data_3IGE # _entry.id 3IGE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3IGE pdb_00003ige 10.2210/pdb3ige/pdb RCSB RCSB054377 ? ? WWPDB D_1000054377 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-12-08 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2024-02-21 4 'Structure model' 1 3 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' struct_site 5 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3IGE _pdbx_database_status.recvd_initial_deposition_date 2009-07-27 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3IG9 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Li, Q.' 1 'Fokine, A.' 2 ;O'Donnell, E. ; 3 'Rao, V.B.' 4 'Rossmann, M.G.' 5 # _citation.id primary _citation.title 'Structure of the Small Outer Capsid Protein, Soc: A Clamp for Stabilizing Capsids of T4-like Phages' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 395 _citation.page_first 728 _citation.page_last 741 _citation.year 2010 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19835886 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2009.10.007 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Qin, L.' 1 ? primary 'Fokine, A.' 2 ? primary ;O'Donnell, E. ; 3 ? primary 'Rao, V.B.' 4 ? primary 'Rossmann, M.G.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Soc small outer capsid protein' 8563.533 2 ? ? ? ? 2 non-polymer syn IMIDAZOLE 69.085 2 ? ? ? ? 3 water nat water 18.015 120 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code MGGYVNIKTFTHPAGEGKEVKGMEVSVPFEIYSNEHRIADAHYQTFPSEKAAYTTVVTDAADWRTKNAAMFTPTPVSG _entity_poly.pdbx_seq_one_letter_code_can MGGYVNIKTFTHPAGEGKEVKGMEVSVPFEIYSNEHRIADAHYQTFPSEKAAYTTVVTDAADWRTKNAAMFTPTPVSG _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 IMIDAZOLE IMD 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 GLY n 1 4 TYR n 1 5 VAL n 1 6 ASN n 1 7 ILE n 1 8 LYS n 1 9 THR n 1 10 PHE n 1 11 THR n 1 12 HIS n 1 13 PRO n 1 14 ALA n 1 15 GLY n 1 16 GLU n 1 17 GLY n 1 18 LYS n 1 19 GLU n 1 20 VAL n 1 21 LYS n 1 22 GLY n 1 23 MET n 1 24 GLU n 1 25 VAL n 1 26 SER n 1 27 VAL n 1 28 PRO n 1 29 PHE n 1 30 GLU n 1 31 ILE n 1 32 TYR n 1 33 SER n 1 34 ASN n 1 35 GLU n 1 36 HIS n 1 37 ARG n 1 38 ILE n 1 39 ALA n 1 40 ASP n 1 41 ALA n 1 42 HIS n 1 43 TYR n 1 44 GLN n 1 45 THR n 1 46 PHE n 1 47 PRO n 1 48 SER n 1 49 GLU n 1 50 LYS n 1 51 ALA n 1 52 ALA n 1 53 TYR n 1 54 THR n 1 55 THR n 1 56 VAL n 1 57 VAL n 1 58 THR n 1 59 ASP n 1 60 ALA n 1 61 ALA n 1 62 ASP n 1 63 TRP n 1 64 ARG n 1 65 THR n 1 66 LYS n 1 67 ASN n 1 68 ALA n 1 69 ALA n 1 70 MET n 1 71 PHE n 1 72 THR n 1 73 PRO n 1 74 THR n 1 75 PRO n 1 76 VAL n 1 77 SER n 1 78 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'Bacteriophage RB69' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene soc _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Enterobacteria phage RB69' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 12353 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type 'T7 expression vector, pET28b' _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IMD non-polymer . IMIDAZOLE ? 