data_3IRR # _entry.id 3IRR # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.378 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3IRR pdb_00003irr 10.2210/pdb3irr/pdb NDB NA0129 ? ? RCSB RCSB054783 ? ? WWPDB D_1000054783 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1QBJ Zalpha/Z-DNA unspecified PDB 3IRQ 'Zalpha/Z-Z junction' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3IRR _pdbx_database_status.recvd_initial_deposition_date 2009-08-24 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Athanasiadis, A.' 1 'de Rosa, M.' 2 # _citation.id primary _citation.title 'Crystal structure of a junction between two Z-DNA helices.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 107 _citation.page_first 9088 _citation.page_last 9092 _citation.year 2010 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20439751 _citation.pdbx_database_id_DOI 10.1073/pnas.1003182107 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'de Rosa, M.' 1 ? primary 'de Sanctis, D.' 2 ? primary 'Rosario, A.L.' 3 ? primary 'Archer, M.' 4 ? primary 'Rich, A.' 5 ? primary 'Athanasiadis, A.' 6 ? primary 'Carrondo, M.A.' 7 ? # _cell.entry_id 3IRR _cell.length_a 30.667 _cell.length_b 102.205 _cell.length_c 105.883 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3IRR _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Double-stranded RNA-specific adenosine deaminase' 7372.584 4 3.5.4.- ? 'Zalpha domain' ? 2 polymer syn ;DNA (5'-D(*G*TP*CP*GP*CP*GP*CP*GP*TP*CP*GP*CP*GP*CP*G)-3') ; 4602.959 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*A*CP*CP*GP*CP*GP*CP*GP*AP*CP*GP*CP*GP*CP*G)-3') ; 4580.963 1 ? ? ? ? 4 non-polymer syn '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' 238.305 1 ? ? ? ? 5 water nat water 18.015 32 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'DRADA, 136 kDa double-stranded RNA-binding protein, P136, K88DSRBP, Interferon-inducible protein 4, IFI-4' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no GSHMEQRILKFLEELGEGKATTAHDLSGKLGTPKKEINRVLYSLAKKGKLQKEAGTPPLWKIAVSTQ GSHMEQRILKFLEELGEGKATTAHDLSGKLGTPKKEINRVLYSLAKKGKLQKEAGTPPLWKIAVSTQ A,B,C,D ? 2 polydeoxyribonucleotide no no '(DG)(DT)(DC)(DG)(DC)(DG)(DC)(DG)(DT)(DC)(DG)(DC)(DG)(DC)(DG)' GTCGCGCGTCGCGCG F ? 3 polydeoxyribonucleotide no no '(DA)(DC)(DC)(DG)(DC)(DG)(DC)(DG)(DA)(DC)(DG)(DC)(DG)(DC)(DG)' ACCGCGCGACGCGCG G ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 GLU n 1 6 GLN n 1 7 ARG n 1 8 ILE n 1 9 LEU n 1 10 LYS n 1 11 PHE n 1 12 LEU n 1 13 GLU n 1 14 GLU n 1 15 LEU n 1 16 GLY n 1 17 GLU n 1 18 GLY n 1 19 LYS n 1 20 ALA n 1 21 THR n 1 22 THR n 1 23 ALA n 1 24 HIS n 1 25 ASP n 1 26 LEU n 1 27 SER n 1 28 GLY n 1 29 LYS n 1 30 LEU n 1 31 GLY n 1 32 THR n 1 33 PRO n 1 34 LYS n 1 35 LYS n 1 36 GLU n 1 37 ILE n 1 38 ASN n 1 39 ARG n 1 40 VAL n 1 41 LEU n 1 42 TYR n 1 43 SER n 1 44 LEU n 1 45 ALA n 1 46 LYS n 1 47 LYS n 1 48 GLY n 1 49 LYS n 1 50 LEU n 1 51 GLN n 1 52 LYS n 1 53 GLU n 1 54 ALA n 1 55 GLY n 1 56 THR n 1 57 PRO n 1 58 PRO n 1 59 LEU n 1 60 TRP n 1 61 LYS n 1 62 ILE n 1 63 ALA n 1 64 VAL n 1 65 SER n 1 66 THR n 1 67 GLN n 2 1 DG n 2 2 DT n 2 3 DC n 2 4 DG n 2 5 DC n 2 6 DG n 2 7 DC n 2 8 DG n 2 9 DT n 2 10 DC n 2 11 DG n 2 12 DC n 2 13 DG n 2 14 DC n 2 15 DG n 3 1 DA n 3 2 DC n 3 3 DC n 3 4 DG n 3 5 DC n 3 6 DG n 3 7 DC n 3 8 DG n 3 9 DA n 3 10 DC n 3 11 DG n 3 12 DC n 3 13 DG n 3 14 DC n 3 15 DG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'ADAR, ADAR1, DSRAD, G1P1, IFI4' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type vector _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP DSRAD_HUMAN P55265 1 EQRILKFLEELGEGKATTAHDLSGKLGTPKKEINRVLYSLAKKGKLQKEAGTPPLWKIAVSTQ 140 ? 2 PDB 3IRR 3IRR 2 GTCGCGCGTCGCGCG 1 ? 3 PDB 3IRR 3IRR 3 ACCGCGCGACGCGCG 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3IRR A 5 ? 67 ? P55265 140 ? 202 ? 140 202 2 1 3IRR B 5 ? 67 ? P55265 140 ? 202 ? 140 202 3 1 3IRR C 5 ? 67 ? P55265 140 ? 202 ? 140 202 4 1 3IRR D 5 ? 67 ? P55265 140 ? 202 ? 140 202 5 2 3IRR F 2 ? 15 ? 3IRR 0 ? 13 ? 0 13 6 3 3IRR G 2 ? 15 ? 3IRR 0 ? 13 ? 0 13 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3IRR GLY A 1 ? UNP P55265 ? ? 'expression tag' 136 1 1 3IRR SER A 2 ? UNP P55265 ? ? 'expression tag' 137 2 1 3IRR HIS A 3 ? UNP P55265 ? ? 'expression tag' 138 3 1 3IRR MET A 4 ? UNP P55265 ? ? 'expression tag' 139 4 2 3IRR GLY B 1 ? UNP P55265 ? ? 'expression tag' 136 5 2 3IRR SER B 2 ? UNP P55265 ? ? 'expression tag' 137 6 2 3IRR HIS B 3 ? UNP P55265 ? ? 'expression tag' 138 7 2 3IRR MET B 4 ? UNP P55265 ? ? 'expression tag' 139 8 3 3IRR GLY C 1 ? UNP P55265 ? ? 'expression tag' 136 9 3 3IRR SER C 2 ? UNP P55265 ? ? 'expression tag' 137 10 3 3IRR HIS C 3 ? UNP P55265 ? ? 'expression tag' 138 11 3 3IRR MET C 4 ? UNP P55265 ? ? 'expression tag' 139 12 4 3IRR GLY D 1 ? UNP P55265 ? ? 'expression tag' 136 13 4 3IRR SER D 2 ? UNP P55265 ? ? 'expression tag' 137 14 4 3IRR HIS D 3 ? UNP P55265 ? ? 'expression tag' 138 15 4 3IRR MET D 4 ? UNP P55265 ? ? 'expression tag' 139 16 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 EPE non-polymer . '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' HEPES 'C8 H18 N2 O4 S' 238.305 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3IRR _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.18 _exptl_crystal.density_percent_sol 43.57 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details '16% PEG 2000 MME, 0.1 M HEPES, 0.2 M ammonium acetate, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 110.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2008-06-27 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.87 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID29' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID29 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.87 # _reflns.entry_id 3IRR _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 47.04 _reflns.d_resolution_high 2.65 _reflns.number_obs 10230 _reflns.number_all 10248 _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.092 _reflns.pdbx_Rsym_value 0.049 _reflns.pdbx_netI_over_sigmaI 12.2 _reflns.B_iso_Wilson_estimate 64.54 _reflns.pdbx_redundancy 4.1 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.65 _reflns_shell.d_res_low 2.79 _reflns_shell.percent_possible_all 99.9 _reflns_shell.Rmerge_I_obs 0.534 _reflns_shell.pdbx_Rsym_value 0.294 _reflns_shell.meanI_over_sigI_obs 2.8 _reflns_shell.pdbx_redundancy 4.