle_it 1.961 2.000 ? 2696 'X-RAY DIFFRACTION' ? r_scbond_it 3.313 3.000 ? 1067 'X-RAY DIFFRACTION' ? r_scangle_it 5.279 4.500 ? 1046 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.200 _refine_ls_shell.d_res_low 2.257 _refine_ls_shell.number_reflns_R_work 1312 _refine_ls_shell.R_factor_R_work 0.249 _refine_ls_shell.percent_reflns_obs 96.82 _refine_ls_shell.R_factor_R_free 0.300 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 57 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 1369 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3I99 _struct.title 'The crystal structure of the UDP-N-acetylenolpyruvoylglucosamine reductase from the Vibrio cholerae O1 biovar Tor' _struct.pdbx_descriptor 'UDP-N-acetylenolpyruvoylglucosamine reductase (E.C.1.1.1.158)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3I99 _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.text ;UDP-N-acetylenolpyruvoylglucosamine reductase, murB, cell envelope, Oxidoreductase, Structural Genomics, Center for Structural Genomics of Infectious Diseases, CSGID ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 20 ? HIS A 23 ? LYS A 20 HIS A 23 5 ? 4 HELX_P HELX_P2 2 SER A 39 ? CYS A 48 ? SER A 39 CYS A 48 1 ? 10 HELX_P HELX_P3 3 ASP A 102 ? GLN A 113 ? ASP A 102 GLN A 113 1 ? 12 HELX_P HELX_P4 4 LEU A 118 ? ALA A 122 ? LEU A 118 ALA A 122 5 ? 5 HELX_P HELX_P5 5 CYS A 127 ? ALA A 131 ? CYS A 127 ALA A 131 5 ? 5 HELX_P HELX_P6 6 GLU A 166 ? GLN A 169 ? GLU A 166 GLN A 169 5 ? 4 HELX_P HELX_P7 7 SER A 175 ? HIS A 179 ? SER A 175 HIS A 179 5 ? 5 HELX_P HELX_P8 8 TYR A 204 ? LEU A 210 ? TYR A 204 LEU A 210 5 ? 7 HELX_P HELX_P9 9 ALA A 215 ? LEU A 231 ? ALA A 215 LEU A 231 1 ? 17 HELX_P HELX_P10 10 SER A 250 ? HIS A 261 ? SER A 250 HIS A 261 1 ? 12 HELX_P HELX_P11 11 ALA A 276 ? ALA A 284 ? ALA A 276 ALA A 284 1 ? 9 HELX_P HELX_P12 12 SER A 311 ? GLY A 331 ? SER A 311 GLY A 331 1 ? 21 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A THR 10 C ? ? ? 1_555 A MSE 11 N ? ? A THR 10 A MSE 11 1_555 ? ? ? ? ? ? ? 1.339 ? covale2 covale ? ? A MSE 11 C ? ? ? 1_555 A GLN 12 N ? ? A MSE 11 A GLN 12 1_555 ? ? ? ? ? ? ? 1.337 ? covale3 covale ? ? A ASN 65 C ? ? ? 1_555 A MSE 66 N ? ? A ASN 65 A MSE 66 1_555 ? ? ? ? ? ? ? 1.319 ? covale4 covale ? ? A MSE 66 C ? ? ? 1_555 A LEU 67 N ? ? A MSE 66 A LEU 67 1_555 ? ? ? ? ? ? ? 1.328 ? covale5 covale ? ? A GLY 74 C ? ? ? 1_555 A MSE 75 N ? ? A GLY 74 A MSE 75 1_555 ? ? ? ? ? ? ? 1.320 ? covale6 covale ? ? A MSE 75 C ? ? ? 1_555 A ILE 76 N ? ? A MSE 75 A ILE 76 1_555 ? ? ? ? ? ? ? 1.317 ? covale7 covale ? ? A THR 164 C ? ? ? 1_555 A MSE 165 N ? ? A THR 164 A MSE 165 1_555 ? ? ? ? ? ? ? 1.331 ? covale8 covale ? ? A MSE 165 C ? ? ? 1_555 A GLU 166 N ? ? A MSE 165 A GLU 166 1_555 ? ? ? ? ? ? ? 1.346 ? covale9 covale ? ? A ARG 227 C ? ? ? 1_555 A MSE 228 N ? ? A ARG 227 A MSE 228 1_555 ? ? ? ? ? ? ? 1.324 ? covale10 covale ? ? A MSE 228 C ? ? ? 1_555 A GLU 229 N ? ? A MSE 228 A GLU 229 1_555 ? ? ? ? ? ? ? 1.336 ? covale11 covale ? ? A VAL 236 C ? ? ? 1_555 A MSE 237 N ? ? A VAL 236 A MSE 237 1_555 ? ? ? ? ? ? ? 1.319 ? covale12 covale ? ? A MSE 237 C ? ? ? 1_555 A GLY 238 N ? ? A MSE 237 A GLY 238 1_555 ? ? ? ? ? ? ? 1.334 ? covale13 covale ? ? A LEU 316 C ? ? ? 1_555 A MSE 317 N ? ? A LEU 316 A MSE 317 1_555 ? ? ? ? ? ? ? 1.322 ? covale14 covale ? ? A MSE 317 C ? ? ? 1_555 A LEU 318 N ? ? A MSE 317 A LEU 318 1_555 ? ? ? ? ? ? ? 1.328 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 2 ? C ? 5 ? D ? 2 ? E ? 