'C3 H5 N2 1' 69.085 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 GLY 2 2 2 GLY GLY A . n A 1 3 GLY 3 3 3 GLY GLY A . n A 1 4 TYR 4 4 4 TYR TYR A . n A 1 5 VAL 5 5 5 VAL VAL A . n A 1 6 ASN 6 6 6 ASN ASN A . n A 1 7 ILE 7 7 7 ILE ILE A . n A 1 8 LYS 8 8 8 LYS LYS A . n A 1 9 THR 9 9 9 THR THR A . n A 1 10 PHE 10 10 10 PHE PHE A . n A 1 11 THR 11 11 11 THR THR A . n A 1 12 HIS 12 12 12 HIS HIS A . n A 1 13 PRO 13 13 13 PRO PRO A . n A 1 14 ALA 14 14 14 ALA ALA A . n A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 LYS 18 18 18 LYS LYS A . n A 1 19 GLU 19 19 19 GLU GLU A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 LYS 21 21 21 LYS LYS A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 MET 23 23 23 MET MET A . n A 1 24 GLU 24 24 24 GLU GLU A . n A 1 25 VAL 25 25 25 VAL VAL A . n A 1 26 SER 26 26 26 SER SER A . n A 1 27 VAL 27 27 27 VAL VAL A . n A 1 28 PRO 28 28 28 PRO PRO A . n A 1 29 PHE 29 29 29 PHE PHE A . n A 1 30 GLU 30 30 30 GLU GLU A . n A 1 31 ILE 31 31 31 ILE ILE A . n A 1 32 TYR 32 32 32 TYR TYR A . n A 1 33 SER 33 33 33 SER SER A . n A 1 34 ASN 34 34 34 ASN ASN A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 HIS 36 36 36 HIS HIS A . n A 1 37 ARG 37 37 37 ARG ARG A . n A 1 38 ILE 38 38 38 ILE ILE A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 ASP 40 40 40 ASP ASP A . n A 1 41 ALA 41 41 41 ALA ALA A . n A 1 42 HIS 42 42 42 HIS HIS A . n A 1 43 TYR 43 43 43 TYR TYR A . n A 1 44 GLN 44 44 44 GLN GLN A . n A 1 45 THR 45 45 45 THR THR A . n A 1 46 PHE 46 46 46 PHE PHE A . n A 1 47 PRO 47 47 47 PRO PRO A . n A 1 48 SER 48 48 48 SER SER A . n A 1 49 GLU 49 49 49 GLU GLU A . n A 1 50 LYS 50 50 50 LYS LYS A . n A 1 51 ALA 51 51 51 ALA ALA A . n A 1 52 ALA 52 52 52 ALA ALA A . n A 1 53 TYR 53 53 53 TYR TYR A . n A 1 54 THR 54 54 54 THR THR A . n A 1 55 THR 55 55 55 THR THR A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 VAL 57 57 57 VAL VAL A . n A 1 58 THR 58 58 58 THR THR A . n A 1 59 ASP 59 59 59 ASP ASP A . n A 1 60 ALA 60 60 60 ALA ALA A . n A 1 61 ALA 61 61 61 ALA ALA A . n A 1 62 ASP 62 62 62 ASP ASP A . n A 1 63 TRP 63 63 63 TRP TRP A . n A 1 64 ARG 64 64 64 ARG ARG A . n A 1 65 THR 65 65 65 THR THR A . n A 1 66 LYS 66 66 66 LYS LYS A . n A 1 67 ASN 67 67 67 ASN ASN A . n A 1 68 ALA 68 68 68 ALA ALA A . n A 1 69 ALA 69 69 69 ALA ALA A . n A 1 70 MET 70 70 70 MET MET A . n A 1 71 PHE 71 71 71 PHE PHE A . n A 1 72 THR 72 72 72 THR THR A . n A 1 73 PRO 73 73 73 PRO PRO A . n A 1 74 THR 74 74 74 THR THR A . n A 1 75 PRO 75 75 75 PRO PRO A . n A 1 76 VAL 76 76 76 VAL VAL A . n A 1 77 SER 77 77 ? ? ? A . n A 1 78 GLY 78 78 ? ? ? A . n B 1 1 MET 1 1 ? ? ? B . n B 1 2 GLY 2 2 2 GLY GLY B . n B 1 3 GLY 3 3 3 GLY GLY B . n B 1 4 TYR 4 4 4 TYR TYR B . n B 1 5 VAL 5 5 5 VAL VAL B . n B 1 6 ASN 6 6 6 ASN ASN B . n B 1 7 ILE 7 7 7 ILE ILE B . n B 1 8 LYS 8 8 8 LYS LYS B . n B 1 9 THR 9 9 9 THR THR B . n B 1 10 PHE 10 10 10 PHE PHE B . n B 1 11 THR 11 11 11 THR THR B . n B 1 12 HIS 12 12 12 HIS HIS B . n B 1 13 PRO 13 13 13 PRO PRO B . n B 1 14 ALA 14 14 14 ALA ALA B . n B 1 15 GLY 15 15 15 GLY GLY B . n B 1 16 GLU 16 16 16 GLU GLU B . n B 1 17 GLY 17 17 17 GLY GLY B . n B 1 18 LYS 18 18 18 LYS LYS B . n B 1 19 GLU 19 19 19 GLU GLU B . n B 1 20 VAL 20 20 20 VAL VAL B . n B 1 21 LYS 21 21 21 LYS LYS B . n B 1 22 GLY 22 22 22 GLY GLY B . n B 1 23 MET 23 23 23 MET MET B . n B 1 24 GLU 24 24 24 GLU GLU B . n B 1 25 VAL 25 25 25 VAL VAL B . n B 1 26 SER 26 26 26 SER SER B . n B 1 27 VAL 27 27 27 VAL VAL B . n B 1 28 PRO 28 28 28 PRO PRO B . n B 1 29 PHE 29 29 29 PHE PHE B . n B 1 30 GLU 30 30 30 GLU GLU B . n B 1 31 ILE 31 31 31 ILE ILE B . n B 1 32 TYR 32 32 32 TYR TYR B . n B 