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1488 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3IRR _refine.ls_number_reflns_obs 10166 _refine.ls_number_reflns_all 10166 _refine.pdbx_ls_sigma_I 0.0 _refine.pdbx_ls_sigma_F 1.36 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 46.023 _refine.ls_d_res_high 2.650 _refine.ls_percent_reflns_obs 98.95 _refine.ls_R_factor_obs 0.2294 _refine.ls_R_factor_all 0.2320 _refine.ls_R_factor_R_work 0.2294 _refine.ls_R_factor_R_free 0.2831 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.83 _refine.ls_number_reflns_R_free 491 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.324 _refine.solvent_model_param_bsol 29.410 _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'PDB entry 1QBJ' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.39 _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1931 _refine_hist.pdbx_number_atoms_nucleic_acid 545 _refine_hist.pdbx_number_atoms_ligand 15 _refine_hist.number_atoms_solvent 32 _refine_hist.number_atoms_total 2523 _refine_hist.d_res_high 2.650 _refine_hist.d_res_low 46.023 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.002 ? ? 2597 'X-RAY DIFFRACTION' ? f_angle_d 0.511 ? ? 3597 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 18.591 ? ? 1037 'X-RAY DIFFRACTION' ? f_chiral_restr 0.027 ? ? 401 'X-RAY DIFFRACTION' ? f_plane_restr 0.003 ? ? 353 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 2.6501 2.9167 2366 0.2983 100.00 0.3895 . . 118 . . . . 'X-RAY DIFFRACTION' . 2.9167 3.3387 2393 0.2537 99.00 0.3351 . . 133 . . . . 'X-RAY DIFFRACTION' . 3.3387 4.2059 2408 0.1968 99.00 0.2718 . . 120 . . . . 'X-RAY DIFFRACTION' . 4.2059 46.0296 2508 0.2034 97.00 0.2272 . . 120 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 3IRR _struct.title 'Crystal Structure of a Z-Z junction (with HEPES intercalating)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3IRR _struct_keywords.pdbx_keywords HYDROLASE/DNA _struct_keywords.text ;Z-DNA, ADAR1, RNA EDITING, INNATE IMMUNITY, DNA JUNCTION, Z DOMAIN, INTERCALATION, Alternative promoter usage, Alternative splicing, Cytoplasm, Disease mutation, DNA-binding, Hydrolase, Isopeptide bond, Metal-binding, mRNA processing, Nucleus, Phosphoprotein, Polymorphism, RNA-binding, RNA-mediated gene silencing, Ubl conjugation, Zinc, HYDROLASE-DNA COMPLEX ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 2 ? E N N 3 ? F N N 1 ? G N N 4 ? H N N 5 ? I N N 5 ? J N N 5 ? K N N 5 ? L N N 5 ? M N N 5 ? # _struct_biol.id 1 _struct_biol.details 'Biological assembly is a double stranded DNA molecule bound by four protein molecules' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 HIS A 3 ? GLY A 16 ? HIS A 138 GLY A 151 1 ? 14 HELX_P HELX_P2 2 THR A 22 ? LEU A 30 ? THR A 157 LEU A 165 1 ? 9 HELX_P HELX_P3 3 PRO A 33 ? LYS A 46 ? PRO A 168 LYS A 181 1 ? 14 HELX_P HELX_P4 4 SER B 2 ? LEU B 15 ? SER B 137 LEU B 150 1 ? 14 HELX_P HELX_P5 5 THR B 22 ? GLY B 31 ? THR B 157 GLY B 166 1 ? 10 HELX_P HELX_P6 6 PRO B 33 ? LYS B 47 ? PRO B 168 LYS B 182 1 ? 15 HELX_P HELX_P7 7 SER C 2 ? LEU C 15 ? SER C 137 LEU C 150 1 ? 14 HELX_P HELX_P8 8 THR C 22 ? GLY C 31 ? THR C 157 GLY C 166 1 ? 10 HELX_P HELX_P9 9 PRO C 33 ? LYS C 47 ? PRO C 168 LYS C 182 1 ? 15 HELX_P HELX_P10 10 GLY F 1 ? LEU F 15 ? GLY D 136 LEU D 150 1 ? 15 HELX_P HELX_P11 11 THR F 22 ? LYS F 29 ? THR D 157 LYS D 164 1 ? 8 HELX_P HELX_P12 12 PRO F 33 ? LYS F 47 ? PRO D 168 LYS D 182 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? D DC 3 N3 ? ? ? 1_555 E DG 15 N1 ? ? F DC 1 G DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? D DC 3 N4 ? ? ? 1_555 E DG 15 O6 ? ? F DC 1 G DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? D DC 3 O2 ? ? ? 1_555 E DG 15 N2 ? ? F DC 1 G DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? D DG 4 N1 ? ? ? 1_555 E DC 14 N3 ? ? F DG 2 G DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? D DG 4 N2 ? ? ? 1_555 E DC 14 O2 ? ? F DG 2 G DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? D DG 4 O6 ? ? ? 1_555 E DC 14 N4 ? ? F DG 2 G DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? D DC 5 N3 ? ? ? 1_555 E DG 13 N1 ? ? F DC 3 G DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? D DC 5 N4 ? ? ? 1_555 E DG 13 O6 ? ? F DC 3 G DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? D DC 5 O2 ? ? ? 1_555 E DG 13 N2 ? ? F DC 3 G DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? D DG 6 N1 ? ? ? 1_555 E DC 12 N3 ? ? F DG 4 G DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? D DG 6 N2 ? ? ? 1_555 E DC 12 O2 ? ? F DG 4 G DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? D DG 6 O6 ? ? ? 1_555 E DC 12 N4 ? ? F DG 4 G DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? D DC 7 N3 ? ? ? 1_555 E DG 11 N1 ? ? F DC 5 G DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? D DC 7 N4 ? ? ? 1_555 E DG 11 O6 ? ? F DC 5 G DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? D DC 7 O2 ? ? ? 1_555 E DG 11 N2 ? ? F DC 5 G DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? D DG 8 N1 ? ? ? 1_555 E DC 10 N3 ? ? F DG 6 G DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? D DG 8 N2 ? ? ? 1_555 E DC 10 O2 ? ? F DG 6 G DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? D DG 8 O6 ? ? ? 1_555 E DC 10 N4 ? ? F DG 6 G DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? D DT 9 N3 ? ? ? 1_555 E DA 9 N1 ? ? F DT 7 G DA 7 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? hydrog20 hydrog ? ? D DC 10 N3 ? ? ? 1_555 E DG 8 N1 ? ? F DC 8 G DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? D DC 10 N4 ? ? ? 1_555 E DG 8 O6 ? ? F DC 8 G DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? D DC 10 O2 ? ? ? 1_555 E DG 8 N2 ? ? F DC 8 G DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? D DG 11 N1 ? ? ? 1_555 E DC 7 N3 ? ? F DG 9 G DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? D DG 11 N2 ? ? ? 1_555 E DC 7 O2 ? ? F DG 9 G DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? D DG 11 O6 ? ? ? 1_555 E DC 7 N4 ? ? F DG 9 G DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? D DC 12 N3 ? ? ? 1_555 E DG 6 N1 ? ? F DC 10 G DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? D DC 12 N4 ? ? ? 1_555 E DG 6 O6 ? ? F DC 10 G DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? D DC 12 O2 ? ? ? 1_555 E DG 6 N2 ? ? F DC 10 G DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? D DG 13 N2 ? ? ? 1_555 E DC 5 O2 ? ? F DG 11 G DC 3 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog30 hydrog ? ? D DC 14 N3 ? ? ? 1_555 E DG 4 N1 ? ? F DC 12 G DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? D DC 14 N4 ? ? ? 1_555 E DG 4 O6 ? ? F DC 12 G DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? D DC 14 O2 ? ? ? 1_555 E DG 4 N2 ? ? F DC 12 G DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? D DG 15 N1 ? ? ? 1_555 E DC 3 N3 ? ? F DG 13 G DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? D DG 15 N2 ? ? ? 1_555 E DC 3 O2 ? ? F DG 13 G DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? D DG 15 O6 ? ? ? 