HEADER TRANSFERASE 03-SEP-09 3IXC TITLE CRYSTAL STRUCTURE OF HEXAPEPTIDE TRANSFERASE FAMILY PROTEIN FROM TITLE 2 ANAPLASMA PHAGOCYTOPHILUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEXAPEPTIDE TRANSFERASE FAMILY PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ANAPLASMA PHAGOCYTOPHILUM; SOURCE 3 ORGANISM_TAXID: 212042; SOURCE 4 STRAIN: HZ; SOURCE 5 GENE: APH_1197; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: AVA0421 KEYWDS NIAID, SSGCID, SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS KEYWDS 2 DISEASE, GRAM-NEGATIVE BACTERIA, HUMAN GRANULOCYTIC ANAPLASMOSIS, KEYWDS 3 BETA HELIX, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 3 06-SEP-23 3IXC 1 REMARK SEQADV LINK REVDAT 2 13-JUL-11 3IXC 1 VERSN REVDAT 1 22-SEP-09 3IXC 0 JRNL AUTH T.E.EDWARDS,D.R.DAVIES, JRNL AUTH 2 SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE JRNL AUTH 3 (SSGCID) JRNL TITL CRYSTAL STRUCTURE OF HEXAPEPTIDE TRANSFERASE FAMILY PROTEIN JRNL TITL 2 FROM ANAPLASMA PHAGOCYTOPHILUM JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.61 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.61 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 3 NUMBER OF REFLECTIONS : 32887 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.194 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1674 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.61 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.65 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1908 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 80.49 REMARK 3 BIN R VALUE (WORKING SET) : 0.3380 REMARK 3 BIN FREE R VALUE SET COUNT : 81 REMARK 3 BIN FREE R VALUE : 0.3850 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1227 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 195 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 12.38 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.072 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.071 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.044 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.803 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.960 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1367 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1876 ; 1.201 ; 1.962 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 198 ; 6.078 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 50 ;28.041 ;22.800 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 246 ;12.528 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ; 7.959 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 225 ; 0.080 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1016 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 872 ; 0.451 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1419 ; 0.852 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 495 ; 1.523 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 441 ; 2.506 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 15 REMARK 3 ORIGIN FOR THE GROUP (A): 32.0564 7.9680 42.6064 REMARK 3 T TENSOR REMARK 3 T11: 0.1066 T22: 0.0383 REMARK 3 T33: 0.0347 T12: -0.0327 REMARK 3 T13: -0.0129 T23: 0.0304 REMARK 3 L TENSOR REMARK 3 L11: 2.1365 L22: 3.3790 REMARK 3 L33: 8.5329 L12: -0.6610 REMARK 3 L13: 1.9563 L23: 0.0254 REMARK 3 S TENSOR REMARK 3 S11: -0.0309 S12: 0.1445 S13: 0.1571 REMARK 3 S21: -0.3224 S22: -0.0439 S23: -0.1609 REMARK 3 S31: -0.5140 S32: 0.2653 S33: 0.0748 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 16 A 67 REMARK 3 ORIGIN FOR THE GROUP (A): 32.0397 5.4748 53.6075 REMARK 3 T TENSOR REMARK 3 T11: 0.0434 T22: 0.0056 REMARK 3 T33: 0.0341 T12: 0.0060 REMARK 