1 33 SER 33 33 33 SER SER B . n B 1 34 ASN 34 34 34 ASN ASN B . n B 1 35 GLU 35 35 35 GLU GLU B . n B 1 36 HIS 36 36 36 HIS HIS B . n B 1 37 ARG 37 37 37 ARG ARG B . n B 1 38 ILE 38 38 38 ILE ILE B . n B 1 39 ALA 39 39 39 ALA ALA B . n B 1 40 ASP 40 40 40 ASP ASP B . n B 1 41 ALA 41 41 41 ALA ALA B . n B 1 42 HIS 42 42 42 HIS HIS B . n B 1 43 TYR 43 43 43 TYR TYR B . n B 1 44 GLN 44 44 44 GLN GLN B . n B 1 45 THR 45 45 45 THR THR B . n B 1 46 PHE 46 46 46 PHE PHE B . n B 1 47 PRO 47 47 47 PRO PRO B . n B 1 48 SER 48 48 48 SER SER B . n B 1 49 GLU 49 49 49 GLU GLU B . n B 1 50 LYS 50 50 50 LYS LYS B . n B 1 51 ALA 51 51 51 ALA ALA B . n B 1 52 ALA 52 52 52 ALA ALA B . n B 1 53 TYR 53 53 53 TYR TYR B . n B 1 54 THR 54 54 54 THR THR B . n B 1 55 THR 55 55 55 THR THR B . n B 1 56 VAL 56 56 56 VAL VAL B . n B 1 57 VAL 57 57 57 VAL VAL B . n B 1 58 THR 58 58 58 THR THR B . n B 1 59 ASP 59 59 59 ASP ASP B . n B 1 60 ALA 60 60 60 ALA ALA B . n B 1 61 ALA 61 61 61 ALA ALA B . n B 1 62 ASP 62 62 62 ASP ASP B . n B 1 63 TRP 63 63 63 TRP TRP B . n B 1 64 ARG 64 64 64 ARG ARG B . n B 1 65 THR 65 65 65 THR THR B . n B 1 66 LYS 66 66 66 LYS LYS B . n B 1 67 ASN 67 67 67 ASN ASN B . n B 1 68 ALA 68 68 68 ALA ALA B . n B 1 69 ALA 69 69 69 ALA ALA B . n B 1 70 MET 70 70 70 MET MET B . n B 1 71 PHE 71 71 71 PHE PHE B . n B 1 72 THR 72 72 72 THR THR B . n B 1 73 PRO 73 73 73 PRO PRO B . n B 1 74 THR 74 74 74 THR THR B . n B 1 75 PRO 75 75 75 PRO PRO B . n B 1 76 VAL 76 76 76 VAL VAL B . n B 1 77 SER 77 77 ? ? ? B . n B 1 78 GLY 78 78 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 IMD 1 100 100 IMD IMD A . D 2 IMD 1 101 101 IMD IMD B . E 3 HOH 1 79 2 HOH HOH A . E 3 HOH 2 80 80 HOH HOH A . E 3 HOH 3 81 81 HOH HOH A . E 3 HOH 4 82 3 HOH HOH A . E 3 HOH 5 83 83 HOH HOH A . E 3 HOH 6 84 4 HOH HOH A . E 3 HOH 7 85 5 HOH HOH A . E 3 HOH 8 86 86 HOH HOH A . E 3 HOH 9 87 7 HOH HOH A . E 3 HOH 10 88 9 HOH HOH A . E 3 HOH 11 89 10 HOH HOH A . E 3 HOH 12 90 12 HOH HOH A . E 3 HOH 13 91 13 HOH HOH A . E 3 HOH 14 92 14 HOH HOH A . E 3 HOH 15 93 93 HOH HOH A . E 3 HOH 16 94 94 HOH HOH A . E 3 HOH 17 95 15 HOH HOH A . E 3 HOH 18 96 96 HOH HOH A . E 3 HOH 19 97 97 HOH HOH A . E 3 HOH 20 98 98 HOH HOH A . E 3 HOH 21 99 99 HOH HOH A . E 3 HOH 22 101 101 HOH HOH A . E 3 HOH 23 102 18 HOH HOH A . E 3 HOH 24 103 103 HOH HOH A . E 3 HOH 25 104 104 HOH HOH A . E 3 HOH 26 105 105 HOH HOH A . E 3 HOH 27 106 19 HOH HOH A . E 3 HOH 28 107 107 HOH HOH A . E 3 HOH 29 108 20 HOH HOH A . E 3 HOH 30 109 21 HOH HOH A . E 3 HOH 31 110 25 HOH HOH A . E 3 HOH 32 111 28 HOH HOH A . E 3 HOH 33 112 112 HOH HOH A . E 3 HOH 34 113 113 HOH HOH A . E 3 HOH 35 114 30 HOH HOH A . E 3 HOH 36 115 31 HOH HOH A . E 3 HOH 37 116 116 HOH HOH A . E 3 HOH 38 117 32 HOH HOH A . E 3 HOH 39 118 118 HOH HOH A . E 3 HOH 40 119 119 HOH HOH A . E 3 HOH 41 120 120 HOH HOH A . E 3 HOH 42 121 36 HOH HOH A . E 3 HOH 43 122 37 HOH HOH A . E 3 HOH 44 123 38 HOH HOH A . E 3 HOH 45 124 41 HOH HOH A . E 3 HOH 46 125 42 HOH HOH A . E 3 HOH 47 126 44 HOH HOH A . E 3 HOH 48 127 45 HOH HOH A . E 3 HOH 49 128 49 HOH HOH A . E 3 HOH 50 129 50 HOH HOH A . E 3 HOH 51 130 52 HOH HOH A . E 3 HOH 52 131 53 HOH HOH A . E 3 HOH 53 132 55 HOH HOH A . E 3 HOH 54 133 56 HOH HOH A . E 3 HOH 55 134 59 HOH HOH A . E 3 HOH 56 135 61 HOH HOH A . E 3 HOH 57 136 62 HOH HOH A . E 3 HOH 58 137 63 HOH HOH A . E 3 HOH 