4 ? F ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel B 1 2 ? parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel D 1 2 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 14 ? ASN A 18 ? GLN A 14 ASN A 18 A 2 LEU A 30 ? ALA A 37 ? LEU A 30 ALA A 37 A 3 TYR A 72 ? ASN A 79 ? TYR A 72 ASN A 79 A 4 LYS A 57 ? ILE A 60 ? LYS A 57 ILE A 60 B 1 MSE A 66 ? PHE A 68 ? MSE A 66 PHE A 68 B 2 ARG A 339 ? ILE A 341 ? ARG A 339 ILE A 341 C 1 ILE A 84 ? GLN A 88 ? ILE A 84 GLN A 88 C 2 TYR A 92 ? ALA A 98 ? TYR A 92 ALA A 98 C 3 ALA A 185 ? ALA A 195 ? ALA A 185 ALA A 195 C 4 CYS A 147 ? CYS A 154 ? CYS A 147 CYS A 154 C 5 VAL A 160 ? THR A 164 ? VAL A 160 THR A 164 D 1 GLY A 137 ? ALA A 138 ? GLY A 137 ALA A 138 D 2 VAL A 141 ? GLU A 142 ? VAL A 141 GLU A 142 E 1 ASN A 239 ? SER A 242 ? ASN A 239 SER A 242 E 2 VAL A 303 ? ASN A 306 ? VAL A 303 ASN A 306 E 3 ALA A 294 ? VAL A 296 ? ALA A 294 VAL A 296 E 4 GLN A 290 ? ILE A 291 ? GLN A 290 ILE A 291 F 1 VAL A 248 ? ILE A 249 ? VAL A 248 ILE A 249 F 2 VAL A 273 ? VAL A 275 ? VAL A 273 VAL A 275 F 3 ALA A 266 ? TYR A 267 ? ALA A 266 TYR A 267 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLN A 14 ? N GLN A 14 O LEU A 34 ? O LEU A 34 A 2 3 N ALA A 32 ? N ALA A 32 O TYR A 72 ? O TYR A 72 A 3 4 O VAL A 77 ? O VAL A 77 N LEU A 58 ? N LEU A 58 B 1 2 N LEU A 67 ? N LEU A 67 O ILE A 341 ? O ILE A 341 C 1 2 N GLN A 87 ? N GLN A 87 O ARG A 94 ? O ARG A 94 C 2 3 N VAL A 97 ? N VAL A 97 O VAL A 190 ? O VAL A 190 C 3 4 O GLY A 191 ? O GLY A 191 N ASP A 148 ? N ASP A 148 C 4 5 N TYR A 152 ? N TYR A 152 O LYS A 161 ? O LYS A 161 D 1 2 N ALA A 138 ? N ALA A 138 O VAL A 141 ? O VAL A 141 E 1 2 N GLY A 241 ? N GLY A 241 O ILE A 304 ? O ILE A 304 E 2 3 O VAL A 305 ? O VAL A 305 N LYS A 295 ? N LYS A 295 E 3 4 O ALA A 294 ? O ALA A 294 N ILE A 291 ? N ILE A 291 F 1 2 N ILE A 249 ? N ILE A 249 O VAL A 273 ? O VAL A 273 F 2 3 O LYS A 274 ? O LYS A 274 N TYR A 267 ? N TYR A 267 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 34 'BINDING SITE FOR RESIDUE FAD A 358' AC2 Software ? ? ? ? 9 'BINDING SITE FOR RESIDUE PO4 A 359' AC3 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE PO4 A 360' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 34 THR A 24 ? THR A 24 . ? 1_555 ? 2 AC1 34 ILE A 59 ? ILE A 59 . ? 1_555 ? 3 AC1 34 ILE A 60 ? ILE A 60 . ? 1_555 ? 4 AC1 34 GLY A 61 ? GLY A 61 . ? 1_555 ? 5 AC1 34 LYS A 62 ? LYS A 62 . ? 1_555 ? 6 AC1 34 GLY A 63 ? GLY A 63 . ? 1_555 ? 7 AC1 34 SER A 64 ? SER A 64 . ? 1_555 ? 8 AC1 34 ASN A 65 ? ASN A 65 . ? 1_555 ? 9 AC1 34 MSE A 66 ? MSE A 66 . ? 1_555 ? 10 AC1 34 ASN A 79 ? ASN A 79 . ? 1_555 ? 11 AC1 34 ILE A 124 ? ILE A 124 . ? 1_555 ? 12 AC1 34 PRO A 125 ? PRO A 125 . ? 1_555 ? 13 AC1 34 GLY A 126 ? GLY A 126 . ? 1_555 ? 14 AC1 34 CYS A 127 ? CYS A 127 . ? 1_555 ? 15 AC1 34 SER A 130 ? SER A 130 . ? 1_555 ? 16 AC1 34 ILE A 133 ? ILE A 133 . ? 1_555 ? 17 AC1 34 ILE A 136 ? ILE A 136 . ? 1_555 ? 18 AC1 34 GLY A 137 ? GLY A 137 . ? 1_555 ? 19 AC1 34 ARG A 173 ? ARG A 173 . ? 1_555 ? 20 AC1 34 ALA A 185 ? ALA A 185 . ? 1_555 ? 21 AC1 34 VAL A 186 ? VAL A 186 . ? 1_555 ? 22 AC1 34 VAL A 187 ? VAL A 187 . ? 1_555 ? 23 AC1 34 ARG A 227 ? ARG A 227 . ? 1_555 ? 24 AC1 34 ASN A 239 ? ASN A 239 . ? 1_555 ? 25 AC1 34 ALA A 240 ? ALA A 240 . ? 1_555 ? 26 AC1 34 GLY A 241 ? GLY A 241 . ? 1_555 ? 27 AC1 34 ARG A 339 ? ARG A 339 . ? 1_555 ? 28 AC1 34 HOH E . ? HOH A 366 . ? 1_555 ? 29 AC1 34 HOH E . ? HOH A 375 . ? 1_555 ? 30 AC1 34 HOH E . ? HOH A 396 . ? 1_555 ? 31 AC1 34 HOH E . ? HOH A 405 . ? 