1_555 E DC 3 N4 ? ? F DG 13 G DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 2 A . ? SER 137 A HIS 3 A ? HIS 138 A 1 -1.73 2 THR 56 A . ? THR 191 A PRO 57 A ? PRO 192 A 1 -1.80 3 THR 56 B . ? THR 191 B PRO 57 B ? PRO 192 B 1 -1.58 4 THR 56 C . ? THR 191 C PRO 57 C ? PRO 192 C 1 -0.72 5 THR 56 F . ? THR 191 D PRO 57 F ? PRO 192 D 1 -3.22 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? C ? 2 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 51 ? GLU A 53 ? GLN A 186 GLU A 188 A 2 LEU A 59 ? LYS A 61 ? LEU A 194 LYS A 196 B 1 LEU B 50 ? GLU B 53 ? LEU B 185 GLU B 188 B 2 LEU B 59 ? ILE B 62 ? LEU B 194 ILE B 197 C 1 LEU C 50 ? GLU C 53 ? LEU C 185 GLU C 188 C 2 LEU C 59 ? ILE C 62 ? LEU C 194 ILE C 197 D 1 LEU F 50 ? GLU F 53 ? LEU D 185 GLU D 188 D 2 LEU F 59 ? ILE F 62 ? LEU D 194 ILE D 197 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLU A 53 ? N GLU A 188 O LEU A 59 ? O LEU A 194 B 1 2 N GLU B 53 ? N GLU B 188 O LEU B 59 ? O LEU B 194 C 1 2 N GLU C 53 ? N GLU C 188 O LEU C 59 ? O LEU C 194 D 1 2 N GLU F 53 ? N GLU D 188 O LEU F 59 ? O LEU D 194 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software F EPE 14 ? 5 'BINDING SITE FOR RESIDUE EPE F 14' 1 ? ? ? ? ? ? ? # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 DG D 8 ? DG F 6 . ? 1_555 ? 2 AC1 5 DT D 9 ? DT F 7 . ? 1_555 ? 3 AC1 5 DC D 10 ? DC F 8 . ? 1_555 ? 4 AC1 5 DG E 8 ? DG G 6 . ? 1_555 ? 5 AC1 5 DA E 9 ? DA G 7 . ? 1_555 ? # _database_PDB_matrix.entry_id 3IRR _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3IRR _atom_sites.fract_transf_matrix[1][1] 0.032608 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009784 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009444 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 136 136 GLY GLY A . n A 1 2 SER 2 137 137 SER SER A . n A 1 3 HIS 3 138 138 HIS HIS A . n A 1 4 MET 4 139 139 MET MET A . n A 1 5 GLU 5 140 140 GLU GLU A . n A 1 6 GLN 6 141 141 GLN GLN A . n A 1 7 ARG 7 142 142 ARG ARG A . n A 1 8 ILE 8 143 143 ILE ILE A . n A 1 9 LEU 9 144 144 LEU LEU A . n A 1 10 LYS 10 145 145 LYS LYS A . n A 1 11 PHE 11 146 146 PHE PHE A . n A 1 12 LEU 12 147 147 LEU LEU A . n A 1 13 GLU 13 148 148 GLU GLU A . n A 1 14 GLU 14 149 149 GLU GLU A . n A 1 15 LEU 15 150 150 LEU LEU A . n A 1 16 GLY 16 151 151 GLY GLY A . n A 1 17 GLU 17 152 152 GLU GLU A . n A 1 18 GLY 18 153 153 GLY GLY A . n A 1 19 LYS 19 154 154 LYS LYS A . n A 1 20 ALA 20 155 155 ALA ALA A . n A 1 21 THR 21 156 156 THR THR A . n A 1 22 THR 22 157 157 THR THR A . n A 1 23 ALA 23 158 158 ALA ALA A . n A 1 24 HIS 24 159 159 HIS HIS A . n A 1 25 ASP 25 160 160 ASP ASP A . n A 1 26 LEU 26 161 161 LEU LEU A . n A 1 27 SER 27 162 162 SER SER A . n A 1 28 GLY 28 163 163 GLY GLY A . n A 1 29 LYS 29 164 164 LYS LYS A . n A 1 30 LEU 30 165 165 LEU LEU A . n A 1 31 GLY 31 166 166 GLY GLY A . n A 1 32 THR 32 167 167 THR THR A . n A 1 33 PRO 33 168 168 PRO PRO A . n A 1 34 LYS 34 169 169 LYS LYS A . n A 1 35 LYS 35 170 170 LYS LYS A . n A 1 36 GLU 36 171 171 GLU GLU A . n A 1 37 ILE 37 172 172 ILE ILE A . n A 1 38 ASN 38 173 173 ASN ASN A . n A 1 39 ARG 39 174 174 ARG ARG A . n A 1 40 VAL 40 175 175 VAL VAL A . n A 1 41 LEU 41 176 176 LEU LEU A . n A 1 42 TYR 42 177 177 TYR TYR A . n A 1 43 SER 43 178 178 SER SER A . n A 1 44 LEU 44 179 179 LEU LEU A . n A 1 45 ALA 45 180 180 ALA ALA A . n A 1 46 LYS 46 181 181 LYS LYS A . n A 1 47 LYS 47 182 182 LYS LYS A . n A 1 48 GLY 48 183 183 GLY GLY A . n A 1 49 LYS 49 184 184 LYS LYS A . n A 1 50 LEU 50 185 185 LEU LEU A . n A 1 51 GLN 51 186 186 GLN GLN A . n A 1 52 LYS 52 187 187 LYS LYS A . n A 1 53 GLU 53 188 188 GLU GLU A . n A 1 54 ALA 54 189 189 ALA ALA A . n A 1 55 GLY 55 190 190 GLY GLY A . n A 1 56 THR 56 191 191 THR THR A . n A 1 57 PRO 57 192 192 PRO PRO A . n A 1 58 PRO 58 193 193 PRO PRO A . n A 1 59 LEU 59 194 194 LEU LEU A . n A 1 60 TRP 60 195 195 TRP TRP A . n A 1 61 LYS 61 196 196 LYS LYS A . n A 1 62 ILE 62 197 197 ILE ILE A . n A 1 63 ALA 63 198 198 ALA ALA A . n A 1 64 VAL 64 199 ? ? ? A . n A 1 65 SER 65 200 ? ? ? A . n A 1 66 THR 66 201 ? ? ? A . n A 1 67 GLN 67 202 ? ? ? A . n B 1 1 GLY 1 136 ? ? ? B . n B 1 2 SER 2 137 137 SER SER B . n B 1 3 HIS 3 138 138 HIS HIS B . n B 1 4 MET 4 139 139 MET MET B . n B 1 5 GLU 5 140 140 GLU GLU B . n B 1 6 GLN 6 141 141 GLN GLN B . n B 1 7 ARG 7 142 142 ARG ARG B . n B 1 8 ILE 8 143 143 ILE ILE B . n B 1 9 LEU 9 144 144 LEU LEU B . n B 1 10 LYS 10 145 145 LYS LYS B . n B 1 11 PHE 11 146 146 PHE PHE B . n B 1 12 LEU 12 147 147 LEU LEU B . n B 1 13 GLU 13 148 148 GLU GLU B . n B 1 14 GLU 14 149 149 GLU GLU B . n B 1 15 LEU 15 150 150 LEU LEU B . n B 1 16 GLY 16 151 151 GLY GLY B . n B 1 17 GLU 17 152 152 GLU GLU B . n B 1 18 GLY 18 153 153 GLY GLY B . n B 1 19 LYS 19 154 154 LYS LYS B . n B 1 20 ALA 20 155 155 ALA ALA B . n B 1 21 THR 21 156 156 THR THR B . n B 1 22 THR 22 157 157 THR THR B . n B 1 23 ALA 23 158 158 ALA ALA B . n B 1 24 HIS 24 159 159 HIS HIS B . n B 1 25 ASP 25 160 160 ASP ASP B . n B 1 26 LEU 26 161 161 LEU LEU B . n B 1 27 SER 27 162 162 SER SER B . n B 1 28 GLY 28 163 163 GLY GLY B . n B 1 29 LYS 29 164 164 LYS LYS B . n B 1 30 LEU 30 165 165 LEU LEU B . n B 1 31 GLY 31 166 166 GLY GLY B . n B 1 32 THR 32 167 167 THR THR B . n B 1 33 PRO 33 168 168 PRO PRO B . n B 1 34 LYS 34 169 169 LYS LYS B . n B 1 35 LYS 35 170 170 LYS LYS B . n B 1 36 GLU 36 171 171 GLU GLU B . n B 1 37 ILE 37 172 172 ILE ILE B . n B 1 38 ASN 38 173 173 ASN ASN B . n B 1 39 ARG 39 174 174 ARG ARG B . n B 1 40 VAL 40 175 175 VAL VAL B . n B 1 41 LEU 41 176 176 LEU LEU B . n B 1 42 TYR 42 177 177 TYR TYR B . n B 1 43 SER 43 178 178 SER SER B . n B 1 44 LEU 44 179 179 LEU LEU B . n B 1 45 ALA 45 180 180 ALA ALA B . n B 1 46 LYS 46 181 181 LYS LYS B . n B 1 47 LYS 47 182 182 LYS LYS B . n B 1 48 GLY 48 183 183 GLY GLY B . n B 1 49 LYS 49 184 184 LYS LYS B . n B 1 50 LEU 50 185 185 LEU LEU B . n B 1 51 GLN 51 186 186 GLN GLN B . n B 1 52 LYS 52 187 187 LYS LYS B . n B 1 53 GLU 53 188 188 GLU GLU B . n B 1 54 ALA 54 189 189 ALA ALA B . n B 1 55 GLY 55 190 190 GLY GLY B . n B 1 56 THR 56 191 191 THR THR B . n B 1 57 PRO 57 192 192 PRO PRO B . n B 1 58 PRO 58 193 193 PRO PRO B . n B 1 59 LEU 59 194 194 LEU LEU B . n B 1 60 TRP 60 195 195 TRP TRP B . n B 1 61 LYS 61 196 196 LYS LYS B . n B 1 62 ILE 62 197 197 ILE ILE B . n B 1 63 ALA 63 198 198 ALA ALA B . n B 1 64 VAL 64 199 ? ? ? B . n B 1 65 SER 65 200 ? ? ? B . n B 1 66 THR 66 201 ? ? ? B . n B 1 67 GLN 67 202 ? ? ? B . n C 1 1 GLY 1 136 ? ? ? C . n C 1 2 SER 2 137 137 SER SER C . n C 1 3 HIS 3 138 138 HIS HIS C . n C 1 4 MET 4 139 139 MET MET C . n C 1 5 GLU 5 140 140 GLU GLU C . n C 1 6 GLN 6 141 141 GLN