HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 04-AUG-09 3IJM TITLE THE STRUCTURE OF A RESTRICTION ENDONUCLEASE-LIKE FOLD SUPERFAMILY TITLE 2 PROTEIN FROM SPIROSOMA LINGUALE. COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED RESTRICTION ENDONUCLEASE-LIKE FOLD COMPND 3 SUPERFAMILY PROTEIN; COMPND 4 CHAIN: A, B; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SPIROSOMA LINGUALE; SOURCE 3 ORGANISM_TAXID: 504472; SOURCE 4 STRAIN: DSM 74; SOURCE 5 GENE: DUF820, SLINDRAFT_22400; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG19 KEYWDS DUF820, CYANOBACTERIA, PD(D/E)XK SUPERFAMILY, STRUCTURAL GENOMICS, KEYWDS 2 PSI-2, PROTEIN STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUCTURAL KEYWDS 3 GENOMICS, MCSG, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR M.E.CUFF,C.TESAR,S.SAMANO,J.BEARDEN,A.JOACHIMIAK,MIDWEST CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS (MCSG) REVDAT 3 01-NOV-17 3IJM 1 REMARK REVDAT 2 13-JUL-11 3IJM 1 VERSN REVDAT 1 22-SEP-09 3IJM 0 JRNL AUTH M.E.CUFF,C.TESAR,S.SAMANO,J.BEARDEN,A.JOACHIMIAK JRNL TITL THE STRUCTURE OF A RESTRICTION ENDONUCLEASE-LIKE FOLD JRNL TITL 2 SUPERFAMILY PROTEIN FROM SPIROSOMA LINGUALE. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.42 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 33552 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.199 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1701 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2282 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.55 REMARK 3 BIN R VALUE (WORKING SET) : 0.2520 REMARK 3 BIN FREE R VALUE SET COUNT : 130 REMARK 3 BIN FREE R VALUE : 0.2740 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2298 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 18 REMARK 3 SOLVENT ATOMS : 303 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 24.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.03 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.23000 REMARK 3 B22 (A**2) : -2.24000 REMARK 3 B33 (A**2) : 3.47000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.102 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.100 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.063 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.245 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.969 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.955 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2422 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1585 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3309 ; 1.382 ; 1.975 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3920 ; 0.898 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 303 ; 5.762 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 109 ;33.469 ;25.505 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 407 ;11.925 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;22.964 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 379 ; 0.087 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2683 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 449 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1483 ; 0.862 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 592 ; 0.261 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2431 ; 1.454 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 939 ; 2.088 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 874 ; 3.404 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -2 A 148 REMARK 3 ORIGIN FOR THE GROUP (A): 7.2874 56.0745 15.2241 REMARK 3 T TENSOR REMARK 3 T11: 0.0395 T22: 0.0377 REMARK 3 T33: 0.0285 T12: -0.0127 REMARK 3 T13: -0.0079 T23: -0.0053 REMARK 3 L TENSOR REMARK 3 L11: 