1_555 ? 32 AC1 34 HOH E . ? HOH A 407 . ? 1_555 ? 33 AC1 34 HOH E . ? HOH A 455 . ? 1_555 ? 34 AC1 34 HOH E . ? HOH A 457 . ? 1_555 ? 35 AC2 9 TYR A 172 ? TYR A 172 . ? 1_555 ? 36 AC2 9 ARG A 173 ? ARG A 173 . ? 1_555 ? 37 AC2 9 SER A 242 ? SER A 242 . ? 1_555 ? 38 AC2 9 PHE A 244 ? PHE A 244 . ? 1_555 ? 39 AC2 9 LYS A 245 ? LYS A 245 . ? 1_555 ? 40 AC2 9 ASN A 246 ? ASN A 246 . ? 1_555 ? 41 AC2 9 LEU A 302 ? LEU A 302 . ? 1_555 ? 42 AC2 9 GLU A 337 ? GLU A 337 . ? 1_555 ? 43 AC2 9 HOH E . ? HOH A 401 . ? 1_555 ? 44 AC3 4 THR A 10 ? THR A 10 . ? 1_555 ? 45 AC3 4 GLU A 38 ? GLU A 38 . ? 1_555 ? 46 AC3 4 SER A 39 ? SER A 39 . ? 1_555 ? 47 AC3 4 ASP A 42 ? ASP A 42 . ? 1_555 ? # _database_PDB_matrix.entry_id 3I99 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3I99 _atom_sites.fract_transf_matrix[1][1] 0.011858 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011858 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018749 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 1 ? ? ? A . n A 1 2 ALA 2 2 ? ? ? A . n A 1 3 SER 3 3 ? ? ? A . n A 1 4 LEU 4 4 ? ? ? A . n A 1 5 SER 5 5 ? ? ? A . n A 1 6 TYR 6 6 ? ? ? A . n A 1 7 PRO 7 7 ? ? ? A . n A 1 8 LYS 8 8 ? ? ? A . n A 1 9 THR 9 9 9 THR THR A . n A 1 10 THR 10 10 10 THR THR A . n A 1 11 MSE 11 11 11 MSE MSE A . n A 1 12 GLN 12 12 12 GLN GLN A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 GLN 14 14 14 GLN GLN A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 ALA 17 17 17 ALA ALA A . n A 1 18 ASN 18 18 18 ASN ASN A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 LYS 20 20 20 LYS LYS A . n A 1 21 PRO 21 21 21 PRO PRO A . n A 1 22 TYR 22 22 22 TYR TYR A . n A 1 23 HIS 23 23 23 HIS HIS A . n A 1 24 THR 24 24 24 THR THR A . n A 1 25 PHE 25 25 25 PHE PHE A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 ILE 27 27 27 ILE ILE A . n A 1 28 GLU 28 28 28 GLU GLU A . n A 1 29 GLN 29 29 29 GLN GLN A . n A 1 30 LEU 30 30 30 LEU LEU A . n A 1 31 ALA 31 31 31 ALA ALA A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 GLN 33 33 33 GLN GLN A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 ALA 37 37 37 ALA ALA A . n A 1 38 GLU 38 38 38 GLU GLU A . n A 1 39 SER 39 39 39 SER SER A . n A 1 40 ILE 40 40 40 ILE ILE A . n A 1 41 ASP 41 41 41 ASP ASP A . n A 1 42 ASP 42 42 42 ASP ASP A . n A 1 43 LEU 43 43 43 LEU LEU A . n A 1 44 LYS 44 44 44 LYS LYS A . n A 1 45 ALA 45 45 45 ALA ALA A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 TYR 47 47 47 TYR TYR A . n A 1 48 CYS 48 48 48 CYS CYS A . n A 1 49 SER 49 49 49 SER SER A . n A 1 50 ALA 50 50 50 ALA ALA A . n A 1 51 GLU 51 51 51 GLU GLU A . n A 1 52 TRP 52 52 52 TRP TRP A . n A 1 53 ALA 53 53 53 ALA ALA A . n A 1 54 SER 54 54 54 SER SER A . n A 1 55 LEU 55 55 55 LEU LEU A . n A 1 56 PRO 56 56 56 PRO PRO A . n A 1 57 LYS 57 57 57 LYS LYS A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 ILE 59 59 59 ILE ILE A . n A 1 60 ILE 60 60 60 ILE ILE A . n A 1 61 GLY 61 61 61 GLY GLY A . n A 1 62 LYS 62 62 62 LYS LYS A . n A 1 63 GLY 63 63 63 GLY GLY A . n A 1 64 SER 64 64 64 SER SER A . n A 1 65 ASN 65 65 65 ASN ASN A . n A 1 66 MSE 66 66 66 MSE MSE A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 PHE 68 68 68 PHE PHE A . n A 1 69 THR 69 69 69 THR THR A . n A 1 70 CYS 70 70 70 CYS CYS A . n A 1 71 HIS 71 71 71 HIS HIS A . n A 1 72 TYR 72 72 72 TYR TYR A . n A 1 73 THR 73 73 73 THR THR A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 MSE 75 75 75 MSE MSE A . n A 1 76 ILE 76 76 76 ILE ILE