HEADER CHAPERONE 13-AUG-09 3IO3 TITLE GET3 WITH ADP FROM D. HANSENII IN CLOSED FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: DEHA2D07832P; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DEBARYOMYCES HANSENII; SOURCE 3 ORGANISM_COMMON: YEAST; SOURCE 4 ORGANISM_TAXID: 4959; SOURCE 5 GENE: DEHA2D07832G; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28B KEYWDS CHAPERONE, MEMBRANE TRAFFIC, ATPASE EXPDTA X-RAY DIFFRACTION AUTHOR J.HU,J.LI,X.QIAN,B.SHA REVDAT 3 06-SEP-23 3IO3 1 REMARK REVDAT 2 13-JUL-11 3IO3 1 VERSN REVDAT 1 22-DEC-09 3IO3 0 JRNL AUTH J.HU,J.LI,X.QIAN,V.DENIC,B.SHA JRNL TITL THE CRYSTAL STRUCTURES OF YEAST GET3 SUGGEST A MECHANISM FOR JRNL TITL 2 TAIL-ANCHORED PROTEIN MEMBRANE INSERTION JRNL REF PLOS ONE V. 4 E8061 2009 JRNL REFN ESSN 1932-6203 JRNL PMID 19956640 JRNL DOI 10.1371/JOURNAL.PONE.0008061 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.50 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 92.0 REMARK 3 NUMBER OF REFLECTIONS : 49282 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.233 REMARK 3 R VALUE (WORKING SET) : 0.233 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2666 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2653 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 67.75 REMARK 3 BIN R VALUE (WORKING SET) : 0.3850 REMARK 3 BIN FREE R VALUE SET COUNT : 126 REMARK 3 BIN FREE R VALUE : 0.3220 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1839 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 48 REMARK 3 SOLVENT ATOMS : 188 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.47 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.04000 REMARK 3 B22 (A**2) : -0.04000 REMARK 3 B33 (A**2) : 0.08000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.099 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.096 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.088 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.031 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.939 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.932 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1929 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2606 ; 1.327 ; 2.000 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 230 ; 5.642 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 86 ;36.237 ;25.465 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 349 ;12.143 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;25.592 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 292 ; 0.087 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1403 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 900 ; 0.203 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1324 ; 0.308 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 165 ; 0.143 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 69 ; 0.212 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 27 ; 0.162 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1151 ; 0.708 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1867 ; 1.294 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 799 ; 1.840 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 737 ; 2.860 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3IO3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-AUG-09. REMARK 100 THE DEPOSITION ID IS D_1000054651. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-MAY-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52368 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.0 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : 0.03900 REMARK 200 R SYM (I) : 0.03900 REMARK 200 FOR THE DATA SET : 42.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 65.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.50 REMARK 200 R MERGE FOR SHELL (I) : 0.15500 REMARK 200 R SYM FOR SHELL (I) : 0.15500 REMARK 200 FOR SHELL : 32.00 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3H84 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: GLYCEROL 20%, 0.2M AMMONIUM PHOSPHATE REMARK 280 MONO BASE, PH 5.