HEADER VIRAL PROTEIN 21-JUL-09 3IYB TITLE POLIOVIRUS EARLY RNA-RELEASE INTERMEDIATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GENOME POLYPROTEIN; COMPND 3 CHAIN: 1; COMPND 4 SYNONYM: PROTEIN VP0, VP4-VP2, PROTEIN VP4, VIRION PROTEIN 4, P1A, COMPND 5 PROTEIN VP2, VIRION PROTEIN 2, P1B, PROTEIN VP3, VIRION PROTEIN 3, COMPND 6 P1C, PROTEIN VP1, VIRION PROTEIN 1, P1D, PICORNAIN 2A, PROTEIN 2A, COMPND 7 P2A, PROTEIN 2B, P2B, PROTEIN 2C, P2C, PROTEIN 3A, P3A, PROTEIN 3B, COMPND 8 P3B, VPG, PICORNAIN 3C, PROTEASE 3C, P3C, RNA-DIRECTED RNA POLYMERASE COMPND 9 3D-POL, P3D-POL; COMPND 10 EC: 3.4.22.29, 3.6.1.15, 3.4.22.28, 2.7.7.48; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 2; COMPND 13 MOLECULE: GENOME POLYPROTEIN; COMPND 14 CHAIN: 2; COMPND 15 SYNONYM: PROTEIN VP0, VP4-VP2, PROTEIN VP4, VIRION PROTEIN 4, P1A, COMPND 16 PROTEIN VP2, VIRION PROTEIN 2, P1B, PROTEIN VP3, VIRION PROTEIN 3, COMPND 17 P1C, PROTEIN VP1, VIRION PROTEIN 1, P1D, PICORNAIN 2A, PROTEIN 2A, COMPND 18 P2A, PROTEIN 2B, P2B, PROTEIN 2C, P2C, PROTEIN 3A, P3A, PROTEIN 3B, COMPND 19 P3B, VPG, PICORNAIN 3C, PROTEASE 3C, P3C, RNA-DIRECTED RNA POLYMERASE COMPND 20 3D-POL, P3D-POL; COMPND 21 EC: 3.4.22.29, 3.6.1.15, 3.4.22.28, 2.7.7.48; COMPND 22 ENGINEERED: YES; COMPND 23 MOL_ID: 3; COMPND 24 MOLECULE: PRECURSOR POLYPROTEIN; COMPND 25 CHAIN: 3; COMPND 26 ENGINEERED: YES; COMPND 27 MOL_ID: 4; COMPND 28 MOLECULE: GENOME POLYPROTEIN; COMPND 29 CHAIN: 4; COMPND 30 SYNONYM: PROTEIN VP0, VP4-VP2, PROTEIN VP4, VIRION PROTEIN 4, P1A, COMPND 31 PROTEIN VP2, VIRION PROTEIN 2, P1B, PROTEIN VP3, VIRION PROTEIN 3, COMPND 32 P1C, PROTEIN VP1, VIRION PROTEIN 1, P1D, PICORNAIN 2A, PROTEIN 2A, COMPND 33 P2A, PROTEIN 2B, P2B, PROTEIN 2C, P2C, PROTEIN 3A, P3A, PROTEIN 3B, COMPND 34 P3B, VPG, PICORNAIN 3C, PROTEASE 3C, P3C, RNA-DIRECTED RNA POLYMERASE COMPND 35 3D-POL, P3D-POL; COMPND 36 EC: 3.4.22.29, 3.6.1.15, 3.4.22.28, 2.7.7.48; COMPND 37 ENGINEERED: YES; COMPND 38 MOL_ID: 5; COMPND 39 MOLECULE: VP1 CORE; COMPND 40 CHAIN: 7; COMPND 41 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN POLIOVIRUS 1 MAHONEY; SOURCE 3 ORGANISM_TAXID: 12081; SOURCE 4 MOL_ID: 2; SOURCE 5 ORGANISM_SCIENTIFIC: POLIOVIRUS TYPE 3 (STRAINS P3/LEON/37 AND SOURCE 6 P3/LEON 12A[1]B); SOURCE 7 ORGANISM_TAXID: 12088; SOURCE 8 MOL_ID: 3; SOURCE 9 ORGANISM_SCIENTIFIC: HUMAN POLIOVIRUS 1; SOURCE 10 ORGANISM_TAXID: 12080; SOURCE 11 MOL_ID: 4; SOURCE 12 ORGANISM_SCIENTIFIC: HUMAN POLIOVIRUS 1 MAHONEY; SOURCE 13 ORGANISM_TAXID: 12081; SOURCE 14 MOL_ID: 5; SOURCE 15 ORGANISM_SCIENTIFIC: HUMAN POLIOVIRUS 1; SOURCE 16 ORGANISM_TAXID: 12080 KEYWDS PICORNAVIRUS, POLIOVIRUS, INTERMEDIATE, RNA RELEASE, 80S, ATP- KEYWDS 2 BINDING, CAPSID PROTEIN, COVALENT PROTEIN-RNA LINKAGE, CYTOPLASMIC KEYWDS 3 VESICLE, HELICASE, HOST-VIRUS INTERACTION, HYDROLASE, LIPOPROTEIN, KEYWDS 4 MEMBRANE, MYRISTATE, NUCLEOTIDE-BINDING, NUCLEOTIDYLTRANSFERASE, KEYWDS 5 PHOSPHOPROTEIN, PROTEASE, RNA REPLICATION, RNA-BINDING, RNA-DIRECTED KEYWDS 6 RNA POLYMERASE, THIOL PROTEASE, TRANSFERASE, VIRION, VIRAL PROTEIN EXPDTA ELECTRON MICROSCOPY MDLTYP CA ATOMS ONLY, CHAIN 1, 2, 3, 4, 7 AUTHOR H.C.LEVY,M.BOSTINA,D.J.FILMAN,J.M.HOGLE REVDAT 6 21-FEB-24 3IYB 1 REMARK REVDAT 5 18-JUL-18 3IYB 1 REMARK REVDAT 4 09-NOV-16 3IYB 1 SCALE REVDAT 3 28-JAN-15 3IYB 1 DBREF VERSN REVDAT 2 28-APR-10 3IYB 1 JRNL REVDAT 1 16-MAR-10 3IYB 0 JRNL AUTH H.C.LEVY,M.BOSTINA,D.J.FILMAN,J.M.HOGLE JRNL TITL CATCHING A VIRUS IN THE ACT OF RNA RELEASE: A NOVEL JRNL TITL 2 POLIOVIRUS UNCOATING INTERMEDIATE CHARACTERIZED BY JRNL TITL 3 CRYO-ELECTRON MICROSCOPY. JRNL REF J.VIROL. V. 84 4426 2010 JRNL REFN ISSN 0022-538X JRNL PMID 20181687 JRNL DOI 10.1128/JVI.02393-09 REMARK 2 REMARK 2 RESOLUTION. 10.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : INSOUT, EM3DR, PFT REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 1POV REMARK 3 REFINEMENT SPACE : RECIPROCAL REMARK 3 REFINEMENT PROTOCOL : RIGID BODY FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : REFINEMENT PROTOCOL--RIGID BODY REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 10.00 REMARK 3 NUMBER OF PARTICLES : NULL REMARK 3 CTF CORRECTION METHOD : NULL REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: DETAILS ABOUT THE PARTICLE: 10,000 PARTICLE WERE REMARK 3 PARTITIONED INTO TWO DISTINCT CLASSES REMARK 4 REMARK 4 3IYB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-JUL-09. REMARK 100 THE DEPOSITION ID IS D_1000160017. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : VITREOUS ICE (CRYO EM) REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : 80S POLIOVIRUS REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 0.20 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : 20MM TRIS PH 7.4, 2MM CACL2, REMARK 245 20MM NACL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : 60 PROMOTERS ARRANGED AS A REMARK 245 ICOSAHEDRON. NATIVE VIRUS HEAT-TREATED AT 56 DEGREES C REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TECNAI F30 REMARK 245 DETECTOR TYPE : KODAK SO-163 FILM REMARK 245 MINIMUM DEFOCUS (NM) : 0.90 REMARK 245 MAXIMUM DEFOCUS (NM) : 3.