59 138 67 HOH HOH A . E 3 HOH 60 139 70 HOH HOH A . E 3 HOH 61 140 71 HOH HOH A . E 3 HOH 62 141 72 HOH HOH A . E 3 HOH 63 142 76 HOH HOH A . E 3 HOH 64 143 82 HOH HOH A . E 3 HOH 65 144 77 HOH HOH A . F 3 HOH 1 79 79 HOH HOH B . F 3 HOH 2 80 1 HOH HOH B . F 3 HOH 3 81 6 HOH HOH B . F 3 HOH 4 83 8 HOH HOH B . F 3 HOH 5 84 84 HOH HOH B . F 3 HOH 6 85 85 HOH HOH B . F 3 HOH 7 86 11 HOH HOH B . F 3 HOH 8 87 87 HOH HOH B . F 3 HOH 9 88 88 HOH HOH B . F 3 HOH 10 89 89 HOH HOH B . F 3 HOH 11 90 90 HOH HOH B . F 3 HOH 12 91 91 HOH HOH B . F 3 HOH 13 92 92 HOH HOH B . F 3 HOH 14 93 16 HOH HOH B . F 3 HOH 15 94 17 HOH HOH B . F 3 HOH 16 95 95 HOH HOH B . F 3 HOH 17 96 22 HOH HOH B . F 3 HOH 18 97 23 HOH HOH B . F 3 HOH 19 98 24 HOH HOH B . F 3 HOH 20 99 26 HOH HOH B . F 3 HOH 21 100 100 HOH HOH B . F 3 HOH 22 102 102 HOH HOH B . F 3 HOH 23 103 27 HOH HOH B . F 3 HOH 24 104 29 HOH HOH B . F 3 HOH 25 105 33 HOH HOH B . F 3 HOH 26 106 106 HOH HOH B . F 3 HOH 27 107 34 HOH HOH B . F 3 HOH 28 108 108 HOH HOH B . F 3 HOH 29 109 109 HOH HOH B . F 3 HOH 30 110 110 HOH HOH B . F 3 HOH 31 111 111 HOH HOH B . F 3 HOH 32 112 35 HOH HOH B . F 3 HOH 33 113 39 HOH HOH B . F 3 HOH 34 114 114 HOH HOH B . F 3 HOH 35 115 115 HOH HOH B . F 3 HOH 36 116 40 HOH HOH B . F 3 HOH 37 117 117 HOH HOH B . F 3 HOH 38 118 43 HOH HOH B . F 3 HOH 39 119 46 HOH HOH B . F 3 HOH 40 120 47 HOH HOH B . F 3 HOH 41 121 48 HOH HOH B . F 3 HOH 42 122 51 HOH HOH B . F 3 HOH 43 123 54 HOH HOH B . F 3 HOH 44 124 57 HOH HOH B . F 3 HOH 45 125 58 HOH HOH B . F 3 HOH 46 126 60 HOH HOH B . F 3 HOH 47 127 64 HOH HOH B . F 3 HOH 48 128 65 HOH HOH B . F 3 HOH 49 129 66 HOH HOH B . F 3 HOH 50 130 68 HOH HOH B . F 3 HOH 51 131 69 HOH HOH B . F 3 HOH 52 132 73 HOH HOH B . F 3 HOH 53 133 74 HOH HOH B . F 3 HOH 54 134 75 HOH HOH B . F 3 HOH 55 136 78 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MOLREP phasing . ? 1 PHENIX refinement '(phenix.refine)' ? 2 HKL-2000 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 # _cell.entry_id 3IGE _cell.length_a 39.220 _cell.length_b 88.613 _cell.length_c 81.944 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3IGE _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3IGE _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.08 _exptl_crystal.density_percent_sol 40.82 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8 _exptl_crystal_grow.pdbx_details '30% PEG 8000; 0.1 M imidazole; 0.2 M NaCl., VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV++' _diffrn_detector.pdbx_collection_date 2008-04-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type RIGAKU _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.54 # _reflns.entry_id 3IGE _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 23.6 _reflns.d_resolution_high 2.54 _reflns.number_obs 7033 _reflns.number_all ? _reflns.percent_possible_obs 99.6 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.058 _reflns.pdbx_netI_over_sigmaI 21.2 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.4 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 3IGE _refine.ls_number_reflns_obs 7023 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 23.595 _refine.ls_d_res_high 2.254 _refine.ls_percent_reflns_obs 99.67 _refine.ls_R_factor_obs 0.2189 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2169 _refine.ls_R_factor_R_free 0.2627 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.76 _refine.ls_number_reflns_R_free 334 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.316 _refine.solvent_model_param_bsol 40.408 _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'structure of the Soc protein from bacteriophage RB69 (hexagonal crystal form).' