HEADER TRANSFERASE 22-JUL-09 3IE7 TITLE THE CRYSTAL STRUCTURE OF PHOSPHOFRUCTOKINASE (LIN2199) FROM LISTERIA TITLE 2 INNOCUA IN COMPLEX WITH ATP AT 1.6A COMPND MOL_ID: 1; COMPND 2 MOLECULE: LIN2199 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 EC: 2.7.1.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LISTERIA INNOCUA; SOURCE 3 ORGANISM_TAXID: 1642; SOURCE 4 GENE: LIN2199; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) CODON + RIL; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: BC-PSGX3 (BC); SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PSGX3 KEYWDS PHOSPHOFRUCTOKINASES, TRANSFERASE, LISTERIA INNOCUA, GLYCEROL, MG+2 KEYWDS 2 ION, 11206N1, PSI-II, NYSGXRC, KINASE, STRUCTURAL GENOMICS, PROTEIN KEYWDS 3 STRUCTURE INITIATIVE, NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL KEYWDS 4 GENOMICS EXPDTA X-RAY DIFFRACTION AUTHOR L.SATYANARAYANA,S.K.BURLEY,S.SWAMINATHAN,NEW YORK SGX RESEARCH CENTER AUTHOR 2 FOR STRUCTURAL GENOMICS (NYSGXRC) REVDAT 6 09-OCT-24 3IE7 1 REMARK REVDAT 5 22-NOV-23 3IE7 1 REMARK REVDAT 4 06-SEP-23 3IE7 1 REMARK REVDAT 3 10-FEB-21 3IE7 1 AUTHOR JRNL REMARK SEQADV REVDAT 3 2 1 LINK REVDAT 2 13-JUL-11 3IE7 1 VERSN REVDAT 1 04-AUG-09 3IE7 0 JRNL AUTH L.SATYANARAYANA,S.K.BURLEY,S.SWAMINATHAN JRNL TITL THE CRYSTAL STRUCTURE OF PHOSPHOFRUCTOKINASE (LIN2199) FROM JRNL TITL 2 LISTERIA INNOCUA IN COMPLEX WITH ATP AT 1.6A JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.85 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 93.7 REMARK 3 NUMBER OF REFLECTIONS : 46781 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.219 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1883 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.70 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 78.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2970 REMARK 3 BIN FREE R VALUE : 0.3240 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 250 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.020 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2352 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 40 REMARK 3 SOLVENT ATOMS : 272 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.19000 REMARK 3 B22 (A**2) : 8.99000 REMARK 3 B33 (A**2) : -5.80000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.79000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.21 REMARK 3 ESD FROM SIGMAA (A) : 0.18 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.23 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.21 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.005 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.90 REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : ATP.PAR REMARK 3 PARAMETER FILE 5 : GLYCEROL.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3IE7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-JUL-09. REMARK 100 THE DEPOSITION ID IS D_1000054300. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUL-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X25 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48696 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06800 REMARK 200 FOR THE DATA SET : 15.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 78.5 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.41300 REMARK 200 FOR SHELL : 8.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3HIC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M MGCL2,10MMATP,0.1M HEPES 7.5, 20% REMARK 280 PEG 3350%, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 292K, PH REMARK 280 7.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 73.05400 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 23.12200 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 73.05400 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 23.12200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5370 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25510 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -73.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -3 REMARK 465 GLU A 309 REMARK 465 ARG A 310 REMARK 465 GLU A 311 REMARK 465 GLY A 312 REMARK 465 HIS A 313 REMARK 465 HIS A 314 REMARK 465 HIS A 315 REMARK 465 HIS A 316 REMARK 465 HIS A 317 REMARK 465 HIS A 318 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 80 63.95 -152.40 REMARK 500 ASN A 245 108.46 -160.38 REMARK 500 ASP A 286 -166.87 -68.44 REMARK 500 SER A 288 -29.21 -154.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 1 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 504 O REMARK 620 2 HOH A 505 O 94.6 REMARK 620 3 ATP A 900 O1B 96.0 157.6 REMARK 620 4 ATP A 900 O1A 86.4 77.8 83.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 319 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 380 O REMARK 620 2 HOH A 500 O 92.8 REMARK 620 3 HOH A 502 O 89.4 88.4 REMARK 620 4 HOH A 503 O 81.3 92.2 170.7 REMARK 620 5 ATP A 900 O1G 92.2 169.0 101.5 78.8 REMARK 620 6 ATP A 900 O2B 170.1 86.2 100.4 88.9 87.3 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP A 900 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 319 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 320 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3HIC RELATED DB: PDB REMARK 900 THE CRYSTAL STRUCTURE OF PHOSPHOFRUCTOKINASE(LIN2199)FROM LISTERIA REMARK 900 INNOCUA REMARK 900 RELATED ID: 3H49 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A PUTATIVE RIBOKINASE (APO FORM) FROM E.COLI REMARK 900 AT 1.8A RESOLUTION REMARK 900 RELATED ID: 3I3Y RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RIBOKINASE IN COMPLEX WITH D-RIBOSE FROM REMARK 900 KLEBSIELLA PNEUMONIAE REMARK 900 RELATED ID: NYSGXRC-11206N RELATED DB: TARGETDB DBREF 3IE7 A 2 310 UNP Q929S5 Q929S5_LISIN 