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : 0.00 REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : 0.00 REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : OTHER REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 1500.00 REMARK 245 ILLUMINATION MODE : OTHER REMARK 245 NOMINAL MAGNIFICATION : 59000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 200 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 ICOSAHEDRAL POINT SYMMETRY (SCHOENFLIES SYMBOL = I). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: 1, 2, 3, 4, 7 REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT2 2 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT3 2 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT1 3 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT2 3 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT3 3 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT1 4 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 4 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT3 4 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT1 5 0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 5 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT3 5 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 7 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 7 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 7 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT1 8 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 8 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 8 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT1 9 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT2 9 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 9 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT1 10 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT2 10 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 10 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 11 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 12 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 12 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT3 12 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 13 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 13 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT3 13 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 14 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT2 14 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT3 14 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 15 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT2 15 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT3 15 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 16 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 16 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 16 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 17 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT2 17 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 17 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 18 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT2 18 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 18 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 19 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 19 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 19 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 20 0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 20 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 20 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 21 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 21 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 21 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 22 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT2 22 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT3 22 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT1 23 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT2 23 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT3 23 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT1 24 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT2 24 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 24 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT1 25 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT2 25 0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 25 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT1 26 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 26 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 26 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 27 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT2 27 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 27 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 28 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT2 28 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 28 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 29 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT2 29 