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 29.92550 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.64600 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 115.29450 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 29.92550 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.64600 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 115.29450 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 29.92550 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 43.64600 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 115.29450 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 29.92550 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 43.64600 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 115.29450 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7770 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19000 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -191.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 59.85100 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 87.29200 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 91 REMARK 465 ALA A 92 REMARK 465 ALA A 93 REMARK 465 MET A 94 REMARK 465 SER A 95 REMARK 465 ASP A 96 REMARK 465 LEU A 97 REMARK 465 GLN A 98 REMARK 465 GLN A 99 REMARK 465 GLN A 100 REMARK 465 ALA A 101 REMARK 465 SER A 102 REMARK 465 GLN A 103 REMARK 465 TYR A 104 REMARK 465 ASN A 105 REMARK 465 ASN A 106 REMARK 465 ASP A 107 REMARK 465 PRO A 108 REMARK 465 ASN A 109 REMARK 465 ASP A 110 REMARK 465 PRO A 111 REMARK 465 LEU A 112 REMARK 465 LYS A 113 REMARK 465 SER A 114 REMARK 465 MET A 115 REMARK 465 MET A 116 REMARK 465 SER A 117 REMARK 465 ASP A 118 REMARK 465 MET A 119 REMARK 465 THR A 120 REMARK 465 GLY A 121 REMARK 465 SER A 122 REMARK 465 ILE A 123 REMARK 465 PRO A 124 REMARK 465 GLY A 125 REMARK 465 ILE A 126 REMARK 465 ASP A 127 REMARK 465 GLU A 128 REMARK 465 ALA A 129 REMARK 465 LEU A 130 REMARK 465 SER A 131 REMARK 465 PHE A 132 REMARK 465 MET A 133 REMARK 465 GLU A 134 REMARK 465 VAL A 135 REMARK 465 LEU A 136 REMARK 465 LYS A 137 REMARK 465 HIS A 138 REMARK 465 ILE A 139 REMARK 465 LYS A 140 REMARK 465 ASN A 141 REMARK 465 GLN A 142 REMARK 465 LYS A 143 REMARK 465 VAL A 144 REMARK 465 LEU A 145 REMARK 465 GLU A 146 REMARK 465 GLY A 147 REMARK 465 GLU A 148 REMARK 465 ASP A 149 REMARK 465 ASN A 150 REMARK 465 SER A 151 REMARK 465 ASN A 152 REMARK 465 ALA A 153 REMARK 465 ILE A 154 REMARK 465 SER A 155 REMARK 465 LEU A 175 REMARK 465 PRO A 176 REMARK 465 SER A 177 REMARK 465 THR A 178 REMARK 465 LEU A 179 REMARK 465 GLU A 180 REMARK 465 LYS A 181 REMARK 465 LEU A 182 REMARK 465 LEU A 183 REMARK 465 SER A 184 REMARK 465 LYS A 185 REMARK 465 PHE A 186 REMARK 465 LYS A 187 REMARK 465 ASP A 188 REMARK 465 LEU A 189 REMARK 465 SER A 190 REMARK 465 GLY A 191 REMARK 465 LYS A 192 REMARK 465 LEU A 193 REMARK 465 GLY A 194 REMARK 465 PRO A 195 REMARK 465 MET A 196 REMARK 465 LEU A 197 REMARK 465 SER A 198 REMARK 465 MET A 199 REMARK 465 MET A 200 REMARK 465 GLY A 201 REMARK 465 GLY A 202 REMARK 465 GLY A 203 REMARK 465 GLN A 204 REMARK 465 GLN A 205 REMARK 465 GLN A 206 REMARK 465 ASP A 207 REMARK 465 ILE A 208 REMARK 465 PHE A 209 REMARK 465 GLU A 210 REMARK 465 LYS A 211 REMARK 465 LEU A 212 REMARK 465 ASN A 213 REMARK 465 GLU A 214 REMARK 465 VAL A 215 REMARK 465 GLN A 216 REMARK 465 LYS A 217 REMARK 465 ASN A 218 REMARK 465 VAL A 219 REMARK 465 GLY A 275 REMARK 465 ASP A 276 REMARK 465 ASP A 277 REMARK 465 HIS A 278 REMARK 465 SER A 279 REMARK 465 GLU A 347 REMARK 465 LYS A 348 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 283 CB CYS A 283 SG -0.108 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 269 33.30 71.42 REMARK 500 PHE A 272 164.18 69.