2 310 SEQADV 3IE7 MSE A -3 UNP Q929S5 INSERTION SEQADV 3IE7 SER A -2 UNP Q929S5 INSERTION SEQADV 3IE7 LEU A -1 UNP Q929S5 INSERTION SEQADV 3IE7 GLU A 311 UNP Q929S5 INSERTION SEQADV 3IE7 GLY A 312 UNP Q929S5 INSERTION SEQADV 3IE7 HIS A 313 UNP Q929S5 INSERTION SEQADV 3IE7 HIS A 314 UNP Q929S5 INSERTION SEQADV 3IE7 HIS A 315 UNP Q929S5 INSERTION SEQADV 3IE7 HIS A 316 UNP Q929S5 INSERTION SEQADV 3IE7 HIS A 317 UNP Q929S5 INSERTION SEQADV 3IE7 HIS A 318 UNP Q929S5 INSERTION SEQRES 1 A 320 MSE SER LEU ILE TYR THR ILE THR LEU ASN PRO ALA ILE SEQRES 2 A 320 ASP ARG LEU LEU PHE ILE ARG GLY GLU LEU GLU LYS ARG SEQRES 3 A 320 LYS THR ASN ARG VAL ILE LYS THR GLU PHE ASP CYS GLY SEQRES 4 A 320 GLY LYS GLY LEU HIS VAL SER GLY VAL LEU SER LYS PHE SEQRES 5 A 320 GLY ILE LYS ASN GLU ALA LEU GLY ILE ALA GLY SER ASP SEQRES 6 A 320 ASN LEU ASP LYS LEU TYR ALA ILE LEU LYS GLU LYS HIS SEQRES 7 A 320 ILE ASN HIS ASP PHE LEU VAL GLU ALA GLY THR SER THR SEQRES 8 A 320 ARG GLU CYS PHE VAL VAL LEU SER ASP ASP THR ASN GLY SEQRES 9 A 320 SER THR MSE ILE PRO GLU ALA GLY PHE THR VAL SER GLN SEQRES 10 A 320 THR ASN LYS ASP ASN LEU LEU LYS GLN ILE ALA LYS LYS SEQRES 11 A 320 VAL LYS LYS GLU ASP MSE VAL VAL ILE ALA GLY SER PRO SEQRES 12 A 320 PRO PRO HIS TYR THR LEU SER ASP PHE LYS GLU LEU LEU SEQRES 13 A 320 ARG THR VAL LYS ALA THR GLY ALA PHE LEU GLY CYS ASP SEQRES 14 A 320 ASN SER GLY GLU TYR LEU ASN LEU ALA VAL GLU MSE GLY SEQRES 15 A 320 VAL ASP PHE ILE LYS PRO ASN GLU ASP GLU VAL ILE ALA SEQRES 16 A 320 ILE LEU ASP GLU LYS THR ASN SER LEU GLU GLU ASN ILE SEQRES 17 A 320 ARG THR LEU ALA GLU LYS ILE PRO TYR LEU VAL VAL SER SEQRES 18 A 320 LEU GLY ALA LYS GLY SER ILE CYS ALA HIS ASN GLY LYS SEQRES 19 A 320 LEU TYR GLN VAL ILE PRO PRO LYS VAL GLN GLU ARG ASN SEQRES 20 A 320 ASP THR GLY ALA GLY ASP VAL PHE VAL GLY ALA PHE ILE SEQRES 21 A 320 ALA GLY LEU ALA MSE ASN MSE PRO ILE THR GLU THR LEU SEQRES 22 A 320 LYS VAL ALA THR GLY CYS SER ALA SER LYS VAL MSE GLN SEQRES 23 A 320 GLN ASP SER SER SER PHE ASP LEU GLU ALA ALA GLY LYS SEQRES 24 A 320 LEU LYS ASN GLN VAL SER ILE ILE GLN LEU GLU GLU ARG SEQRES 25 A 320 GLU GLY HIS HIS HIS HIS HIS HIS MODRES 3IE7 MSE A 105 MET SELENOMETHIONINE MODRES 3IE7 MSE A 134 MET SELENOMETHIONINE MODRES 3IE7 MSE A 179 MET SELENOMETHIONINE MODRES 3IE7 MSE A 263 MET SELENOMETHIONINE MODRES 3IE7 MSE A 265 MET SELENOMETHIONINE MODRES 3IE7 MSE A 283 MET SELENOMETHIONINE HET MSE A 105 8 HET MSE A 134 8 HET MSE A 179 8 HET MSE A 263 8 HET MSE A 265 8 HET MSE A 283 8 HET ATP A 900 31 HET MG A 1 1 HET MG A 319 1 HET MG A 320 1 HET GOL A 501 6 HETNAM MSE SELENOMETHIONINE HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 2 ATP C10 H16 N5 O13 P3 FORMUL 3 MG 3(MG 2+) FORMUL 6 GOL C3 H8 O3 FORMUL 7 HOH *272(H2 O) HELIX 1 1 GLY A 38 GLY A 51 1 14 HELIX 2 2 ASN A 64 LYS A 75 1 12 HELIX 3 3 SER A 114 VAL A 129 1 16 HELIX 4 4 