data_3IQL # _entry.id 3IQL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.378 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3IQL pdb_00003iql 10.2210/pdb3iql/pdb RCSB RCSB054741 ? ? WWPDB D_1000054741 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2knb _pdbx_database_related.details 'Solution NMR structure of the complex formed by the endophilin-A1 SH3 domain and the parkin Ubl domain' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3IQL _pdbx_database_status.recvd_initial_deposition_date 2009-08-20 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Trempe, J.F.' 1 'Kozlov, G.' 2 'Camacho, E.M.' 3 'Gehring, K.' 4 # _citation.id primary _citation.title 'SH3 domains from a subset of BAR proteins define a Ubl-binding domain and implicate parkin in synaptic ubiquitination.' _citation.journal_abbrev Mol.Cell _citation.journal_volume 36 _citation.page_first 1034 _citation.page_last 1047 _citation.year 2009 _citation.journal_id_ASTM MOCEFL _citation.country US _citation.journal_id_ISSN 1097-2765 _citation.journal_id_CSD 2168 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20064468 _citation.pdbx_database_id_DOI 10.1016/j.molcel.2009.11.021 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Trempe, J.F.' 1 ? primary 'Chen, C.X.' 2 ? primary 'Grenier, K.' 3 ? primary 'Camacho, E.M.' 4 ? primary 'Kozlov, G.' 5 ? primary 'McPherson, P.S.' 6 ? primary 'Gehring, K.' 7 ? primary 'Fon, E.A.' 8 ? # _cell.entry_id 3IQL _cell.length_a 64.338 _cell.length_b 34.156 _cell.length_c 62.729 _cell.angle_alpha 90.00 _cell.angle_beta 107.79 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3IQL _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Endophilin-A1 7981.790 2 ? ? ? ? 2 non-polymer syn 'CHLORIDE ION' 35.453 2 ? ? ? ? 3 water nat water 18.015 192 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Endophilin-1, SH3 domain-containing GRB2-like protein 2, SH3 domain protein 2A, SH3p4' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GSRRASVGSDQPCCRALYDFEPENEGELGFKEGDIITLTNQIDENWYEGMLHGQSGFFPINYVEILVALPH _entity_poly.pdbx_seq_one_letter_code_can GSRRASVGSDQPCCRALYDFEPENEGELGFKEGDIITLTNQIDENWYEGMLHGQSGFFPINYVEILVALPH _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 ARG n 1 4 ARG n 1 5 ALA n 1 6 SER n 1 7 VAL n 1 8 GLY n 1 9 SER n 1 10 ASP n 1 11 GLN n 1 12 PRO n 1 13 CYS n 1 14 CYS n 1 15 ARG n 1 16 ALA n 1 17 LEU n 1 18 TYR n 1 19 ASP n 1 20 PHE n 1 21 GLU n 1 22 PRO n 1 23 GLU n 1 24 ASN n 1 25 GLU n 1 26 GLY n 1 27 GLU n 1 28 LEU n 1 29 GLY n 1 30 PHE n 1 31 LYS n 1 32 GLU n 1 33 GLY n 1 34 ASP n 1 35 ILE n 1 36 ILE n 1 37 THR n 1 38 LEU n 1 39 THR n 1 40 ASN n 1 41 GLN n 1 42 ILE n 1 43 ASP n 1 44 GLU n 1 45 ASN n 1 46 TRP n 1 47 TYR n 1 48 GLU n 1 49 GLY n 1 50 MET n 1 51 LEU n 1 52 HIS n 1 53 GLY n 1 54 GLN n 1 55 SER n 1 56 GLY n 1 57 PHE n 1 58 PHE n 1 59 PRO n 1 60 ILE n 1 61 ASN n 1 62 TYR n 1 63 VAL n 1 64 GLU n 1 65 ILE n 1 66 LEU n 1 67 VAL n 1 68 ALA n 1 69 LEU n 1 70 PRO n 1 71 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'brown rat,rat,rats' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Sh3d2a, Sh3gl2, Sh3p4' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Rattus norvegicus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10116 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'K12 BL21 DE3' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGEX-2TK _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SH3G2_RAT _struct_ref.pdbx_db_accession O35179 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code DQPCCRALYDFEPENEGELGFKEGDIITLTNQIDENWYEGMLHGQSGFFPINYVEILVALPH _struct_ref.pdbx_align_begin 291 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3IQL A 10 ? 