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 349 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 280 SG REMARK 620 2 CYS A 283 SG 101.0 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A 590 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 349 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 968 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 351 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 352 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 353 DBREF 3IO3 A 1 348 UNP Q6BSM0 Q6BSM0_DEBHA 1 348 SEQRES 1 A 348 MET ASP LEU GLU LEU GLU PRO THR LEU GLU SER ILE VAL SEQRES 2 A 348 GLN HIS ASP SER LEU LYS TRP ILE PHE VAL GLY GLY LYS SEQRES 3 A 348 GLY GLY VAL GLY LYS THR THR THR SER SER SER VAL ALA SEQRES 4 A 348 VAL GLN LEU ALA LEU ALA GLN PRO ASN GLU GLN PHE LEU SEQRES 5 A 348 LEU ILE SER THR ASP PRO ALA HIS ASN LEU SER ASP ALA SEQRES 6 A 348 PHE CYS GLN LYS PHE GLY LYS ASP ALA ARG LYS VAL GLU SEQRES 7 A 348 GLY LEU PRO ASN LEU SER CYS MET GLU ILE ASP PRO GLU SEQRES 8 A 348 ALA ALA MET SER ASP LEU GLN GLN GLN ALA SER GLN TYR SEQRES 9 A 348 ASN ASN ASP PRO ASN ASP PRO LEU LYS SER MET MET SER SEQRES 10 A 348 ASP MET THR GLY SER ILE PRO GLY ILE ASP GLU ALA LEU SEQRES 11 A 348 SER PHE MET GLU VAL LEU LYS HIS ILE LYS ASN GLN LYS SEQRES 12 A 348 VAL LEU GLU GLY GLU ASP ASN SER ASN ALA ILE SER TYR SEQRES 13 A 348 LYS THR ILE ILE PHE ASP THR ALA PRO THR GLY HIS THR SEQRES 14 A 348 LEU ARG PHE LEU GLN LEU PRO SER THR LEU GLU LYS LEU SEQRES 15 A 348 LEU SER LYS PHE LYS ASP LEU SER GLY LYS LEU GLY PRO SEQRES 16 A 348 MET LEU SER MET MET GLY GLY GLY GLN GLN GLN ASP ILE SEQRES 17 A 348 PHE GLU LYS LEU ASN GLU VAL GLN LYS ASN VAL SER GLU SEQRES 18 A 348 VAL ASN GLU GLN PHE THR ASN PRO GLU LEU THR THR PHE SEQRES 19 A 348 ILE CYS VAL CYS ILE SER GLU PHE LEU SER LEU TYR GLU SEQRES 20 A 348 THR GLU ARG MET ILE GLN GLU LEU MET SER TYR ASN MET SEQRES 21 A 348 ASP VAL ASN SER ILE VAL VAL ASN GLN LEU LEU PHE ALA SEQRES 22 A 348 GLU GLY ASP ASP HIS SER CYS LYS ARG CYS GLU SER ARG SEQRES 23 A 348 TRP LYS MET GLN LYS LYS TYR LEU ASP GLN MET GLY GLU SEQRES 24 A 348 LEU TYR GLU ASP TYR HIS LEU VAL LYS MET PRO LEU LEU SEQRES 25 A 348 GLY CYS GLU ILE ARG GLY VAL GLU ASN LEU LYS LYS PHE SEQRES 26 A 348 SER LYS PHE LEU LEU LYS PRO TYR ASP PRO LYS ALA ASP SEQRES 27 A 348 SER ASP ILE VAL PHE ASP LEU GLU GLU LYS HET ADP A 590 27 HET ZN A 349 1 HET MG A 350 1 HET GOL A 968 6 HET GOL A 351 6 HET GOL A 352 6 HET NA A 353 1 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM ZN ZINC ION HETNAM MG MAGNESIUM ION HETNAM GOL GLYCEROL HETNAM NA SODIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 ADP C10 H15 N5 O10 P2 FORMUL 3 ZN ZN 2+ FORMUL 4 MG MG 2+ FORMUL 5 GOL 3(C3 H8 O3) FORMUL 8 NA NA 1+ FORMUL 9 HOH *188(H2 O) HELIX 1 1 LEU A 9 GLN A 14 1 6 HELIX 2 2 GLY A 30 GLN A 46 1 17 HELIX 3 3 HIS A 60 CYS A 67 1 8 HELIX 4 4 PRO A 165 LEU A 173 1 9 HELIX 5 5 SER A 220 THR A 227 1 8 HELIX 6 6 GLU A 241 TYR A 258 1 18 HELIX 7 7 CYS A 280 TYR A 301 1 22 HELIX 8 8 GLY A 318 LYS A 331 1 14 HELIX 9 9 ASP A 338 ASP A 344 5 7 SHEET 1 A 8 ARG A 75 VAL A 77 0 SHEET 2 A 8 LEU A 80 GLU A 87 -1 O LEU A 83 N VAL A 77 SHEET 3 A 8 PHE A 51 SER A 55 1 N PHE A 51 O ASN A 82 SHEET 4 A 8 THR A 158 ASP A 162 1 O ILE A 160 N LEU A 52 SHEET 5 A 8 TRP A 20 GLY A 24 1 N ILE A 21 O ILE A 159 SHEET 6 A 8 THR A 232 ILE A 239 1 O ILE A 235 N PHE A 22 SHEET 7 A 8 SER A 264 LEU A 270 1 O VAL A 266 N CYS A 236 SHEET 8 A 8 HIS A 305 PRO A 310 1 O VAL A 307 N VAL A 267 LINK SG CYS A 280 ZN ZN A 349 1555 1555 2.08 LINK SG CYS A 283 ZN ZN A 349 1555 1555 2.48 CISPEP 1 ALA A 164 PRO A 165 0 -11.36 SITE 1 AC1 25 LYS A 26 GLY A 28 VAL A 29 GLY A 30 SITE 2 AC1 25 LYS A 31 THR A 32 THR A 33 GLU A 241 SITE 3 AC1 25 LEU A 243 ASN A 268 PRO A 310 LEU A 311 SITE 4 AC1 25 LEU A 312 CYS A 314 GLU A 315 ILE A 316 SITE 5 AC1 25 PHE A 325 HOH A 375 HOH A 413 HOH A 417 SITE 6 AC1 25 HOH A 426 HOH A 477 HOH A 486 HOH A 501 SITE 7 AC1 25 HOH A 532 SITE 1 AC2 2 CYS A 280 CYS A 283 SITE 1 AC3 8 GLY A 25 LYS A 26 PRO A 58 GLY A 167 SITE 2 AC3 8 GLU A 247 HOH A 368 HOH A 386 HOH A 387 SITE 1 AC4 3 VAL A 262 ASP A 303 TYR A 304 SITE 1 AC5 7 SER A 63 ASP A 64 CYS A 67 LYS A 69 SITE 2 AC5 7 ARG A 317 HOH A 389 HOH A 409 SITE 1 AC6 1 MET A 256 CRYST1 59.851 87.292 230.589 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016708 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011456 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004337 0.00000