3 T13: -0.0108 T23: -0.0020 REMARK 3 L TENSOR REMARK 3 L11: 0.7891 L22: 1.1700 REMARK 3 L33: 1.8713 L12: 0.1239 REMARK 3 L13: 0.1782 L23: 0.4008 REMARK 3 S TENSOR REMARK 3 S11: -0.0058 S12: 0.0372 S13: 0.1151 REMARK 3 S21: -0.0982 S22: -0.0220 S23: 0.0201 REMARK 3 S31: -0.1764 S32: -0.0011 S33: 0.0277 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 68 A 126 REMARK 3 ORIGIN FOR THE GROUP (A): 23.0227 -2.0529 61.4133 REMARK 3 T TENSOR REMARK 3 T11: 0.0228 T22: 0.0367 REMARK 3 T33: 0.0350 T12: 0.0042 REMARK 3 T13: -0.0129 T23: -0.0242 REMARK 3 L TENSOR REMARK 3 L11: 1.4274 L22: 1.1869 REMARK 3 L33: 1.2286 L12: -0.0467 REMARK 3 L13: -0.4672 L23: 0.1702 REMARK 3 S TENSOR REMARK 3 S11: -0.0052 S12: 0.0463 S13: 0.0633 REMARK 3 S21: -0.0647 S22: -0.0455 S23: 0.0987 REMARK 3 S31: 0.0150 S32: -0.1383 S33: 0.0507 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 127 A 148 REMARK 3 ORIGIN FOR THE GROUP (A): 18.3018 -7.8010 70.9023 REMARK 3 T TENSOR REMARK 3 T11: 0.0416 T22: 0.0574 REMARK 3 T33: 0.0691 T12: -0.0307 REMARK 3 T13: 0.0438 T23: -0.0252 REMARK 3 L TENSOR REMARK 3 L11: 0.4169 L22: 2.1872 REMARK 3 L33: 2.7949 L12: 0.1733 REMARK 3 L13: 0.2356 L23: 0.9002 REMARK 3 S TENSOR REMARK 3 S11: -0.0270 S12: -0.0697 S13: -0.0610 REMARK 3 S21: 0.1524 S22: -0.0398 S23: 0.1967 REMARK 3 S31: 0.2274 S32: -0.2390 S33: 0.0668 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 149 A 160 REMARK 3 ORIGIN FOR THE GROUP (A): 29.1862 5.5097 75.2759 REMARK 3 T TENSOR REMARK 3 T11: 0.0295 T22: 0.0450 REMARK 3 T33: 0.0499 T12: -0.0023 REMARK 3 T13: 0.0097 T23: -0.0317 REMARK 3 L TENSOR REMARK 3 L11: 4.8330 L22: 1.7608 REMARK 3 L33: 5.4056 L12: 2.5257 REMARK 3 L13: -3.9850 L23: -2.7330 REMARK 3 S TENSOR REMARK 3 S11: 0.1064 S12: -0.2106 S13: 0.0173 REMARK 3 S21: 0.0747 S22: -0.1420 S23: 0.0044 REMARK 3 S31: -0.1421 S32: 0.2835 S33: 0.0356 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 161 A 170 REMARK 3 ORIGIN FOR THE GROUP (A): 40.3119 10.5859 63.9356 REMARK 3 T TENSOR REMARK 3 T11: 0.0718 T22: 0.0476 REMARK 3 T33: 0.0571 T12: -0.0295 REMARK 3 T13: -0.0033 T23: -0.0102 REMARK 3 L TENSOR REMARK 3 L11: 6.2482 L22: 5.8276 REMARK 3 L33: 1.1394 L12: -1.9305 REMARK 3 L13: -0.4970 L23: 2.4342 REMARK 3 S TENSOR REMARK 3 S11: 0.0618 S12: 0.0506 S13: 0.2980 REMARK 3 S21: -0.3353 S22: -0.0041 S23: -0.1880 REMARK 3 S31: -0.2065 S32: 0.0638 S33: -0.0577 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : RESIDUAL ONLY REMARK 4 REMARK 4 3IXC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-SEP-09. REMARK 100 THE DEPOSITION ID IS D_1000054982. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-AUG-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E+ SUPERBRIGHT REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944+ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32905 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.610 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : 0.08600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.4600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.61 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.67 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.2 REMARK 200 DATA REDUNDANCY IN SHELL : 2.00 REMARK 200 R MERGE FOR SHELL (I) : 0.39500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.090 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.1.4 REMARK 200 STARTING MODEL: PDB ENTRY 1XHD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: HAMPTON CSHT CONDITION D12, 2.0 M REMARK 280 AMMONIUM PHOSPHATE, 0.1 M TRIS PH 8.5, 26.5 MG/ML PROTEIN, REMARK 280 CRYSTAL TRACKING ID 204803D12, EXPRESSION TAG NOT REMOVED PRIOR