THR A 146 GLY A 161 1 16 HELIX 5 5 SER A 169 GLY A 180 1 12 HELIX 6 6 ASP A 189 LEU A 195 5 7 HELIX 7 7 SER A 201 ALA A 210 1 10 HELIX 8 8 GLY A 221 LYS A 223 5 3 HELIX 9 9 GLY A 248 MSE A 263 1 16 HELIX 10 10 PRO A 266 MSE A 283 1 18 HELIX 11 11 ASP A 291 LYS A 299 1 9 HELIX 12 12 ASN A 300 VAL A 302 5 3 SHEET 1 A10 LEU A 82 GLU A 84 0 SHEET 2 A10 ASN A 54 GLY A 61 1 N GLY A 58 O LEU A 82 SHEET 3 A10 ILE A 2 THR A 6 1 N THR A 4 O LEU A 57 SHEET 4 A10 MSE A 134 ALA A 138 1 O VAL A 136 N TYR A 3 SHEET 5 A10 PHE A 163 ASP A 167 1 O GLY A 165 N VAL A 135 SHEET 6 A10 PHE A 183 ILE A 184 1 O PHE A 183 N CYS A 166 SHEET 7 A10 TYR A 215 SER A 219 1 O VAL A 217 N ILE A 184 SHEET 8 A10 SER A 225 HIS A 229 -1 O ALA A 228 N LEU A 216 SHEET 9 A10 LYS A 232 ILE A 237 -1 O VAL A 236 N SER A 225 SHEET 10 A10 SER A 303 GLN A 306 -1 O ILE A 305 N GLN A 235 SHEET 1 B 4 LYS A 31 GLY A 37 0 SHEET 2 B 4 ALA A 10 ILE A 17 -1 N ALA A 10 O GLY A 37 SHEET 3 B 4 ARG A 90 SER A 97 1 O VAL A 94 N LEU A 15 SHEET 4 B 4 THR A 104 PRO A 107 -1 O ILE A 106 N PHE A 93 LINK C THR A 104 N MSE A 105 1555 1555 1.32 LINK C MSE A 105 N ILE A 106 1555 1555 1.33 LINK C ASP A 133 N MSE A 134 1555 1555 1.33 LINK C MSE A 134 N VAL A 135 1555 1555 1.33 LINK C GLU A 178 N MSE A 179 1555 1555 1.33 LINK C MSE A 179 N GLY A 180 1555 1555 1.33 LINK C ALA A 262 N MSE A 263 1555 1555 1.33 LINK C MSE A 263 N ASN A 264 1555 1555 1.33 LINK C ASN A 264 N MSE A 265 1555 1555 1.33 LINK C MSE A 265 N PRO A 266 1555 1555 1.34 LINK C VAL A 282 N MSE A 283 1555 1555 1.33 LINK C MSE A 283 N GLN A 284 1555 1555 1.33 LINK MG MG A 1 O HOH A 504 1555 1555 2.09 LINK MG MG A 1 O HOH A 505 1555 1555 2.12 LINK MG MG A 1 O1B ATP A 900 1555 1555 2.14 LINK MG MG A 1 O1A ATP A 900 1555 1555 2.24 LINK MG MG A 319 O HOH A 380 1555 1555 2.12 LINK MG MG A 319 O HOH A 500 1555 1555 2.03 LINK MG MG A 319 O HOH A 502 1555 1555 2.05 LINK MG MG A 319 O HOH A 503 1555 1555 2.13 LINK MG MG A 319 O1G ATP A 900 1555 1555 2.27 LINK MG MG A 319 O2B ATP A 900 1555 1555 2.08 SITE 1 AC1 26 MG A 1 LYS A 185 ASN A 187 SER A 219 SITE 2 AC1 26 GLY A 221 ALA A 222 GLY A 224 GLU A 243 SITE 3 AC1 26 GLY A 248 ALA A 249 GLY A 250 ASP A 251 SITE 4 AC1 26 SER A 278 VAL A 282 MG A 319 HOH A 337 SITE 5 AC1 26 HOH A 350 HOH A 360 HOH A 378 HOH A 407 SITE 6 AC1 26 HOH A 477 HOH A 500 HOH A 503 HOH A 504 SITE 7 AC1 26 HOH A 505 HOH A 587 SITE 1 AC2 3 HOH A 504 HOH A 505 ATP A 900 SITE 1 AC3 5 HOH A 380 HOH A 500 HOH A 502 HOH A 503 SITE 2 AC3 5 ATP A 900 SITE 1 AC4 4 GLY A 38 LYS A 39 GLY A 139 GOL A 501 SITE 1 AC5 8 ASP A 12 GLY A 37 GLY A 38 LYS A 39 SITE 2 AC5 8 HIS A 42 MSE A 105 SER A 287 MG A 320 CRYST1 146.108 46.244 57.762 90.00 102.08 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006844 0.000000 0.001465 0.00000 SCALE2 0.000000 0.021624 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017704 0.00000