HEADER TRANSFERASE, HYDROLASE 26-AUG-09 3ISN TITLE CRYSTAL STRUCTURE OF HIV-1 RT BOUND TO A 6-VINYLPYRIMIDINE INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: REVERSE TRANSCRIPTASE/RIBONUCLEASE H; COMPND 3 CHAIN: C; COMPND 4 SYNONYM: HIV-1 REVERSE TRANSCRIPTASE, P66 RT; COMPND 5 EC: 2.7.7.49, 2.7.7.7, 3.1.26.4; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: P51 RT; COMPND 9 CHAIN: D; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS; SOURCE 3 ORGANISM_COMMON: HIV-1; SOURCE 4 ORGANISM_TAXID: 11678; SOURCE 5 STRAIN: TYPE 1 BH10; SOURCE 6 GENE: GAG-POL; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS; SOURCE 12 ORGANISM_COMMON: HIV-1; SOURCE 13 ORGANISM_TAXID: 11678; SOURCE 14 STRAIN: TYPE 1 BH10; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS HIV-1, INHIBITOR, RT, TRANSFERASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR E.ENNIFAR,S.FREISZ,G.BEC,P.DUMAS,M.BOTTA,M.RADI REVDAT 2 01-NOV-23 3ISN 1 REMARK REVDAT 1 16-MAR-10 3ISN 0 JRNL AUTH S.FREISZ,G.BEC,M.RADI,P.WOLFF,E.CRESPAN,L.ANGELI,P.DUMAS, JRNL AUTH 2 G.MAGA,M.BOTTA,E.ENNIFAR JRNL TITL CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE BOUND TO A JRNL TITL 2 NON-NUCLEOSIDE INHIBITOR WITH A NOVEL MECHANISM OF ACTION JRNL REF ANGEW.CHEM.INT.ED.ENGL. V. 49 1805 2010 JRNL REFN ISSN 1433-7851 JRNL PMID 20135654 JRNL DOI 10.1002/ANIE.200905651 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.4_57) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.10 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 88.8 REMARK 3 NUMBER OF REFLECTIONS : 43911 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.224 REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.281 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.550 REMARK 3 FREE R VALUE TEST SET COUNT : 1998 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.1117 - 6.0202 1.00 3479 165 0.1878 0.2397 REMARK 3 2 6.0202 - 4.7797 1.00 3412 163 0.1852 0.2343 REMARK 3 3 4.7797 - 4.1759 1.00 3380 161 0.1707 0.2126 REMARK 3 4 4.1759 - 3.7942 0.81 2737 131 0.1912 0.2744 REMARK 3 5 3.7942 - 3.5223 0.77 2600 123 0.2144 0.2685 REMARK 3 6 3.5223 - 3.3147 0.70 2352 113 0.2455 0.2833 REMARK 3 7 3.3147 - 3.1487 0.99 3323 159 0.2412 0.3254 REMARK 3 8 3.1487 - 3.0117 1.00 3350 159 0.2349 0.3135 REMARK 3 9 3.0117 - 2.8958 1.00 3348 159 0.2365 0.3036 REMARK 3 10 2.8958 - 2.7959 1.00 3381 162 0.2618 0.4177 REMARK 3 11 2.7959 - 2.7084 1.00 3359 160 0.2926 0.3767 REMARK 3 12 2.7084 - 2.6310 0.20 668 32 0.3237 0.2880 REMARK 3 13 2.6310 - 2.5618 1.00 3319 158 0.3091 0.3828 REMARK 3 14 2.5618 - 2.4993 0.95 3205 153 0.4562 0.4468 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.32 REMARK 3 B_SOL : 50.00 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.410 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 35.050 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 52.08 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 63.