71 ? O35179 291 ? 352 ? 291 352 2 1 3IQL B 10 ? 71 ? O35179 291 ? 352 ? 291 352 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3IQL GLY A 1 ? UNP O35179 ? ? 'expression tag' 282 1 1 3IQL SER A 2 ? UNP O35179 ? ? 'expression tag' 283 2 1 3IQL ARG A 3 ? UNP O35179 ? ? 'expression tag' 284 3 1 3IQL ARG A 4 ? UNP O35179 ? ? 'expression tag' 285 4 1 3IQL ALA A 5 ? UNP O35179 ? ? 'expression tag' 286 5 1 3IQL SER A 6 ? UNP O35179 ? ? 'expression tag' 287 6 1 3IQL VAL A 7 ? UNP O35179 ? ? 'expression tag' 288 7 1 3IQL GLY A 8 ? UNP O35179 ? ? 'expression tag' 289 8 1 3IQL SER A 9 ? UNP O35179 ? ? 'expression tag' 290 9 2 3IQL GLY B 1 ? UNP O35179 ? ? 'expression tag' 282 10 2 3IQL SER B 2 ? UNP O35179 ? ? 'expression tag' 283 11 2 3IQL ARG B 3 ? UNP O35179 ? ? 'expression tag' 284 12 2 3IQL ARG B 4 ? UNP O35179 ? ? 'expression tag' 285 13 2 3IQL ALA B 5 ? UNP O35179 ? ? 'expression tag' 286 14 2 3IQL SER B 6 ? UNP O35179 ? ? 'expression tag' 287 15 2 3IQL VAL B 7 ? UNP O35179 ? ? 'expression tag' 288 16 2 3IQL GLY B 8 ? UNP O35179 ? ? 'expression tag' 289 17 2 3IQL SER B 9 ? UNP O35179 ? ? 'expression tag' 290 18 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3IQL _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.06 _exptl_crystal.density_percent_sol 40.16 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pdbx_details ;20% methyl-2,4-pentanediol, 0.1M sodium acetate, 0.05M calcium chloride, 10mM 2-mercaptoethanol, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 277K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2007-11-02 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97720 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'CHESS BEAMLINE A1' _diffrn_source.pdbx_synchrotron_site CHESS _diffrn_source.pdbx_synchrotron_beamline A1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97720 # _reflns.entry_id 3IQL _reflns.observed_criterion_sigma_I 2 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30 _reflns.d_resolution_high 1.4 _reflns.number_obs 23667 _reflns.number_all 24510 _reflns.percent_possible_obs 96.3 _reflns.pdbx_Rmerge_I_obs 0.031 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 30.2 _reflns.B_iso_Wilson_estimate 8.5 _reflns.pdbx_redundancy 3.0 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.4 _reflns_shell.d_res_low 1.5 _reflns_shell.percent_possible_all 85.5 _reflns_shell.Rmerge_I_obs 0.071 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 11.1 _reflns_shell.pdbx_redundancy 1.9 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 4701 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3IQL _refine.ls_number_reflns_obs 23667 _refine.ls_number_reflns_all 24901 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.00 _refine.ls_d_res_high 1.40 _refine.ls_percent_reflns_obs 96.56 _refine.ls_R_factor_obs 0.12837 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.12702 _refine.ls_R_factor_R_free 0.15358 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1234 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.973 _refine.correlation_coeff_Fo_to_Fc_free 0.963 _refine.B_iso_mean 13.739 _refine.aniso_B[1][1] 1.00 _refine.aniso_B[2][2] -0.27 _refine.aniso_B[3][3] -0.65 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.14 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB entry 1GCQ, chain A, Non-conserved residue pruned to CB atom using CHAINSAW' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.064 _refine.pdbx_overall_ESU_R_Free 0.053 _refine.overall_SU_ML 0.028 _refine.overall_SU_B 1.467 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3IQL _refine_analyze.Luzzati_coordinate_error_obs 0.151 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs 1.4 _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1174 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 192 _refine_hist.number_atoms_total 1368 _refine_hist.d_res_high 1.40 _refine_hist.d_res_low 30.