HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 16-JUL-09 3IBM TITLE CRYSTAL STRUCTURE OF CUPIN 2 DOMAIN-CONTAINING PROTEIN HHAL_0468 FROM TITLE 2 HALORHODOSPIRA HALOPHILA COMPND MOL_ID: 1; COMPND 2 MOLECULE: CUPIN 2, CONSERVED BARREL DOMAIN PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HALORHODOSPIRA HALOPHILA SL1; SOURCE 3 ORGANISM_COMMON: ECTOTHIORHODOSPIRA HALOPHILA (STRAIN DSM 244 / SOURCE 4 SL1); SOURCE 5 ORGANISM_TAXID: 349124; SOURCE 6 GENE: HHAL_0468; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CUPIN 2 FAMILY, METAL-BINDING SITE, BETA BARREL, PSI-2, NYSGXRC, KEYWDS 2 STRUCTURAL GENOMICS, PROTEIN STRUCTURE INITIATIVE, NEW YORK SGX KEYWDS 3 RESEARCH CENTER FOR STRUCTURAL GENOMICS, UNCHARACTERIZED PROTEIN, KEYWDS 4 UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR Y.PATSKOVSKY,R.TORO,J.FREEMAN,S.MILLER,J.M.SAUDER,S.K.BURLEY, AUTHOR 2 S.C.ALMO,NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL GENOMICS AUTHOR 3 (NYSGXRC) REVDAT 5 21-FEB-24 3IBM 1 REMARK REVDAT 4 10-FEB-21 3IBM 1 AUTHOR JRNL REMARK SEQADV REVDAT 4 2 1 LINK REVDAT 3 21-NOV-18 3IBM 1 AUTHOR REVDAT 2 13-JUL-11 3IBM 1 VERSN REVDAT 1 28-JUL-09 3IBM 0 JRNL AUTH Y.PATSKOVSKY,R.TORO,J.FREEMAN,S.MILLER,J.M.SAUDER, JRNL AUTH 2 S.K.BURLEY,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF CUPIN 2 DOMAIN-CONTAINING PROTEIN JRNL TITL 2 HHAL_0468 FROM HALORHODOSPIRA HALOPHILA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.3.0034 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 19487 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.258 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.200 REMARK 3 FREE R VALUE TEST SET COUNT : 650 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1397 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.25 REMARK 3 BIN R VALUE (WORKING SET) : 0.2440 REMARK 3 BIN FREE R VALUE SET COUNT : 49 REMARK 3 BIN FREE R VALUE : 0.2670 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2336 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 166 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.36 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.88000 REMARK 3 B22 (A**2) : -1.59000 REMARK 3 B33 (A**2) : 0.70000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.210 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.189 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.163 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.031 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.919 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2423 ; 0.008 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3294 ; 1.206 ; 1.938 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 293 ; 6.706 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 140 ;32.552 ;21.929 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 376 ;15.491 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 38 ;12.487 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 345 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1950 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1068 ; 0.156 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1583 ; 0.293 ; 0.500 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 323 ; 0.147 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 1 ; 0.026 ; 0.500 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 44 ; 0.105 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 20 ; 0.163 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1461 ; 2.701 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2359 ; 4.182 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 970 ; 5.329 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 932 ; 7.888 ; 5.