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -6.29200 REMARK 3 B22 (A**2) : 8.35000 REMARK 3 B33 (A**2) : 1.62700 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 6.84000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 8173 REMARK 3 ANGLE : 1.353 11109 REMARK 3 CHIRALITY : 0.085 1205 REMARK 3 PLANARITY : 0.007 1399 REMARK 3 DIHEDRAL : 19.756 3072 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3ISN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-AUG-09. REMARK 100 THE DEPOSITION ID IS D_1000054815. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-DEC-08 REMARK 200 TEMPERATURE (KELVIN) : 90 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.2824 REMARK 200 MONOCHROMATOR : CRYSTAL REMARK 200 OPTICS : CRYSTAL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49675 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 82.3 REMARK 200 DATA REDUNDANCY : 8.100 REMARK 200 R MERGE (I) : 0.07600 REMARK 200 R SYM (I) : 0.06200 REMARK 200 FOR THE DATA SET : 26.4900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.56 REMARK 200 COMPLETENESS FOR SHELL (%) : 67.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.54200 REMARK 200 R SYM FOR SHELL (I) : 0.73700 REMARK 200 FOR SHELL : 3.530 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ID 1DLO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM BIS-TRIS , 25% PEG 3350, 200MM REMARK 280 AMMONIUM SULFATE, PH 6.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 112.56050 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.09100 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 112.56050 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 36.09100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 45430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH C 586 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG C 557 REMARK 465 LYS C 558 REMARK 465 ILE C 559 REMARK 465 LEU C 560 REMARK 465 LYS D 219 REMARK 465 LYS D 220 REMARK 465 HIS D 221 REMARK 465 GLN D 222 REMARK 465 LYS D 223 REMARK 465 GLU D 224 REMARK 465 PRO D 225 REMARK 465 PRO D 226 REMARK 465 PHE D 227 REMARK 465 LEU D 228 REMARK 465 TRP D 229 REMARK 465 MET D 230 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO C 52 C - N - CA ANGL. DEV. = 10.7 DEGREES REMARK 500 PRO D 420 C - N - CA ANGL. DEV. = 11.