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.012 0.022 ? 1225 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.402 1.961 ? 1702 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.311 5.000 ? 170 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 34.769 26.528 ? 72 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.004 15.000 ? 196 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 22.324 15.000 ? 2 'X-RAY DIFFRACTION' ? r_chiral_restr 0.102 0.200 ? 179 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.020 ? 1025 'X-RAY DIFFRACTION' ? r_nbd_refined 0.219 0.200 ? 524 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.322 0.200 ? 849 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.193 0.200 ? 147 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.180 0.200 ? 48 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.173 0.200 ? 26 'X-RAY DIFFRACTION' ? r_mcbond_it 1.405 1.500 ? 751 'X-RAY DIFFRACTION' ? r_mcangle_it 2.004 2.000 ? 1206 'X-RAY DIFFRACTION' ? r_scbond_it 3.697 3.000 ? 534 'X-RAY DIFFRACTION' ? r_scangle_it 3.908 4.500 ? 478 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 3.433 3.000 ? 1285 'X-RAY DIFFRACTION' ? r_sphericity_free 6.116 3.000 ? 194 'X-RAY DIFFRACTION' ? r_sphericity_bonded 3.734 3.000 ? 1174 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.400 _refine_ls_shell.d_res_low 1.436 _refine_ls_shell.number_reflns_R_work 1284 _refine_ls_shell.R_factor_R_work 0.090 _refine_ls_shell.percent_reflns_obs 72.86 _refine_ls_shell.R_factor_R_free 0.173 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 64 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3IQL _struct.title 'Crystal structure of the rat endophilin-A1 SH3 domain' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3IQL _struct_keywords.pdbx_keywords 'PROTEIN BINDING' _struct_keywords.text 'SH3, endophilin, Coiled coil, Cytoplasm, Endocytosis, Lipid-binding, Membrane, Phosphoprotein, SH3 domain, PROTEIN BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 54 ? PRO A 59 ? GLN A 335 PRO A 340 A 2 TRP A 46 ? LEU A 51 ? TRP A 327 LEU A 332 A 3 ILE A 35 ? GLN A 41 ? ILE A 316 GLN A 322 A 4 CYS A 13 ? ALA A 16 ? CYS A 294 ALA A 297 A 5 VAL A 63 ? VAL A 67 ? VAL A 344 VAL A 348 B 1 GLN B 54 ? PRO B 59 ? GLN B 335 PRO B 340 B 2 TRP B 46 ? LEU B 51 ? TRP B 327 LEU B 332 B 3 ILE B 35 ? GLN B 41 ? ILE B 316 GLN B 322 B 4 CYS B 13 ? ALA B 16 ? CYS B 294 ALA B 297 B 5 VAL B 63 ? VAL B 67 ? VAL B 344 VAL B 348 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O PHE A 58 ? O PHE A 339 N TYR A 47 ? N TYR A 328 A 2 3 O GLU A 48 ? O GLU A 329 N ASN A 40 ? N ASN A 321 A 3 4 O ILE A 36 ? O ILE A 317 N CYS A 14 ? N CYS A 295 A 4 5 N ARG A 15 ? N ARG A 296 O GLU A 64 ? O GLU A 345 B 1 2 O PHE B 58 ? O PHE B 339 N TYR B 47 ? N TYR B 328 B 2 3 O GLU B 48 ? O GLU B 329 N ASN B 40 ? N ASN B 321 B 3 4 O ILE B 36 ? O ILE B 317 N CYS B 14 ? N CYS B 295 B 4 5 N ARG B 15 ? N ARG B 296 O GLU B 64 ? O GLU B 345 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CL 1 ? 6 'BINDING SITE FOR RESIDUE CL A 1' AC2 Software B CL 2 ? 5 'BINDING SITE FOR RESIDUE CL B 2' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 HIS A 71 ? HIS A 352 . ? 1_555 ? 2 AC1 6 HOH F . ? HOH B 168 . ? 1_545 ? 3 AC1 6 GLU B 21 ? GLU B 302 . ? 4_446 ? 4 AC1 6 LYS B 31 ? LYS B 312 . ? 4_446 ? 5 AC1 6 GLU B 64 ? GLU B 345 . ? 1_545 ? 6 AC1 6 ILE B 65 ? ILE B 346 . ? 1_545 ? 7 AC2 5 GLU A 21 ? GLU A 302 . ? 4_455 ? 