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.38 _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1168 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 10 _refine_hist.number_atoms_solvent 120 _refine_hist.number_atoms_total 1298 _refine_hist.d_res_high 2.254 _refine_hist.d_res_low 23.595 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.002 ? ? 1212 'X-RAY DIFFRACTION' ? f_angle_d 0.421 ? ? 1648 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 11.300 ? ? 414 'X-RAY DIFFRACTION' ? f_chiral_restr 0.030 ? ? 178 'X-RAY DIFFRACTION' ? f_plane_restr 0.003 ? ? 214 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 2.2545 2.8396 3286 0.2559 100.00 0.3513 . . 167 . . . . 'X-RAY DIFFRACTION' . 2.8396 23.5959 3403 0.1976 100.00 0.2235 . . 167 . . . . 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3IGE _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3IGE _struct.title 'Small outer capsid protein (Soc) from bacteriophage RB69' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3IGE _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' _struct_keywords.text 'Alpha/Beta protein, VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q7Y5B1_BPR69 _struct_ref.pdbx_db_accession Q7Y5B1 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code MGGYVNIKTFTHPAGEGKEVKGMEVSVPFEIYSNEHRIADAHYQTFPSEKAAYTTVVTDAADWRTKNAAMFTPTPVSG _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3IGE A 1 ? 78 ? Q7Y5B1 1 ? 78 ? 1 78 2 1 3IGE B 1 ? 78 ? Q7Y5B1 1 ? 78 ? 1 78 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,E 2 1 B,D,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details 'Authors state that the protein forms trimers in virus but is monomer in solution.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PHE A 29 ? GLU A 35 ? PHE A 29 GLU A 35 1 ? 7 HELX_P HELX_P2 2 ASP A 59 ? ALA A 69 ? ASP A 59 ALA A 69 1 ? 11 HELX_P HELX_P3 3 PHE B 29 ? GLU B 35 ? PHE B 29 GLU B 35 1 ? 7 HELX_P HELX_P4 4 ASP B 59 ? MET B 70 ? ASP B 59 MET B 70 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 3 ? C ? 4 ? D ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 43 ? SER A 48 ? TYR A 43 SER A 48 A 2 TYR A 4 ? THR A 9 ? TYR A 4 THR A 9 A 3 MET A 23 ? PRO A 28 ? MET A 23 PRO A 28 A 4 THR A 55 ? VAL A 56 ? THR A 55 VAL A 56 B 1 HIS A 12 ? PRO A 13 ? HIS A 12 PRO A 13 B 2 LYS A 18 ? VAL A 20 ? LYS A 18 VAL A 20 B 3 THR A 74 ? PRO A 75 ? THR A 74 PRO A 75 C 1 TYR B 43 ? SER B 48 ? TYR B 43 SER B 48 C 2 TYR B 4 ? THR B 9 ? TYR B 4 THR B 9 C 3 GLU B 24 ? PRO B 28 ? GLU B 24 PRO B 28 C 4 THR B 55 ? VAL B 56 ? THR B 55 VAL B 56 D 1 HIS B 12 ? PRO B 13 ? HIS B 12 PRO B 13 D 2 LYS B 18 ? VAL B 20 ? LYS B 18 VAL B 20 D 3 THR B 74 ? PRO B 75 ? THR B 74 PRO B 75 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O SER A 48 ? O SER A 48 N TYR A 4 ? N TYR A 4 A 2 3 N VAL A 5 ? N VAL A 5 O VAL A 27 ? O VAL A 27 A 3 4 N SER A 26 ? N SER A 26 O THR A 55 ? O THR A 55 B 1 2 N HIS A 12 ? N HIS A 12 O VAL A 20 ? O VAL A 20 B 2 3 N GLU A 19 ? N GLU A 19 O THR A 74 ? O THR A 74 C 1 2 O SER B 48 ? O SER B 48 N TYR B 4 ? N TYR B 4 C 2 3 N ILE B 7 ? N ILE B 7 O VAL B 25 ? O VAL B 25 C 3 4 N SER B 26 ? N SER B 26 O THR B 55 ? O THR B 55 D 1 2 N HIS B 12 ? N HIS B 12 O VAL B 20 ? O VAL B 20 D 2 3 N GLU B 19 ? N GLU B 19 O THR B 74 ? O THR B 74 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A IMD 100 ? 