HEADER HYDROLASE 31-JUL-09 3IIC TITLE CRYSTAL STRUCTURE OF CHEC-LIKE SUPERFAMILY PROTEIN (YP_001095400.1) TITLE 2 FROM SHEWANELLA SP. PV-4 AT 2.13 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHEC DOMAIN PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SHEWANELLA LOIHICA PV-4; SOURCE 3 ORGANISM_TAXID: 323850; SOURCE 4 ATCC: BAA-1088 / PV-4; SOURCE 5 GENE: SHEW_3275, YP_001095400.1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS YP_001095400.1, CHEC-LIKE SUPERFAMILY PROTEIN, STRUCTURAL GENOMICS, KEYWDS 2 JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE KEYWDS 3 INITIATIVE, PSI-2, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 6 16-OCT-24 3IIC 1 REMARK REVDAT 5 01-FEB-23 3IIC 1 REMARK SEQADV REVDAT 4 24-JUL-19 3IIC 1 REMARK LINK REVDAT 3 01-NOV-17 3IIC 1 REMARK REVDAT 2 13-JUL-11 3IIC 1 VERSN REVDAT 1 18-AUG-09 3IIC 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF CHEC-LIKE SUPERFAMILY PROTEIN JRNL TITL 2 (YP_001095400.1) FROM SHEWANELLA SP. PV-4 AT 2.13 A JRNL TITL 3 RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.13 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0053 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.13 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.56 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 17733 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 907 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.13 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.19 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1234 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.31 REMARK 3 BIN R VALUE (WORKING SET) : 0.3190 REMARK 3 BIN FREE R VALUE SET COUNT : 69 REMARK 3 BIN FREE R VALUE : 0.3370 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2298 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 39 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 36.72 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.65 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.54000 REMARK 3 B22 (A**2) : -2.24000 REMARK 3 B33 (A**2) : -2.30000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.259 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.209 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.191 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 17.136 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.935 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2365 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1551 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3202 ; 1.722 ; 1.997 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3878 ; 1.301 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 316 ; 4.026 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 88 ;29.258 ;27.500 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 434 ;12.084 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 378 ; 0.099 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2619 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 389 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1539 ; 0.513 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 635 ; 0.141 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2489 ; 0.943 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 826 ; 1.718 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 708 ; 2.528 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 3 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 1 A 72 4 REMARK 3 1 B 1 B 72 4 REMARK 3 2 A 73 A 76 6 REMARK 3 2 B 73 B 76 6 REMARK 3 3 A 77 A 154 4 REMARK 3 3 B 77 B 154 