data_3IM4 # _entry.id 3IM4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.399 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3IM4 pdb_00003im4 10.2210/pdb3im4/pdb RCSB RCSB054582 ? ? WWPDB D_1000054582 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-02-02 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2022-12-21 4 'Structure model' 1 3 2024-11-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Derived calculations' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_struct_conn_angle 3 3 'Structure model' struct_conn 4 3 'Structure model' struct_ref_seq_dif 5 3 'Structure model' struct_site 6 4 'Structure model' chem_comp_atom 7 4 'Structure model' chem_comp_bond 8 4 'Structure model' pdbx_entry_details 9 4 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.value' 16 3 'Structure model' '_struct_conn.pdbx_dist_value' 17 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 18 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 19 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 20 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 21 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 22 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 23 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 24 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 25 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 26 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 27 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 28 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 29 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 30 3 'Structure model' '_struct_ref_seq_dif.details' 31 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 32 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 33 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3IM4 _pdbx_database_status.recvd_initial_deposition_date 2009-08-09 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3IM3 _pdbx_database_related.details 'Crystal structure of PKA RI alpha dimerization/docking domain (same protein without D-AKAP2 peptide)' _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Sarma, G.N.' 1 'Kinderman, F.S.' 2 'Kim, C.' 3 'von Daake, S.' 4 'Taylor, S.S.' 5 # _citation.id primary _citation.title 'Structure of D-AKAP2:PKA RI Complex: Insights into AKAP Specificity and Selectivity' _citation.journal_abbrev Structure _citation.journal_volume 18 _citation.page_first 155 _citation.page_last 166 _citation.year 2010 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20159461 _citation.pdbx_database_id_DOI 10.1016/j.str.2009.12.012 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sarma, G.N.' 1 ? primary 'Kinderman, F.S.' 2 ? primary 'Kim, C.' 3 ? primary 'von Daake, S.' 4 ? primary 'Chen, L.' 5 ? primary 'Wang, B.C.' 6 ? primary 'Taylor, S.S.