5 'BINDING SITE FOR RESIDUE IMD A 100' AC2 Software B IMD 101 ? 5 'BINDING SITE FOR RESIDUE IMD B 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 TYR A 32 ? TYR A 32 . ? 1_555 ? 2 AC1 5 ARG A 37 ? ARG A 37 . ? 1_555 ? 3 AC1 5 TYR A 43 ? TYR A 43 . ? 1_555 ? 4 AC1 5 MET A 70 ? MET A 70 . ? 1_555 ? 5 AC1 5 HOH E . ? HOH A 109 . ? 1_555 ? 6 AC2 5 TYR B 32 ? TYR B 32 . ? 1_555 ? 7 AC2 5 ARG B 37 ? ARG B 37 . ? 1_555 ? 8 AC2 5 ILE B 38 ? ILE B 38 . ? 1_555 ? 9 AC2 5 TYR B 43 ? TYR B 43 . ? 1_555 ? 10 AC2 5 HOH F . ? HOH B 128 . ? 1_555 ? # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ALA _pdbx_validate_torsion.auth_asym_id B _pdbx_validate_torsion.auth_seq_id 14 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -117.34 _pdbx_validate_torsion.psi 61.27 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -8.3400 40.8117 11.6614 0.2889 0.1479 0.1238 -0.0268 -0.0446 -0.0119 2.2342 2.3718 1.0355 0.2625 0.8136 1.1673 0.2301 0.0658 -0.1947 -0.1277 -0.1324 -0.0603 0.4588 -0.1272 -0.0870 'X-RAY DIFFRACTION' 2 ? ? ? ? ? 0.1872 0.1095 0.1249 -0.0161 0.0488 0.0547 2.6361 0.5894 3.6751 0.1321 -1.7101 -0.2477 0.5028 0.1481 0.3807 -0.1109 -0.1821 0.1512 -0.4247 -0.1710 -0.3228 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details 'chain B' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A SER 77 ? A SER 77 3 1 Y 1 A GLY 78 ? A GLY 78 4 1 Y 1 B MET 1 ? B MET 1 5 1 Y 1 B SER 77 ? B SER 77 6 1 Y 1 B GLY 78 ? B GLY 78 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 IMD N1 N Y N 169 IMD C2 C Y N 170 IMD N3 N Y N 171 IMD C4 C Y N 172 IMD C5 C Y N 173 IMD HN1 H N N 174 IMD H2 H N N 175 IMD HN3 H N N 176 IMD H4 H N N 177 IMD H5 H N N 178 LYS N N N N 179 LYS CA C N S 180 LYS C C N N 181 LYS O O N N 182 LYS CB C N N 183 LYS CG C N N 184 LYS CD C N N 185 LYS CE C N N 186 LYS NZ N N N 187 LYS OXT O N N 188 LYS H H N N 189 LYS H2 H N N 190 LYS HA H N N 191 LYS HB2 H N N 192 LYS HB3 H N N 193 LYS HG2 H N N 194 LYS HG3 H N N 195 LYS HD2 H N N 196 LYS HD3 H N N 197 LYS HE2 H N N 198 LYS HE3 H N N 199 LYS HZ1 H N N 200 LYS HZ2 H N N 201 LYS HZ3 H N N 202 LYS HXT H N N 203 MET N N N N 204 MET CA C N S 205 MET C C N N 206 MET O O N N 207 MET CB C N N 208 MET CG C N N 209 MET SD S N N 210 MET CE C N N 211 MET OXT O N N 212 MET H H N N 213 MET H2 H N N 214 MET HA H N N 215 MET HB2 H N N 216 MET HB3 H N N 217 MET HG2 H N N 218 MET HG3 H N N 219 MET HE1 H N N 220 MET HE2 H N N 221 MET HE3 H N N 222 MET HXT H N N 223 PHE N N N N 224 PHE CA C N S 225 PHE C C N N 226 PHE O O N N 227 PHE CB C N N 228 PHE CG C Y N 229 PHE CD1 C Y N 230 PHE CD2 C Y N 231 PHE CE1 C Y N 232 PHE CE2 C Y N 233 PHE CZ C Y N 234 PHE OXT O N N 235 PHE H H N N 236 PHE H2 H N N 237 PHE HA H N N 238 PHE HB2 H N N 239 PHE HB3 H N N 240 PHE HD1 H N N 241 PHE HD2 H N N 242 PHE HE1 H N N 243 PHE HE2 H N N 244 PHE HZ H N N 245 PHE HXT H N N 246 PRO N N N N 247 PRO CA C N S 248 PRO C C N N 249 PRO O O N N 250 PRO CB C N N 251 PRO CG C N N 252 PRO CD C N N 253 PRO OXT O N N 254 PRO H H N N 255 PRO HA H N N 256 PRO HB2 H N N 257 PRO HB3 H N N 258 PRO HG2 H N N 259 PRO HG3 H N N 260 PRO HD2 H