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS C 20 55.71 -148.81 REMARK 500 PRO C 25 -159.03 -83.28 REMARK 500 LEU C 26 -165.57 150.94 REMARK 500 THR C 27 133.17 -28.97 REMARK 500 ALA C 33 -61.13 71.59 REMARK 500 PRO C 52 -7.25 -40.31 REMARK 500 LYS C 66 -118.78 51.55 REMARK 500 LYS C 70 -113.09 12.22 REMARK 500 TRP C 71 -81.71 -125.64 REMARK 500 ARG C 72 122.72 85.15 REMARK 500 GLN C 91 127.94 -37.82 REMARK 500 SER C 117 21.72 178.93 REMARK 500 ASP C 121 107.73 -54.85 REMARK 500 ILE C 135 -76.28 -24.07 REMARK 500 ASN C 137 67.65 -104.74 REMARK 500 MET C 184 -123.44 42.65 REMARK 500 THR C 216 86.89 -173.26 REMARK 500 ASP C 218 100.02 -55.53 REMARK 500 LYS C 220 -91.60 4.93 REMARK 500 HIS C 221 -120.48 61.24 REMARK 500 GLN C 222 38.24 -149.93 REMARK 500 PHE C 227 97.74 96.46 REMARK 500 LYS C 249 -172.51 -175.92 REMARK 500 ALA C 267 -47.85 133.17 REMARK 500 LEU C 283 -74.60 -89.50 REMARK 500 THR C 286 -158.47 -115.00 REMARK 500 LYS C 287 -157.24 -161.61 REMARK 500 ALA C 288 89.30 44.90 REMARK 500 THR C 296 170.96 -58.20 REMARK 500 GLN C 334 91.51 60.09 REMARK 500 PHE C 346 -6.84 81.34 REMARK 500 ARG C 358 -97.36 -57.64 REMARK 500 GLU C 413 115.35 -39.92 REMARK 500 ASN C 418 87.41 -65.74 REMARK 500 THR C 419 -99.53 -123.41 REMARK 500 PRO C 420 -120.14 -80.84 REMARK 500 LYS C 451 -11.54 82.09 REMARK 500 ASN C 471 59.24 34.34 REMARK 500 THR C 472 -168.19 -127.03 REMARK 500 ILE C 542 85.97 32.97 REMARK 500 SER C 553 54.60 -112.97 REMARK 500 PRO D 4 4.47 -58.06 REMARK 500 LYS D 65 -120.90 -77.60 REMARK 500 THR D 69 -103.42 -61.93 REMARK 500 GLN D 85 152.12 -44.46 REMARK 500 TRP D 88 -122.02 50.42 REMARK 500 VAL D 90 45.00 -87.11 REMARK 500 PRO D 95 160.68 -39.75 REMARK 500 PHE D 116 9.85 -67.29 REMARK 500 ASP D 121 128.67 -32.15 REMARK 500 REMARK 500 THIS ENTRY HAS 73 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDM C 561 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3ITH RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 E465Q IS MUTAGENESIS ACCORDING TO REFERENCE 9 OF DATABASE UNIPROTKB/ REMARK 999 SWISS-PROT P03366 (POL_HV1B1). DBREF 3ISN C 1 560 UNP P03366 POL_HV1B1 600 1159 DBREF 3ISN D 1 427 UNP P03366 POL_HV1B1 600 1026 SEQADV 3ISN GLN C 478 UNP P03366 GLU 1077 SEE REMARK 999 SEQRES 1 C 560 PRO ILE SER PRO ILE GLU THR VAL PRO VAL LYS LEU LYS SEQRES 2 C 560 PRO GLY MET ASP GLY PRO LYS VAL LYS GLN TRP PRO LEU SEQRES 3 C 560 THR GLU GLU LYS ILE LYS ALA LEU VAL GLU ILE CYS THR SEQRES 4 C 560 GLU MET GLU LYS GLU GLY LYS ILE SER LYS ILE GLY PRO SEQRES 5 C 560 GLU ASN PRO TYR ASN THR PRO VAL PHE ALA ILE LYS LYS SEQRES 6 C 560 LYS ASP SER THR LYS TRP ARG LYS LEU VAL ASP PHE ARG SEQRES 7 C 560 GLU LEU ASN LYS ARG THR GLN ASP PHE TRP GLU VAL GLN SEQRES 8 C 560 LEU GLY ILE PRO HIS PRO ALA GLY LEU LYS LYS LYS LYS SEQRES 9 C 560 SER VAL THR VAL LEU ASP VAL GLY ASP ALA TYR PHE SER SEQRES 10 C 560 VAL PRO LEU ASP GLU ASP PHE ARG LYS