A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 VAL 78 78 78 VAL VAL A . n A 1 79 ASN 79 79 79 ASN ASN A . n A 1 80 ARG 80 80 80 ARG ARG A . n A 1 81 LEU 81 81 81 LEU LEU A . n A 1 82 ASN 82 82 82 ASN ASN A . n A 1 83 GLY 83 83 83 GLY GLY A . n A 1 84 ILE 84 84 84 ILE ILE A . n A 1 85 GLU 85 85 85 GLU GLU A . n A 1 86 HIS 86 86 86 HIS HIS A . n A 1 87 GLN 87 87 87 GLN GLN A . n A 1 88 GLN 88 88 88 GLN GLN A . n A 1 89 ASP 89 89 89 ASP ASP A . n A 1 90 ASP 90 90 90 ASP ASP A . n A 1 91 ASP 91 91 91 ASP ASP A . n A 1 92 TYR 92 92 92 TYR TYR A . n A 1 93 HIS 93 93 93 HIS HIS A . n A 1 94 ARG 94 94 94 ARG ARG A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 HIS 96 96 96 HIS HIS A . n A 1 97 VAL 97 97 97 VAL VAL A . n A 1 98 ALA 98 98 98 ALA ALA A . n A 1 99 GLY 99 99 99 GLY GLY A . n A 1 100 GLY 100 100 100 GLY GLY A . n A 1 101 GLU 101 101 101 GLU GLU A . n A 1 102 ASP 102 102 102 ASP ASP A . n A 1 103 TRP 103 103 103 TRP TRP A . n A 1 104 PRO 104 104 104 PRO PRO A . n A 1 105 SER 105 105 105 SER SER A . n A 1 106 LEU 106 106 106 LEU LEU A . n A 1 107 VAL 107 107 107 VAL VAL A . n A 1 108 SER 108 108 108 SER SER A . n A 1 109 TRP 109 109 109 TRP TRP A . n A 1 110 CYS 110 110 110 CYS CYS A . n A 1 111 VAL 111 111 111 VAL VAL A . n A 1 112 GLU 112 112 112 GLU GLU A . n A 1 113 GLN 113 113 113 GLN GLN A . n A 1 114 GLY 114 114 114 GLY GLY A . n A 1 115 ILE 115 115 115 ILE ILE A . n A 1 116 GLY 116 116 116 GLY GLY A . n A 1 117 GLY 117 117 117 GLY GLY A . n A 1 118 LEU 118 118 118 LEU LEU A . n A 1 119 GLU 119 119 119 GLU GLU A . n A 1 120 ASN 120 120 120 ASN ASN A . n A 1 121 LEU 121 121 121 LEU LEU A . n A 1 122 ALA 122 122 122 ALA ALA A . n A 1 123 LEU 123 123 123 LEU LEU A . n A 1 124 ILE 124 124 124 ILE ILE A . n A 1 125 PRO 125 125 125 PRO PRO A . n A 1 126 GLY 126 126 126 GLY GLY A . n A 1 127 CYS 127 127 127 CYS CYS A . n A 1 128 ALA 128 128 128 ALA ALA A . n A 1 129 GLY 129 129 129 GLY GLY A . n A 1 130 SER 130 130 130 SER SER A . n A 1 131 ALA 131 131 131 ALA ALA A . n A 1 132 PRO 132 132 132 PRO PRO A . n A 1 133 ILE 133 133 133 ILE ILE A . n A 1 134 GLN 134 134 134 GLN GLN A . n A 1 135 ASN 135 135 135 ASN ASN A . n A 1 136 ILE 136 136 136 ILE ILE A . n A 1 137 GLY 137 137 137 GLY GLY A . n A 1 138 ALA 138 138 138 ALA ALA A . n A 1 139 TYR 139 139 139 TYR TYR A . n A 1 140 GLY 140 140 140 GLY GLY A . n A 1 141 VAL 141 141 141 VAL VAL A . n A 1 142 GLU 142 142 142 GLU GLU A . n A 1 143 PHE 143 143 143 PHE PHE A . n A 1 144 LYS 144 144 144 LYS LYS A . n A 1 145 ASP 145 145 145 ASP ASP A . n A 1 146 VAL 146 146 146 VAL VAL A . n A 1 147 CYS 147 147 147 CYS CYS A . n A 1 148 ASP 148 148 148 ASP ASP A . n A 1 149 TYR 149 149 149 TYR TYR A . n A 1 150 VAL 150 150 150 VAL VAL A . n A 1 151 GLU 151 151 151 GLU GLU A . n A 1 152 TYR 152 152 152 TYR TYR A . n A 1 153 LEU 153 153 153 LEU LEU A . n A 1 154 CYS 154 154 154 CYS CYS A . n A 1 155 LEU 155 155 155 LEU LEU A . n A 1 156 GLU 156 156 156 GLU GLU A . n A 1 157 THR 157 157 157 THR THR A . n A 1 158 GLY 158 158 158 GLY GLY A . n A 1 159 THR 159 159 159 THR THR A . n A 1 160 VAL 160 160 160 VAL VAL A . n A 1 161 LYS 161 161 161 LYS LYS A . n A 1 162 ARG 162 162 162 ARG ARG A . n A 1 163 LEU 163 163 163 LEU LEU A . n A 1 164 THR 164 164 164 THR THR A . n A 1 165 MSE 165 165 165 MSE MSE A . n A 1 166 GLU 166 166 166 GLU GLU A . n A 1 167 GLU 167 167 167 GLU GLU A . n A 1 168 CYS 168 168 168 CYS CYS A . n A 1 169 GLN 169 169 169 GLN GLN A . n A 1 170 PHE 170 170 170 PHE PHE A . n A 1 171 GLY 171 171 171 