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'cAMP-dependent protein kinase type I-alpha regulatory subunit' 6005.980 2 ? ? 'Dimerization and docking domain: UNP residues 13-62' ? 2 polymer man 'Dual specificity A kinase-anchoring protein 2' 5086.658 1 ? ? 'PKA-RII subunit binding: UNP residues 623-662' ? 3 non-polymer syn 'ZINC ION' 65.409 5 ? ? ? ? 4 water nat water 18.015 30 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name 'Kinase anchor protein 10, Protein kinase A-anchoring protein 10, PRKA10, D-AKAP-2' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no SLRECELYVQKHNIQALLKDSIVQLCTARPERPMAFLREYFEKLEKEEAK SLRECELYVQKHNIQALLKDSIVQLCTARPERPMAFLREYFEKLEKEEAK A,B ? 2 'polypeptide(L)' no no GSPEFVQGNTDEAQEELAWKIAKMIVSDVMQQAQYDQPLEKSTKL GSPEFVQGNTDEAQEELAWKIAKMIVSDVMQQAQYDQPLEKSTKL C ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'ZINC ION' ZN 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 LEU n 1 3 ARG n 1 4 GLU n 1 5 CYS n 1 6 GLU n 1 7 LEU n 1 8 TYR n 1 9 VAL n 1 10 GLN n 1 11 LYS n 1 12 HIS n 1 13 ASN n 1 14 ILE n 1 15 GLN n 1 16 ALA n 1 17 LEU n 1 18 LEU n 1 19 LYS n 1 20 ASP n 1 21 SER n 1 22 ILE n 1 23 VAL n 1 24 GLN n 1 25 LEU n 1 26 CYS n 1 27 THR n 1 28 ALA n 1 29 ARG n 1 30 PRO n 1 31 GLU n 1 32 ARG n 1 33 PRO n 1 34 MET n 1 35 ALA n 1 36 PHE n 1 37 LEU n 1 38 ARG n 1 39 GLU n 1 40 TYR n 1 41 PHE n 1 42 GLU n 1 43 LYS n 1 44 LEU n 1 45 GLU n 1 46 LYS n 1 47 GLU n 1 48 GLU n 1 49 ALA n 1 50 LYS n 2 1 GLY n 2 2 SER n 2 3 PRO n 2 4 GLU n 2 5 PHE n 2 6 VAL n 2 7 GLN n 2 8 GLY n 2 9 ASN n 2 10 THR n 2 11 ASP n 2 12 GLU n 2 13 ALA n 2 14 GLN n 2 15 GLU n 2 16 GLU n 2 17 LEU n 2 18 ALA n 2 19 TRP n 2 20 LYS n 2 21 ILE n 2 22 ALA n 2 23 LYS n 2 24 MET n 2 25 ILE n 2 26 VAL n 2 27 SER n 2 28 ASP n 2 29 VAL n 2 30 MET n 2 31 GLN n 2 32 GLN n 2 33 ALA n 2 34 GLN n 2 35 TYR n 2 36 ASP n 2 37 GLN n 2 38 PRO n 2 39 LEU n 2 40 GLU n 2 41 LYS n 2 42 SER n 2 43 THR n 2 44 LYS n 2 45 LEU n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? bovine ? PRKAR1A ? ? ? ? ? ? 'Bos taurus' 9913 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? 'BL21(DE3)' ? ? ? ? ? ? ? plasmid ? ? ? 'pRSET C' ? ? 2 1 sample ? ? ? human ? AKAP10 ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? 'BL21(DE3)' ? ? ? ? ? ? ? plasmid ? ? ? 