TYR THR ALA PHE SEQRES 11 C 560 THR ILE PRO SER ILE ASN ASN GLU THR PRO GLY ILE ARG SEQRES 12 C 560 TYR GLN TYR ASN VAL LEU PRO GLN GLY TRP LYS GLY SER SEQRES 13 C 560 PRO ALA ILE PHE GLN SER SER MET THR LYS ILE LEU GLU SEQRES 14 C 560 PRO PHE LYS LYS GLN ASN PRO ASP ILE VAL ILE TYR GLN SEQRES 15 C 560 TYR MET ASP ASP LEU TYR VAL GLY SER ASP LEU GLU ILE SEQRES 16 C 560 GLY GLN HIS ARG THR LYS ILE GLU GLU LEU ARG GLN HIS SEQRES 17 C 560 LEU LEU ARG TRP GLY LEU THR THR PRO ASP LYS LYS HIS SEQRES 18 C 560 GLN LYS GLU PRO PRO PHE LEU TRP MET GLY TYR GLU LEU SEQRES 19 C 560 HIS PRO ASP LYS TRP THR VAL GLN PRO ILE VAL LEU PRO SEQRES 20 C 560 GLU LYS ASP SER TRP THR VAL ASN ASP ILE GLN LYS LEU SEQRES 21 C 560 VAL GLY LYS LEU ASN TRP ALA SER GLN ILE TYR PRO GLY SEQRES 22 C 560 ILE LYS VAL ARG GLN LEU CYS LYS LEU LEU ARG GLY THR SEQRES 23 C 560 LYS ALA LEU THR GLU VAL ILE PRO LEU THR GLU GLU ALA SEQRES 24 C 560 GLU LEU GLU LEU ALA GLU ASN ARG GLU ILE LEU LYS GLU SEQRES 25 C 560 PRO VAL HIS GLY VAL TYR TYR ASP PRO SER LYS ASP LEU SEQRES 26 C 560 ILE ALA GLU ILE GLN LYS GLN GLY GLN GLY GLN TRP THR SEQRES 27 C 560 TYR GLN ILE TYR GLN GLU PRO PHE LYS ASN LEU LYS THR SEQRES 28 C 560 GLY LYS TYR ALA ARG MET ARG GLY ALA HIS THR ASN ASP SEQRES 29 C 560 VAL LYS GLN LEU THR GLU ALA VAL GLN LYS ILE THR THR SEQRES 30 C 560 GLU SER ILE VAL ILE TRP GLY LYS THR PRO LYS PHE LYS SEQRES 31 C 560 LEU PRO ILE GLN LYS GLU THR TRP GLU THR TRP TRP THR SEQRES 32 C 560 GLU TYR TRP GLN ALA THR TRP ILE PRO GLU TRP GLU PHE SEQRES 33 C 560 VAL ASN THR PRO PRO LEU VAL LYS LEU TRP TYR GLN LEU SEQRES 34 C 560 GLU LYS GLU PRO ILE VAL GLY ALA GLU THR PHE TYR VAL SEQRES 35 C 560 ASP GLY ALA ALA ASN ARG GLU THR LYS LEU GLY LYS ALA SEQRES 36 C 560 GLY TYR VAL THR ASN LYS GLY ARG GLN LYS VAL VAL PRO SEQRES 37 C 560 LEU THR ASN THR THR ASN GLN LYS THR GLN LEU GLN ALA SEQRES 38 C 560 ILE TYR LEU ALA LEU GLN ASP SER GLY LEU GLU VAL ASN SEQRES 39 C 560 ILE VAL THR ASP SER GLN TYR ALA LEU GLY ILE ILE GLN SEQRES 40 C 560 ALA GLN PRO ASP LYS SER GLU SER GLU LEU VAL ASN GLN SEQRES 41 C 560 ILE ILE GLU GLN LEU ILE LYS LYS GLU LYS VAL TYR LEU SEQRES 42 C 560 ALA TRP VAL PRO ALA HIS LYS GLY ILE GLY GLY ASN GLU SEQRES 43 C 560 GLN VAL ASP LYS LEU VAL SER ALA GLY ILE ARG LYS ILE SEQRES 44 C 560 LEU SEQRES 1 D 427 PRO ILE SER PRO ILE GLU THR VAL PRO VAL LYS LEU LYS SEQRES 2 D 427 PRO GLY MET ASP GLY PRO LYS VAL LYS GLN TRP PRO LEU SEQRES 3 D 427 THR GLU GLU LYS ILE LYS ALA LEU VAL GLU ILE CYS THR SEQRES 4 D 427 GLU MET GLU LYS GLU GLY LYS ILE SER LYS ILE GLY PRO SEQRES 5 D 427 GLU ASN PRO TYR ASN THR PRO VAL PHE ALA ILE LYS LYS SEQRES 6 D 427 LYS ASP SER THR LYS TRP ARG LYS LEU VAL ASP PHE ARG SEQRES 7 D 427 GLU LEU ASN