N N 261 PRO HD3 H N N 262 PRO HXT H N N 263 SER N N N N 264 SER CA C N S 265 SER C C N N 266 SER O O N N 267 SER CB C N N 268 SER OG O N N 269 SER OXT O N N 270 SER H H N N 271 SER H2 H N N 272 SER HA H N N 273 SER HB2 H N N 274 SER HB3 H N N 275 SER HG H N N 276 SER HXT H N N 277 THR N N N N 278 THR CA C N S 279 THR C C N N 280 THR O O N N 281 THR CB C N R 282 THR OG1 O N N 283 THR CG2 C N N 284 THR OXT O N N 285 THR H H N N 286 THR H2 H N N 287 THR HA H N N 288 THR HB H N N 289 THR HG1 H N N 290 THR HG21 H N N 291 THR HG22 H N N 292 THR HG23 H N N 293 THR HXT H N N 294 TRP N N N N 295 TRP CA C N S 296 TRP C C N N 297 TRP O O N N 298 TRP CB C N N 299 TRP CG C Y N 300 TRP CD1 C Y N 301 TRP CD2 C Y N 302 TRP NE1 N Y N 303 TRP CE2 C Y N 304 TRP CE3 C Y N 305 TRP CZ2 C Y N 306 TRP CZ3 C Y N 307 TRP CH2 C Y N 308 TRP OXT O N N 309 TRP H H N N 310 TRP H2 H N N 311 TRP HA H N N 312 TRP HB2 H N N 313 TRP HB3 H N N 314 TRP HD1 H N N 315 TRP HE1 H N N 316 TRP HE3 H N N 317 TRP HZ2 H N N 318 TRP HZ3 H N N 319 TRP HH2 H N N 320 TRP HXT H N N 321 TYR N N N N 322 TYR CA C N S 323 TYR C C N N 324 TYR O O N N 325 TYR CB C N N 326 TYR CG C Y N 327 TYR CD1 C Y N 328 TYR CD2 C Y N 329 TYR CE1 C Y N 330 TYR CE2 C Y N 331 TYR CZ C Y N 332 TYR OH O N N 333 TYR OXT O N N 334 TYR H H N N 335 TYR H2 H N N 336 TYR HA H N N 337 TYR HB2 H N N 338 TYR HB3 H N N 339 TYR HD1 H N N 340 TYR HD2 H N N 341 TYR HE1 H N N 342 TYR HE2 H N N 343 TYR HH H N N 344 TYR HXT H N N 345 VAL N N N N 346 VAL CA C N S 347 VAL C C N N 348 VAL O O N N 349 VAL CB C N N 350 VAL CG1 C N N 351 VAL CG2 C N N 352 VAL OXT O N N 353 VAL H H N N 354 VAL H2 H N N 355 VAL HA H N N 356 VAL HB H N N 357 VAL HG11 H N N 358 VAL HG12 H N N 359 VAL HG13 H N N 360 VAL HG21 H N N 361 VAL HG22 H N N 362 VAL HG23 H N N 363 VAL HXT H N N 364 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 IMD N1 C2 sing Y N 160 IMD N1 C5 sing Y N 161 IMD N1 HN1 sing N N 162 IMD C2 N3 doub Y N 163 IMD C2 H2 sing N N 164 IMD N3 C4 sing Y N 165 IMD N3 HN3 sing N N 166 IMD C4 C5 doub Y N 167 IMD C4 H4 sing N N 168 IMD C5 H5 sing N N 169 LYS N CA sing N N 170 LYS N H sing N N 171 LYS N H2 sing N N 172 LYS CA C sing N N 173 LYS CA CB sing N N 174 LYS CA HA sing N N 175 LYS C O doub N N 176 LYS C OXT sing N N 177 LYS CB CG sing N N 178 LYS CB HB2 sing N N 179 LYS CB HB3 sing N N 180 LYS CG CD sing N N 181 LYS CG HG2 sing N N 182 LYS CG HG3 sing N N 183 LYS CD CE sing N N 184 LYS CD HD2 sing N N 185 LYS CD HD3 sing N N 186 LYS CE NZ sing N N 187 LYS CE HE2 sing N N 188 LYS CE HE3 sing N N 189 LYS NZ HZ1 sing N N 190 LYS NZ HZ2 sing N N 191 LYS NZ HZ3 sing N N 192 LYS OXT HXT sing N N 193 MET N CA sing N N 194 MET N H sing N N 195 MET N H2 sing N N 196 MET CA C sing N N 197 MET CA CB sing N N 198 MET CA HA sing N N 199 MET C O doub N N 200 MET C OXT sing N N 201 MET CB CG sing N N 202 MET CB HB2 sing N N 203 MET CB HB3 sing N N 204 MET CG SD sing N N 205 MET CG HG2 sing N N 206 MET CG HG3 sing N N 207 MET SD CE sing N N 208 MET CE HE1 sing N N 209 MET CE HE2 sing N N 210 MET CE HE3 sing N N 211 MET OXT HXT sing N N 212 PHE N CA sing N N 213 PHE N H sing N N 214 PHE N H2 sing N N 215 PHE CA C sing N N 216 PHE CA CB sing N N 217 PHE CA HA sing N N 218 PHE C O doub N N 219 PHE C OXT sing N N 220 PHE CB CG sing N N 221 PHE CB HB2 sing N N 222 PHE CB HB3 sing N N 223 PHE CG CD1 doub Y N 224 PHE CG CD2 sing Y