'pGEX 4T-1' ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 12 12 SER SER A . n A 1 2 LEU 2 13 13 LEU LEU A . n A 1 3 ARG 3 14 14 ARG ARG A . n A 1 4 GLU 4 15 15 GLU GLU A . n A 1 5 CYS 5 16 16 CYS CYS A . n A 1 6 GLU 6 17 17 GLU GLU A . n A 1 7 LEU 7 18 18 LEU LEU A . n A 1 8 TYR 8 19 19 TYR TYR A . n A 1 9 VAL 9 20 20 VAL VAL A . n A 1 10 GLN 10 21 21 GLN GLN A . n A 1 11 LYS 11 22 22 LYS ALA A . n A 1 12 HIS 12 23 23 HIS HIS A . n A 1 13 ASN 13 24 24 ASN ASN A . n A 1 14 ILE 14 25 25 ILE ILE A . n A 1 15 GLN 15 26 26 GLN GLN A . n A 1 16 ALA 16 27 27 ALA ALA A . n A 1 17 LEU 17 28 28 LEU LEU A . n A 1 18 LEU 18 29 29 LEU LEU A . n A 1 19 LYS 19 30 30 LYS LYS A . n A 1 20 ASP 20 31 31 ASP ASP A . n A 1 21 SER 21 32 32 SER SER A . n A 1 22 ILE 22 33 33 ILE ILE A . n A 1 23 VAL 23 34 34 VAL VAL A . n A 1 24 GLN 24 35 35 GLN GLN A . n A 1 25 LEU 25 36 36 LEU LEU A . n A 1 26 CYS 26 37 37 CYS CYS A . n A 1 27 THR 27 38 38 THR THR A . n A 1 28 ALA 28 39 39 ALA ALA A . n A 1 29 ARG 29 40 40 ARG ARG A . n A 1 30 PRO 30 41 41 PRO PRO A . n A 1 31 GLU 31 42 42 GLU GLU A . n A 1 32 ARG 32 43 43 ARG ARG A . n A 1 33 PRO 33 44 44 PRO PRO A . n A 1 34 MET 34 45 45 MET MET A . n A 1 35 ALA 35 46 46 ALA ALA A . n A 1 36 PHE 36 47 47 PHE PHE A . n A 1 37 LEU 37 48 48 LEU LEU A . n A 1 38 ARG 38 49 49 ARG ARG A . n A 1 39 GLU 39 50 50 GLU GLU A . n A 1 40 TYR 40 51 51 TYR TYR A . n A 1 41 PHE 41 52 52 PHE PHE A . n A 1 42 GLU 42 53 53 GLU GLU A . n A 1 43 LYS 43 54 54 LYS LYS A . n A 1 44 LEU 44 55 55 LEU LEU A . n A 1 45 GLU 45 56 56 GLU GLU A . n A 1 46 LYS 46 57 57 LYS LYS A . n A 1 47 GLU 47 58 58 GLU GLU A . n A 1 48 GLU 48 59 59 GLU GLU A . n A 1 49 ALA 49 60 60 ALA ALA A . n A 1 50 LYS 50 61 61 LYS ALA A . n B 1 1 SER 1 12 12 SER SER B . n B 1 2 LEU 2 13 13 LEU LEU B . n B 1 3 ARG 3 14 14 ARG ARG B . n B 1 4 GLU 4 15 15 GLU GLU B . n B 1 5 CYS 5 16 16 CYS CYS B . n B 1 6 GLU 6 17 17 GLU GLU B . n B 1 7 LEU 7 18 18 LEU LEU B . n B 1 8 TYR 8 19 19 TYR TYR B . n B 1 9 VAL 9 20 20 VAL VAL B . n B 1 10 GLN 10 21 21 GLN GLN B . n B 1 11 LYS 11 22 22 LYS LYS B . n B 1 12 HIS 12 23 23 HIS HIS B . n B 1 13 ASN 13 24 24 ASN ASN B . n B 1 14 ILE 14 25 25 ILE ILE B . n B 1 15 GLN 15 26 26 GLN GLN B . n B 1 16 ALA 16 27 27 ALA ALA B . n B 1 17 LEU 17 28 28 LEU LEU B . n B 1 18 LEU 18 29 29 LEU LEU B . n B 1 19 LYS 19 30 30 LYS LYS B . n B 1 20 ASP 20 31 31 ASP ASP B . n B 1 21 SER 21 32 32 SER SER B . n B 1 22 ILE 22 33 33 ILE ILE B . n B 1 23 VAL 23 34 34 VAL VAL B . n B 1 24 GLN 24 35 35 GLN GLN B . n B 1 25 LEU 25 36 36 LEU LEU B . n B 1 26 CYS 26 37 37 CYS CYS B . n B 1 27 THR 27 38 38 THR THR B . n B 1 28 ALA 28 39 39 ALA ALA B . n B 1 29 ARG 29 40 40 ARG ARG B . n B 1 30 PRO 30 41 41 PRO PRO B . n B 1 31 GLU 31 42 42 GLU GLU B . n B 1 32 ARG 32 43 43 ARG ARG B . n B 1 33 PRO 33 44 44 PRO PRO B . n B 1 34 MET 34 45 45 MET MET B . n B 1 35 ALA 35 46 46 ALA ALA B . n B 1 36 PHE 36 47 47 PHE PHE B . n B 1 37 LEU 37 48 48 LEU LEU B . n B 1 38 ARG 38 49 49 ARG ARG B . n B 1 39 GLU 39 50 50 GLU GLU B . n B 1 40 TYR 40 51 51 TYR TYR B . n B 1 41 PHE 41 52 52 PHE PHE B . n B 1 42 GLU 42 53 53 GLU GLU B . n B 1 43 LYS 43 54 54 