8 AC2 5 LYS A 31 ? LYS A 312 . ? 4_455 ? 9 AC2 5 GLU A 64 ? GLU A 345 . ? 1_565 ? 10 AC2 5 ILE A 65 ? ILE A 346 . ? 1_565 ? 11 AC2 5 HIS B 71 ? HIS B 352 . ? 1_555 ? # _database_PDB_matrix.entry_id 3IQL _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3IQL _atom_sites.fract_transf_matrix[1][1] 0.015543 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004987 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.029277 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016742 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 282 ? ? ? A . n A 1 2 SER 2 283 ? ? ? A . n A 1 3 ARG 3 284 ? ? ? A . n A 1 4 ARG 4 285 ? ? ? A . n A 1 5 ALA 5 286 ? ? ? A . n A 1 6 SER 6 287 287 SER ALA A . n A 1 7 VAL 7 288 288 VAL VAL A . n A 1 8 GLY 8 289 289 GLY GLY A . n A 1 9 SER 9 290 290 SER SER A . n A 1 10 ASP 10 291 291 ASP ASP A . n A 1 11 GLN 11 292 292 GLN GLN A . n A 1 12 PRO 12 293 293 PRO PRO A . n A 1 13 CYS 13 294 294 CYS CYS A . n A 1 14 CYS 14 295 295 CYS CYS A . n A 1 15 ARG 15 296 296 ARG ARG A . n A 1 16 ALA 16 297 297 ALA ALA A . n A 1 17 LEU 17 298 298 LEU LEU A . n A 1 18 TYR 18 299 299 TYR TYR A . n A 1 19 ASP 19 300 300 ASP ASP A . n A 1 20 PHE 20 301 301 PHE PHE A . n A 1 21 GLU 21 302 302 GLU GLU A . n A 1 22 PRO 22 303 303 PRO PRO A . n A 1 23 GLU 23 304 304 GLU GLU A . n A 1 24 ASN 24 305 305 ASN ASN A . n A 1 25 GLU 25 306 306 GLU GLU A . n A 1 26 GLY 26 307 307 GLY GLY A . n A 1 27 GLU 27 308 308 GLU GLU A . n A 1 28 LEU 28 309 309 LEU LEU A . n A 1 29 GLY 29 310 310 GLY GLY A . n A 1 30 PHE 30 311 311 PHE PHE A . n A 1 31 LYS 31 312 312 LYS LYS A . n A 1 32 GLU 32 313 313 GLU GLU A . n A 1 33 GLY 33 314 314 GLY GLY A . n A 1 34 ASP 34 315 315 ASP ASP A . n A 1 35 ILE 35 316 316 ILE ILE A . n A 1 36 ILE 36 317 317 ILE ILE A . n A 1 37 THR 37 318 318 THR THR A . n A 1 38 LEU 38 319 319 LEU LEU A . n A 1 39 THR 39 320 320 THR THR A . n A 1 40 ASN 40 321 321 ASN ASN A . n A 1 41 GLN 41 322 322 GLN GLN A . n A 1 42 ILE 42 323 323 ILE ILE A . n A 1 43 ASP 43 324 324 ASP ASP A . n A 1 44 GLU 44 325 325 GLU GLU A . n A 1 45 ASN 45 326 326 ASN ASN A . n A 1 46 TRP 46 327 327 TRP TRP A . n A 1 47 TYR 47 328 328 TYR TYR A . n A 1 48 GLU 48 329 329 GLU GLU A . n A 1 49 GLY 49 330 330 GLY GLY A . n A 1 50 MET 50 331 331 MET MET A . n A 1 51 LEU 51 332 332 LEU LEU A . n A 1 52 HIS 52 333 333 HIS HIS A . n A 1 53 GLY 53 334 334 GLY GLY A . n A 1 54 GLN 54 335 335 GLN GLN A . n A 1 55 SER 55 336 336 SER SER A . n A 1 56 GLY 56 337 337 GLY GLY A . n A 1 57 PHE 57 338 338 PHE PHE A . n A 1 58 PHE 58 339 339 PHE PHE A . n A 1 59 PRO 59 340 340 PRO PRO A . n A 1 60 ILE 60 341 341 ILE ILE A . n A 1 61 ASN 61 342 342 ASN ASN A . n A 1 62 TYR 62 343 343 TYR TYR A . n A 1 63 VAL 63 344 344 VAL VAL A . n A 1 64 GLU 64 345 345 GLU GLU A . n A 1 65 ILE 65 346 346 ILE ILE A . n A 1 66 LEU 66 347 347 LEU LEU A . n A 1 67 VAL 67 348 348 VAL VAL A . n A 1 68 ALA 68 349 349 ALA ALA A . n A 1 69 LEU 69 350 350 LEU LEU A . n A 1 70 PRO 70 351 351 PRO PRO A . n A 1 71 HIS 71 352 352 HIS HIS A . n B 1 1 GLY 1 282 ? ? ? B . n B 1 2 SER 2 283 ? ? ? B . n B 1 3 ARG 3 284 ? ? ? B . n B 1 4 ARG 4 285 ? ? ? B . n B 1 5 ALA 5 286 286 ALA ALA B . n B 1 6 SER 6 287 287 SER ALA B . n B 1 7 VAL 7 288 288 VAL VAL B . n B 1 8 GLY 8 289 289 GLY GLY B . n B 1 9 SER 9 290 290 SER SER B . n B 1 10 ASP 10 291 291 ASP ASP B . n B 1 11 GLN 11 292 292 GLN GLN B . n B 1 12 PRO 12 293 293 PRO PRO B . n B 1 13 CYS 13 294 294 CYS CYS B . n B 1 14 CYS 14 295 295 CYS CYS B . n B 1 15 ARG 15 296 296 ARG ARG B . n B 1 16 ALA 16 297 297 ALA ALA B . n B 1 17 LEU 17 298 298 LEU LEU B . n B 1 18 TYR 18 299 299 TYR TYR B . n B 1 19 ASP 19 300 300 ASP ASP B . n B 1 20 PHE 20 301 301 