GLY GLY A . n A 1 172 TYR 172 172 172 TYR TYR A . n A 1 173 ARG 173 173 173 ARG ARG A . n A 1 174 ASP 174 174 174 ASP ASP A . n A 1 175 SER 175 175 175 SER SER A . n A 1 176 ILE 176 176 176 ILE ILE A . n A 1 177 PHE 177 177 177 PHE PHE A . n A 1 178 LYS 178 178 178 LYS LYS A . n A 1 179 HIS 179 179 179 HIS HIS A . n A 1 180 GLN 180 180 180 GLN GLN A . n A 1 181 LEU 181 181 181 LEU LEU A . n A 1 182 TYR 182 182 182 TYR TYR A . n A 1 183 GLN 183 183 183 GLN GLN A . n A 1 184 LYS 184 184 184 LYS LYS A . n A 1 185 ALA 185 185 185 ALA ALA A . n A 1 186 VAL 186 186 186 VAL VAL A . n A 1 187 VAL 187 187 187 VAL VAL A . n A 1 188 THR 188 188 188 THR THR A . n A 1 189 ALA 189 189 189 ALA ALA A . n A 1 190 VAL 190 190 190 VAL VAL A . n A 1 191 GLY 191 191 191 GLY GLY A . n A 1 192 LEU 192 192 192 LEU LEU A . n A 1 193 LYS 193 193 193 LYS LYS A . n A 1 194 PHE 194 194 194 PHE PHE A . n A 1 195 ALA 195 195 195 ALA ALA A . n A 1 196 LYS 196 196 196 LYS LYS A . n A 1 197 ALA 197 197 197 ALA ALA A . n A 1 198 TRP 198 198 198 TRP TRP A . n A 1 199 GLN 199 199 199 GLN GLN A . n A 1 200 PRO 200 200 200 PRO PRO A . n A 1 201 ILE 201 201 201 ILE ILE A . n A 1 202 ILE 202 202 202 ILE ILE A . n A 1 203 GLN 203 203 203 GLN GLN A . n A 1 204 TYR 204 204 204 TYR TYR A . n A 1 205 GLY 205 205 205 GLY GLY A . n A 1 206 PRO 206 206 206 PRO PRO A . n A 1 207 LEU 207 207 207 LEU LEU A . n A 1 208 LYS 208 208 208 LYS LYS A . n A 1 209 ASP 209 209 209 ASP ASP A . n A 1 210 LEU 210 210 210 LEU LEU A . n A 1 211 SER 211 211 211 SER SER A . n A 1 212 SER 212 212 212 SER SER A . n A 1 213 ASP 213 213 213 ASP ASP A . n A 1 214 CYS 214 214 214 CYS CYS A . n A 1 215 ALA 215 215 215 ALA ALA A . n A 1 216 ILE 216 216 216 ILE ILE A . n A 1 217 HIS 217 217 217 HIS HIS A . n A 1 218 ASP 218 218 218 ASP ASP A . n A 1 219 VAL 219 219 219 VAL VAL A . n A 1 220 TYR 220 220 220 TYR TYR A . n A 1 221 GLN 221 221 221 GLN GLN A . n A 1 222 ARG 222 222 222 ARG ARG A . n A 1 223 VAL 223 223 223 VAL VAL A . n A 1 224 CYS 224 224 224 CYS CYS A . n A 1 225 ALA 225 225 225 ALA ALA A . n A 1 226 THR 226 226 226 THR THR A . n A 1 227 ARG 227 227 227 ARG ARG A . n A 1 228 MSE 228 228 228 MSE MSE A . n A 1 229 GLU 229 229 229 GLU GLU A . n A 1 230 LYS 230 230 230 LYS LYS A . n A 1 231 LEU 231 231 231 LEU LEU A . n A 1 232 PRO 232 232 232 PRO PRO A . n A 1 233 ASP 233 233 233 ASP ASP A . n A 1 234 PRO 234 234 234 PRO PRO A . n A 1 235 ALA 235 235 235 ALA ALA A . n A 1 236 VAL 236 236 236 VAL VAL A . n A 1 237 MSE 237 237 237 MSE MSE A . n A 1 238 GLY 238 238 238 GLY GLY A . n A 1 239 ASN 239 239 239 ASN ASN A . n A 1 240 ALA 240 240 240 ALA ALA A . n A 1 241 GLY 241 241 241 GLY GLY A . n A 1 242 SER 242 242 242 SER SER A . n A 1 243 PHE 243 243 243 PHE PHE A . n A 1 244 PHE 244 244 244 PHE PHE A . n A 1 245 LYS 245 245 245 LYS LYS A . n A 1 246 ASN 246 246 246 ASN ASN A . n A 1 247 PRO 247 247 247 PRO PRO A . n A 1 248 VAL 248 248 248 VAL VAL A . n A 1 249 ILE 249 249 249 ILE ILE A . n A 1 250 SER 250 250 250 SER SER A . n A 1 251 GLN 251 251 251 GLN GLN A . n A 1 252 GLN 252 252 252 GLN GLN A . n A 1 253 ALA 253 253 253 ALA ALA A . n A 1 254 PHE 254 254 254 PHE PHE A . n A 1 255 ALA 255 255 255 ALA ALA A . n A 1 256 ARG 256 256 256 ARG ARG A . n A 1 257 LEU 257 257 257 LEU LEU A . n A 1 258 GLN 258 258 258 GLN GLN A . n A 1 259 ILE 259 259 259 ILE ILE A . n A 1 260 GLU 260 260 260 GLU GLU A . n A 1 261 HIS 261 261 261 HIS HIS A . n A 1 262 PRO 262 262 262 PRO PRO A . n A 1 263 ASP 263 263 263 ASP ASP A . n A 1 264 VAL 264 264 264 VAL VAL A . n A 1 265 VAL 265 265 265 VAL VAL A . n A 1 266 ALA 266 266 266 ALA ALA A . n A 1 267 TYR 267 267 267 TYR TYR A . n A 1 268 PRO 268 268 268 PRO PRO A . n A 1 269 ALA 269 269 269 ALA ALA A . n A 1 270 GLU 270 270 270 GLU GLU A . n A 1 271 GLN 271 271 271 GLN GLN A . n A 1 272 GLY 272 272 272 GLY GLY A . n A 1 273 VAL 273 273 273 VAL VAL A . n A 1 274 LYS 274 274 274 LYS LYS A . n A 1 275 VAL 275 275 275 VAL VAL A . n A 1 276 ALA 276 276 276 ALA ALA A . n A 1 277 ALA 277 277 277 ALA ALA A . n A 1 278 GLY 278 278 278 GLY GLY A . n A 1 279 TRP 279 279 279 TRP TRP A . n A 1 280 LEU 280 280 280 LEU LEU A . n A 1 281 ILE 281 281 281 ILE ILE A . n A 1 282 ASP 282 282 282 ASP ASP A . n A 1 283 GLN 283 283 283 GLN GLN A . n A 1 284 ALA 284 284 284 ALA ALA A . n A 1 285 GLY 285 285 285 GLY GLY A . n A 1 286 LEU 286 286 286 LEU LEU A . n A 1 287 LYS 287 287 287 LYS LYS A . n A 1 288 GLY 288 288 288 GLY GLY A . n A 1 289 HIS 289 289 289 HIS HIS A . n A 1 290 GLN 290 290 290 GLN GLN A . n A 1 291 ILE 291 291 291 ILE ILE A . n A 1 292 GLY 292 292 292 GLY GLY A . n A 1 293 GLY 293 293 293 GLY GLY A . n A 1 294 ALA 294 294 294 ALA ALA A . n A 1 295 LYS 295 295 295 LYS LYS A . n A 1 296 VAL 296 296 296 VAL VAL A . n A 1 297 HIS 297 297 297 HIS HIS A . n A 1 298 PRO 298 298 298 PRO PRO A . n A 1 299 LYS 299 299 299 LYS LYS A . n A 1 300 GLN 300 300 300 GLN GLN A . n A 1 301 ALA 301 301 301 ALA ALA A . n A 1 302 LEU 302 302 302 LEU LEU A . n A 1 303 VAL 303 303 303 VAL VAL A . n A 1 304 ILE 304 304 304 ILE ILE A . n A 1 305 VAL 305 305 305 VAL VAL A . n A 1 306 ASN 306 306 306 ASN ASN A . n A 1 307 THR 307 307 307 THR THR A . n A 1 308 GLY 308 308 308 GLY GLY A . n A 1 309 ASP 309 309 309 ASP ASP A . n A 1 310 ALA 310 310 310 ALA ALA A . n A 1 311 SER 311 311 311 SER SER A . n A 1 312 ALA 312 312 312 ALA ALA A . n A 1 313 GLN 313 313 313 GLN GLN A . n A 1 314 ASP 314 314 314 ASP ASP A . n A 1 315 VAL 315 315 315 VAL VAL A . n A 1 316 LEU 316 316 316 LEU LEU A . n A 1 317 MSE 317 317 317 MSE MSE A . n A 1 318 LEU 318 318 318 LEU LEU A . n A 1 319 ALA 319 319 319 ALA ALA A . n A 1 320 ALA 320 320 320 ALA ALA A . n A 1 321 ASP 321 321 321 ASP ASP A . n A 1 322 ILE 322 322 322 ILE ILE A . n A 1 323 GLN 323 323 323 GLN GLN A . n A 1 324 GLN 324 324 324 GLN GLN A . n A 1 325 ARG 325 325 325 ARG ARG A . n A 1 326 VAL 326 326 326 VAL VAL A . n A 1 327 PHE 327 327 327 PHE PHE A . n A 1 328 ASN 328 328 328 ASN ASN A . n A 1 329 CYS 329 329 329 CYS CYS A . n A 1 330 TYR 330 330 330 TYR TYR A . n A 1 331 GLY 331 331 331 GLY GLY A . n A 1 332 ILE 332 332 332 ILE ILE A . n A 1 333 GLU 333 333 333 GLU GLU A . n A 1 334 LEU 334 334 334 LEU LEU A . n A 1 335 GLU 335 335 335 GLU GLU A . n A 1 336 HIS 336 336 336 HIS HIS A . n A 1 337 GLU 337 337 337 GLU GLU A . n A 1 338 VAL 338 338 338 VAL VAL A . n A 1 339 ARG 339 339 339 ARG ARG A . n A 1 340 PHE 340 340 340 PHE PHE A . n A 1 341 ILE 341 341 341 ILE ILE A . n A 1 342 GLY 342 342 342 GLY GLY A . n A 1 343 GLU 343 343 343 GLU GLU A . n A 1 344 SER 344 344 344 SER SER A . n A 1 345 GLU 345 345 345 GLU GLU A . n A 1 346 GLU 346 346 346 GLU GLU A . n A 1 347 THR 347 347 347 THR THR A . n A 1 348 ASN 348 348 348 ASN ASN A . n A 1 349 LEU 349 349 ? ? ? A . n A 1 350 LYS 350 350 ? ? ? A . n A 1 351 GLN 351 351 ? ? ? A . n A 1 352 TRP 352 352 ? ? ? A . n A 1 353 MSE 353 353 ? ? ? A . n A 1 354 SER 354 354 ? ? ? A . n A 1 355 GLU 355 355 ? ? ? A . n A 1 356 GLN 356 356 ? ? ? A . n A 1 357 ALA 357 