LYS LYS B . n B 1 44 LEU 44 55 55 LEU LEU B . n B 1 45 GLU 45 56 56 GLU GLU B . n B 1 46 LYS 46 57 57 LYS LYS B . n B 1 47 GLU 47 58 58 GLU GLU B . n B 1 48 GLU 48 59 59 GLU GLU B . n B 1 49 ALA 49 60 60 ALA ALA B . n B 1 50 LYS 50 61 ? ? ? B . n C 2 1 GLY 1 618 ? ? ? C . n C 2 2 SER 2 619 ? ? ? C . n C 2 3 PRO 3 620 ? ? ? C . n C 2 4 GLU 4 621 ? ? ? C . n C 2 5 PHE 5 622 ? ? ? C . n C 2 6 VAL 6 623 ? ? ? C . n C 2 7 GLN 7 624 ? ? ? C . n C 2 8 GLY 8 625 ? ? ? C . n C 2 9 ASN 9 626 ? ? ? C . n C 2 10 THR 10 627 ? ? ? C . n C 2 11 ASP 11 628 628 ASP ALA C . n C 2 12 GLU 12 629 629 GLU GLU C . n C 2 13 ALA 13 630 630 ALA ALA C . n C 2 14 GLN 14 631 631 GLN ALA C . n C 2 15 GLU 15 632 632 GLU GLU C . n C 2 16 GLU 16 633 633 GLU GLU C . n C 2 17 LEU 17 634 634 LEU LEU C . n C 2 18 ALA 18 635 635 ALA ALA C . n C 2 19 TRP 19 636 636 TRP TRP C . n C 2 20 LYS 20 637 637 LYS LYS C . n C 2 21 ILE 21 638 638 ILE ILE C . n C 2 22 ALA 22 639 639 ALA ALA C . n C 2 23 LYS 23 640 640 LYS LYS C . n C 2 24 MET 24 641 641 MET MET C . n C 2 25 ILE 25 642 642 ILE ILE C . n C 2 26 VAL 26 643 643 VAL VAL C . n C 2 27 SER 27 644 644 SER SER C . n C 2 28 ASP 28 645 645 ASP ASP C . n C 2 29 VAL 29 646 646 VAL VAL C . n C 2 30 MET 30 647 647 MET MET C . n C 2 31 GLN 31 648 648 GLN ALA C . n C 2 32 GLN 32 649 649 GLN GLN C . n C 2 33 ALA 33 650 650 ALA ALA C . n C 2 34 GLN 34 651 651 GLN ALA C . n C 2 35 TYR 35 652 652 TYR ALA C . n C 2 36 ASP 36 653 653 ASP ASP C . n C 2 37 GLN 37 654 654 GLN ALA C . n C 2 38 PRO 38 655 ? ? ? C . n C 2 39 LEU 39 656 ? ? ? C . n C 2 40 GLU 40 657 ? ? ? C . n C 2 41 LYS 41 658 ? ? ? C . n C 2 42 SER 42 659 ? ? ? C . n C 2 43 THR 43 660 ? ? ? C . n C 2 44 LYS 44 661 ? ? ? C . n C 2 45 LEU 45 662 ? ? ? C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 ZN 1 701 1 ZN ZN A . E 3 ZN 1 702 2 ZN ZN A . F 3 ZN 1 705 5 ZN ZN A . G 3 ZN 1 703 3 ZN ZN B . H 3 ZN 1 704 4 ZN ZN B . I 4 HOH 1 102 2 HOH HOH A . I 4 HOH 2 103 3 HOH HOH A . I 4 HOH 3 104 4 HOH HOH A . I 4 HOH 4 108 8 HOH HOH A . I 4 HOH 5 109 9 HOH HOH A . I 4 HOH 6 117 17 HOH HOH A . I 4 HOH 7 119 19 HOH HOH A . I 4 HOH 8 121 21 HOH HOH A . I 4 HOH 9 122 22 HOH HOH A . I 4 HOH 10 125 25 HOH HOH A . I 4 HOH 11 127 27 HOH HOH A . I 4 HOH 12 130 30 HOH HOH A . J 4 HOH 1 101 1 HOH HOH B . J 4 HOH 2 105 5 HOH HOH B . J 4 HOH 3 106 6 HOH HOH B . J 4 HOH 4 107 7 HOH HOH B . J 4 HOH 5 110 10 HOH HOH B . J 4 HOH 6 113 13 HOH HOH B . J 4 HOH 7 114 14 HOH HOH B . J 4 HOH 8 115 15 HOH HOH B . J 4 HOH 9 116 16 HOH HOH B . J 4 HOH 10 118 18 HOH HOH B . J 4 HOH 11 120 20 HOH HOH B . J 4 HOH 12 123 23 HOH HOH B . J 4 HOH 13 124 24 HOH HOH B . J 4 HOH 14 126 26 HOH HOH B . J 4 HOH 15 128 28 HOH HOH B . K 4 HOH 1 111 11 HOH HOH C . K 4 HOH 2 112 12 HOH HOH C . K 4 HOH 3 129 29 HOH HOH C . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 22 ? CG ? A LYS 11 CG 2 1 Y 1 A LYS 22 ? CD ? A LYS 11 CD 3 1 Y 1 A LYS 22 ? CE ? A LYS 11 CE 4 1 Y 1 A LYS 22 ? NZ ? A LYS 11 NZ 5 1 Y 1 A LYS 61 ? CG ? A LYS 50 CG 6 1 Y 1 A LYS 61 ? CD ? A LYS 50 CD 7 1 Y 1 A LYS 61 ? CE ? A LYS 50 CE 8 1 Y 1 A LYS 61 ? NZ ? A LYS 50 NZ 9 1 Y 1 C ASP 628 ? CG ? C ASP 11 CG 10 1 Y 1 C ASP 628 ? OD1 ? C ASP 11 OD1 11 1 Y 1 C ASP 628 ? OD2 ? C ASP 11 OD2 12 1 Y 1 C GLN 631 ? CG ? C GLN 14 CG 13 1 Y 1 C GLN 631 ? CD ? C GLN 14 CD 14 1 Y 1 C GLN 631 ? OE1 ? C GLN 14 OE1 15 1 Y 1 C GLN 631 ? NE2 ? C GLN 14 NE2 16 1 Y 1 C GLN 648 ? CG ? C GLN 31 CG 17 1 Y 1 C GLN 648 ? CD ? C GLN 31 CD 18 1 Y 1 C GLN 648 ? OE1 ? C GLN 31 OE1 19 1 Y 1 C GLN 648 ? NE2 ? C GLN 31 NE2 20 1 Y 1 C GLN 651 ? CG ? C GLN 34 CG 21 1 Y 1 C GLN 651 ? CD ? C GLN 34 CD 22 1 Y 1 C GLN 651 ? OE1 ? C GLN 34 OE1 23 1 Y 1 C GLN 651 ? NE2 ? C GLN 34 NE2 24 1 Y 1 C TYR 652 ? CG ? C TYR 35 CG 25 1 Y 1 C TYR 652 ? CD1 ? C TYR 35 CD1 26 1 Y 1 C TYR 652 ? CD2 ? C TYR 35 CD2 27 1 Y 1 C TYR 652 ? CE1 ? C TYR 35 CE1 28 1 Y 1 C TYR 652 ? CE2 ? C TYR 35 CE2 29 1 Y 1 C TYR 652 ? CZ ? C TYR 35 CZ 30 1 Y 1 C TYR 652 ? OH ? C TYR 35 OH 31 1 Y 1 C GLN 654 ? CG ? C GLN 37 CG 32 1 Y 1 C GLN 654 ? CD ? C GLN 37 CD 33 1 Y 1 C GLN 654 ? OE1 ? C GLN 37 OE1 34 1 Y 1 C GLN 654 ? NE2 ? C GLN 37 NE2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 PHASER phasing . ? 2 PHENIX refinement . ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _cell.entry_id 3IM4 _cell.length_a 40.400 _cell.length_b 56.020 _cell.length_c 56.990 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3IM4 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3IM4 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.89 _exptl_crystal.density_percent_sol 34.78 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method MICROBATCH _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.pdbx_details '10% PEG 6000, 0.01 M ZnCl2, 0.1 M MES, pH 5.5, MICROBATCH, temperature 298K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2008-12-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double crystal Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.2.2' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.2.2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0000 # _reflns.entry_id 3IM4 _reflns.observed_criterion_sigma_I 1.