N 225 PHE CD1 CE1 sing Y N 226 PHE CD1 HD1 sing N N 227 PHE CD2 CE2 doub Y N 228 PHE CD2 HD2 sing N N 229 PHE CE1 CZ doub Y N 230 PHE CE1 HE1 sing N N 231 PHE CE2 CZ sing Y N 232 PHE CE2 HE2 sing N N 233 PHE CZ HZ sing N N 234 PHE OXT HXT sing N N 235 PRO N CA sing N N 236 PRO N CD sing N N 237 PRO N H sing N N 238 PRO CA C sing N N 239 PRO CA CB sing N N 240 PRO CA HA sing N N 241 PRO C O doub N N 242 PRO C OXT sing N N 243 PRO CB CG sing N N 244 PRO CB HB2 sing N N 245 PRO CB HB3 sing N N 246 PRO CG CD sing N N 247 PRO CG HG2 sing N N 248 PRO CG HG3 sing N N 249 PRO CD HD2 sing N N 250 PRO CD HD3 sing N N 251 PRO OXT HXT sing N N 252 SER N CA sing N N 253 SER N H sing N N 254 SER N H2 sing N N 255 SER CA C sing N N 256 SER CA CB sing N N 257 SER CA HA sing N N 258 SER C O doub N N 259 SER C OXT sing N N 260 SER CB OG sing N N 261 SER CB HB2 sing N N 262 SER CB HB3 sing N N 263 SER OG HG sing N N 264 SER OXT HXT sing N N 265 THR N CA sing N N 266 THR N H sing N N 267 THR N H2 sing N N 268 THR CA C sing N N 269 THR CA CB sing N N 270 THR CA HA sing N N 271 THR C O doub N N 272 THR C OXT sing N N 273 THR CB OG1 sing N N 274 THR CB CG2 sing N N 275 THR CB HB sing N N 276 THR OG1 HG1 sing N N 277 THR CG2 HG21 sing N N 278 THR CG2 HG22 sing N N 279 THR CG2 HG23 sing N N 280 THR OXT HXT sing N N 281 TRP N CA sing N N 282 TRP N H sing N N 283 TRP N H2 sing N N 284 TRP CA C sing N N 285 TRP CA CB sing N N 286 TRP CA HA sing N N 287 TRP C O doub N N 288 TRP C OXT sing N N 289 TRP CB CG sing N N 290 TRP CB HB2 sing N N 291 TRP CB HB3 sing N N 292 TRP CG CD1 doub Y N 293 TRP CG CD2 sing Y N 294 TRP CD1 NE1 sing Y N 295 TRP CD1 HD1 sing N N 296 TRP CD2 CE2 doub Y N 297 TRP CD2 CE3 sing Y N 298 TRP NE1 CE2 sing Y N 299 TRP NE1 HE1 sing N N 300 TRP CE2 CZ2 sing Y N 301 TRP CE3 CZ3 doub Y N 302 TRP CE3 HE3 sing N N 303 TRP CZ2 CH2 doub Y N 304 TRP CZ2 HZ2 sing N N 305 TRP CZ3 CH2 sing Y N 306 TRP CZ3 HZ3 sing N N 307 TRP CH2 HH2 sing N N 308 TRP OXT HXT sing N N 309 TYR N CA sing N N 310 TYR N H sing N N 311 TYR N H2 sing N N 312 TYR CA C sing N N 313 TYR CA CB sing N N 314 TYR CA HA sing N N 315 TYR C O doub N N 316 TYR C OXT sing N N 317 TYR CB CG sing N N 318 TYR CB HB2 sing N N 319 TYR CB HB3 sing N N 320 TYR CG CD1 doub Y N 321 TYR CG CD2 sing Y N 322 TYR CD1 CE1 sing Y N 323 TYR CD1 HD1 sing N N 324 TYR CD2 CE2 doub Y N 325 TYR CD2 HD2 sing N N 326 TYR CE1 CZ doub Y N 327 TYR CE1 HE1 sing N N 328 TYR CE2 CZ sing Y N 329 TYR CE2 HE2 sing N N 330 TYR CZ OH sing N N 331 TYR OH HH sing N N 332 TYR OXT HXT sing N N 333 VAL N CA sing N N 334 VAL N H sing N N 335 VAL N H2 sing N N 336 VAL CA C sing N N 337 VAL CA CB sing N N 338 VAL CA HA sing N N 339 VAL C O doub N N 340 VAL C OXT sing N N 341 VAL CB CG1 sing N N 342 VAL CB CG2 sing N N 343 VAL CB HB sing N N 344 VAL CG1 HG11 sing N N 345 VAL CG1 HG12 sing N N 346 VAL CG1 HG13 sing N N 347 VAL CG2 HG21 sing N N 348 VAL CG2 HG22 sing N N 349 VAL CG2 HG23 sing N N 350 VAL OXT HXT sing N N 351 # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.details 'structure of the Soc protein from bacteriophage RB69 (hexagonal crystal form).' # _atom_sites.entry_id 3IGE _atom_sites.fract_transf_matrix[1][1] 0.025497 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011285 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012203 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_