PHE PHE B . n B 1 21 GLU 21 302 302 GLU GLU B . n B 1 22 PRO 22 303 303 PRO PRO B . n B 1 23 GLU 23 304 304 GLU GLU B . n B 1 24 ASN 24 305 305 ASN ASN B . n B 1 25 GLU 25 306 306 GLU GLU B . n B 1 26 GLY 26 307 307 GLY GLY B . n B 1 27 GLU 27 308 308 GLU GLU B . n B 1 28 LEU 28 309 309 LEU LEU B . n B 1 29 GLY 29 310 310 GLY GLY B . n B 1 30 PHE 30 311 311 PHE PHE B . n B 1 31 LYS 31 312 312 LYS LYS B . n B 1 32 GLU 32 313 313 GLU GLU B . n B 1 33 GLY 33 314 314 GLY GLY B . n B 1 34 ASP 34 315 315 ASP ASP B . n B 1 35 ILE 35 316 316 ILE ILE B . n B 1 36 ILE 36 317 317 ILE ILE B . n B 1 37 THR 37 318 318 THR THR B . n B 1 38 LEU 38 319 319 LEU LEU B . n B 1 39 THR 39 320 320 THR THR B . n B 1 40 ASN 40 321 321 ASN ASN B . n B 1 41 GLN 41 322 322 GLN GLN B . n B 1 42 ILE 42 323 323 ILE ILE B . n B 1 43 ASP 43 324 324 ASP ASP B . n B 1 44 GLU 44 325 325 GLU GLU B . n B 1 45 ASN 45 326 326 ASN ASN B . n B 1 46 TRP 46 327 327 TRP TRP B . n B 1 47 TYR 47 328 328 TYR TYR B . n B 1 48 GLU 48 329 329 GLU GLU B . n B 1 49 GLY 49 330 330 GLY GLY B . n B 1 50 MET 50 331 331 MET MET B . n B 1 51 LEU 51 332 332 LEU LEU B . n B 1 52 HIS 52 333 333 HIS HIS B . n B 1 53 GLY 53 334 334 GLY GLY B . n B 1 54 GLN 54 335 335 GLN GLN B . n B 1 55 SER 55 336 336 SER SER B . n B 1 56 GLY 56 337 337 GLY GLY B . n B 1 57 PHE 57 338 338 PHE PHE B . n B 1 58 PHE 58 339 339 PHE PHE B . n B 1 59 PRO 59 340 340 PRO PRO B . n B 1 60 ILE 60 341 341 ILE ILE B . n B 1 61 ASN 61 342 342 ASN ASN B . n B 1 62 TYR 62 343 343 TYR TYR B . n B 1 63 VAL 63 344 344 VAL VAL B . n B 1 64 GLU 64 345 345 GLU GLU B . n B 1 65 ILE 65 346 346 ILE ILE B . n B 1 66 LEU 66 347 347 LEU LEU B . n B 1 67 VAL 67 348 348 VAL VAL B . n B 1 68 ALA 68 349 349 ALA ALA B . n B 1 69 LEU 69 350 350 LEU LEU B . n B 1 70 PRO 70 351 351 PRO PRO B . n B 1 71 HIS 71 352 352 HIS HIS B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CL 1 1 1 CL CL A . D 2 CL 1 2 2 CL CL B . E 3 HOH 1 4 4 HOH HOH A . E 3 HOH 2 5 5 HOH HOH A . E 3 HOH 3 7 7 HOH HOH A . E 3 HOH 4 8 8 HOH HOH A . E 3 HOH 5 9 9 HOH HOH A . E 3 HOH 6 13 13 HOH HOH A . E 3 HOH 7 14 14 HOH HOH A . E 3 HOH 8 15 15 HOH HOH A . E 3 HOH 9 17 17 HOH HOH A . E 3 HOH 10 19 19 HOH HOH A . E 3 HOH 11 20 20 HOH HOH A . E 3 HOH 12 23 23 HOH HOH A . E 3 HOH 13 24 24 HOH HOH A . E 3 HOH 14 31 31 HOH HOH A . E 3 HOH 15 32 32 HOH HOH A . E 3 HOH 16 33 33 HOH HOH A . E 3 HOH 17 35 35 HOH HOH A . E 3 HOH 18 38 38 HOH HOH A . E 3 HOH 19 41 41 HOH HOH A . E 3 HOH 20 42 42 HOH HOH A . E 3 HOH 21 43 43 HOH HOH A . E 3 HOH 22 45 45 HOH HOH A . E 3 HOH 23 47 47 HOH HOH A . E 3 HOH 24 49 49 HOH HOH A . E 3 HOH 25 51 51 HOH HOH A . E 3 HOH 26 52 52 HOH HOH A . E 3 HOH 27 53 53 HOH HOH A . E 3 HOH 28 55 55 HOH HOH A . E 3 HOH 29 56 56 HOH HOH A . E 3 HOH 30 57 57 HOH HOH A . E 3 HOH 31 59 59 HOH HOH A . E 3 HOH 32 60 60 HOH HOH A . E 3 HOH 33 61 61 HOH HOH A . E 3 HOH 34 64 64 HOH HOH A . E 3 HOH 35 66 66 HOH HOH A . E 3 HOH 36 67 67 HOH HOH A . E 3 HOH 37 68 68 HOH HOH A . E 3 HOH 38 71 71 HOH HOH A . E 3 HOH 39 72 72 HOH HOH A . E 3 HOH 40 76 76 HOH HOH A . E 3 HOH 41 77 77 HOH HOH A . E 3 HOH 42 78 78 HOH HOH A . E 3 HOH 43 81 81 HOH HOH A . E 3 HOH 44 84 84 HOH HOH A . E 3 HOH 45 85 85 HOH HOH A . E 3 HOH 46 86 86 HOH HOH A . E 3 HOH 47 87 87 HOH HOH A . E 3 HOH 48 89 89 HOH HOH A . E 3 HOH 49 91 91 HOH HOH A . E 3 HOH 50 92 92 HOH HOH A . E 3 HOH 51 93 93 HOH HOH A . E 3 HOH 52 94 94 HOH HOH A . E 3 HOH 53 95 95 HOH HOH A . E 3 HOH 54 96 96 HOH HOH A . E 3 HOH 55 97 97 HOH HOH A . E 3 HOH 56 98 98 HOH HOH A . E 3 HOH 57 99 99 HOH HOH A . E 3 HOH 58 100 100 HOH HOH A . E 3 HOH 59 101 101 HOH HOH A . E 3 HOH 60 102 102 HOH HOH A . E 3 HOH 61 103 103 HOH