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 2.285 _reflns.number_obs 6221 _reflns.number_all ? _reflns.percent_possible_obs 100 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.285 _reflns_shell.d_res_low 2.380 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3IM4 _refine.ls_number_reflns_obs 6015 _refine.ls_number_reflns_all 6221 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.16 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 39.9567 _refine.ls_d_res_high 2.285 _refine.ls_percent_reflns_obs 96.61 _refine.ls_R_factor_all 0.1927 _refine.ls_R_factor_obs 0.1860 _refine.ls_R_factor_R_work 0.1860 _refine.ls_R_factor_R_free 0.2542 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.98 _refine.ls_number_reflns_R_free 600 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.329 _refine.solvent_model_param_bsol 50.871 _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.36 _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1023 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 5 _refine_hist.number_atoms_solvent 30 _refine_hist.number_atoms_total 1058 _refine_hist.d_res_high 2.285 _refine_hist.d_res_low 39.9567 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.005 ? ? 1040 'X-RAY DIFFRACTION' ? f_angle_d 0.810 ? ? 1397 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 17.216 ? ? 401 'X-RAY DIFFRACTION' ? f_chiral_restr 0.050 ? ? 157 'X-RAY DIFFRACTION' ? f_plane_restr 0.005 ? ? 181 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 2.285 2.5152 1240 0.2043 91.00 0.2908 . . 136 . . . . 'X-RAY DIFFRACTION' . 2.5152 2.8791 1344 0.2039 98.00 0.3100 . . 154 . . . . 'X-RAY DIFFRACTION' . 2.8791 3.6269 1365 0.1969 98.00 0.2871 . . 152 . . . . 'X-RAY DIFFRACTION' . 3.6269 39.9567 1466 0.1682 99.00 0.2153 . . 158 . . . . 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3IM4 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3IM4 _struct.title ;Crystal structure of cAMP-dependent Protein Kinase A Regulatory Subunit I alpha in complex with dual-specific A-Kinase Anchoring Protein 2 ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3IM4 _struct_keywords.pdbx_keywords 'STRUCTURAL PROTEIN, SIGNALING PROTEIN' _struct_keywords.text ;four-helix bundle, Acetylation, cAMP, cAMP-binding, Disulfide bond, Nucleotide-binding, Phosphoprotein, Cytoplasm, Membrane, Mitochondrion, Polymorphism, Transit peptide, STRUCTURAL PROTEIN, SIGNALING PROTEIN ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 4 ? J N N 4 ? K N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP KAP0_BOVIN P00514 1 SLRECELYVQKHNIQALLKDSIVQLCTARPERPMAFLREYFEKLEKEEAK 13 ? 2 UNP AKA10_HUMAN O43572 2 VQGNTDEAQEELAWKIAKMIVSDIMQQAQYDQPLEKSTKL 623 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3IM4 A 1 ? 50 ? P00514 13 ? 62 ? 12 61 2 1 3IM4 B 1 ? 50 ? P00514 13 ? 62 ? 12 61 3 2 3IM4 C 6 ? 45 ? O43572 623 ? 662 ? 623 662 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 3 3IM4 GLY C 1 ? UNP O43572 ? ? 'expression tag' 618 1 3 3IM4 SER C 2 ? UNP O43572 ? ? 'expression tag' 619 2 3 3IM4 PRO C 3 ? UNP O43572 ? ? 'expression tag' 620 3 3 3IM4 GLU C 4 ? UNP O43572 ? ? 