LYS ARG THR GLN ASP PHE TRP GLU VAL GLN SEQRES 8 D 427 LEU GLY ILE PRO HIS PRO ALA GLY LEU LYS LYS LYS LYS SEQRES 9 D 427 SER VAL THR VAL LEU ASP VAL GLY ASP ALA TYR PHE SER SEQRES 10 D 427 VAL PRO LEU ASP GLU ASP PHE ARG LYS TYR THR ALA PHE SEQRES 11 D 427 THR ILE PRO SER ILE ASN ASN GLU THR PRO GLY ILE ARG SEQRES 12 D 427 TYR GLN TYR ASN VAL LEU PRO GLN GLY TRP LYS GLY SER SEQRES 13 D 427 PRO ALA ILE PHE GLN SER SER MET THR LYS ILE LEU GLU SEQRES 14 D 427 PRO PHE LYS LYS GLN ASN PRO ASP ILE VAL ILE TYR GLN SEQRES 15 D 427 TYR MET ASP ASP LEU TYR VAL GLY SER ASP LEU GLU ILE SEQRES 16 D 427 GLY GLN HIS ARG THR LYS ILE GLU GLU LEU ARG GLN HIS SEQRES 17 D 427 LEU LEU ARG TRP GLY LEU THR THR PRO ASP LYS LYS HIS SEQRES 18 D 427 GLN LYS GLU PRO PRO PHE LEU TRP MET GLY TYR GLU LEU SEQRES 19 D 427 HIS PRO ASP LYS TRP THR VAL GLN PRO ILE VAL LEU PRO SEQRES 20 D 427 GLU LYS ASP SER TRP THR VAL ASN ASP ILE GLN LYS LEU SEQRES 21 D 427 VAL GLY LYS LEU ASN TRP ALA SER GLN ILE TYR PRO GLY SEQRES 22 D 427 ILE LYS VAL ARG GLN LEU CYS LYS LEU LEU ARG GLY THR SEQRES 23 D 427 LYS ALA LEU THR GLU VAL ILE PRO LEU THR GLU GLU ALA SEQRES 24 D 427 GLU LEU GLU LEU ALA GLU ASN ARG GLU ILE LEU LYS GLU SEQRES 25 D 427 PRO VAL HIS GLY VAL TYR TYR ASP PRO SER LYS ASP LEU SEQRES 26 D 427 ILE ALA GLU ILE GLN LYS GLN GLY GLN GLY GLN TRP THR SEQRES 27 D 427 TYR GLN ILE TYR GLN GLU PRO PHE LYS ASN LEU LYS THR SEQRES 28 D 427 GLY LYS TYR ALA ARG MET ARG GLY ALA HIS THR ASN ASP SEQRES 29 D 427 VAL LYS GLN LEU THR GLU ALA VAL GLN LYS ILE THR THR SEQRES 30 D 427 GLU SER ILE VAL ILE TRP GLY LYS THR PRO LYS PHE LYS SEQRES 31 D 427 LEU PRO ILE GLN LYS GLU THR TRP GLU THR TRP TRP THR SEQRES 32 D 427 GLU TYR TRP GLN ALA THR TRP ILE PRO GLU TRP GLU PHE SEQRES 33 D 427 VAL ASN THR PRO PRO LEU VAL LYS LEU TRP TYR HET EDM C 561 15 HETNAM EDM 6-ETHENYL-N,N-DIMETHYL-2-(METHYLSULFONYL)PYRIMIDIN-4- HETNAM 2 EDM AMINE FORMUL 3 EDM C9 H13 N3 O2 S FORMUL 4 HOH *204(H2 O) HELIX 1 1 THR C 27 GLU C 44 1 18 HELIX 2 2 PHE C 77 THR C 84 1 8 HELIX 3 3 HIS C 96 LEU C 100 5 5 HELIX 4 4 ASP C 121 ALA C 129 5 9 HELIX 5 5 GLY C 155 GLN C 174 1 20 HELIX 6 6 GLU C 194 TRP C 212 1 19 HELIX 7 7 THR C 253 GLN C 269 1 17 HELIX 8 8 VAL C 276 LEU C 282 1 7 HELIX 9 9 THR C 296 LEU C 310 1 15 HELIX 10 10 ASN C 363 GLY C 384 1 22 HELIX 11 11 GLN C 394 TYR C 405 1 12 HELIX 12 12 THR C 473 ASP C 488 1 16 HELIX 13 13 SER C 499 ALA C 508 1 10 HELIX 14 14 SER C 515 LYS C 528 1 14 HELIX 15 15 ILE C 542 SER C 553 1 12 HELIX 16 16 THR D 27 GLU D 44 1 18 HELIX 17 17 LYS D 66 THR D 69 5 4 HELIX 18 18 PHE D 77 THR D 84 1 8 HELIX 19 19 PHE D 87 GLN D 91 5 5 HELIX 20 20 GLY D 99 LYS D 103 5 5 HELIX 21 21 GLY D 112 VAL D 118 5 7 HELIX 22 22 ASP D 