GLN C . n C 1 7 ARG 7 142 142 ARG ARG C . n C 1 8 ILE 8 143 143 ILE ILE C . n C 1 9 LEU 9 144 144 LEU LEU C . n C 1 10 LYS 10 145 145 LYS LYS C . n C 1 11 PHE 11 146 146 PHE PHE C . n C 1 12 LEU 12 147 147 LEU LEU C . n C 1 13 GLU 13 148 148 GLU GLU C . n C 1 14 GLU 14 149 149 GLU GLU C . n C 1 15 LEU 15 150 150 LEU LEU C . n C 1 16 GLY 16 151 151 GLY GLY C . n C 1 17 GLU 17 152 152 GLU GLU C . n C 1 18 GLY 18 153 153 GLY GLY C . n C 1 19 LYS 19 154 154 LYS LYS C . n C 1 20 ALA 20 155 155 ALA ALA C . n C 1 21 THR 21 156 156 THR THR C . n C 1 22 THR 22 157 157 THR THR C . n C 1 23 ALA 23 158 158 ALA ALA C . n C 1 24 HIS 24 159 159 HIS HIS C . n C 1 25 ASP 25 160 160 ASP ASP C . n C 1 26 LEU 26 161 161 LEU LEU C . n C 1 27 SER 27 162 162 SER SER C . n C 1 28 GLY 28 163 163 GLY GLY C . n C 1 29 LYS 29 164 164 LYS LYS C . n C 1 30 LEU 30 165 165 LEU LEU C . n C 1 31 GLY 31 166 166 GLY GLY C . n C 1 32 THR 32 167 167 THR THR C . n C 1 33 PRO 33 168 168 PRO PRO C . n C 1 34 LYS 34 169 169 LYS LYS C . n C 1 35 LYS 35 170 170 LYS LYS C . n C 1 36 GLU 36 171 171 GLU GLU C . n C 1 37 ILE 37 172 172 ILE ILE C . n C 1 38 ASN 38 173 173 ASN ASN C . n C 1 39 ARG 39 174 174 ARG ARG C . n C 1 40 VAL 40 175 175 VAL VAL C . n C 1 41 LEU 41 176 176 LEU LEU C . n C 1 42 TYR 42 177 177 TYR TYR C . n C 1 43 SER 43 178 178 SER SER C . n C 1 44 LEU 44 179 179 LEU LEU C . n C 1 45 ALA 45 180 180 ALA ALA C . n C 1 46 LYS 46 181 181 LYS LYS C . n C 1 47 LYS 47 182 182 LYS LYS C . n C 1 48 GLY 48 183 183 GLY GLY C . n C 1 49 LYS 49 184 184 LYS LYS C . n C 1 50 LEU 50 185 185 LEU LEU C . n C 1 51 GLN 51 186 186 GLN GLN C . n C 1 52 LYS 52 187 187 LYS LYS C . n C 1 53 GLU 53 188 188 GLU GLU C . n C 1 54 ALA 54 189 189 ALA ALA C . n C 1 55 GLY 55 190 190 GLY GLY C . n C 1 56 THR 56 191 191 THR THR C . n C 1 57 PRO 57 192 192 PRO PRO C . n C 1 58 PRO 58 193 193 PRO PRO C . n C 1 59 LEU 59 194 194 LEU LEU C . n C 1 60 TRP 60 195 195 TRP TRP C . n C 1 61 LYS 61 196 196 LYS LYS C . n C 1 62 ILE 62 197 197 ILE ILE C . n C 1 63 ALA 63 198 198 ALA ALA C . n C 1 64 VAL 64 199 ? ? ? C . n C 1 65 SER 65 200 ? ? ? C . n C 1 66 THR 66 201 ? ? ? C . n C 1 67 GLN 67 202 ? ? ? C . n D 2 1 DG 1 -1 ? ? ? F . n D 2 2 DT 2 0 0 DT DT F . n D 2 3 DC 3 1 1 DC DC F . n D 2 4 DG 4 2 2 DG DG F . n D 2 5 DC 5 3 3 DC DC F . n D 2 6 DG 6 4 4 DG DG F . n D 2 7 DC 7 5 5 DC DC F . n D 2 8 DG 8 6 6 DG DG F . n D 2 9 DT 9 7 7 DT DT F . n D 2 10 DC 10 8 8 DC DC F . n D 2 11 DG 11 9 9 DG DG F . n D 2 12 DC 12 10 10 DC DC F . n D 2 13 DG 13 11 11 DG DG F . n D 2 14 DC 14 12 12 DC DC F . n D 2 15 DG 15 13 13 DG DG F . n E 3 1 DA 1 -1 ? ? ? G . n E 3 2 DC 2 0 0 DC DC G . n E 3 3 DC 3 1 1 DC DC G . n E 3 4 DG 4 2 2 DG DG G . n E 3 5 DC 5 3 3 DC DC G . n E 3 6 DG 6 4 4 DG DG G . n E 3 7 DC 7 5 5 DC DC G . n E 3 8 DG 8 6 6 DG DG G . n E 3 9 DA 9 7 7 DA DA G . n E 3 10 DC 10 8 8 DC DC G . n E 3 11 DG 11 9 9 DG DG G . n E 3 12 DC 12 10 10 DC DC G . n E 3 13 DG 13 11 11 DG DG G . n E 3 14 DC 14 12 12 DC DC G . n E 3 15 DG 15 13 13 DG DG G . n F 1 1 GLY 1 136 136 GLY GLY D . n F 1 2 SER 2 137 137 SER SER D . n F 1 3 HIS 3 138 138 HIS HIS D . n F 1 4 MET 4 139 139 MET MET D . n F 1 5 GLU 5 140 140 GLU GLU D . n F 1 6 GLN 6 141 141 GLN GLN D . n F 1 7 ARG 7 142 142 ARG ARG D . n F 1 8 ILE 8 143 143 ILE ILE D . n F 1 9 LEU 9 144 144 LEU LEU D . n F 1 10 LYS 10 145 145 LYS LYS D . n F 1 11 PHE 11 146 146 PHE PHE D . n F 1 12 LEU 12 147 147 LEU LEU D . n F 1 13 GLU 13 148 148 GLU GLU D . n F 1 14 GLU 14 149 149 GLU GLU D . n F 1 15 LEU 15 150 150 LEU LEU D . n F 1 16 GLY 16 151 151 GLY GLY D . n F 1 17 GLU 17 152 152 GLU GLU D . n F 1 18 GLY 18 153 153 GLY GLY D . n F 1 19 LYS 19 154 154 LYS LYS D . n F 1 20 ALA 20 155 155 ALA ALA D . n F 1 21 THR 21 156 156 THR THR D . n F 1 22 THR 22 157 157 THR THR D . n F 1 23 ALA 23 158 158 ALA ALA D . n F 1 24 HIS 24 159 159 HIS HIS D . n F 1 25 ASP 25 160 160 ASP ASP D . n F 1 26 LEU 26 161 161 LEU LEU D . n F 1 27 SER 27 162 162 SER SER D . n F 1 28 GLY 28 163 163 GLY GLY D . n F 1 29 LYS 29 164 164 LYS LYS D . n F 1 30 LEU 30 165 165 LEU LEU D . n F 1 31 GLY 31 166 166 GLY GLY D . n F 1 32 THR 32 167 167 THR THR D . n F 1 33 PRO 33 168 168 PRO PRO D . n F 1 34 LYS 34 169 169 LYS LYS D . n F 1 35 LYS 35 170 170 LYS LYS D . n F 1 36 GLU 36 171 171 GLU GLU D . n F 1 37 ILE 37 172 172 ILE ILE D . n F 1 38 ASN 38 173 173 ASN ASN D . n F 1 39 ARG 39 174 174 ARG ARG D . n F 1 40 VAL 40 175 175 VAL VAL D . n F 1 41 LEU 41 176 176 LEU LEU D . n F 1 42 TYR 42 177 177 TYR TYR D . n F 1 43 SER 43 178 178 SER SER D . n F 1 44 LEU 44 179 179 LEU LEU D . n F 1 45 ALA 45 180 180 ALA ALA D . n F 1 46 LYS 46 181 181 LYS LYS D . n F 1 47 LYS 47 182 182 LYS LYS D . n F 1 48 GLY 48 183 183 GLY GLY D . n F 1 49 LYS 49 184 184 LYS LYS D . n F 1 50 LEU 50 185 185 LEU LEU D . n F 1 51 GLN 51 186 186 GLN GLN D . n F 1 52 LYS 52 187 187 LYS LYS D . n F 1 53 GLU 53 188 188 GLU GLU D . n F 1 54 ALA 54 189 189 ALA ALA D . n F 1 55 GLY 55 190 190 GLY GLY D . n F 1 56 THR 56 191 191 THR THR D . n F 1 57 PRO 57 192 192 PRO PRO D . n F 1 58 PRO 58 193 193 PRO PRO D . n F 1 59 LEU 59 194 194 LEU LEU D . n F 1 60 TRP 60 195 195 TRP TRP D . n F 1 61 LYS 61 196 196 LYS LYS D . n F 1 62 ILE 62 197 197 ILE ILE D . n F 1 63 ALA 63 198 198 ALA ALA D . n F 1 64 VAL 64 199 199 VAL VAL D . n F 1 65 SER 65 200 ? ? ? D . n F 1 66 THR 66 201 ? ? ? D . n F 1 67 GLN 67 202 ? ? ? D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 EPE 1 14 14 EPE EPE F . H 5 HOH 1 1 1 HOH HOH A . H 5 HOH 2 8 8 HOH HOH A . H 5 HOH 3 9 9 HOH HOH A . H 5 HOH 4 11 11 HOH HOH A . H 5 HOH 5 12 12 HOH HOH A . H 5 HOH 6 28 28 HOH HOH A . H 5 HOH 7 30 30 HOH HOH A . I 5 HOH 1 2 2 HOH HOH B . I 5 HOH 2 18 18 HOH HOH B . I 5 HOH 3 19 19 HOH HOH B . I 5 HOH 4 20 20 HOH HOH B . J 5 HOH 1 7 7 HOH HOH C . J 5 HOH 2 15 15 HOH HOH C . J 5 HOH 3 17 17 HOH HOH C . J 5 HOH 4 25 25 HOH HOH C . J 5 HOH 5 31 31 HOH HOH C . K 5 HOH 1 15 15 HOH HOH F . K 5 HOH 2 16 16 HOH HOH F . K 5 HOH 3 17 17 HOH HOH F . K 5 HOH 4 18 18 HOH HOH F . K 5 HOH 5 21 21 HOH HOH F . K 5 HOH 6 23 23 HOH HOH F . L 5 HOH 1 14 14 HOH HOH G . L 5 HOH 2 15 15 HOH HOH G . L 5 HOH 3 16 16 HOH HOH G . L 5 HOH 4 29 29 HOH HOH G . M 5 HOH 1 16 16 HOH HOH D . M 5 HOH 2 22 22 HOH HOH D . M 5 HOH 3 24 24 HOH HOH D . M 5 HOH 4 26 26 HOH HOH D . M 5 HOH 5 27 27 HOH HOH D . M 5 HOH 6 32 32 HOH HOH D . # _struct_site_keywords.site_id 1 _struct_site_keywords.text INTERCALATION # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-05-19 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_ref_seq_dif 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DNA 'data collection' . ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine)' ? 