357 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Center for Structural Genomics of Infectious Diseases' _pdbx_SG_project.initial_of_center CSGID # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FAD 1 358 1 FAD FAD A . C 3 PO4 1 359 1 PO4 PO4 A . D 3 PO4 1 360 2 PO4 PO4 A . E 4 HOH 1 361 1 HOH HOH A . E 4 HOH 2 362 2 HOH HOH A . E 4 HOH 3 363 3 HOH HOH A . E 4 HOH 4 364 4 HOH HOH A . E 4 HOH 5 365 5 HOH HOH A . E 4 HOH 6 366 6 HOH HOH A . E 4 HOH 7 367 7 HOH HOH A . E 4 HOH 8 368 8 HOH HOH A . E 4 HOH 9 369 9 HOH HOH A . E 4 HOH 10 370 10 HOH HOH A . E 4 HOH 11 371 11 HOH HOH A . E 4 HOH 12 372 12 HOH HOH A . E 4 HOH 13 373 13 HOH HOH A . E 4 HOH 14 374 14 HOH HOH A . E 4 HOH 15 375 15 HOH HOH A . E 4 HOH 16 376 16 HOH HOH A . E 4 HOH 17 377 17 HOH HOH A . E 4 HOH 18 378 20 HOH HOH A . E 4 HOH 19 379 21 HOH HOH A . E 4 HOH 20 380 22 HOH HOH A . E 4 HOH 21 381 24 HOH HOH A . E 4 HOH 22 382 25 HOH HOH A . E 4 HOH 23 383 26 HOH HOH A . E 4 HOH 24 384 28 HOH HOH A . E 4 HOH 25 385 29 HOH HOH A . E 4 HOH 26 386 30 HOH HOH A . E 4 HOH 27 387 31 HOH HOH A . E 4 HOH 28 388 32 HOH HOH A . E 4 HOH 29 389 35 HOH HOH A . E 4 HOH 30 390 36 HOH HOH A . E 4 HOH 31 391 37 HOH HOH A . E 4 HOH 32 392 38 HOH HOH A . E 4 HOH 33 393 39 HOH HOH A . E 4 HOH 34 394 40 HOH HOH A . E 4 HOH 35 395 41 HOH HOH A . E 4 HOH 36 396 44 HOH HOH A . E 4 HOH 37 397 45 HOH HOH A . E 4 HOH 38 398 47 HOH HOH A . E 4 HOH 39 399 49 HOH HOH A . E 4 HOH 40 400 50 HOH HOH A . E 4 HOH 41 401 51 HOH HOH A . E 4 HOH 42 402 53 HOH HOH A . E 4 HOH 43 403 54 HOH HOH A . E 4 HOH 44 404 55 HOH HOH A . E 4 HOH 45 405 60 HOH HOH A . E 4 HOH 46 406 61 HOH HOH A . E 4 HOH 47 407 64 HOH HOH A . E 4 HOH 48 408 67 HOH HOH A . E 4 HOH 49 409 68 HOH HOH A . E 4 HOH 50 410 72 HOH HOH A . E 4 HOH 51 411 73 HOH HOH A . E 4 HOH 52 412 74 HOH HOH A . E 4 HOH 53 413 76 HOH HOH A . E 4 HOH 54 414 81 HOH HOH A . E 4 HOH 55 415 88 HOH HOH A . E 4 HOH 56 416 89 HOH HOH A . E 4 HOH 57 417 92 HOH HOH A . E 4 HOH 58 418 95 HOH HOH A . E 4 HOH 59 419 97 HOH HOH A . E 4 HOH 60 420 101 HOH HOH A . E 4 HOH 61 421 102 HOH HOH A . E 4 HOH 62 422 108 HOH HOH A . E 4 HOH 63 423 109 HOH HOH A . E 4 HOH 64 424 117 HOH HOH A . E 4 HOH 65 425 123 HOH HOH A . E 4 HOH 66 426 126 HOH HOH A . E 4 HOH 67 427 137 HOH HOH A . E 4 HOH 68 428 142 HOH HOH A . E 4 HOH 69 429 147 HOH HOH A . E 4 HOH 70 430 159 HOH HOH A . E 4 HOH 71 431 162 HOH HOH A . E 4 HOH 72 432 163 HOH HOH A . E 4 HOH 73 433 166 HOH HOH A . E 4 HOH 74 434 167 HOH HOH A . E 4 HOH 75 435 168 HOH HOH A . E 4 HOH 76 436 1 HOH HOH A . E 4 HOH 77 437 2 HOH HOH A . E 4 HOH 78 438 8 HOH HOH A . E 4 HOH 79 439 9 HOH HOH A . E 4 HOH 80 440 10 HOH HOH A . E 4 HOH 81 441 14 HOH HOH A . E 4 HOH 82 442 15 HOH HOH A . E 4 HOH 83 443 16 HOH HOH A . E 4 HOH 84 444 17 HOH HOH A . E 4 HOH 85 445 20 HOH HOH A . E 4 HOH 86 446 24 HOH HOH A . E 4 HOH 87 447 32 HOH HOH A . E 4 HOH 88 448 52 HOH HOH A . E 4 HOH 89 449 66 HOH HOH A . E 4 HOH 90 450 83 HOH HOH A . E 4 HOH 91 451 111 HOH HOH A . E 4 HOH 92 452 113 HOH HOH A . E 4 HOH 93 453 117 HOH HOH A . E 4 HOH 94 454 126 HOH HOH A . E 4 HOH 95 455 1 HOH HOH A . E 4 HOH 96 456 2 HOH HOH A . E 4 HOH 97 457 3 HOH HOH A . E 4 HOH 98 458 4 HOH HOH A . E 4 HOH 99 459 5 HOH HOH A . E 4 HOH 100 460 6 HOH HOH A . E 4 HOH 101 461 13 HOH HOH A . E 4 HOH 102 462 14 HOH HOH A . E 4 HOH 103 463 47 HOH HOH A . E 4 HOH 104 464 59 HOH HOH A . E 4 HOH 105 465 127 HOH HOH A . E 4 HOH 106 466 1 HOH HOH A . E 4 HOH 107 467 3 HOH HOH A . E 4 HOH 108 