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 0 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 LOOSE POSITIONAL 1 A (A): 1112 ; 0.54 ; 1.00 REMARK 3 LOOSE THERMAL 1 A (A**2): 1112 ; 4.33 ; 5.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3IBM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-JUL-09. REMARK 100 THE DEPOSITION ID IS D_1000054209. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JUN-09 REMARK 200 TEMPERATURE (KELVIN) : 90 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9789 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20451 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -5.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 5.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07800 REMARK 200 FOR THE DATA SET : 7.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.8 REMARK 200 DATA REDUNDANCY IN SHELL : 4.70 REMARK 200 R MERGE FOR SHELL (I) : 0.45000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG3350, PH 7.5, 200MM POTASSIUM REMARK 280 SODIUM TARTRATE, 10% GLYCEROL, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.89550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.89200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 25.86700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 58.89200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.89550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 25.86700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -100.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -1 REMARK 465 SER A 0 REMARK 465 LEU A 1 REMARK 465 SER A 2 REMARK 465 SER A 3 REMARK 465 GLY A 4 REMARK 465 GLU A 5 REMARK 465 ALA A 26 REMARK 465 TYR A 27 REMARK 465 LYS A 28 REMARK 465 ALA A 29 REMARK 465 GLU A 30 REMARK 465 GLY A 31 REMARK 465 THR A 32 REMARK 465 HIS A 33 REMARK 465 PHE A 34 REMARK 465 HIS A 160 REMARK 465 HIS A 161 REMARK 465 HIS A 162 REMARK 465 HIS A 163 REMARK 465 HIS A 164 REMARK 465 HIS A 165 REMARK 465 MET B -1 REMARK 465 SER B 0 REMARK 465 LEU B 1 REMARK 465 SER B 2 REMARK 465 SER B 3 REMARK 465 GLY B 4 REMARK 465 GLU B 5 REMARK 465 HIS B 6 REMARK 465 TYR B 27 REMARK 465 LYS B 28 REMARK 465 ALA B 29 REMARK 465 GLU B 30 REMARK 465 GLY B 31 REMARK 465 THR B 32 REMARK 465 HIS B 33 REMARK 465 PHE B 34 REMARK 465 SER B 35 REMARK 465 GLY B 36 REMARK 465 ALA B 37 REMARK 465 HIS B 164 REMARK 465 HIS B 165 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 90 -110.63 51.47 REMARK 500 ASP B 90 -108.16 46.13 REMARK 500 LEU B 99 51.71 -114.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 201 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 14 O REMARK 620 2 THR A 97 OG1 154.4 REMARK 620 3 PRO A 98 O 123.1 78.7 REMARK 620 4 ASP A 100 OD1 88.3 95.8 111.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 200 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 70 OE1 REMARK 620 2 HIS A 72 NE2 100.1 REMARK 620 3 HIS A 76 NE2 157.2 90.4 REMARK 620 4 HIS A 110 NE2 98.7 92.5 101.0 REMARK 620 5 HOH A 237 O 71.5 87.0 89.1 170.0 REMARK 620 6 HOH A 238 O 77.0 171.8 89.8 95.5 84.