HOH A . E 3 HOH 62 104 104 HOH HOH A . E 3 HOH 63 105 105 HOH HOH A . E 3 HOH 64 106 106 HOH HOH A . E 3 HOH 65 108 108 HOH HOH A . E 3 HOH 66 109 109 HOH HOH A . E 3 HOH 67 110 110 HOH HOH A . E 3 HOH 68 135 135 HOH HOH A . E 3 HOH 69 142 142 HOH HOH A . E 3 HOH 70 143 143 HOH HOH A . E 3 HOH 71 144 144 HOH HOH A . E 3 HOH 72 145 145 HOH HOH A . E 3 HOH 73 147 147 HOH HOH A . E 3 HOH 74 148 148 HOH HOH A . E 3 HOH 75 149 149 HOH HOH A . E 3 HOH 76 153 153 HOH HOH A . E 3 HOH 77 154 154 HOH HOH A . E 3 HOH 78 155 155 HOH HOH A . E 3 HOH 79 156 156 HOH HOH A . E 3 HOH 80 157 157 HOH HOH A . E 3 HOH 81 161 161 HOH HOH A . E 3 HOH 82 162 162 HOH HOH A . E 3 HOH 83 174 174 HOH HOH A . E 3 HOH 84 175 175 HOH HOH A . E 3 HOH 85 177 177 HOH HOH A . E 3 HOH 86 178 178 HOH HOH A . E 3 HOH 87 179 179 HOH HOH A . E 3 HOH 88 180 180 HOH HOH A . E 3 HOH 89 182 182 HOH HOH A . E 3 HOH 90 183 183 HOH HOH A . E 3 HOH 91 184 184 HOH HOH A . E 3 HOH 92 185 185 HOH HOH A . E 3 HOH 93 186 186 HOH HOH A . E 3 HOH 94 187 187 HOH HOH A . E 3 HOH 95 188 188 HOH HOH A . E 3 HOH 96 190 190 HOH HOH A . E 3 HOH 97 192 192 HOH HOH A . E 3 HOH 98 193 193 HOH HOH A . E 3 HOH 99 194 194 HOH HOH A . E 3 HOH 100 195 195 HOH HOH A . E 3 HOH 101 196 196 HOH HOH A . E 3 HOH 102 197 197 HOH HOH A . E 3 HOH 103 353 1 HOH HOH A . F 3 HOH 1 3 3 HOH HOH B . F 3 HOH 2 6 6 HOH HOH B . F 3 HOH 3 10 10 HOH HOH B . F 3 HOH 4 11 11 HOH HOH B . F 3 HOH 5 12 12 HOH HOH B . F 3 HOH 6 16 16 HOH HOH B . F 3 HOH 7 18 18 HOH HOH B . F 3 HOH 8 21 21 HOH HOH B . F 3 HOH 9 22 22 HOH HOH B . F 3 HOH 10 25 25 HOH HOH B . F 3 HOH 11 26 26 HOH HOH B . F 3 HOH 12 27 27 HOH HOH B . F 3 HOH 13 28 28 HOH HOH B . F 3 HOH 14 30 30 HOH HOH B . F 3 HOH 15 34 34 HOH HOH B . F 3 HOH 16 37 37 HOH HOH B . F 3 HOH 17 39 39 HOH HOH B . F 3 HOH 18 40 40 HOH HOH B . F 3 HOH 19 44 44 HOH HOH B . F 3 HOH 20 46 46 HOH HOH B . F 3 HOH 21 48 48 HOH HOH B . F 3 HOH 22 50 50 HOH HOH B . F 3 HOH 23 54 54 HOH HOH B . F 3 HOH 24 58 58 HOH HOH B . F 3 HOH 25 62 62 HOH HOH B . F 3 HOH 26 63 63 HOH HOH B . F 3 HOH 27 65 65 HOH HOH B . F 3 HOH 28 69 69 HOH HOH B . F 3 HOH 29 70 70 HOH HOH B . F 3 HOH 30 73 73 HOH HOH B . F 3 HOH 31 74 74 HOH HOH B . F 3 HOH 32 75 75 HOH HOH B . F 3 HOH 33 79 79 HOH HOH B . F 3 HOH 34 80 80 HOH HOH B . F 3 HOH 35 82 82 HOH HOH B . F 3 HOH 36 83 83 HOH HOH B . F 3 HOH 37 88 88 HOH HOH B . F 3 HOH 38 90 90 HOH HOH B . F 3 HOH 39 107 107 HOH HOH B . F 3 HOH 40 111 111 HOH HOH B . F 3 HOH 41 112 112 HOH HOH B . F 3 HOH 42 113 113 HOH HOH B . F 3 HOH 43 114 114 HOH HOH B . F 3 HOH 44 115 115 HOH HOH B . F 3 HOH 45 116 116 HOH HOH B . F 3 HOH 46 117 117 HOH HOH B . F 3 HOH 47 118 118 HOH HOH B . F 3 HOH 48 119 119 HOH HOH B . F 3 HOH 49 120 120 HOH HOH B . F 3 HOH 50 121 121 HOH HOH B . F 3 HOH 51 122 122 HOH HOH B . F 3 HOH 52 123 123 HOH HOH B . F 3 HOH 53 124 124 HOH HOH B . F 3 HOH 54 125 125 HOH HOH B . F 3 HOH 55 126 126 HOH HOH B . F 3 HOH 56 127 127 HOH HOH B . F 3 HOH 57 128 128 HOH HOH B . F 3 HOH 58 129 129 HOH HOH B . F 3 HOH 59 130 130 HOH HOH B . F 3 HOH 60 131 131 HOH HOH B . F 3 HOH 61 132 132 HOH HOH B . F 3 HOH 62 133 133 HOH HOH B . F 3 HOH 63 134 134 HOH HOH B . F 3 HOH 64 136 136 HOH HOH B . F 3 HOH 65 137 137 HOH HOH B . F 3 HOH 66 138 138 HOH HOH B . F 3 HOH 67 139 139 HOH HOH B . F 3 HOH 68 140 140 HOH HOH B . F 3 HOH 69 141 141 HOH HOH B . F 3 HOH 70 146 146 HOH HOH B . F 3 HOH 71 150 150 HOH HOH B . F 3 HOH 72 151 151 HOH HOH B . F 3 HOH 73 152 152 HOH HOH B . F 3 HOH 74 158 158 HOH HOH B . F 3 HOH 75 163 163 HOH HOH B . F 3 HOH 76 164 164 HOH HOH B . F 3 HOH 77 165 165 HOH HOH B . F 3 HOH 78 166 166 HOH HOH B . F 3 HOH 79 167 167 HOH HOH B . F 3 HOH 80 168 168 HOH HOH B . F 3 HOH 81 169 169 HOH HOH B . F 3 HOH 82 176 176 HOH HOH B . F 3 HOH 83 181 181 HOH HOH B . F 3 HOH 84 189 189 HOH HOH B . F 3 HOH 85 191 191 HOH HOH B . F 3 HOH 86 198 198 HOH HOH B . F 3 HOH 87 199 199 HOH HOH B . F 3 HOH 88 200 200 HOH HOH B . F 3 HOH 89 353 2 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,E 2 1 B,D,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 9 ? E HOH . 