468 15 HOH HOH A . E 4 HOH 109 469 58 HOH HOH A . E 4 HOH 110 470 69 HOH HOH A . E 4 HOH 111 471 75 HOH HOH A . E 4 HOH 112 472 25 HOH HOH A . E 4 HOH 113 473 27 HOH HOH A . E 4 HOH 114 474 121 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 11 A MSE 11 ? MET SELENOMETHIONINE 2 A MSE 66 A MSE 66 ? MET SELENOMETHIONINE 3 A MSE 75 A MSE 75 ? MET SELENOMETHIONINE 4 A MSE 165 A MSE 165 ? MET SELENOMETHIONINE 5 A MSE 228 A MSE 228 ? MET SELENOMETHIONINE 6 A MSE 237 A MSE 237 ? MET SELENOMETHIONINE 7 A MSE 317 A MSE 317 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-10-20 2 'Structure model' 1 1 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 34.5740 _pdbx_refine_tls.origin_y 13.0450 _pdbx_refine_tls.origin_z 22.4850 _pdbx_refine_tls.T[1][1] 0.0375 _pdbx_refine_tls.T[2][2] 0.0135 _pdbx_refine_tls.T[3][3] 0.3073 _pdbx_refine_tls.T[1][2] 0.0148 _pdbx_refine_tls.T[1][3] -0.0012 _pdbx_refine_tls.T[2][3] 0.0198 _pdbx_refine_tls.L[1][1] 1.1313 _pdbx_refine_tls.L[2][2] 1.0828 _pdbx_refine_tls.L[3][3] 1.0121 _pdbx_refine_tls.L[1][2] -0.0709 _pdbx_refine_tls.L[1][3] -0.3380 _pdbx_refine_tls.L[2][3] 0.0889 _pdbx_refine_tls.S[1][1] -0.0121 _pdbx_refine_tls.S[1][2] 0.0668 _pdbx_refine_tls.S[1][3] 0.0689 _pdbx_refine_tls.S[2][1] -0.0330 _pdbx_refine_tls.S[2][2] 0.0297 _pdbx_refine_tls.S[2][3] 0.1108 _pdbx_refine_tls.S[3][1] -0.0996 _pdbx_refine_tls.S[3][2] -0.0618 _pdbx_refine_tls.S[3][3] -0.0176 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 10 A 50 ? . . . . ? 'X-RAY DIFFRACTION' 2 1 A 51 A 100 ? . . . . ? 'X-RAY DIFFRACTION' 3 1 A 101 A 150 ? . . . . ? 'X-RAY DIFFRACTION' 4 1 A 151 A 200 ? . . . . ? 'X-RAY DIFFRACTION' 5 1 A 201 A 250 ? . . . . ? 'X-RAY DIFFRACTION' 6 1 A 251 A 300 ? . . . . ? 'X-RAY DIFFRACTION' 7 1 A 301 A 348 ? . . . . ? 'X-RAY DIFFRACTION' 8 1 A 358 A 358 ? . . . . ? # _software.name REFMAC _software.classification refinement _software.version 5.5.0054 _software.citation_id ? _software.pdbx_ordinal 1 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CA _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 THR _pdbx_validate_rmsd_bond.auth_seq_id_1 9 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CB _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 THR _pdbx_validate_rmsd_bond.auth_seq_id_2 9 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.734 _pdbx_validate_rmsd_bond.bond_target_value 1.529 _pdbx_validate_rmsd_bond.bond_deviation 0.205 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.026 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 89 ? ? CG A ASP 89 ? ? OD1 A ASP 89 ? ? 111.39 118.30 -6.91 0.90 N 2 1 CB A ASP 89 ? ? CG A ASP 89 ? ? OD2 A ASP 89 ? ? 124.04 118.30 5.74 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 179 ? ? -121.67 -106.32 2 1 ILE A 202 ? ? -149.00 42.26 3 1 GLN A 300 ? ? -165.48 95.28 4 1 SER A 344 ? ? -132.36 -39.57 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE 1 ? A MSE 1 2 1 Y 1 A ALA 2 ? A ALA 2 3 1 Y 1 A SER 3 ? A SER 3 4 1 Y 1 A LEU 4 ? A LEU 4 5 1 Y 1 A SER 5 ? A SER 5 6 1 Y 1 A TYR 6 ? A TYR 6 7 1 Y 1 A PRO 7 ? A PRO 7 8 1 Y 1 A LYS 8 ? A LYS 8 9 1 Y 1 A LEU 349 ? A LEU 349 10 1 Y 1 A LYS 350 ? A LYS 350 11 1 Y 1 A GLN 351 ? A GLN 351 12 1 Y 1 A TRP 352 ? A TRP 352 13 1 Y 1 A MSE 353 ? A MSE 353 14 1 Y 1 A SER 354 ? A SER 354 15 1 Y 1 A GLU 355 ? A GLU 355 16 1 Y 1 A GLN 356 ? A GLN 356 17 1 Y 1 A ALA 357 ? A ALA 357 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'FLAVIN-ADENINE DINUCLEOTIDE' FAD 3 'PHOSPHATE ION' PO4 4 water HOH #