3 MOSFLM 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 "O4'" _pdbx_validate_rmsd_angle.auth_asym_id_1 F _pdbx_validate_rmsd_angle.auth_comp_id_1 DC _pdbx_validate_rmsd_angle.auth_seq_id_1 10 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 "C1'" _pdbx_validate_rmsd_angle.auth_asym_id_2 F _pdbx_validate_rmsd_angle.auth_comp_id_2 DC _pdbx_validate_rmsd_angle.auth_seq_id_2 10 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 N1 _pdbx_validate_rmsd_angle.auth_asym_id_3 F _pdbx_validate_rmsd_angle.auth_comp_id_3 DC _pdbx_validate_rmsd_angle.auth_seq_id_3 10 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 110.35 _pdbx_validate_rmsd_angle.angle_target_value 108.30 _pdbx_validate_rmsd_angle.angle_deviation 2.05 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.30 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 137 ? ? -171.75 59.55 2 1 ALA A 189 ? ? -49.81 150.57 3 1 LYS B 164 ? ? -141.61 -30.92 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 141 ? CD ? A GLN 6 CD 2 1 Y 1 A GLN 141 ? OE1 ? A GLN 6 OE1 3 1 Y 1 A GLN 141 ? NE2 ? A GLN 6 NE2 4 1 Y 1 A GLU 152 ? OE1 ? A GLU 17 OE1 5 1 Y 1 A GLU 152 ? OE2 ? A GLU 17 OE2 6 1 Y 1 A LYS 170 ? CG ? A LYS 35 CG 7 1 Y 1 A LYS 170 ? CD ? A LYS 35 CD 8 1 Y 1 A LYS 170 ? CE ? A LYS 35 CE 9 1 Y 1 A LYS 170 ? NZ ? A LYS 35 NZ 10 1 Y 1 A LYS 187 ? CE ? A LYS 52 CE 11 1 Y 1 A LYS 187 ? NZ ? A LYS 52 NZ 12 1 Y 1 B LYS 145 ? CD ? B LYS 10 CD 13 1 Y 1 B LYS 145 ? CE ? B LYS 10 CE 14 1 Y 1 B LYS 145 ? NZ ? B LYS 10 NZ 15 1 Y 1 B LYS 170 ? CD ? B LYS 35 CD 16 1 Y 1 B LYS 170 ? CE ? B LYS 35 CE 17 1 Y 1 B LYS 170 ? NZ ? B LYS 35 NZ 18 1 Y 1 C LYS 145 ? CD ? C LYS 10 CD 19 1 Y 1 C LYS 145 ? CE ? C LYS 10 CE 20 1 Y 1 C LYS 145 ? NZ ? C LYS 10 NZ 21 1 Y 1 F DT 0 ? P ? D DT 2 P 22 1 Y 1 F DT 0 ? OP1 ? D DT 2 OP1 23 1 Y 1 F DT 0 ? OP2 ? D DT 2 OP2 24 1 Y 1 F DT 0 ? "O5'" ? D DT 2 "O5'" 25 1 Y 1 F DT 0 ? "C5'" ? D DT 2 "C5'" 26 1 Y 1 F DT 0 ? N1 ? D DT 2 N1 27 1 Y 1 F DT 0 ? C2 ? D DT 2 C2 28 1 Y 1 F DT 0 ? O2 ? D DT 2 O2 29 1 Y 1 F DT 0 ? N3 ? D DT 2 N3 30 1 Y 1 F DT 0 ? C4 ? D DT 2 C4 31 1 Y 1 F DT 0 ? O4 ? D DT 2 O4 32 1 Y 1 F DT 0 ? C5 ? D DT 2 C5 33 1 Y 1 F DT 0 ? C7 ? D DT 2 C7 34 1 Y 1 F DT 0 ? C6 ? D DT 2 C6 35 1 Y 1 G DC 0 ? P ? E DC 2 P 36 1 Y 1 G DC 0 ? OP1 ? E DC 2 OP1 37 1 Y 1 G DC 0 ? OP2 ? E DC 2 OP2 38 1 Y 1 G DC 0 ? "O5'" ? E DC 2 "O5'" 39 1 Y 1 G DC 0 ? "C5'" ? E DC 2 "C5'" 40 1 Y 1 G DC 0 ? N1 ? E DC 2 N1 41 1 Y 1 G DC 0 ? C2 ? E DC 2 C2 42 1 Y 1 G DC 0 ? O2 ? E DC 2 O2 43 1 Y 1 G DC 0 ? N3 ? E DC 2 N3 44 1 Y 1 G DC 0 ? C4 ? E DC 2 C4 45 1 Y 1 G DC 0 ? N4 ? E DC 2 N4 46 1 Y 1 G DC 0 ? C5 ? E DC 2 C5 47 1 Y 1 G DC 0 ? C6 ? E DC 2 C6 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A VAL 199 ? A VAL 64 2 1 Y 1 A SER 200 ? A SER 65 3 1 Y 1 A THR 201 ? A THR 66 4 1 Y 1 A GLN 202 ? A GLN 67 5 1 Y 1 B GLY 136 ? B GLY 1 6 1 Y 1 B VAL 199 ? B VAL 64 7 1 Y 1 B SER 200 ? B SER 65 8 1 Y 1 B THR 201 ? B THR 66 9 1 Y 1 B GLN 202 ? B GLN 67 10 1 Y 1 C GLY 136 ? C GLY 1 11 1 Y 1 C VAL 199 ? C VAL 64 12 1 Y 1 C SER 200 ? C SER 65 13 1 Y 1 C THR 201 ? C THR 66 14 1 Y 1 C GLN 202 ? C GLN 67 15 1 Y 1 F DG -1 ? D DG 1 16 1 Y 1 G DA -1 ? E DA 1 17 1 Y 1 D SER 200 ? F SER 65 18 1 Y 1 D THR 201 ? F THR 66 19 1 Y 1 D GLN 202 ? F GLN 67 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 DA OP3 O N N 74 DA P P N N 75 DA OP1 O N N 76 DA OP2 O N N 77 DA "O5'" O N N 78 DA "C5'" C N N 79 DA "C4'" C N R 80 DA "O4'" O N N 81 DA "C3'" C N S 82 DA "O3'" O N N 83 DA "C2'" C N N 84 DA "C1'" C N R 85 DA N9 N Y N 86 DA C8 C Y N 87 DA N7 N Y N 88 DA C5 C Y N 89 DA C6 C Y N 90 DA N6 N N N 91 DA N1 N Y N 92 DA C2 C Y N 93 DA N3 N Y N 94 DA C4 C Y N 95 DA HOP3 H N N 96 DA HOP2 H N N 97 DA "H5'" H N N 98 DA "H5''" H N N 99 DA "H4'" H N N 100 DA "H3'" H N N 101 DA "HO3'" H N N 102 DA "H2'" H N N 103 DA "H2''" H N N 104 DA "H1'" H N N 105 DA H8 H N N 106 DA H61 H N N 107 DA H62 H N N 108 DA H2 H N N 109 DC OP3 O N N 110 DC P P N N 111 DC OP1 O N N 112 DC OP2 O N N 113 DC "O5'" O N N 114 DC "C5'" C N N 115 DC "C4'" C N R 116 DC "O4'" O N N 117 DC "C3'" C N S 118 DC "O3'" O N N 119 DC "C2'" C N N 120 DC "C1'" C N R 121 DC N1 N N N 122 DC C2 C N N 123 DC O2 O N N 124 DC N3 N N N 125 DC C4 C N N 126 DC N4 N N N 127 DC C5 C N N 128 DC C6 C N N 129 DC HOP3 H N N 130 DC HOP2 H N N 131 DC "H5'" H N N 132 DC "H5''" H N N 133 DC "H4'" H N N 134 DC "H3'" H N N 135 DC "HO3'" H N N 136 DC "H2'" H N N 137 DC "H2''" H N N 138 DC "H1'" H N N 139 DC H41 H N N 140 DC H42 H N N 141 DC H5 H N N 142 DC H6 H N N 143 DG OP3 O N N 144 DG P P N N 145 DG OP1 O N N 146 DG OP2 O N N 147 DG "O5'" O N N 148 DG "C5'" C N N 149 DG "C4'" C N R 150 DG "O4'" O N N 151 DG "C3'" C N S 152 DG "O3'" O N N 153 DG "C2'" C N N 154 DG "C1'" C N R 155 DG N9 N Y N 156 DG C8 C Y N 157 DG N7 N Y N 158 DG C5 C Y N 159 DG C6 C N N 160 DG O6 O N N 161 DG N1 N N N 162 DG C2 C N N 163 DG N2 N N N 164 DG N3 N N N 165 DG C4 C Y N 166 DG HOP3 H N N 167 DG HOP2 H N N 168 DG "H5'" H N N 169 DG "H5''" H N N 170 DG "H4'" H N N 171 DG "H3'" H N N 172 DG "HO3'" H N N 173 DG "H2'" H N N 174 DG "H2''" H N N 175 DG "H1'" H N N 176 DG H8 H N N 177 DG H1 H N N 178 DG H21 H N N 179 DG H22 H N N 180 DT OP3 O N N 181 DT P P N N 182 DT OP1 O N N 183 DT OP2 O N N 184 DT "O5'" O N N 185 DT "C5'" C N N 186 DT "C4'" C N R 187 DT "O4'" O N N 188 DT "C3'" C N S 189 DT "O3'" O N N 190 DT "C2'" C N N 191 DT "C1'" C N R 192 DT N1 N N N 193 DT C2 C N N 194 DT O2 O N N 195 DT N3 N N N 196 DT C4 C N N 197 DT O4 O N N 198 DT C5 C N N 199 DT C7 C N N 200 DT C6 C N N 201 DT HOP3 H N N 202 DT HOP2 H N N 203 DT "H5'" H N N 204 DT "H5''" H N N 205 DT "H4'" H N N 206 DT "H3'" H N N 207 DT "HO3'" H N N 208 DT "H2'" H N N 209 DT "H2''" H N N 210 DT "H1'" H N N 211 DT H3 H N N 212 DT H71 H N N 213 DT H72 H N N 214 DT H73 H N N 215 DT H6 H N N 216 EPE N1 N N N 217 EPE C2 C N N 218 EPE C3 C N N 219 EPE N4 N N N 220 EPE C5 C N N 221 EPE C6 C N N 222 EPE C7 C N N 223 EPE C8 C N N 224 EPE O8 O N N 225 EPE C9 C N N 226 EPE C10 C N N 227 EPE S S N N 228 EPE O1S O N N 229 EPE O2S O N N 230 EPE O3S O N N 231 EPE H21 H N N 232 EPE H22 H N N 233 EPE H31 H N N 234 EPE H32 H N N 235 EPE H51 H N N 236 EPE H52 H N N 237 EPE H61 H N N 238 EPE H62 H N N 239 EPE H71 H N N 240 EPE H72 H N N 241 EPE H81 H N N 242 EPE H82 H N N 243 EPE HO8 H N N 244 EPE H91 H N N 245 EPE H92 H N N 246 EPE H101 H N N 247 EPE H102 H N N 248 EPE HOS3 H N N 249 GLN N N N N 250 GLN CA C N S 251 GLN C C N N 252 GLN O O N N 253 GLN CB C N N 254 GLN CG C N N 255 GLN CD C N N 256 GLN OE1 O N N 257 GLN NE2 N N N 258 GLN OXT O N N 259 GLN H H N N 260 GLN H2 H N N 261 GLN HA H N N 262 GLN HB2 H N N 263 GLN HB3 H N N 264 GLN HG2 H N N 265 GLN HG3 H N N 266 GLN HE21 H N N 