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K B 201 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 14 O REMARK 620 2 THR B 97 OG1 158.4 REMARK 620 3 PRO B 98 O 121.9 79.2 REMARK 620 4 ASP B 100 OD1 84.1 93.9 108.8 REMARK 620 5 HOH B 210 O 68.9 119.3 70.8 145.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 200 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 70 OE2 REMARK 620 2 HIS B 72 NE2 93.6 REMARK 620 3 HIS B 76 NE2 159.8 91.7 REMARK 620 4 HIS B 110 NE2 96.5 95.1 102.4 REMARK 620 5 HOH B 195 O 74.8 85.2 86.2 171.3 REMARK 620 6 HOH B 212 O 78.6 171.6 94.6 88.9 89.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 166 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-9494C RELATED DB: TARGETDB DBREF 3IBM A 2 157 UNP A1WU94 A1WU94_HALHL 2 157 DBREF 3IBM B 2 157 UNP A1WU94 A1WU94_HALHL 2 157 SEQADV 3IBM MET A -1 UNP A1WU94 EXPRESSION TAG SEQADV 3IBM SER A 0 UNP A1WU94 EXPRESSION TAG SEQADV 3IBM LEU A 1 UNP A1WU94 EXPRESSION TAG SEQADV 3IBM MET A 79 UNP A1WU94 ILE 79 CLONING ARTIFACT SEQADV 3IBM MET A 145 UNP A1WU94 LEU 145 CLONING ARTIFACT SEQADV 3IBM GLU A 158 UNP A1WU94 EXPRESSION TAG SEQADV 3IBM GLY A 159 UNP A1WU94 EXPRESSION TAG SEQADV 3IBM HIS A 160 UNP A1WU94 EXPRESSION TAG SEQADV 3IBM HIS A 161 UNP A1WU94 EXPRESSION TAG SEQADV 3IBM HIS A 162 UNP A1WU94 EXPRESSION TAG SEQADV 3IBM HIS A 163 UNP A1WU94 EXPRESSION TAG SEQADV 3IBM HIS A 164 UNP A1WU94 EXPRESSION TAG SEQADV 3IBM HIS A 165 UNP A1WU94 EXPRESSION TAG SEQADV 3IBM MET B -1 UNP A1WU94 EXPRESSION TAG SEQADV 3IBM SER B 0 UNP A1WU94 EXPRESSION TAG SEQADV 3IBM LEU B 1 UNP A1WU94 EXPRESSION TAG SEQADV 3IBM MET B 79 UNP A1WU94 ILE 79 CLONING ARTIFACT SEQADV 3IBM MET B 145 UNP A1WU94 LEU 145 CLONING ARTIFACT SEQADV 3IBM GLU B 158 UNP A1WU94 EXPRESSION TAG SEQADV 3IBM GLY B 159 UNP A1WU94 EXPRESSION TAG SEQADV 3IBM HIS B 160 UNP A1WU94 EXPRESSION TAG SEQADV 3IBM HIS B 161 UNP A1WU94 EXPRESSION TAG SEQADV 3IBM HIS B 162 UNP A1WU94 EXPRESSION TAG SEQADV 3IBM HIS B 163 UNP A1WU94 EXPRESSION TAG SEQADV 3IBM HIS B 164 UNP A1WU94 EXPRESSION TAG SEQADV 3IBM HIS B 165 UNP A1WU94 EXPRESSION TAG SEQRES 1 A 167 MET SER LEU SER SER GLY GLU HIS GLU ALA SER ARG VAL SEQRES 2 A 167 LEU ARG GLU ARG ASP TYR ARG TRP GLU GLY THR GLU GLU SEQRES 3 A 167 GLU ALA TYR LYS ALA GLU GLY THR HIS PHE SER GLY ALA SEQRES 4 A 167 ARG ARG GLN THR LEU VAL GLY ARG PRO ALA GLY GLN GLU SEQRES 5 A 167 ALA PRO ALA PHE GLU THR ARG TYR PHE GLU VAL GLU PRO SEQRES 6 A 167 GLY GLY TYR THR THR LEU GLU ARG HIS GLU HIS THR HIS SEQRES 7 A 167 VAL VAL MET VAL VAL ARG GLY HIS ALA GLU VAL VAL LEU SEQRES 8 A 167 ASP ASP ARG VAL GLU PRO LEU THR PRO LEU ASP CYS VAL SEQRES 9 A 167 TYR ILE ALA PRO HIS ALA TRP HIS GLN ILE HIS ALA THR SEQRES 10 A 167 GLY ALA ASN GLU PRO LEU GLY PHE LEU CYS ILE VAL ASP SEQRES 11 A 167 SER ASP ARG ASP ARG PRO GLN ARG PRO ASP ALA ASP ASP SEQRES 12 A 167 LEU ALA ARG MET CYS ALA ASP PRO ALA VAL ALA ARG ARG SEQRES 13 A 167 ILE ARG THR GLU GLY HIS HIS HIS HIS HIS HIS SEQRES 1 B 167 MET SER LEU SER SER GLY GLU HIS GLU ALA SER ARG VAL SEQRES 2 B 167 LEU ARG GLU ARG ASP TYR ARG TRP GLU GLY THR GLU GLU SEQRES 3 B 167 GLU ALA TYR LYS ALA GLU GLY THR HIS PHE SER GLY ALA SEQRES 4 B 167 ARG ARG GLN THR LEU VAL GLY ARG PRO ALA GLY GLN GLU SEQRES 5 B 167 ALA PRO ALA PHE GLU THR ARG TYR PHE GLU VAL GLU PRO SEQRES 6 B 167 GLY GLY TYR THR THR LEU GLU ARG HIS GLU HIS THR HIS SEQRES 7 B 167 VAL VAL MET VAL VAL ARG GLY HIS ALA GLU VAL VAL LEU SEQRES 8 B 167 ASP ASP ARG VAL GLU PRO