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 1770 ; 0.390 ; 0.500 REMARK 3 LOOSE POSITIONAL 1 A (A): 49 ; 1.170 ; 5.000 REMARK 3 MEDIUM THERMAL 1 A (A**2): 1770 ; 0.800 ; 2.000 REMARK 3 LOOSE THERMAL 1 A (A**2): 49 ; 1.640 ;10.000 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 154 REMARK 3 ORIGIN FOR THE GROUP (A): 44.7284 28.2646 39.4935 REMARK 3 T TENSOR REMARK 3 T11: 0.0289 T22: 0.0587 REMARK 3 T33: 0.0685 T12: -0.0069 REMARK 3 T13: 0.0177 T23: 0.0323 REMARK 3 L TENSOR REMARK 3 L11: 1.1125 L22: 4.5447 REMARK 3 L33: 3.7096 L12: -0.2056 REMARK 3 L13: -0.3620 L23: 1.6175 REMARK 3 S TENSOR REMARK 3 S11: 0.0459 S12: -0.0128 S13: -0.0871 REMARK 3 S21: -0.2554 S22: 0.0025 S23: -0.3775 REMARK 3 S31: -0.2976 S32: 0.1931 S33: -0.0484 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 154 REMARK 3 ORIGIN FOR THE GROUP (A): 34.7965 27.6003 60.0859 REMARK 3 T TENSOR REMARK 3 T11: 0.2143 T22: 0.1347 REMARK 3 T33: 0.0927 T12: -0.0353 REMARK 3 T13: 0.0498 T23: 0.0402 REMARK 3 L TENSOR REMARK 3 L11: 3.3877 L22: 3.7033 REMARK 3 L33: 4.0127 L12: -1.1392 REMARK 3 L13: -0.6997 L23: 0.4368 REMARK 3 S TENSOR REMARK 3 S11: -0.0333 S12: -0.2336 S13: -0.2591 REMARK 3 S21: 0.7718 S22: -0.0342 S23: 0.3199 REMARK 3 S31: 0.4400 S32: -0.0921 S33: 0.0675 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2. ATOM RECORDS CONTAIN RESIDUAL B FACTORS REMARK 3 ONLY. 3. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE REMARK 3 INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE REMARK 3 ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED REMARK 3 SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4. ETHYLENE REMARK 3 GLYCOL, USED AS A CRYOPROTECTANT IS MODELED. REMARK 4 REMARK 4 3IIC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-AUG-09. REMARK 100 THE DEPOSITION ID IS D_1000054447. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-APR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97795 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(111) BENT REMARK 200 MONOCHROMATOR (HORIZONTAL REMARK 200 FOCUSING) REMARK 200 OPTICS : FLAT MIRROR (VERTICAL FOCUSING) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17765 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.130 REMARK 200 RESOLUTION RANGE LOW (A) : 48.564 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 3.940 REMARK 200 R MERGE (I) : 0.07300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.8800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.13 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.56400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX, SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2000M K2HPO4, 20.0000% PEG-3350, NO REMARK 280 BUFFER PH 9.2, NANODROP, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 21.82300 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 67.21450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 26.03750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 67.21450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.82300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 26.03750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: CRYSTAL PACKING ANALYSIS SUGGESTS THE ASSIGNMENT OF A DIMER REMARK 300 AS THE SIGNIFICANT OLIGOMERIZATION STATE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2620 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 GLY B 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 18 CE NZ REMARK 470 LYS A 26 NZ REMARK 470 GLN A 52 CG CD OE1 NE2 REMARK 470 LYS A 77 CE NZ REMARK 470 LYS A 122 CD CE NZ REMARK 470 GLN A 133 CG CD OE1 NE2 REMARK 470 LYS B 18 CG CD CE NZ REMARK 470 GLU B 24 CG CD OE1 OE2 REMARK 470 LYS B 29 CD CE NZ REMARK 470 LEU B 32 CG CD1 CD2 REMARK 470 LYS B 33 CG CD CE NZ REMARK 470 LYS B 34 CG CD CE NZ REMARK 470 LYS B 72 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 35 -168.97 -115.51 REMARK 500 GLU A 79 -44.56 75.15 REMARK 500 ASP A 82 -169.12 -115.52 REMARK 500 LYS B 33 28.90 -155.43 REMARK 500 LYS B 34 121.85 -179.40 REMARK 500 GLU B 79 -49.31 81.21 REMARK 500 ASP B 82 -168.32 -122.