267 GLN HE22 H N N 268 GLN HXT H N N 269 GLU N N N N 270 GLU CA C N S 271 GLU C C N N 272 GLU O O N N 273 GLU CB C N N 274 GLU CG C N N 275 GLU CD C N N 276 GLU OE1 O N N 277 GLU OE2 O N N 278 GLU OXT O N N 279 GLU H H N N 280 GLU H2 H N N 281 GLU HA H N N 282 GLU HB2 H N N 283 GLU HB3 H N N 284 GLU HG2 H N N 285 GLU HG3 H N N 286 GLU HE2 H N N 287 GLU HXT H N N 288 GLY N N N N 289 GLY CA C N N 290 GLY C C N N 291 GLY O O N N 292 GLY OXT O N N 293 GLY H H N N 294 GLY H2 H N N 295 GLY HA2 H N N 296 GLY HA3 H N N 297 GLY HXT H N N 298 HIS N N N N 299 HIS CA C N S 300 HIS C C N N 301 HIS O O N N 302 HIS CB C N N 303 HIS CG C Y N 304 HIS ND1 N Y N 305 HIS CD2 C Y N 306 HIS CE1 C Y N 307 HIS NE2 N Y N 308 HIS OXT O N N 309 HIS H H N N 310 HIS H2 H N N 311 HIS HA H N N 312 HIS HB2 H N N 313 HIS HB3 H N N 314 HIS HD1 H N N 315 HIS HD2 H N N 316 HIS HE1 H N N 317 HIS HE2 H N N 318 HIS HXT H N N 319 HOH O O N N 320 HOH H1 H N N 321 HOH H2 H N N 322 ILE N N N N 323 ILE CA C N S 324 ILE C C N N 325 ILE O O N N 326 ILE CB C N S 327 ILE CG1 C N N 328 ILE CG2 C N N 329 ILE CD1 C N N 330 ILE OXT O N N 331 ILE H H N N 332 ILE H2 H N N 333 ILE HA H N N 334 ILE HB H N N 335 ILE HG12 H N N 336 ILE HG13 H N N 337 ILE HG21 H N N 338 ILE HG22 H N N 339 ILE HG23 H N N 340 ILE HD11 H N N 341 ILE HD12 H N N 342 ILE HD13 H N N 343 ILE HXT H N N 344 LEU N N N N 345 LEU CA C N S 346 LEU C C N N 347 LEU O O N N 348 LEU CB C N N 349 LEU CG C N N 350 LEU CD1 C N N 351 LEU CD2 C N N 352 LEU OXT O N N 353 LEU H H N N 354 LEU H2 H N N 355 LEU HA H N N 356 LEU HB2 H N N 357 LEU HB3 H N N 358 LEU HG H N N 359 LEU HD11 H N N 360 LEU HD12 H N N 361 LEU HD13 H N N 362 LEU HD21 H N N 363 LEU HD22 H N N 364 LEU HD23 H N N 365 LEU HXT H N N 366 LYS N N N N 367 LYS CA C N S 368 LYS C C N N 369 LYS O O N N 370 LYS CB C N N 371 LYS CG C N N 372 LYS CD C N N 373 LYS CE C N N 374 LYS NZ N N N 375 LYS OXT O N N 376 LYS H H N N 377 LYS H2 H N N 378 LYS HA H N N 379 LYS HB2 H N N 380 LYS HB3 H N N 381 LYS HG2 H N N 382 LYS HG3 H N N 383 LYS HD2 H N N 384 LYS HD3 H N N 385 LYS HE2 H N N 386 LYS HE3 H N N 387 LYS HZ1 H N N 388 LYS HZ2 H N N 389 LYS HZ3 H N N 390 LYS HXT H N N 391 MET N N N N 392 MET CA C N S 393 MET C C N N 394 MET O O N N 395 MET CB C N N 396 MET CG C N N 397 MET SD S N N 398 MET CE C N N 399 MET OXT O N N 400 MET H H N N 401 MET H2 H N N 402 MET HA H N N 403 MET HB2 H N N 404 MET HB3 H N N 405 MET HG2 H N N 406 MET HG3 H N N 407 MET HE1 H N N 408 MET HE2 H N N 409 MET HE3 H N N 410 MET HXT H N N 411 PHE N N N N 412 PHE CA C N S 413 PHE C C N N 414 PHE O O N N 415 PHE CB C N N 416 PHE CG C Y N 417 PHE CD1 C Y N 418 PHE CD2 C Y N 419 PHE CE1 C Y N 420 PHE CE2 C Y N 421 PHE CZ C Y N 422 PHE OXT O N N 423 PHE H H N N 424 PHE H2 H N N 425 PHE HA H N N 426 PHE HB2 H N N 427 PHE HB3 H N N 428 PHE HD1 H N N 429 PHE HD2 H N N 430 PHE HE1 H N N 431 PHE HE2 H N N 432 PHE HZ H N N 433 PHE HXT H N N 434 PRO N N N N 435 PRO CA C N S 436 PRO C C N N 437 PRO O O N N 438 PRO CB C N N 439 PRO CG C N N 440 PRO CD C N N 441 PRO OXT O N N 442 PRO H H N N 443 PRO HA H N N 444 PRO HB2 H N N 445 PRO HB3 H N N 446 PRO HG2 H N N 447 PRO HG3 H N N 448 PRO HD2 H N N 449 PRO HD3 H N N 450 PRO HXT H N N 451 SER N N N N 452 SER CA C N S 453 SER C C N N 454 SER O O N N 455 SER CB C N N 456 SER OG O N N 457 SER OXT O N N 458 SER H H N N 459 SER H2 H N N 460 SER HA H N N 461 SER HB2 H N N 462 SER HB3 H N N 463 SER HG H N N 464 SER HXT H N N 465 THR N N N N 466 THR CA C N S 467 THR C C N N 468 THR O O N N 469 THR CB C N R 470 THR OG1 O N N 471 THR CG2 C N N 472 THR OXT O N N 473 THR H H N N 474 THR H2 H N N 475 THR HA H N N 476 THR HB H N N 477 THR HG1 H N N 478 THR HG21 H N N 479 THR HG22 H N N 480 THR HG23 H N N 481 THR HXT H N N 482 TRP N N N N 483 TRP CA C N S 484 TRP C C N N 485 TRP O O N N 486 TRP CB C N N 487 TRP CG C Y N 488 TRP CD1 C Y N 489 TRP CD2 C Y N 490 TRP NE1 N Y N 491 TRP CE2 C Y N 492 TRP CE3 C Y N 493 TRP CZ2 C Y N 494 TRP CZ3 C Y N 495 TRP CH2 C Y N 496 TRP OXT O N N 497 TRP H H N N 498 TRP H2 H N N 499 TRP HA H N N 500 TRP HB2 H N N 501 TRP HB3 H N N 502 TRP HD1 H N N 503 TRP HE1 H N N 504 TRP HE3 H N N 505 TRP HZ2 H N N 506 TRP HZ3 H N N 507 TRP HH2 H N N 508 TRP HXT H N N 509 TYR N N N N 510 TYR CA C N S 511 TYR C C N N 512 TYR O O N N 513 TYR CB C N N 514 TYR CG C Y N 515 TYR CD1 C Y N 516 TYR CD2 C Y N 517 TYR CE1 C Y N 518 TYR CE2 C Y N 519 TYR CZ C Y N 520 TYR OH O N N 521 TYR OXT O N N 522 TYR H H N N 523 TYR H2 H N N 524 TYR HA H N N 525 TYR HB2 H N N 526 TYR HB3 H N N 527 TYR HD1 H N N 528 TYR HD2 H N N 529 TYR HE1 H N N 530 TYR HE2 H N N 531 TYR HH H N N 532 TYR HXT H N N 533 VAL N N N N 534 VAL CA C N S 535 VAL C C N N 536 VAL O O N N 537 VAL CB C N N 538 VAL CG1 C N N 539 VAL CG2 C N N 540 VAL OXT O N N 541 VAL H H N N 542 VAL H2 H N N 543 VAL HA H N N 544 VAL HB H N N 545 VAL HG11 H N N 546 VAL HG12 H N N 547 VAL HG13 H N N 548 VAL HG21 H N N 549 VAL HG22 H N N 550 VAL HG23 H N N 551 VAL HXT H N N 552 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DA OP3 P sing N N 70 DA OP3 HOP3 sing N N 71 DA P OP1 doub N N 72 DA P OP2 sing N N 73 DA P "O5'" sing N N 74 DA OP2 HOP2 sing N N 75 DA "O5'" "C5'" sing N N 76 DA "C5'" "C4'" sing N N 77 DA "C5'" "H5'" sing N N 78 DA "C5'" "H5''" sing N N 79 DA "C4'" "O4'" sing N N 80 DA "C4'" "C3'" sing N N 81 DA "C4'" "H4'" sing N N 82 DA "O4'" "C1'" sing N N 83 DA "C3'" "O3'" sing N N 84 DA "C3'" "C2'" sing N N 85 DA "C3'" "H3'" sing N N 86 DA "O3'" "HO3'" sing N N 87 DA "C2'" "C1'" sing N N 88 DA "C2'" "H2'" sing N N 89 DA "C2'" "H2''" sing N N 90 DA "C1'" N9 sing N N 91 DA "C1'" "H1'" sing N N 92 DA N9 C8 sing Y N 93 DA N9 C4 sing Y N 94 DA C8 N7 doub Y N 95 DA C8 H8 sing N N 96 DA N7 C5 sing Y N 97 DA C5 C6 sing Y N 98 DA C5 C4 doub Y N 99 DA C6 N6 sing N N 100 DA C6 N1 doub Y N 101 DA N6 H61 sing N N 102 DA N6 H62 sing N N 103 DA N1 C2 sing Y N 104 DA C2 N3 doub Y N 105 DA C2 H2 sing N N 106 DA N3 C4 sing Y N 107 DC OP3 P sing N N 108 DC OP3 HOP3 sing N N 109 DC P OP1 doub N N 110 DC P OP2 sing N N 111 DC P "O5'" sing N N 112 DC OP2 HOP2 sing N N 113 DC "O5'" "C5'" sing N N 114 DC "C5'" "C4'" sing N N 115 DC "C5'" "H5'" sing N N 116 DC "C5'" "H5''" sing N N 117 DC "C4'" "O4'" sing N N 118 DC "C4'" "C3'" sing N N 119 DC "C4'" "H4'" sing N N 120 DC "O4'" "C1'" sing N N 121 DC "C3'" "O3'" sing N N 122 DC "C3'" "C2'" sing N N 123 DC "C3'" "H3'" sing N N 124 DC "O3'" "HO3'" sing N N 125 DC "C2'" "C1'" sing N N 126 DC "C2'" "H2'" sing N N 127 DC "C2'" "H2''" sing N N 128 DC "C1'" N1 sing N N 129 DC "C1'" "H1'" sing N N 130 DC N1 C2 sing N N 131 DC N1 C6 sing N N 132 DC C2 O2 doub N N 133 DC C2 N3 sing N N 134 DC N3 C4 doub N N 135 DC C4 N4 sing N N 136 DC C4 C5 sing