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT3 29 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 30 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT2 30 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT3 30 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 31 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 31 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 31 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 32 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 32 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 32 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT1 33 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 33 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 33 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT1 34 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 34 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT3 34 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT1 35 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 35 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT3 35 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT1 36 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 36 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 36 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 37 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 37 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT3 37 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 38 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 38 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT3 38 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 39 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 39 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 39 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 40 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 40 0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 40 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 41 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 41 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 41 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 42 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT2 42 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT3 42 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT1 43 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT2 43 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT3 43 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT1 44 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT2 44 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT3 44 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 45 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT2 45 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT3 45 0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 46 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 46 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 46 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 47 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 47 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT3 47 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 48 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 48 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT3 48 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 49 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 49 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT3 49 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT1 50 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 50 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT3 50 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT1 51 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 51 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 51 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 52 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT2 52 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 52 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 53 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT2 53 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 53 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 54 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT2 54 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 54 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT1 55 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT2 55 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 55 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT1 56 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 56 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 56 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 57 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 57 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 57 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT1 58 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 58 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 58 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT1 59 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 59 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 59 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 60 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 60 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 60 0.309017 0.809017 -0.500000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER 4 114 REMARK 465 GLU 4 115 REMARK 465 ALA 4 116 REMARK 465 ASN 4 117 REMARK 465 PRO 4 118 REMARK 465 VAL 4 119 REMARK 465 ASP 4 120 REMARK 465 GLN 4 121 REMARK 465 PRO 4 122 REMARK 465 THR 4 123 REMARK 465 GLU 4 124 REMARK 465 PRO 4 125 REMARK 465 ASP 4 126 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CA ASP 1 288 CA ASN 4 206 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-5123 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-5122 RELATED DB: EMDB REMARK 900 RELATED ID: 3IYC RELATED DB: PDB DBREF 3IYB 1 68 302 UNP P03300 POLG_POL1M 647 881 DBREF 3IYB 2 83 96 UNP P03302 POLG_POL3L 83 96 DBREF 3IYB 3 1 231 UNP Q9E912 Q9E912_9ENTO 342 572 DBREF 3IYB 4 97 341 UNP P03300 POLG_POL1M 97 341 DBREF 3IYB 7 42 52 PDB 3IYB 3IYB 42 52 SEQRES 1 1 235 GLN HIS ARG SER ARG SER GLU SER SER ILE GLU SER PHE SEQRES 2 1 235 PHE ALA ARG GLY ALA CYS VAL THR ILE MET THR VAL ASP SEQRES 3 1 235 ASN PRO ALA SER THR THR ASN LYS ASP LYS LEU PHE ALA SEQRES 4 1 235 VAL TRP LYS ILE THR TYR LYS ASP THR VAL GLN LEU ARG SEQRES 5 1 235 ARG LYS LEU GLU PHE PHE THR TYR SER ARG PHE ASP MET SEQRES 6 1 235 GLU LEU THR PHE VAL VAL THR ALA ASN PHE THR GLU THR SEQRES 7 1 235 ASN ASN GLY HIS ALA LEU ASN GLN VAL TYR GLN ILE MET SEQRES 8 1 235 TYR VAL PRO PRO GLY ALA PRO VAL PRO GLU LYS TRP ASP SEQRES 9 1 235 ASP TYR THR TRP GLN THR SER SER ASN PRO SER ILE PHE SEQRES 10 1 235 TYR THR TYR GLY THR ALA PRO ALA ARG ILE SER VAL PRO SEQRES 11 1 235 TYR VAL GLY ILE SER ASN ALA TYR SER HIS PHE TYR ASP SEQRES 12 1 235 GLY PHE SER LYS VAL PRO LEU LYS ASP GLN SER ALA ALA SEQRES 13 1 235 LEU GLY ASP SER LEU TYR GLY ALA ALA SER LEU ASN ASP SEQRES 14 1 235 PHE GLY ILE LEU ALA VAL ARG VAL VAL ASN ASP HIS ASN SEQRES 15 1 235 PRO THR LYS VAL THR SER LYS ILE ARG VAL TYR LEU LYS SEQRES 16 1 235 PRO LYS HIS ILE ARG VAL TRP CYS PRO ARG PRO PRO ARG SEQRES 17 1 235 ALA VAL ALA TYR TYR GLY PRO GLY VAL ASP TYR LYS ASP SEQRES 18 1 235 GLY THR LEU THR PRO LEU SER THR LYS ASP LEU THR THR SEQRES 19 1 235 TYR SEQRES 1 2 14 LEU GLN LEU THR LEU GLY ASN SER THR ILE THR THR GLN SEQRES 2 2 14 GLU SEQRES 1 3 231 GLY LEU PRO VAL MET ASN THR PRO GLY SER ASN GLN TYR SEQRES 2 3 231 LEU THR ALA ASP ASN PHE GLN SER PRO CYS ALA LEU PRO SEQRES 3 3 231 GLU PHE ASP VAL THR PRO PRO ILE ASP ILE PRO GLY GLU SEQRES 4 3 231 VAL LYS ASN MET MET GLU LEU ALA GLU ILE ASP THR MET SEQRES 5 3 231 ILE PRO PHE ASP LEU SER ALA THR LYS LYS ASN THR MET SEQRES 6 3 231 GLU MET TYR ARG VAL ARG LEU SER ASP LYS PRO HIS THR SEQRES 7 3 231 ASP ASP PRO ILE LEU CYS LEU SER LEU SER PRO ALA SER SEQRES 8 3 231 ASP PRO ARG LEU SER HIS THR MET LEU GLY GLU ILE LEU SEQRES 9 3 231 ASN TYR TYR THR HIS TRP ALA GLY SER LEU LYS PHE THR SEQRES 10 3 231 PHE LEU PHE CYS GLY SER MET MET ALA THR GLY LYS LEU SEQRES 11 3 231 LEU VAL SER TYR ALA PRO PRO GLY ALA ASP PRO PRO LYS SEQRES 12 3 231 LYS ARG LYS GLU ALA MET LEU GLY THR HIS VAL ILE TRP SEQRES 13 3 231 ASP ILE GLY LEU GLN SER SER CYS THR MET VAL VAL PRO SEQRES 14 3 231 TRP ILE SER ASN THR THR TYR ARG GLN THR ILE ASP ASP SEQRES 15 3 231 SER PHE THR GLU GLY GLY TYR ILE SER VAL PHE TYR GLN SEQRES 16 3 231 THR ARG ILE VAL VAL PRO LEU SER THR PRO ARG GLU MET SEQRES 17 3 231 ASP ILE LEU GLY PHE VAL SER ALA CYS ASN ASP PHE SER SEQRES 18 3 231 VAL ARG LEU LEU ARG ASP THR THR HIS ILE SEQRES 1 4 245 ALA ALA ASN SER VAL VAL ALA TYR GLY ARG TRP PRO GLU SEQRES 2 4 245 TYR LEU ARG ASP SER GLU ALA ASN PRO VAL ASP GLN PRO SEQRES 3 4 245 THR GLU PRO ASP VAL ALA ALA CYS ARG PHE TYR THR LEU SEQRES 4 4 245 ASP THR VAL SER TRP THR LYS GLU SER ARG GLY TRP TRP SEQRES 5 4 245 TRP LYS LEU PRO ASP ALA LEU ARG ASP MET GLY LEU PHE SEQRES 6 4 245 GLY GLN ASN MET TYR TYR HIS TYR LEU GLY ARG SER GLY SEQRES 7 4 245 TYR THR VAL HIS VAL GLN CYS ASN ALA SER LYS PHE HIS SEQRES 8 4 245 GLN GLY ALA LEU GLY VAL PHE ALA VAL PRO GLU MET CYS SEQRES 9 4 245 LEU ALA GLY ASP SER ASN THR THR THR MET HIS THR SER SEQRES 10 4 245 TYR GLN ASN ALA ASN PRO GLY GLU LYS GLY GLY THR PHE SEQRES 11 4 245 THR GLY THR PHE THR PRO ASP ASN ASN GLN THR SER PRO SEQRES 12 4 245 ALA ARG ARG PHE CYS PRO VAL ASP TYR LEU LEU GLY ASN SEQRES 13 4 245 GLY THR LEU LEU GLY ASN ALA PHE VAL PHE PRO HIS GLN SEQRES 14 4 245 ILE ILE ASN LEU ARG THR ASN ASN CYS ALA THR LEU VAL SEQRES 15 4 245 LEU PRO TYR VAL ASN SER LEU SER ILE ASP SER MET VAL SEQRES 16 4 245 LYS HIS ASN ASN TRP GLY ILE ALA ILE LEU PRO LEU ALA SEQRES 17 4 245 PRO LEU ASN PHE ALA SER GLU SER SER PRO GLU ILE PRO SEQRES 18 4 245 ILE THR LEU THR ILE ALA PRO MET CYS CYS GLU PHE ASN SEQRES 19 4 245 GLY LEU ARG ASN ILE THR LEU PRO ARG LEU GLN SEQRES 1 7 11 UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000