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 155 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 394125 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THIS CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING REMARK 999 ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 3IIC A 1 154 UNP A3QI43 A3QI43_SHELP 1 154 DBREF 3IIC B 1 154 UNP A3QI43 A3QI43_SHELP 1 154 SEQADV 3IIC GLY A 0 UNP A3QI43 EXPRESSION TAG SEQADV 3IIC GLY B 0 UNP A3QI43 EXPRESSION TAG SEQRES 1 A 155 GLY MSE ASN VAL ASP PHE ILE ASN PRO PHE LEU ASP SER SEQRES 2 A 155 LEU LEU ASN VAL LEU LYS THR MSE ALA ASN MSE GLU LEU SEQRES 3 A 155 LYS PRO GLY LYS PRO ASN LEU LYS LYS ASP ASN LEU ALA SEQRES 4 A 155 LYS GLY ASP VAL SER GLY LEU ILE GLY MSE VAL GLY PRO SEQRES 5 A 155 GLN THR LYS GLY SER LEU SER ILE THR PHE GLU GLU THR SEQRES 6 A 155 LEU ILE LEU GLU ILE MSE ASN LYS MSE LEU GLY GLU LYS SEQRES 7 A 155 PRO GLU SER ILE ASP GLU GLU VAL THR ASP LEU VAL GLY SEQRES 8 A 155 GLU LEU THR ASN MSE VAL THR GLY GLY ALA LYS ASN LEU SEQRES 9 A 155 LEU SER ASP LYS GLY TYR GLU PHE ASP MSE ALA THR PRO SEQRES 10 A 155 ILE VAL VAL SER GLY LYS ASN HIS THR ILE ALA HIS LYS SEQRES 11 A 155 SER ASP GLY GLN LYS ILE ILE MSE PRO PHE SER SER ILE SEQRES 12 A 155 TYR GLY THR ALA TYR ILE GLU ILE CYS PHE GLU GLY SEQRES 1 B 155 GLY MSE ASN VAL ASP PHE ILE ASN PRO PHE LEU ASP SER SEQRES 2 B 155 LEU LEU ASN VAL LEU LYS THR MSE ALA ASN MSE GLU LEU SEQRES 3 B 155 LYS PRO GLY LYS PRO ASN LEU LYS LYS ASP ASN LEU ALA SEQRES 4 B 155 LYS GLY ASP VAL SER GLY LEU ILE GLY MSE VAL GLY PRO SEQRES 5 B 155 GLN THR LYS GLY SER LEU SER ILE THR PHE GLU GLU THR SEQRES 6 B 155 LEU ILE LEU GLU ILE MSE ASN LYS MSE LEU GLY GLU LYS SEQRES 7 B 155 PRO GLU SER ILE ASP GLU GLU VAL THR ASP LEU VAL GLY SEQRES 8 B 155 GLU LEU THR ASN MSE VAL THR GLY GLY ALA LYS ASN LEU SEQRES 9 B 155 LEU SER ASP LYS GLY TYR GLU PHE ASP MSE ALA THR PRO SEQRES 10 B 155 ILE VAL VAL SER GLY LYS ASN HIS THR ILE ALA HIS LYS SEQRES 11 B 155 SER ASP GLY GLN LYS ILE ILE MSE PRO PHE SER SER ILE SEQRES 12 B 155 TYR GLY THR ALA TYR ILE GLU ILE CYS PHE GLU GLY MODRES 3IIC MSE A 1 MET SELENOMETHIONINE MODRES 3IIC MSE A 20 MET SELENOMETHIONINE MODRES 3IIC MSE A 23 MET SELENOMETHIONINE MODRES 3IIC MSE A 48 MET SELENOMETHIONINE MODRES 3IIC MSE A 70 MET SELENOMETHIONINE MODRES 3IIC MSE A 73 MET SELENOMETHIONINE MODRES 3IIC MSE A 95 MET SELENOMETHIONINE MODRES 3IIC MSE A 113 MET SELENOMETHIONINE MODRES 3IIC MSE A 137 MET SELENOMETHIONINE MODRES 3IIC MSE B 1 MET SELENOMETHIONINE MODRES 3IIC MSE B 20 MET SELENOMETHIONINE MODRES 3IIC MSE B 23 MET SELENOMETHIONINE MODRES 3IIC MSE B 48 MET SELENOMETHIONINE MODRES 3IIC MSE B 70 MET SELENOMETHIONINE MODRES 3IIC MSE B 73 MET SELENOMETHIONINE MODRES 3IIC MSE B 95 MET SELENOMETHIONINE MODRES 3IIC MSE B 113 MET SELENOMETHIONINE MODRES 3IIC MSE B 137 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 20 8 HET MSE A 23 8 HET MSE A 48 8 HET MSE A 70 8 HET MSE A 73 8 HET MSE A 95 8 HET MSE A 113 8 HET MSE A 137 8 HET MSE B 1 8 HET MSE B 20 8 HET MSE B 23 8 HET MSE B 48 8 HET MSE