REMARK 280 TO CRYSTALLIZATION, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 46.04550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.04550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 46.04550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 46.04550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 46.04550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 46.04550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 46.04550 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 46.04550 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 46.04550 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 46.04550 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 46.04550 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 46.04550 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 46.04550 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 46.04550 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 46.04550 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 46.04550 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 46.04550 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 46.04550 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4760 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -49.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 -1.000000 92.09100 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 -46.04550 REMARK 350 BIOMT3 2 0.000000 -1.000000 0.000000 46.04550 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 46.04550 REMARK 350 BIOMT2 3 0.000000 0.000000 -1.000000 46.04550 REMARK 350 BIOMT3 3 -1.000000 0.000000 0.000000 92.09100 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 262 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 268 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 307 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 347 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -20 REMARK 465 ALA A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 MET A -12 REMARK 465 GLY A -11 REMARK 465 THR A -10 REMARK 465 LEU A -9 REMARK 465 GLU A -8 REMARK 465 ALA A -7 REMARK 465 GLN A -6 REMARK 465 THR A -5 REMARK 465 GLN A -4 REMARK 465 GLY A -3 REMARK 465 PRO A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 ASP A 69 REMARK 465 SER A 70 REMARK 465 MET A 71 REMARK 465 HIS A 72 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 CG SD CE REMARK 470 ARG A 2 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 3 CG CD OE1 OE2 REMARK 470 ASP A 50 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 90 -159.77 -100.02 REMARK 500 ALA A 91 64.41 4.60 REMARK 500 ALA A 91 64.41 -51.14 REMARK 500 ARG A 109 -3.28 73.89 REMARK 500 TYR A 169 -64.09 -93.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 THE METAL ION AT RESIDUE 171 IN CHAIN A IS UNKNOWN REMARK 600 BUT SUSPECTED TO BE MG2+ BASED ON SOME EVIDENCE. REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 171 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 67 ND1 REMARK 620 2 HIS A 67 ND1 5.8 REMARK 620 3 HIS A 85 NE2 98.4 103.8 REMARK 620 4 HIS A 90 NE2 123.8 122.5 76.6 REMARK 620 5 HIS A 90 NE2 124.3 123.1 76.1 0.7 REMARK 620 6 HOH A 197 O 94.5 94.2 113.0 139.6 139.4 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 171 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: ANPHA.01106.A RELATED DB: TARGETDB DBREF 3IXC A 1 170 UNP Q2GIS1 Q2GIS1_ANAPZ 1 170 SEQADV 3IXC MET A -20 UNP Q2GIS1 EXPRESSION TAG SEQADV 3IXC ALA A -19 UNP Q2GIS1 EXPRESSION TAG SEQADV 3IXC HIS A -18 UNP Q2GIS1 EXPRESSION TAG SEQADV 3IXC HIS A -17 UNP Q2GIS1 EXPRESSION TAG SEQADV 3IXC HIS A -16 UNP Q2GIS1 EXPRESSION TAG SEQADV 