LEU THR PRO LEU ASP CYS VAL SEQRES 9 B 167 TYR ILE ALA PRO HIS ALA TRP HIS GLN ILE HIS ALA THR SEQRES 10 B 167 GLY ALA ASN GLU PRO LEU GLY PHE LEU CYS ILE VAL ASP SEQRES 11 B 167 SER ASP ARG ASP ARG PRO GLN ARG PRO ASP ALA ASP ASP SEQRES 12 B 167 LEU ALA ARG MET CYS ALA ASP PRO ALA VAL ALA ARG ARG SEQRES 13 B 167 ILE ARG THR GLU GLY HIS HIS HIS HIS HIS HIS HET ZN A 200 1 HET K A 201 1 HET ZN B 200 1 HET K B 201 1 HET GOL B 166 6 HETNAM ZN ZINC ION HETNAM K POTASSIUM ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 ZN 2(ZN 2+) FORMUL 4 K 2(K 1+) FORMUL 7 GOL C3 H8 O3 FORMUL 8 HOH *166(H2 O) HELIX 1 1 ASP A 138 CYS A 146 1 9 HELIX 2 2 ASP A 148 ILE A 155 1 8 HELIX 3 3 GLY B 44 GLY B 48 5 5 HELIX 4 4 ASP B 138 CYS B 146 1 9 HELIX 5 5 ASP B 148 ILE B 155 1 8 SHEET 1 A 6 ARG A 10 LEU A 12 0 SHEET 2 A 6 CYS A 101 ILE A 104 -1 O CYS A 101 N LEU A 12 SHEET 3 A 6 HIS A 76 ARG A 82 -1 N VAL A 78 O VAL A 102 SHEET 4 A 6 LEU A 121 ASP A 128 -1 O LEU A 124 N MET A 79 SHEET 5 A 6 PHE A 54 VAL A 61 -1 N ARG A 57 O CYS A 125 SHEET 6 A 6 ALA A 37 VAL A 43 -1 N ARG A 38 O GLU A 60 SHEET 1 B 2 GLU A 14 ARG A 15 0 SHEET 2 B 2 ARG A 18 TRP A 19 -1 O ARG A 18 N ARG A 15 SHEET 1 C 3 ARG A 92 LEU A 96 0 SHEET 2 C 3 HIS A 84 LEU A 89 -1 N ALA A 85 O LEU A 96 SHEET 3 C 3 HIS A 110 THR A 115 -1 O GLN A 111 N VAL A 88 SHEET 1 D 6 ARG B 10 LEU B 12 0 SHEET 2 D 6 CYS B 101 ILE B 104 -1 O CYS B 101 N LEU B 12 SHEET 3 D 6 HIS B 76 ARG B 82 -1 N HIS B 76 O ILE B 104 SHEET 4 D 6 LEU B 121 ASP B 128 -1 O LEU B 124 N MET B 79 SHEET 5 D 6 PHE B 54 VAL B 61 -1 N GLU B 55 O VAL B 127 SHEET 6 D 6 ARG B 39 VAL B 43 -1 N VAL B 43 O THR B 56 SHEET 1 E 2 GLU B 14 ARG B 15 0 SHEET 2 E 2 ARG B 18 TRP B 19 -1 O ARG B 18 N ARG B 15 SHEET 1 F 3 ARG B 92 LEU B 96 0 SHEET 2 F 3 ALA B 85 LEU B 89 -1 N ALA B 85 O LEU B 96 SHEET 3 F 3 HIS B 110 ALA B 114 -1 O GLN B 111 N VAL B 88 LINK O GLU A 14 K K A 201 1555 1555 2.81 LINK OE1 GLU A 70 ZN ZN A 200 1555 1555 2.20 LINK NE2 HIS A 72 ZN ZN A 200 1555 1555 2.11 LINK NE2 HIS A 76 ZN ZN A 200 1555 1555 2.10 LINK OG1 THR A 97 K K A 201 1555 1555 2.96 LINK O PRO A 98 K K A 201 1555 1555 2.97 LINK OD1 ASP A 100 K K A 201 1555 1555 2.90 LINK NE2 HIS A 110 ZN ZN A 200 1555 1555 2.17 LINK ZN ZN A 200 O HOH A 237 1555 1555 2.24 LINK ZN ZN A 200 O HOH A 238 1555 1555 2.25 LINK O GLU B 14 K K B 201 1555 1555 2.85 LINK OE2 GLU B 70 ZN ZN B 200 1555 1555 2.30 LINK NE2 HIS B 72 ZN ZN B 200 1555 1555 2.17 LINK NE2 HIS B 76 ZN ZN B 200 1555 1555 2.19 LINK OG1 THR B 97 K K B 201 1555 1555 2.96 LINK O PRO B 98 K K B 201 1555 1555 2.99 LINK OD1 ASP B 100 K K B 201 1555 1555 2.88 LINK NE2 HIS B 110 ZN ZN B 200 1555 1555 2.11 LINK O HOH B 195 ZN ZN B 200 1555 1555 2.12 LINK ZN ZN B 200 O HOH B 212 1555 1555 2.14 LINK K K B 201 O HOH B 210 1555 1555 2.76 CISPEP 1 PRO A 98 LEU A 99 0 5.40 CISPEP 2 PRO B 98 LEU B 99 0 5.13 SITE 1 AC1 6 GLU A 70 HIS A 72 HIS A 76 HIS A 110 SITE 2 AC1 6 HOH A 237 HOH A 238 SITE 1 AC2 5 GLU A 14 THR A 97 PRO A 98 LEU A 99 SITE 2 AC2 5 ASP A 100 SITE 1 AC3 6 GLU B 70 HIS B 72 HIS B 76 HIS B 110 SITE 2 AC3 6 HOH B 195 HOH B 212 SITE 1 AC4 5 GLU B 14 THR B 97 PRO B 98 ASP B 100 SITE 2 AC4 5 HOH B 210 SITE 1 AC5 3 ARG B 57 HIS B 74 ARG B 131 CRYST1 47.791 51.734 117.784 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020924 0.000000 0.000000 0.00000 SCALE2 0.000000 0.019330 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008490 0.00000