2 1 A HOH 195 ? E HOH . 3 1 B HOH 120 ? F HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-11-10 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_ref_seq_dif 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 MOLREP phasing . ? 2 REFMAC refinement 5.2.0019 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 86 ? ? O A HOH 92 ? ? 1.94 2 1 O A HOH 100 ? ? O A HOH 101 ? ? 2.12 3 1 O A HOH 53 ? ? O A HOH 91 ? ? 2.17 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 91 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 B _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 138 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 1_545 _pdbx_validate_symm_contact.dist 2.18 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASP _pdbx_validate_torsion.auth_asym_id B _pdbx_validate_torsion.auth_seq_id 324 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -157.96 _pdbx_validate_torsion.psi -158.72 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A SER 287 ? OG ? A SER 6 OG 2 1 Y 1 B SER 287 ? OG ? B SER 6 OG # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 282 ? A GLY 1 2 1 Y 1 A SER 283 ? A SER 2 3 1 Y 1 A ARG 284 ? A ARG 3 4 1 Y 1 A ARG 285 ? A ARG 4 5 1 Y 1 A ALA 286 ? A ALA 5 6 1 Y 1 B GLY 282 ? B GLY 1 7 1 Y 1 B SER 283 ? B SER 2 8 1 Y 1 B ARG 284 ? B ARG 3 9 1 Y 1 B ARG 285 ? B ARG 4 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CL CL CL N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 GLN N N N N 89 GLN CA C N S 90 GLN C C N N 91 GLN O O N N 92 GLN CB C N N 93 GLN CG C N N 94 GLN CD C N N 95 GLN OE1 O N N 96 GLN NE2 N N N 97 GLN OXT O N N 98 GLN H H N N 99 GLN H2 H N N 100 GLN HA H N N 101 GLN HB2 H N N 102 GLN HB3 H N N 103 GLN HG2 H N N 104 GLN HG3 H N N 105 GLN HE21 H N N 106 GLN HE22 H N N 107 GLN HXT H N N 108 GLU N N N N 109 GLU CA C N S 110 GLU C C N N 111 GLU O O N N 112 GLU CB C N N 113 GLU CG C N N 114 GLU CD C N N 115 GLU OE1 O N N 116 GLU OE2 O N N 117 GLU OXT O N N 118 GLU H H N N 119 GLU H2 H N N 120 GLU HA H N N 121 GLU HB2 H N N 122 GLU HB3 H N N 123 GLU HG2 H N N 124 GLU HG3 H N N 125 GLU HE2 H N N 126 GLU HXT H N N 127 GLY N N N N 128 GLY CA C N N 129 GLY C C N N 130 GLY O O N N 131 GLY OXT O N N 132 GLY H H N N 133 GLY H2 H N N 134 GLY HA2 H N N 135 GLY HA3 H N N 136 GLY HXT H N N 137 HIS N N N N 138 HIS CA C N S 139 HIS C C N N 140 HIS O O N N 141 HIS CB C N N 142 HIS CG C Y N 143 HIS ND1 N Y N 144 HIS CD2 C Y N 145 HIS CE1 C Y N 146 HIS NE2 N Y N 147 HIS OXT O N N 148 HIS H H N N 149 HIS H2 H N N 150 HIS HA H N N 151 HIS HB2 H N N 152 HIS HB3 H N N 153 HIS HD1 H N N 154 HIS HD2 H N N 155 HIS HE1 H N N 156 HIS HE2 H N N 157 HIS HXT H N N 158 HOH O O N N 159 HOH H1 H N N 160 HOH H2 H N N 161 ILE N N N N 162 ILE CA C N S 163 ILE C C N N 164 ILE O O N N 165 ILE CB C N S 166 ILE CG1 C N N 167 ILE CG2 C N N 168 ILE CD1 C N N 169 ILE OXT O N N 170 ILE H H N N 171 ILE H2 H N N 172 ILE HA H N N 173 ILE HB H N N 174 ILE HG12 H N N 175 ILE HG13 H N N 176 ILE HG21 H N N 177 ILE HG22 H N N 178 ILE HG23 H N N 179 ILE HD11 H N N 180 ILE HD12 H N N 181 ILE HD13 H N N 182 ILE HXT H N N 183 LEU N N N N 184 LEU CA C N S 185 LEU C C N N 186 LEU O O N N 187 LEU CB C N N 188 LEU CG C N N 189 LEU CD1 C N N 190 LEU CD2 C N N 191 LEU OXT O N N 192 LEU H H N N 193 LEU H2 H