N N 137 DC N4 H41 sing N N 138 DC N4 H42 sing N N 139 DC C5 C6 doub N N 140 DC C5 H5 sing N N 141 DC C6 H6 sing N N 142 DG OP3 P sing N N 143 DG OP3 HOP3 sing N N 144 DG P OP1 doub N N 145 DG P OP2 sing N N 146 DG P "O5'" sing N N 147 DG OP2 HOP2 sing N N 148 DG "O5'" "C5'" sing N N 149 DG "C5'" "C4'" sing N N 150 DG "C5'" "H5'" sing N N 151 DG "C5'" "H5''" sing N N 152 DG "C4'" "O4'" sing N N 153 DG "C4'" "C3'" sing N N 154 DG "C4'" "H4'" sing N N 155 DG "O4'" "C1'" sing N N 156 DG "C3'" "O3'" sing N N 157 DG "C3'" "C2'" sing N N 158 DG "C3'" "H3'" sing N N 159 DG "O3'" "HO3'" sing N N 160 DG "C2'" "C1'" sing N N 161 DG "C2'" "H2'" sing N N 162 DG "C2'" "H2''" sing N N 163 DG "C1'" N9 sing N N 164 DG "C1'" "H1'" sing N N 165 DG N9 C8 sing Y N 166 DG N9 C4 sing Y N 167 DG C8 N7 doub Y N 168 DG C8 H8 sing N N 169 DG N7 C5 sing Y N 170 DG C5 C6 sing N N 171 DG C5 C4 doub Y N 172 DG C6 O6 doub N N 173 DG C6 N1 sing N N 174 DG N1 C2 sing N N 175 DG N1 H1 sing N N 176 DG C2 N2 sing N N 177 DG C2 N3 doub N N 178 DG N2 H21 sing N N 179 DG N2 H22 sing N N 180 DG N3 C4 sing N N 181 DT OP3 P sing N N 182 DT OP3 HOP3 sing N N 183 DT P OP1 doub N N 184 DT P OP2 sing N N 185 DT P "O5'" sing N N 186 DT OP2 HOP2 sing N N 187 DT "O5'" "C5'" sing N N 188 DT "C5'" "C4'" sing N N 189 DT "C5'" "H5'" sing N N 190 DT "C5'" "H5''" sing N N 191 DT "C4'" "O4'" sing N N 192 DT "C4'" "C3'" sing N N 193 DT "C4'" "H4'" sing N N 194 DT "O4'" "C1'" sing N N 195 DT "C3'" "O3'" sing N N 196 DT "C3'" "C2'" sing N N 197 DT "C3'" "H3'" sing N N 198 DT "O3'" "HO3'" sing N N 199 DT "C2'" "C1'" sing N N 200 DT "C2'" "H2'" sing N N 201 DT "C2'" "H2''" sing N N 202 DT "C1'" N1 sing N N 203 DT "C1'" "H1'" sing N N 204 DT N1 C2 sing N N 205 DT N1 C6 sing N N 206 DT C2 O2 doub N N 207 DT C2 N3 sing N N 208 DT N3 C4 sing N N 209 DT N3 H3 sing N N 210 DT C4 O4 doub N N 211 DT C4 C5 sing N N 212 DT C5 C7 sing N N 213 DT C5 C6 doub N N 214 DT C7 H71 sing N N 215 DT C7 H72 sing N N 216 DT C7 H73 sing N N 217 DT C6 H6 sing N N 218 EPE N1 C2 sing N N 219 EPE N1 C6 sing N N 220 EPE N1 C9 sing N N 221 EPE C2 C3 sing N N 222 EPE C2 H21 sing N N 223 EPE C2 H22 sing N N 224 EPE C3 N4 sing N N 225 EPE C3 H31 sing N N 226 EPE C3 H32 sing N N 227 EPE N4 C5 sing N N 228 EPE N4 C7 sing N N 229 EPE C5 C6 sing N N 230 EPE C5 H51 sing N N 231 EPE C5 H52 sing N N 232 EPE C6 H61 sing N N 233 EPE C6 H62 sing N N 234 EPE C7 C8 sing N N 235 EPE C7 H71 sing N N 236 EPE C7 H72 sing N N 237 EPE C8 O8 sing N N 238 EPE C8 H81 sing N N 239 EPE C8 H82 sing N N 240 EPE O8 HO8 sing N N 241 EPE C9 C10 sing N N 242 EPE C9 H91 sing N N 243 EPE C9 H92 sing N N 244 EPE C10 S sing N N 245 EPE C10 H101 sing N N 246 EPE C10 H102 sing N N 247 EPE S O1S doub N N 248 EPE S O2S doub N N 249 EPE S O3S sing N N 250 EPE O3S HOS3 sing N N 251 GLN N CA sing N N 252 GLN N H sing N N 253 GLN N H2 sing N N 254 GLN CA C sing N N 255 GLN CA CB sing N N 256 GLN CA HA sing N N 257 GLN C O doub N N 258 GLN C OXT sing N N 259 GLN CB CG sing N N 260 GLN CB HB2 sing N N 261 GLN CB HB3 sing N N 262 GLN CG CD sing N N 263 GLN CG HG2 sing N N 264 GLN CG HG3 sing N N 265 GLN CD OE1 doub N N 266 GLN CD NE2 sing N N 267 GLN NE2 HE21 sing N N 268 GLN NE2 HE22 sing N N 269 GLN OXT HXT sing N N 270 GLU N CA sing N N 271 GLU N H sing N N 272 GLU N H2 sing N N 273 GLU CA C sing N N 274 GLU CA CB sing N N 275 GLU CA HA sing N N 276 GLU C O doub N N 277 GLU C OXT sing N N 278 GLU CB CG sing N N 279 GLU CB HB2 sing N N 280 GLU CB HB3 sing N N 281 GLU CG CD sing N N 282 GLU CG HG2 sing N N 283 GLU CG HG3 sing N N 284 GLU CD OE1 doub N N 285 GLU CD OE2 sing N N 286 GLU OE2 HE2 sing N N 287 GLU OXT HXT sing N N 288 GLY N CA sing N N 289 GLY N H sing N N 290 GLY N H2 sing N N 291 GLY CA C sing N N 292 GLY CA HA2 sing N N 293 GLY CA HA3 sing N N 294 GLY C O doub N N 295 GLY C OXT sing N N 296 GLY OXT HXT sing N N 297 HIS N CA sing N N 298 HIS N H sing N N 299 HIS N H2 sing N N 300 HIS CA C sing N N 301 HIS CA CB sing N N 302 HIS CA HA sing N N 303 HIS C O doub N N 304 HIS C OXT sing N N 305 HIS CB CG sing N N 306 HIS CB HB2 sing N N 307 HIS CB HB3 sing N N 308 HIS CG ND1 sing Y N 309 HIS CG CD2 doub Y N 310 HIS ND1 CE1 doub Y N 311 HIS ND1 HD1 sing N N 312 HIS CD2 NE2 sing Y N 313 HIS CD2 HD2 sing N N 314 HIS CE1 NE2 sing Y N 315 HIS CE1 HE1 sing N N 316 HIS NE2 HE2 sing N N 317 HIS OXT HXT sing N N 318 HOH O H1 sing N N 319 HOH O H2 sing N N 320 ILE N CA sing N N 321 ILE N H sing N N 322 ILE N H2 sing N N 323 ILE CA C sing N N 324 ILE CA CB sing N N 325 ILE CA HA sing N N 326 ILE C O doub N N 327 ILE C OXT sing N N 328 ILE CB CG1 sing N N 329 ILE CB CG2 sing N N 330 ILE CB HB sing N N 331 ILE CG1 CD1 sing N N 332 ILE CG1 HG12 sing N N 333 ILE CG1 HG13 sing N N 334 ILE CG2 HG21 sing N N 335 ILE CG2 HG22 sing N N 336 ILE CG2 HG23 sing N N 337 ILE CD1 HD11 sing N N 338 ILE CD1 HD12 sing N N 339 ILE CD1 HD13 sing N N 340 ILE OXT HXT sing N N 341 LEU N CA sing N N 342 LEU N H sing N N 343 LEU N H2 sing N N 344 LEU CA C sing N N 345 LEU CA CB sing N N 346 LEU CA HA sing N N 347 LEU C O doub N N 348 LEU C OXT sing N N 349 LEU CB CG sing N N 350 LEU CB HB2 sing N N 351 LEU CB HB3 sing N N 352 LEU CG CD1 sing N N 353 LEU CG CD2 sing N N 354 LEU CG HG sing N N 355 LEU CD1 HD11 sing N N 356 LEU CD1 HD12 sing N N 357 LEU CD1 HD13 sing N N 358 LEU CD2 HD21 sing N N 359 LEU CD2 HD22 sing N N 360 LEU CD2 HD23 sing N N 361 LEU OXT HXT sing N N 362 LYS N CA sing N N 363 LYS N H sing N N 364 LYS N H2 sing N N 365 LYS CA C sing N N 366 LYS CA CB sing N N 367 LYS CA HA sing N N 368 LYS C O doub N N 369 LYS C OXT sing N N 370 LYS CB CG sing N N 371 LYS CB HB2 sing N N 372 LYS CB HB3 sing N N 373 LYS CG CD sing N N 374 LYS CG HG2 sing N N 375 LYS CG HG3 sing N N 376 LYS CD CE sing N N 377 LYS CD HD2 sing N N 378 LYS CD HD3 sing N N 379 LYS CE NZ sing N N 380 LYS CE HE2 sing N N 381 LYS CE HE3 sing N N 382 LYS NZ HZ1 sing N N 383 LYS NZ HZ2 sing N N 384 LYS NZ HZ3 sing N N 385 LYS OXT HXT sing N N 386 MET N CA sing N N 387 MET N H sing N N 388 MET N H2 sing N N 389 MET CA C sing N N 390 MET CA CB sing N N 391 MET CA HA sing N N 392 MET C O doub N N 393 MET C OXT sing N N 394 MET CB CG sing N N 395 MET CB HB2 sing N N 396 MET CB HB3 sing N N 397 MET CG SD sing N N 398 MET CG HG2 sing N N 399 MET CG HG3 sing N N 400 MET SD CE sing N N 401 MET CE HE1 sing N N 402 MET CE HE2 sing N N 403 MET CE HE3 sing N N 404 MET OXT HXT sing N N 405 PHE N CA sing N N 406 PHE N H sing N N 407 PHE N H2 sing N N 408 PHE CA C sing N N 409 PHE CA CB sing N N 410 PHE CA HA sing N N 411 PHE C O doub N N 412 PHE C OXT sing N N 413 PHE CB CG sing N N 414 PHE CB HB2 sing N N 415 PHE CB HB3 sing N N 416 PHE CG CD1 doub Y N 417 PHE CG CD2 