B 70 13 HET MSE B 73 8 HET MSE B 95 8 HET MSE B 113 8 HET MSE B 137 8 HET EDO A 155 4 HETNAM MSE SELENOMETHIONINE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 18(C5 H11 N O2 SE) FORMUL 3 EDO C2 H6 O2 FORMUL 4 HOH *39(H2 O) HELIX 1 1 ASN A 2 ASN A 22 1 21 HELIX 2 2 GLU A 62 GLY A 75 1 14 HELIX 3 3 ASP A 82 LYS A 107 1 26 HELIX 4 4 ASN B 2 ASN B 22 1 21 HELIX 5 5 GLU B 62 GLY B 75 1 14 HELIX 6 6 ASP B 82 LYS B 107 1 26 SHEET 1 A12 LYS A 26 PRO A 27 0 SHEET 2 A12 GLN A 133 SER A 140 -1 O SER A 140 N LYS A 26 SHEET 3 A12 ALA A 146 GLU A 153 -1 O ALA A 146 N PHE A 139 SHEET 4 A12 THR A 53 PHE A 61 -1 N THR A 60 O TYR A 147 SHEET 5 A12 GLY A 40 GLY A 50 -1 N MSE A 48 O GLY A 55 SHEET 6 A12 ILE A 117 HIS A 128 -1 O ILE A 117 N LEU A 45 SHEET 7 A12 ILE B 117 HIS B 128 -1 O VAL B 118 N ALA A 127 SHEET 8 A12 GLY B 40 GLY B 50 -1 N LEU B 45 O ILE B 117 SHEET 9 A12 THR B 53 PHE B 61 -1 O GLY B 55 N MSE B 48 SHEET 10 A12 GLY B 144 GLU B 153 -1 O GLU B 153 N LYS B 54 SHEET 11 A12 GLN B 133 SER B 141 -1 N PHE B 139 O ALA B 146 SHEET 12 A12 LYS B 26 PRO B 27 -1 N LYS B 26 O SER B 140 SHEET 1 B 6 ASP A 112 MSE A 113 0 SHEET 2 B 6 GLY A 40 GLY A 50 -1 N VAL A 49 O ASP A 112 SHEET 3 B 6 ILE A 117 HIS A 128 -1 O ILE A 117 N LEU A 45 SHEET 4 B 6 ILE B 117 HIS B 128 -1 O VAL B 118 N ALA A 127 SHEET 5 B 6 GLY B 40 GLY B 50 -1 N LEU B 45 O ILE B 117 SHEET 6 B 6 ASP B 112 MSE B 113 -1 O ASP B 112 N VAL B 49 LINK C MSE A 1 N ASN A 2 1555 1555 1.34 LINK C THR A 19 N MSE A 20 1555 1555 1.33 LINK C MSE A 20 N ALA A 21 1555 1555 1.33 LINK C ASN A 22 N MSE A 23 1555 1555 1.32 LINK C MSE A 23 N GLU A 24 1555 1555 1.33 LINK C GLY A 47 N MSE A 48 1555 1555 1.33 LINK C MSE A 48 N VAL A 49 1555 1555 1.34 LINK C ILE A 69 N MSE A 70 1555 1555 1.34 LINK C MSE A 70 N ASN A 71 1555 1555 1.33 LINK C LYS A 72 N MSE A 73 1555 1555 1.33 LINK C MSE A 73 N LEU A 74 1555 1555 1.34 LINK C ASN A 94 N MSE A 95 1555 1555 1.34 LINK C MSE A 95 N VAL A 96 1555 1555 1.34 LINK C ASP A 112 N MSE A 113 1555 1555 1.33 LINK C MSE A 113 N ALA A 114 1555 1555 1.34 LINK C ILE A 136 N MSE A 137 1555 1555 1.34 LINK C MSE A 137 N PRO A 138 1555 1555 1.35 LINK C MSE B 1 N ASN B 2 1555 1555 1.34 LINK C THR B 19 N MSE B 20 1555 1555 1.33 LINK C MSE B 20 N ALA B 21 1555 1555 1.34 LINK C ASN B 22 N MSE B 23 1555 1555 1.33 LINK C MSE B 23 N GLU B 24 1555 1555 1.33 LINK C GLY B 47 N MSE B 48 1555 1555 1.33 LINK C MSE B 48 N VAL B 49 1555 1555 1.34 LINK C ILE B 69 N MSE B 70 1555 1555 1.35 LINK C MSE B 70 N ASN B 71 1555 1555 1.33 LINK C LYS B 72 N MSE B 73 1555 1555 1.33 LINK C MSE B 73 N LEU B 74 1555 1555 1.35 LINK C ASN B 94 N MSE B 95 1555 1555 1.34 LINK C MSE B 95 N VAL B 96 1555 1555 1.34 LINK C ASP B 112 N MSE B 113 1555 1555 1.32 LINK C MSE B 113 N ALA B 114 1555 1555 1.33 LINK C ILE B 136 N MSE B 137 1555 1555 1.33 LINK C MSE B 137 N PRO B 138 1555 1555 1.36 SITE 1 AC1 5 THR A 19 MSE A 20 ASN A 31 HOH A 158 SITE 2 AC1 5 HOH A 167 CRYST1 43.646 52.075 134.429 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022912 0.000000 0.000000 0.00000 SCALE2 0.000000 0.019203 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007439 0.00000 HETATM 1 N MSE A 1 58.843 35.354 45.067 1.00 58.97 N HETATM 2 CA MSE A 1 59.612 34.164 45.543 1.00 58.80 C HETATM 3 C MSE A 1 60.459 33.585 44.391 1.00 57.82 C HETATM 4 O MSE A 1 60.683 34.274 43.383 1.00 57.94 O HETATM 5 CB MSE A 1 58.642 33.128 46.165 1.00 59.22 C HETATM 6 CG MSE A 1 57.632 32.493 45.208 1.00 60.69 C HETATM 7 SE MSE A 1 56.212 31.451 46.101 0.75 64.70 SE HETATM 8 CE MSE A 1 57.418 30.290 47.120 1.00 64.03 C