1.6741 L22: 1.2441 REMARK 3 L33: 0.6414 L12: -0.0500 REMARK 3 L13: -0.4157 L23: 0.3053 REMARK 3 S TENSOR REMARK 3 S11: 0.0202 S12: 0.0407 S13: -0.0205 REMARK 3 S21: 0.0272 S22: -0.0603 S23: 0.1755 REMARK 3 S31: 0.0495 S32: -0.0484 S33: 0.0401 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B -2 B 148 REMARK 3 ORIGIN FOR THE GROUP (A): 28.9343 62.7055 11.7968 REMARK 3 T TENSOR REMARK 3 T11: 0.0698 T22: 0.0511 REMARK 3 T33: 0.0041 T12: -0.0039 REMARK 3 T13: 0.0028 T23: -0.0003 REMARK 3 L TENSOR REMARK 3 L11: 1.8134 L22: 1.8034 REMARK 3 L33: 0.3156 L12: -0.0686 REMARK 3 L13: -0.0957 L23: -0.0459 REMARK 3 S TENSOR REMARK 3 S11: 0.0150 S12: 0.0338 S13: 0.0377 REMARK 3 S21: -0.0163 S22: -0.0238 S23: -0.0749 REMARK 3 S31: 0.0097 S32: -0.0122 S33: 0.0088 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : RESIDUAL ONLY REMARK 4 REMARK 4 3IJM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-AUG-09. REMARK 100 THE DEPOSITION ID IS D_1000054493. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-JUL-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97950, 0.97992 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33607 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : 0.47700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: MLPHARE, DM 6.0, HKL-3000, SHELXD, SOLVE, RESOLVE, REMARK 200 CCP4 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M NACL, 0.1M BIS TRIS PH6.5, 1.5M REMARK 280 (NH4)2SO4, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 279K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 32.88500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 34.45850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.92450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 34.45850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.88500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 32.92450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AUTHORS STATE THAT THE BIOLOGICAL UNIT IS UNKNOWN, BUT REMARK 300 LIKELY A DIMER, AS SEEN IN THE AU (A+B). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13720 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MSE A 1 REMARK 465 ASN A 2 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 MSE B 1 REMARK 465 ASN B 2 REMARK 465 TYR B 3 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 98 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 16 48.22 -100.34 REMARK 500 GLU A 53 55.82 39.82 REMARK 500 ALA A 104 59.90 -118.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 151 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 26 NE2 REMARK 620 2 ASP A 66 OD2 82.1 REMARK 620 3 VAL A 83 O 84.1 87.1 REMARK 620 4 HOH A 154 O 95.5 174.4 87.6 REMARK 620 5 HOH A 299 O 168.4 86.8 92.1 95.2 REMARK 620 6 HOH A 303 O 94.5 91.2 178.0 94.0 89.0 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 149 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 150 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 151 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 149 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC37362 RELATED DB: TARGETDB DBREF 3IJM A 1 148 UNP C4CXR0 C4CXR0_9SPHI 1 148 DBREF 3IJM B 1 148 UNP C4CXR0 C4CXR0_9SPHI 1 148 SEQADV 3IJM SER A -2 UNP C4CXR0 EXPRESSION TAG SEQADV 3IJM ASN A -1 UNP C4CXR0 EXPRESSION TAG SEQADV 3IJM ALA A 0 UNP C4CXR0 EXPRESSION TAG SEQADV 3IJM SER B -2 UNP C4CXR0 EXPRESSION TAG SEQADV 3IJM ASN B -1 UNP C4CXR0 EXPRESSION TAG SEQADV 3IJM ALA B 0 UNP C4CXR0 EXPRESSION TAG SEQRES 1 A 151 SER ASN ALA MSE ASN TYR SER HIS PRO ILE SER LEU LYS SEQRES 2 A 151 THR LEU VAL GLN GLU ASP ASP ILE GLY VAL ASN ALA PRO SEQRES 3 A 151 ILE ILE HIS GLN SER VAL ILE ALA ARG LEU THR ALA GLY SEQRES 4 A 151 LEU