sing Y N 418 PHE CD1 CE1 sing Y N 419 PHE CD1 HD1 sing N N 420 PHE CD2 CE2 doub Y N 421 PHE CD2 HD2 sing N N 422 PHE CE1 CZ doub Y N 423 PHE CE1 HE1 sing N N 424 PHE CE2 CZ sing Y N 425 PHE CE2 HE2 sing N N 426 PHE CZ HZ sing N N 427 PHE OXT HXT sing N N 428 PRO N CA sing N N 429 PRO N CD sing N N 430 PRO N H sing N N 431 PRO CA C sing N N 432 PRO CA CB sing N N 433 PRO CA HA sing N N 434 PRO C O doub N N 435 PRO C OXT sing N N 436 PRO CB CG sing N N 437 PRO CB HB2 sing N N 438 PRO CB HB3 sing N N 439 PRO CG CD sing N N 440 PRO CG HG2 sing N N 441 PRO CG HG3 sing N N 442 PRO CD HD2 sing N N 443 PRO CD HD3 sing N N 444 PRO OXT HXT sing N N 445 SER N CA sing N N 446 SER N H sing N N 447 SER N H2 sing N N 448 SER CA C sing N N 449 SER CA CB sing N N 450 SER CA HA sing N N 451 SER C O doub N N 452 SER C OXT sing N N 453 SER CB OG sing N N 454 SER CB HB2 sing N N 455 SER CB HB3 sing N N 456 SER OG HG sing N N 457 SER OXT HXT sing N N 458 THR N CA sing N N 459 THR N H sing N N 460 THR N H2 sing N N 461 THR CA C sing N N 462 THR CA CB sing N N 463 THR CA HA sing N N 464 THR C O doub N N 465 THR C OXT sing N N 466 THR CB OG1 sing N N 467 THR CB CG2 sing N N 468 THR CB HB sing N N 469 THR OG1 HG1 sing N N 470 THR CG2 HG21 sing N N 471 THR CG2 HG22 sing N N 472 THR CG2 HG23 sing N N 473 THR OXT HXT sing N N 474 TRP N CA sing N N 475 TRP N H sing N N 476 TRP N H2 sing N N 477 TRP CA C sing N N 478 TRP CA CB sing N N 479 TRP CA HA sing N N 480 TRP C O doub N N 481 TRP C OXT sing N N 482 TRP CB CG sing N N 483 TRP CB HB2 sing N N 484 TRP CB HB3 sing N N 485 TRP CG CD1 doub Y N 486 TRP CG CD2 sing Y N 487 TRP CD1 NE1 sing Y N 488 TRP CD1 HD1 sing N N 489 TRP CD2 CE2 doub Y N 490 TRP CD2 CE3 sing Y N 491 TRP NE1 CE2 sing Y N 492 TRP NE1 HE1 sing N N 493 TRP CE2 CZ2 sing Y N 494 TRP CE3 CZ3 doub Y N 495 TRP CE3 HE3 sing N N 496 TRP CZ2 CH2 doub Y N 497 TRP CZ2 HZ2 sing N N 498 TRP CZ3 CH2 sing Y N 499 TRP CZ3 HZ3 sing N N 500 TRP CH2 HH2 sing N N 501 TRP OXT HXT sing N N 502 TYR N CA sing N N 503 TYR N H sing N N 504 TYR N H2 sing N N 505 TYR CA C sing N N 506 TYR CA CB sing N N 507 TYR CA HA sing N N 508 TYR C O doub N N 509 TYR C OXT sing N N 510 TYR CB CG sing N N 511 TYR CB HB2 sing N N 512 TYR CB HB3 sing N N 513 TYR CG CD1 doub Y N 514 TYR CG CD2 sing Y N 515 TYR CD1 CE1 sing Y N 516 TYR CD1 HD1 sing N N 517 TYR CD2 CE2 doub Y N 518 TYR CD2 HD2 sing N N 519 TYR CE1 CZ doub Y N 520 TYR CE1 HE1 sing N N 521 TYR CE2 CZ sing Y N 522 TYR CE2 HE2 sing N N 523 TYR CZ OH sing N N 524 TYR OH HH sing N N 525 TYR OXT HXT sing N N 526 VAL N CA sing N N 527 VAL N H sing N N 528 VAL N H2 sing N N 529 VAL CA C sing N N 530 VAL CA CB sing N N 531 VAL CA HA sing N N 532 VAL C O doub N N 533 VAL C OXT sing N N 534 VAL CB CG1 sing N N 535 VAL CB CG2 sing N N 536 VAL CB HB sing N N 537 VAL CG1 HG11 sing N N 538 VAL CG1 HG12 sing N N 539 VAL CG1 HG13 sing N N 540 VAL CG2 HG21 sing N N 541 VAL CG2 HG22 sing N N 542 VAL CG2 HG23 sing N N 543 VAL OXT HXT sing N N 544 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3IRR 'double helix' 3IRR 'z-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 D DC 3 1_555 E DG 15 1_555 0.826 -0.265 -0.159 -9.578 0.037 -7.471 1 F_DC1:DG13_G F 1 ? G 13 ? 19 1 1 D DG 4 1_555 E DC 14 1_555 -0.095 0.008 -0.258 2.603 -3.773 -4.327 2 F_DG2:DC12_G F 2 ? G 12 ? 19 1 1 D DC 5 1_555 E DG 13 1_555 0.857 0.059 -0.076 -8.142 0.567 2.375 3 F_DC3:DG11_G F 3 ? G 11 ? 19 1 1 D DG 6 1_555 E DC 12 1_555 -0.802 0.043 -0.065 11.821 -1.701 4.548 4 F_DG4:DC10_G F 4 ? G 10 ? 19 1 1 D DC 7 1_555 E DG 11 1_555 0.374 -0.117 0.138 -5.599 2.017 -3.201 5 F_DC5:DG9_G F 5 ? G 9 ? 19 1 1 D DG 8 1_555 E DC 10 1_555 -0.375 -0.023 -0.264 -5.208 0.432 0.011 6 F_DG6:DC8_G F 6 ? G 8 ? 19 1 1 D DT 9 1_555 E DA 9 1_555 -0.058 -0.699 -0.106 -40.789 6.858 -170.055 7 F_DT7:DA7_G F 7 ? G 7 ? ? ? 1 D DC 10 1_555 E DG 8 1_555 -0.550 0.055 0.488 -3.552 2.186 1.811 8 F_DC8:DG6_G F 8 ? G 6 ? 19 1 1 D DG 11 1_555 E DC 7 1_555 0.326 -0.180 0.475 0.573 0.116 2.109 9 F_DG9:DC5_G F 9 ? G 5 ? 19 1 1 D DC 12 1_555 E DG 6 1_555 -1.009 -0.056 0.348 6.300 -4.074 -2.896 10 F_DC10:DG4_G F 10 ? G 4 ? 19 1 1 D DG 13 1_555 E DC 5 1_555 1.101 0.388 0.601 -9.451 0.397 -9.055 11 F_DG11:DC3_G F 11 ? G 3 ? ? ? 1 D DC 14 1_555 E DG 4 1_555 -0.514 -0.304 0.350 8.338 5.051 2.622 12 F_DC12:DG2_G F 12 ? G 2 ? 19 1 1 D DG 15 1_555 E DC 3 1_555 0.610 -0.154 0.171 -5.386 9.515 -0.585 13 F_DG13:DC1_G F 13 ? G 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 D DC 3 1_555 E DG 15 1_555 D DG 4 1_555 E DC 14 1_555 0.230 5.511 -3.952 -0.385 -0.913 4.530 57.143 1.779 -4.965 -11.376 4.793 4.637 1 FF_DC1DG2:DC12DG13_GG F 1 ? G 13 ? F 2 ? G 12 ? 1 D DG 4 1_555 E DC 14 1_555 D DC 5 1_555 E DG 13 1_555 0.358 -1.331 -3.256 -1.642 -6.829 48.233 -2.121 -0.312 -3.062 -8.305 1.997 48.712 2 FF_DG2DC3:DG11DC12_GG F 2 ? G 12 ? F 3 ? G 11 ? 1 D DC 5 1_555 E DG 13 1_555 D DG 6 1_555 E DC 12 1_555 0.048 5.564 -3.907 0.626 -2.581 6.755 30.125 -3.731 -5.609 -20.872 -5.058 7.258 3 FF_DC3DG4:DC10DG11_GG F 3 ? G 11 ? F 4 ? G 10 ? 1 D DG 6 1_555 E DC 12 1_555 D DC 7 1_555 E DG 11 1_555 -0.136 -1.051 -3.013 -2.402 -6.522 51.116 -1.609 0.304 -2.859 -7.519 2.769 51.555 4 FF_DG4DC5:DG9DC10_GG F 4 ? G 10 ? F 5 ? G 9 ? 1 D DC 7 1_555 E DG 11 1_555 D DG 8 1_555 E DC 10 1_555 0.182 5.026 -3.523 2.777 -1.798 4.201 37.971 -26.533 -4.363 -20.779 -32.095 5.346 5 FF_DC5DG6:DC8DG9_GG F 5 ? G 9 ? F 6 ? G 8 ? 1 D DG 8 1_555 E DC 10 1_555 D DT 9 1_555 E DA 9 1_555 -4.919 2.960 -0.148 -42.614 -98.026 114.298 1.490 2.631 -0.478 -53.266 23.156 142.300 6 FF_DG6DT7:DA7DC8_GG F 6 ? G 8 ? F 7 ? G 7 ? 1 D DC 10 1_555 E DG 8 1_555 D DG 11 1_555 E DC 7 1_555 -0.234 5.358 3.510 -0.404 5.138 -5.071 -49.624 -2.417 -1.356 -45.354 -3.570 -7.229 7 FF_DC8DG9:DC5DG6_GG F 8 ? G 6 ? F 9 ? G 5 ? 1 D DG 11 1_555 E DC 7 1_555 D DC 12 1_555 E DG 6 1_555 -0.413 -1.445 3.320 -0.350 -8.973 -51.354 2.231 -0.493 3.042 10.265 -0.400 -52.080 8 FF_DG9DC10:DG4DC5_GG F 9 ? G 5 ? F 10 ? G 4 ? 1 D DC 12 1_555 E DG 6 1_555 D DG 13 1_555 E DC 5 1_555 -0.287 5.297 4.134 -1.304 2.834 -0.916 -100.159 -8.194 -3.567 -66.893 -30.774 -3.251 9 FF_DC10DG11:DC3DG4_GG F 10 ? G 4 ? F 11 ? G 3 ? 1 D DG 13 1_555 E DC 5 1_555 D DC 14 1_555 E DG 4 1_555 0.615 -0.788 3.071 1.060 -3.175 -54.012 1.048 0.736 3.012 3.492 1.166 -54.108 10 FF_DG11DC12:DG2DC3_GG F 11 ? G 3 ? F 12 ? G 2 ? 1 D DC 14 1_555 E DG 4 1_555 D DG 15 1_555 E DC 3 1_555 -0.372 5.293 4.040 4.165 -0.350 -3.879 -50.497 28.528 3.345 3.950 46.993 -5.702 11 FF_DC12DG13:DC1DG2_GG F 12 ? G 2 ? F 13 ? G 1 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' EPE 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1QBJ _pdbx_initial_refinement_model.details 'PDB entry 1QBJ' #