3IXC HIS A -15 UNP Q2GIS1 EXPRESSION TAG SEQADV 3IXC HIS A -14 UNP Q2GIS1 EXPRESSION TAG SEQADV 3IXC HIS A -13 UNP Q2GIS1 EXPRESSION TAG SEQADV 3IXC MET A -12 UNP Q2GIS1 EXPRESSION TAG SEQADV 3IXC GLY A -11 UNP Q2GIS1 EXPRESSION TAG SEQADV 3IXC THR A -10 UNP Q2GIS1 EXPRESSION TAG SEQADV 3IXC LEU A -9 UNP Q2GIS1 EXPRESSION TAG SEQADV 3IXC GLU A -8 UNP Q2GIS1 EXPRESSION TAG SEQADV 3IXC ALA A -7 UNP Q2GIS1 EXPRESSION TAG SEQADV 3IXC GLN A -6 UNP Q2GIS1 EXPRESSION TAG SEQADV 3IXC THR A -5 UNP Q2GIS1 EXPRESSION TAG SEQADV 3IXC GLN A -4 UNP Q2GIS1 EXPRESSION TAG SEQADV 3IXC GLY A -3 UNP Q2GIS1 EXPRESSION TAG SEQADV 3IXC PRO A -2 UNP Q2GIS1 EXPRESSION TAG SEQADV 3IXC GLY A -1 UNP Q2GIS1 EXPRESSION TAG SEQADV 3IXC SER A 0 UNP Q2GIS1 EXPRESSION TAG SEQRES 1 A 191 MET ALA HIS HIS HIS HIS HIS HIS MET GLY THR LEU GLU SEQRES 2 A 191 ALA GLN THR GLN GLY PRO GLY SER MET ARG GLU VAL LEU SEQRES 3 A 191 VAL PRO TYR ALA GLY VAL SER PRO SER VAL ASP SER THR SEQRES 4 A 191 ALA PHE ILE ALA GLY ASN ALA ARG ILE ILE GLY ASP VAL SEQRES 5 A 191 CYS ILE GLY LYS ASN ALA SER ILE TRP TYR GLY THR VAL SEQRES 6 A 191 LEU ARG GLY ASP VAL ASP LYS ILE GLU VAL GLY GLU GLY SEQRES 7 A 191 THR ASN ILE GLN ASP ASN THR VAL VAL HIS THR ASP SER SEQRES 8 A 191 MET HIS GLY ASP THR VAL ILE GLY LYS PHE VAL THR ILE SEQRES 9 A 191 GLY HIS SER CYS ILE LEU HIS ALA CYS THR LEU GLY ASN SEQRES 10 A 191 ASN ALA PHE VAL GLY MET GLY SER ILE VAL MET ASP ARG SEQRES 11 A 191 ALA VAL MET GLU GLU GLY SER MET LEU ALA ALA GLY SER SEQRES 12 A 191 LEU LEU THR ARG GLY LYS ILE VAL LYS SER GLY GLU LEU SEQRES 13 A 191 TRP ALA GLY ARG PRO ALA LYS PHE LEU ARG MET MET THR SEQRES 14 A 191 GLU GLU GLU ILE LEU TYR LEU GLN LYS SER ALA GLU ASN SEQRES 15 A 191 TYR ILE ALA LEU SER ARG GLY TYR LEU HET MG A 171 1 HETNAM MG MAGNESIUM ION FORMUL 2 MG MG 2+ FORMUL 3 HOH *195(H2 O) HELIX 1 1 THR A 148 GLY A 168 1 21 SHEET 1 A 7 LEU A 5 VAL A 6 0 SHEET 2 A 7 ARG A 26 ILE A 33 1 O GLY A 29 N VAL A 6 SHEET 3 A 7 VAL A 44 VAL A 54 1 O LEU A 45 N ARG A 26 SHEET 4 A 7 VAL A 65 VAL A 66 1 O VAL A 66 N VAL A 44 SHEET 5 A 7 ILE A 88 LEU A 89 1 O LEU A 89 N VAL A 65 SHEET 6 A 7 ILE A 105 VAL A 106 1 O VAL A 106 N ILE A 88 SHEET 7 A 7 LEU A 123 LEU A 124 1 O LEU A 124 N ILE A 105 SHEET 1 B 7 SER A 14 VAL A 15 0 SHEET 2 B 7 ARG A 26 ILE A 33 1 O ILE A 33 N SER A 14 SHEET 3 B 7 VAL A 44 VAL A 54 1 O LEU A 45 N ARG A 26 SHEET 4 B 7 THR A 75 ILE A 77 1 O ILE A 77 N GLU A 53 SHEET 5 B 7 THR A 93 LEU A 94 1 O LEU A 94 N VAL A 76 SHEET 6 B 7 VAL A 111 MET A 112 1 O MET A 112 N THR A 93 SHEET 7 B 7 ILE A 129 VAL A 130 1 O VAL A 130 N VAL A 111 SHEET 1 C 8 PHE A 20 ILE A 21 0 SHEET 2 C 8 SER A 38 ILE A 39 1 O ILE A 39 N PHE A 20 SHEET 3 C 8 ASN A 59 ILE A 60 1 O ILE A 60 N SER A 38 SHEET 4 C 8 THR A 82 ILE A 83 1 O ILE A 83 N ASN A 59 SHEET 5 C 8 PHE A 99 VAL A 100 1 O VAL A 100 N THR A 82 SHEET 6 C 8 MET A 117 LEU A 118 1 O LEU A 118 N PHE A 99 SHEET 7 C 8 GLU A 134 ALA A 137 1 O GLU A 134 N MET A 117 SHEET 8 C 8 LYS A 142 MET A 146 -1 O ARG A 145 N LEU A 135 LINK ND1AHIS A 67 MG MG A 171 1555 1555 2.30 LINK ND1BHIS A 67 MG MG A 171 1555 1555 2.28 LINK NE2 HIS A 85 MG MG A 171 8645 1555 2.35 LINK NE2AHIS A 90 MG MG A 171 1555 1555 2.38 LINK NE2BHIS A 90 MG MG A 171 1555 1555 2.46 LINK MG MG A 171 O HOH A 197 1555 1555 1.97 CISPEP 1 ARG A 139 PRO A 140 0 -3.01 CISPEP 2 ARG A 139 PRO A 140 0 -3.23 SITE 1 AC1 4 HIS A 67 HIS A 85 HIS A 90 HOH A 197 CRYST1 92.091 92.091 92.091 90.00 90.00 90.00 P 21 3 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010859 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010859 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010859 0.00000