'expression tag' 621 4 3 3IM4 PHE C 5 ? UNP O43572 ? ? 'expression tag' 622 5 3 3IM4 VAL C 29 ? UNP O43572 ILE 646 variant 646 6 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4470 ? 1 MORE -52.9 ? 1 'SSA (A^2)' 7460 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ;BIOLOGICAL UNIT IS THE RI ALPHA DIMER BOUND TO A MONOMER OF D-AKAP2. AUTHOR STATES THAT THE QUARTERNARY STRUCTURE SHOWN IN REMARK 350 IS NOT CORRECT: IT IS *NOT* A TRIMER. IT IS A PROTEIN COMPLEX STRUCTURE OF TWO PROTEINS: A DIMER BOUND TO A MONOMER. ; # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 2 ? GLN A 10 ? LEU A 13 GLN A 21 1 ? 9 HELX_P HELX_P2 2 ILE A 14 ? THR A 27 ? ILE A 25 THR A 38 1 ? 14 HELX_P HELX_P3 3 PRO A 33 ? ALA A 49 ? PRO A 44 ALA A 60 1 ? 17 HELX_P HELX_P4 4 LEU B 2 ? GLN B 10 ? LEU B 13 GLN B 21 1 ? 9 HELX_P HELX_P5 5 ILE B 14 ? THR B 27 ? ILE B 25 THR B 38 1 ? 14 HELX_P HELX_P6 6 PRO B 33 ? ALA B 49 ? PRO B 44 ALA B 60 1 ? 17 HELX_P HELX_P7 7 GLU C 12 ? ASP C 36 ? GLU C 629 ASP C 653 1 ? 25 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 5 SG A ? ? 1_555 B CYS 26 SG ? ? A CYS 16 B CYS 37 1_555 ? ? ? ? ? ? ? 2.042 ? ? disulf2 disulf ? ? A CYS 26 SG ? ? ? 1_555 B CYS 5 SG ? ? A CYS 37 B CYS 16 1_555 ? ? ? ? ? ? ? 2.032 ? ? metalc1 metalc ? ? A GLU 4 OE2 ? ? ? 1_555 E ZN . ZN ? ? A GLU 15 A ZN 702 1_555 ? ? ? ? ? ? ? 2.509 ? ? metalc2 metalc ? ? A HIS 12 NE2 ? ? ? 1_555 D ZN . ZN ? ? A HIS 23 A ZN 701 1_555 ? ? ? ? ? ? ? 2.177 ? ? metalc3 metalc ? ? I HOH . O ? ? ? 1_555 F ZN . ZN ? ? A HOH 103 A ZN 705 1_555 ? ? ? ? ? ? ? 2.228 ? ? metalc4 metalc ? ? B GLU 31 OE2 ? ? ? 1_555 G ZN . ZN ? ? B GLU 42 B ZN 703 1_555 ? ? ? ? ? ? ? 2.109 ? ? metalc5 metalc ? ? B GLU 31 OE1 ? ? ? 1_555 G ZN . ZN ? ? B GLU 42 B ZN 703 1_555 ? ? ? ? ? ? ? 2.499 ? ? metalc6 metalc ? ? J HOH . O ? ? ? 1_555 G ZN . ZN ? ? B HOH 101 B ZN 703 1_555 ? ? ? ? ? ? ? 2.134 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE2 ? B GLU 31 ? B GLU 42 ? 1_555 ZN ? G ZN . ? B ZN 703 ? 1_555 OE1 ? B GLU 31 ? B GLU 42 ? 1_555 56.0 ? 2 OE2 ? B GLU 31 ? B GLU 42 ? 1_555 ZN ? G ZN . ? B ZN 703 ? 1_555 O ? J HOH . ? B HOH 101 ? 1_555 97.6 ? 3 OE1 ? B GLU 31 ? B GLU 42 ? 1_555 ZN ? G ZN . ? B ZN 703 ? 1_555 O ? J HOH . ? B HOH 101 ? 1_555 153.6 ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 5 A CYS B 26 ? CYS A 16 ? 1_555 CYS B 37 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS A 26 ? CYS B 5 ? CYS A 37 ? 1_555 CYS B 16 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 701 ? 3 'BINDING SITE FOR RESIDUE ZN A 701' AC2 Software A ZN 702 ? 5 'BINDING SITE FOR RESIDUE ZN A 702' AC3 Software A ZN 705 ? 4 'BINDING SITE FOR RESIDUE ZN A 705' AC4 Software B ZN 703 ? 4 'BINDING SITE FOR RESIDUE ZN B 703' AC5 Software B ZN 704 ? 