N N 194 LEU HA H N N 195 LEU HB2 H N N 196 LEU HB3 H N N 197 LEU HG H N N 198 LEU HD11 H N N 199 LEU HD12 H N N 200 LEU HD13 H N N 201 LEU HD21 H N N 202 LEU HD22 H N N 203 LEU HD23 H N N 204 LEU HXT H N N 205 LYS N N N N 206 LYS CA C N S 207 LYS C C N N 208 LYS O O N N 209 LYS CB C N N 210 LYS CG C N N 211 LYS CD C N N 212 LYS CE C N N 213 LYS NZ N N N 214 LYS OXT O N N 215 LYS H H N N 216 LYS H2 H N N 217 LYS HA H N N 218 LYS HB2 H N N 219 LYS HB3 H N N 220 LYS HG2 H N N 221 LYS HG3 H N N 222 LYS HD2 H N N 223 LYS HD3 H N N 224 LYS HE2 H N N 225 LYS HE3 H N N 226 LYS HZ1 H N N 227 LYS HZ2 H N N 228 LYS HZ3 H N N 229 LYS HXT H N N 230 MET N N N N 231 MET CA C N S 232 MET C C N N 233 MET O O N N 234 MET CB C N N 235 MET CG C N N 236 MET SD S N N 237 MET CE C N N 238 MET OXT O N N 239 MET H H N N 240 MET H2 H N N 241 MET HA H N N 242 MET HB2 H N N 243 MET HB3 H N N 244 MET HG2 H N N 245 MET HG3 H N N 246 MET HE1 H N N 247 MET HE2 H N N 248 MET HE3 H N N 249 MET HXT H N N 250 PHE N N N N 251 PHE CA C N S 252 PHE C C N N 253 PHE O O N N 254 PHE CB C N N 255 PHE CG C Y N 256 PHE CD1 C Y N 257 PHE CD2 C Y N 258 PHE CE1 C Y N 259 PHE CE2 C Y N 260 PHE CZ C Y N 261 PHE OXT O N N 262 PHE H H N N 263 PHE H2 H N N 264 PHE HA H N N 265 PHE HB2 H N N 266 PHE HB3 H N N 267 PHE HD1 H N N 268 PHE HD2 H N N 269 PHE HE1 H N N 270 PHE HE2 H N N 271 PHE HZ H N N 272 PHE HXT H N N 273 PRO N N N N 274 PRO CA C N S 275 PRO C C N N 276 PRO O O N N 277 PRO CB C N N 278 PRO CG C N N 279 PRO CD C N N 280 PRO OXT O N N 281 PRO H H N N 282 PRO HA H N N 283 PRO HB2 H N N 284 PRO HB3 H N N 285 PRO HG2 H N N 286 PRO HG3 H N N 287 PRO HD2 H N N 288 PRO HD3 H N N 289 PRO HXT H N N 290 SER N N N N 291 SER CA C N S 292 SER C C N N 293 SER O O N N 294 SER CB C N N 295 SER OG O N N 296 SER OXT O N N 297 SER H H N N 298 SER H2 H N N 299 SER HA H N N 300 SER HB2 H N N 301 SER HB3 H N N 302 SER HG H N N 303 SER HXT H N N 304 THR N N N N 305 THR CA C N S 306 THR C C N N 307 THR O O N N 308 THR CB C N R 309 THR OG1 O N N 310 THR CG2 C N N 311 THR OXT O N N 312 THR H H N N 313 THR H2 H N N 314 THR HA H N N 315 THR HB H N N 316 THR HG1 H N N 317 THR HG21 H N N 318 THR HG22 H N N 319 THR HG23 H N N 320 THR HXT H N N 321 TRP N N N N 322 TRP CA C N S 323 TRP C C N N 324 TRP O O N N 325 TRP CB C N N 326 TRP CG C Y N 327 TRP CD1 C Y N 328 TRP CD2 C Y N 329 TRP NE1 N Y N 330 TRP CE2 C Y N 331 TRP CE3 C Y N 332 TRP CZ2 C Y N 333 TRP CZ3 C Y N 334 TRP CH2 C Y N 335 TRP OXT O N N 336 TRP H H N N 337 TRP H2 H N N 338 TRP HA H N N 339 TRP HB2 H N N 340 TRP HB3 H N N 341 TRP HD1 H N N 342 TRP HE1 H N N 343 TRP HE3 H N N 344 TRP HZ2 H N N 345 TRP HZ3 H N N 346 TRP HH2 H N N 347 TRP HXT H N N 348 TYR N N N N 349 TYR CA C N S 350 TYR C C N N 351 TYR O O N N 352 TYR CB C N N 353 TYR CG C Y N 354 TYR CD1 C Y N 355 TYR CD2 C Y N 356 TYR CE1 C Y N 357 TYR CE2 C Y N 358 TYR CZ C Y N 359 TYR OH O N N 360 TYR OXT O N N 361 TYR H H N N 362 TYR H2 H N N 363 TYR HA H N N 364 TYR HB2 H N N 365 TYR HB3 H N N 366 TYR HD1 H N N 367 TYR HD2 H N N 368 TYR HE1 H N N 369 TYR HE2 H N N 370 TYR HH H N N 371 TYR HXT H N N 372 VAL N N N N 373 VAL CA C N S 374 VAL C C N N 375 VAL O O N N 376 VAL CB C N N 377 VAL CG1 C N N 378 VAL CG2 C N N 379 VAL OXT O N N 380 VAL H H N N 381 VAL H2 H N N 382 VAL HA H N N 383 VAL HB H N N 384 VAL HG11 H N N 385 VAL HG12 H N N 386 VAL HG13 H N N 387 VAL HG21 H N N 388 VAL HG22 H N N 389 VAL HG23 H N N 390 VAL HXT H N N 391 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CHLORIDE ION' CL 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1GCQ _pdbx_initial_refinement_model.details 'PDB entry 1GCQ, chain A, Non-conserved residue pruned to CB atom using CHAINSAW' #