TYR PRO LEU TYR GLN SER LYS LYS ILE PRO PHE GLU SEQRES 5 A 151 PRO LEU PRO GLU THR MSE LEU THR GLU GLY TYR SER SER SEQRES 6 A 151 PRO VAL PRO ASP VAL LEU LEU TYR ASP HIS GLN THR GLU SEQRES 7 A 151 GLU ALA LYS VAL ILE ILE GLU VAL CYS GLN ASN SER GLY SEQRES 8 A 151 LEU LYS HIS ASP THR SER LYS ILE VAL LYS LEU ILE GLU SEQRES 9 A 151 ASP ASN ALA TYR GLY ILE LEU GLU GLY PHE VAL PHE ASN SEQRES 10 A 151 TYR LYS THR GLN GLN TRP LEU ARG TYR ARG LEU GLY ASP SEQRES 11 A 151 GLY GLY VAL ALA THR ASN SER SER PHE SER GLU VAL LEU SEQRES 12 A 151 GLN VAL ASP LEU ASN THR PHE VAL SEQRES 1 B 151 SER ASN ALA MSE ASN TYR SER HIS PRO ILE SER LEU LYS SEQRES 2 B 151 THR LEU VAL GLN GLU ASP ASP ILE GLY VAL ASN ALA PRO SEQRES 3 B 151 ILE ILE HIS GLN SER VAL ILE ALA ARG LEU THR ALA GLY SEQRES 4 B 151 LEU TYR PRO LEU TYR GLN SER LYS LYS ILE PRO PHE GLU SEQRES 5 B 151 PRO LEU PRO GLU THR MSE LEU THR GLU GLY TYR SER SER SEQRES 6 B 151 PRO VAL PRO ASP VAL LEU LEU TYR ASP HIS GLN THR GLU SEQRES 7 B 151 GLU ALA LYS VAL ILE ILE GLU VAL CYS GLN ASN SER GLY SEQRES 8 B 151 LEU LYS HIS ASP THR SER LYS ILE VAL LYS LEU ILE GLU SEQRES 9 B 151 ASP ASN ALA TYR GLY ILE LEU GLU GLY PHE VAL PHE ASN SEQRES 10 B 151 TYR LYS THR GLN GLN TRP LEU ARG TYR ARG LEU GLY ASP SEQRES 11 B 151 GLY GLY VAL ALA THR ASN SER SER PHE SER GLU VAL LEU SEQRES 12 B 151 GLN VAL ASP LEU ASN THR PHE VAL MODRES 3IJM MSE A 55 MET SELENOMETHIONINE MODRES 3IJM MSE B 55 MET SELENOMETHIONINE HET MSE A 55 8 HET MSE B 55 8 HET GOL A 149 6 HET SO4 A 150 5 HET NA A 151 1 HET GOL B 149 6 HETNAM MSE SELENOMETHIONINE HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETNAM NA SODIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 2(C5 H11 N O2 SE) FORMUL 3 GOL 2(C3 H8 O3) FORMUL 4 SO4 O4 S 2- FORMUL 5 NA NA 1+ FORMUL 7 HOH *303(H2 O) HELIX 1 1 SER A 8 ASP A 16 1 9 HELIX 2 2 ASN A 21 SER A 43 1 23 HELIX 3 3 GLN A 85 SER A 87 5 3 HELIX 4 4 GLY A 88 ASP A 102 1 15 HELIX 5 5 ASN A 145 VAL A 148 5 4 HELIX 6 6 SER B 8 ASP B 16 1 9 HELIX 7 7 ASN B 21 SER B 43 1 23 HELIX 8 8 GLY B 88 ASP B 102 1 15 HELIX 9 9 ASN B 145 VAL B 148 5 4 SHEET 1 A 5 GLU A 49 PRO A 52 0 SHEET 2 A 5 VAL A 67 ASP A 71 -1 O LEU A 68 N LEU A 51 SHEET 3 A 5 GLU A 76 CYS A 84 -1 O GLU A 76 N ASP A 71 SHEET 4 A 5 GLU A 109 ASN A 114 1 O PHE A 113 N GLU A 82 SHEET 5 A 5 GLN A 119 ARG A 124 -1 O TYR A 123 N GLY A 110 SHEET 1 B 2 PHE A 136 SER A 137 0 SHEET 2 B 2 VAL A 142 ASP A 143 -1 O VAL A 142 N SER A 137 SHEET 1 C 5 GLU B 49 PRO B 52 0 SHEET 2 C 5 VAL B 67 ASP B 71 -1 O TYR B 70 N GLU B 49 SHEET 3 C 5 GLU B 76 VAL B 83 -1 O LYS B 78 N LEU B 69 SHEET 4 C 5 GLU B 109 ASN B 114 1 O PHE B 113 N GLU B 82 SHEET 5 C 5 GLN B 119 ARG B 124 -1 O TYR B 123 N GLY B 110 SHEET 1 D 2 PHE B 136 SER B 137 0 SHEET 2 D 2 VAL B 142 ASP B 143 -1 O VAL B 142 N SER B 137 LINK C THR A 54 N MSE A 55 1555 1555 1.33 LINK C MSE A 55 N LEU A 56 1555 1555 1.33 LINK C THR B 54 N MSE B 55 1555 1555 1.33 LINK C MSE B 55 N LEU B 56 1555 1555 1.34 LINK NE2 HIS A 26 NA NA A 151 1555 1555 2.37 LINK OD2 ASP A 66 NA NA A 151 1555 1555 2.27 LINK O VAL A 83 NA NA A 151 1555 1555 2.26 LINK NA NA A 151 O HOH A 154 1555 1555 2.32 LINK NA NA A 151 O HOH A 299 1555 1555 2.03 LINK NA NA A 151 O HOH A 303 1555 1555 2.19 SITE 1 AC1 5 GLU A 101 ASN A 103 HOH A 266 HOH A 268 SITE 2 AC1 5 HOH B 257 SITE 1 AC2 3 ARG A 124 GLY B 128 HOH B 171 SITE 1 AC3 6 HIS A 26 ASP A 66 VAL A 83 HOH A 154 SITE 2 AC3 6 HOH A 299 HOH A 303 SITE 1 AC4 4 HOH A 291 ILE B 7 GLU B 15 HOH B 290 CRYST1 65.770 65.849 68.917 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015205 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015186 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014510 0.00000