3 'BINDING SITE FOR RESIDUE ZN B 704' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 HIS A 12 ? HIS A 23 . ? 1_555 ? 2 AC1 3 GLU A 31 ? GLU A 42 . ? 2_564 ? 3 AC1 3 GLU C 16 ? GLU C 633 . ? 4_555 ? 4 AC2 5 GLU A 4 ? GLU A 15 . ? 1_555 ? 5 AC2 5 ARG A 38 ? ARG A 49 . ? 2_564 ? 6 AC2 5 GLU A 39 ? GLU A 50 . ? 2_564 ? 7 AC2 5 HOH I . ? HOH A 127 . ? 1_555 ? 8 AC2 5 GLU B 45 ? GLU B 56 . ? 2_564 ? 9 AC3 4 HIS A 12 ? HIS A 23 . ? 1_555 ? 10 AC3 4 GLU A 31 ? GLU A 42 . ? 2_564 ? 11 AC3 4 HOH I . ? HOH A 103 . ? 1_555 ? 12 AC3 4 HOH K . ? HOH C 111 . ? 4_555 ? 13 AC4 4 HIS B 12 ? HIS B 23 . ? 2_564 ? 14 AC4 4 GLU B 31 ? GLU B 42 . ? 1_555 ? 15 AC4 4 HOH J . ? HOH B 101 . ? 1_555 ? 16 AC4 4 GLU C 12 ? GLU C 629 . ? 4_555 ? 17 AC5 3 GLU A 45 ? GLU A 56 . ? 2_565 ? 18 AC5 3 GLU B 4 ? GLU B 15 . ? 1_555 ? 19 AC5 3 ARG B 38 ? ARG B 49 . ? 2_565 ? # _pdbx_entry_details.entry_id 3IM4 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -3.3160 20.0101 -1.3816 0.1932 0.2240 0.3695 -0.0124 -0.0059 0.0200 0.5158 0.9226 1.1339 -0.4161 -0.2009 -0.7354 -0.0118 -0.0658 -0.2564 0.0609 0.0179 -0.2345 0.2213 -0.0569 -0.0223 'X-RAY DIFFRACTION' 2 ? ? ? ? ? 0.1971 0.1722 0.3592 0.0588 -0.0110 0.0151 0.6265 1.7647 2.5814 -1.5344 0.5410 1.2040 -0.1966 -0.0234 0.2578 -0.1541 0.1499 0.0433 -0.5402 -0.3658 0.0192 'X-RAY DIFFRACTION' 3 ? ? ? ? ? 0.2881 0.4294 0.6417 -0.0944 -0.0415 0.1095 0.1423 2.1115 7.9928 0.3169 2.2099 -0.6599 -0.0450 -0.1928 0.1406 -0.1281 -0.2953 0.3969 0.3031 -0.7767 0.2746 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? 'chain A' 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? 'chain B' 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? 'chain C' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B LYS 61 ? B LYS 50 2 1 Y 1 C GLY 618 ? C GLY 1 3 1 Y 1 C SER 619 ? C SER 2 4 1 Y 1 C PRO 620 ? C PRO 3 5 1 Y 1 C GLU 621 ? C GLU 4 6 1 Y 1 C PHE 622 ? C PHE 5 7 1 Y 1 C VAL 623 ? C VAL 6 8 1 Y 1 C GLN 624 ? C GLN 7 9 1 Y 1 C GLY 625 ? C GLY 8 10 1 Y 1 C ASN 626 ? C ASN 9 11 1 Y 1 C THR 627 ? C THR 10 12 1 Y 1 C PRO 655 ? C PRO 38 13 1 Y 1 C LEU 656 ? C LEU 39 14 1 Y 1 C GLU 657 ? C GLU 40 15 1 Y 1 C LYS 658 ? C LYS 41 16 1 Y 1 C SER 659 ? C SER 42 17 1 Y 1 C THR 660 ? C THR 43 18 1 Y 1 C LYS 661 ? C LYS 44 19 1 Y 1 C LEU 662 ? C LEU 45 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 ZN ZN ZN N N 391 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _atom_sites.entry_id 3IM4 _atom_sites.fract_transf_matrix[1][1] 0.024752 _atom_sites.fract_transf_matrix[1][2] -0.000000 _atom_sites.fract_transf_matrix[1][3] -0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017851 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017547 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S ZN # loop_