121 ALA D 129 5 9 HELIX 23 23 SER D 134 GLU D 138 5 5 HELIX 24 24 LYS D 154 PHE D 160 1 7 HELIX 25 25 PHE D 160 GLN D 174 1 15 HELIX 26 26 GLU D 194 ARG D 211 1 18 HELIX 27 27 VAL D 254 ALA D 267 1 14 HELIX 28 28 VAL D 276 ARG D 284 1 9 HELIX 29 29 THR D 296 LEU D 310 1 15 HELIX 30 30 ASN D 363 GLY D 384 1 22 HELIX 31 31 GLN D 394 TRP D 402 1 9 HELIX 32 32 THR D 403 TYR D 405 5 3 SHEET 1 A 3 ILE C 47 LYS C 49 0 SHEET 2 A 3 ILE C 142 TYR C 146 -1 O GLN C 145 N SER C 48 SHEET 3 A 3 PHE C 130 ILE C 132 -1 N ILE C 132 O ILE C 142 SHEET 1 B 2 VAL C 60 ALA C 62 0 SHEET 2 B 2 LYS C 73 VAL C 75 -1 O LEU C 74 N PHE C 61 SHEET 1 C 3 SER C 105 ASP C 110 0 SHEET 2 C 3 ASP C 186 SER C 191 -1 O VAL C 189 N THR C 107 SHEET 3 C 3 VAL C 179 TYR C 183 -1 N TYR C 183 O ASP C 186 SHEET 1 D 4 LEU C 228 TRP C 229 0 SHEET 2 D 4 TYR C 232 LEU C 234 -1 O TYR C 232 N TRP C 229 SHEET 3 D 4 TRP C 239 VAL C 241 -1 O THR C 240 N GLU C 233 SHEET 4 D 4 VAL C 314 GLY C 316 -1 O VAL C 314 N VAL C 241 SHEET 1 E 5 ASN C 348 ALA C 355 0 SHEET 2 E 5 GLN C 336 TYR C 342 -1 N ILE C 341 O LYS C 350 SHEET 3 E 5 ILE C 326 LYS C 331 -1 N ILE C 326 O TYR C 342 SHEET 4 E 5 LYS C 388 LEU C 391 1 O LYS C 390 N ALA C 327 SHEET 5 E 5 TRP C 414 PHE C 416 1 O GLU C 415 N LEU C 391 SHEET 1 F 2 HIS C 361 THR C 362 0 SHEET 2 F 2 LYS C 512 SER C 513 -1 O LYS C 512 N THR C 362 SHEET 1 G 5 GLN C 464 LEU C 469 0 SHEET 2 G 5 GLY C 453 THR C 459 -1 N GLY C 453 O LEU C 469 SHEET 3 G 5 GLU C 438 ALA C 446 -1 N TYR C 441 O VAL C 458 SHEET 4 G 5 GLU C 492 THR C 497 1 O ASN C 494 N GLU C 438 SHEET 5 G 5 LYS C 530 TRP C 535 1 O TYR C 532 N ILE C 495 SHEET 1 H 3 ILE D 47 LYS D 49 0 SHEET 2 H 3 ILE D 142 TYR D 146 -1 O GLN D 145 N SER D 48 SHEET 3 H 3 PHE D 130 ILE D 132 -1 N ILE D 132 O ILE D 142 SHEET 1 I 2 VAL D 60 LYS D 64 0 SHEET 2 I 2 TRP D 71 VAL D 75 -1 O ARG D 72 N ILE D 63 SHEET 1 J 3 SER D 105 ASP D 110 0 SHEET 2 J 3 ASP D 186 SER D 191 -1 O VAL D 189 N THR D 107 SHEET 3 J 3 ILE D 178 TYR D 183 -1 N TYR D 181 O TYR D 188 SHEET 1 K 2 TRP D 252 THR D 253 0 SHEET 2 K 2 VAL D 292 ILE D 293 -1 O ILE D 293 N TRP D 252 SHEET 1 L 5 LYS D 347 ALA D 355 0 SHEET 2 L 5 GLN D 336 GLU D 344 -1 N ILE D 341 O LYS D 350 SHEET 3 L 5 ILE D 326 LYS D 331 -1 N GLN D 330 O THR D 338 SHEET 4 L 5 LYS D 388 LEU D 391 1 O LYS D 390 N ALA D 327 SHEET 5 L 5 TRP D 414 PHE D 416 1 O GLU D 415 N PHE D 389 SITE 1 AC1 9 MET C 184 ASP C 186 MET C 230 GLY C 231 SITE 2 AC1 9 LYS C 263 TRP C 266 HOH C 578 HOH C 631 SITE 3 AC1 9 HOH C 672 CRYST1 225.121 72.182 93.516 90.00 108.97 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004442 0.000000 0.001527 0.00000 SCALE2 0.000000 0.013854 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011308 0.00000