HEADER STRUCTURAL PROTEIN 03-OCT-13 3J4S TITLE HELICAL MODEL OF TUBZ-BT FOUR-STRANDED FILAMENT COMPND MOL_ID: 1; COMPND 2 MOLECULE: FTSZ/TUBULIN-RELATED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: TUBZ-BT; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS THURINGIENSIS; SOURCE 3 ORGANISM_TAXID: 1430; SOURCE 4 STRAIN: SEROVAR ISRAELENSIS; SOURCE 5 GENE: PBT156; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)STAR; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: MODIFIED PET151TOPOD KEYWDS FTSZ-LIKE, TUBULIN-LIKE, GTPASE, STRUCTURAL PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR E.A.MONTABANA,D.A.AGARD REVDAT 5 28-FEB-24 3J4S 1 REMARK REVDAT 4 18-JUL-18 3J4S 1 REMARK REVDAT 3 19-MAR-14 3J4S 1 JRNL REVDAT 2 05-MAR-14 3J4S 1 JRNL REVDAT 1 19-FEB-14 3J4S 0 JRNL AUTH E.A.MONTABANA,D.A.AGARD JRNL TITL BACTERIAL TUBULIN TUBZ-BT TRANSITIONS BETWEEN A TWO-STRANDED JRNL TITL 2 INTERMEDIATE AND A FOUR-STRANDED FILAMENT UPON GTP JRNL TITL 3 HYDROLYSIS. JRNL REF PROC.NATL.ACAD.SCI.USA V. 111 3407 2014 JRNL REFN ISSN 0027-8424 JRNL PMID 24550513 JRNL DOI 10.1073/PNAS.1318339111 REMARK 2 REMARK 2 RESOLUTION. 6.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : MDFF, SPIDER REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 2XKA REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : DETAILS--INITIAL LOCAL FITTING WAS DONE USING REMARK 3 CHIMERA AND THEN MOLECULAR DYNAMICS FLEXIBLE FITTING (MDFF) WAS REMARK 3 USED FOR FLEXIBLE FITTING. REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 6.800 REMARK 3 NUMBER OF PARTICLES : NULL REMARK 3 CTF CORRECTION METHOD : NULL REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: FINAL MAP HAS BEEN LOW-PASS FILTERED TO 7 ANGSTROM REMARK 3 AND HIGH-PASS FILTERED TO 30 ANGSTROM. A B-FACTOR OF -309 REMARK 3 ANGSTROM WAS APPLIED USING THE PROGRAM BFACTOR. A CYLINDRICAL REMARK 3 MASK OF RADIUS ~80 ANGSTROM HAS BEEN APPLIED. REMARK 4 REMARK 4 3J4S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-OCT-13. REMARK 100 THE DEPOSITION ID IS D_1000160250. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : HELICAL REMARK 245 SPECIMEN TYPE : VITREOUS ICE (CRYO EM) REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : FILAMENT REMARK 245 PARTICLE TYPE : HELICAL REMARK 245 NAME OF SAMPLE : TUBZ-BT REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : 400 MESH COPPER GRID WITH HOLEY REMARK 245 CARBON SUPPORT, GLOW DISCHARGED REMARK 245 SAMPLE VITRIFICATION DETAILS : ADD GTP TO GROW FILAMENTS FOR 6 REMARK 245 MINUTES BEFORE APPLICATION TO REMARK 245 GRID. BLOT 4.5 SECONDS BEFORE REMARK 245 PLUNGING INTO LIQUID ETHANE REMARK 245 (FEI VITROBOT MARK III). REMARK 245 SAMPLE BUFFER : HMK100 REMARK 245 PH : 7.70 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : 22-APR-11 REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TECNAI F20 REMARK 245 DETECTOR TYPE : TVIPS TEMCAM-F816 (8K X 8K) REMARK 245 MINIMUM DEFOCUS (NM) : 800.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 3500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.20 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 2000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 62000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 200 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 HELICAL SYMMETRY WITH THE FOLLOWING PARAMETERS: REMARK 300 ROTATION PER SUBUNIT (TWIST) = 31.79 DEGREES REMARK 300 RISE PER SUBUNIT (HEIGHT) = 43.55 ANGSTROMS REMARK 300 IN ADDITION, THERE IS 4-FOLD CIRCULAR REMARK 300 SYMMETRY AROUND THE HELIX AXIS REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 5 0.849999 -0.526784 0.000000 0.00000 REMARK 350 BIOMT2 5 0.526784 0.849999 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 1.000000 43.54512 REMARK 350 BIOMT1 6 -0.526784 -0.849999 0.000000 0.00000 REMARK 350 BIOMT2 6 0.849999 -0.526784 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 1.000000 43.54512 REMARK 350 BIOMT1 7 -0.849999 0.526784 0.000000 0.00000 REMARK 350 BIOMT2 7 -0.526784 -0.849999 0.000000 0.00000 REMARK 350 BIOMT3 7 0.000000 0.000000 1.000000 43.54512 REMARK 350 BIOMT1 8 0.526784 0.849999 0.000000 0.00000 REMARK 350 BIOMT2 8 -0.849999 0.526784 0.000000 0.00000 REMARK 350 BIOMT3 8 0.000000 0.000000 1.000000 43.54512 REMARK 350 BIOMT1 9 0.444997 -0.895532 0.000000 0.00000 REMARK 350 BIOMT2 9 0.895532 0.444997 0.000000 0.00000 REMARK 350 BIOMT3 9 0.000000 0.000000 1.000000 87.09024 REMARK 350 BIOMT1 10 -0.895532 -0.444997 0.000000 0.00000 REMARK 350 BIOMT2 10 0.444997 -0.895532 0.000000 0.00000 REMARK 350 BIOMT3 10 0.000000 0.000000 1.000000 87.09024 REMARK 350 BIOMT1 11 -0.444997 0.895532 0.000000 0.00000 REMARK 350 BIOMT2 11 -0.895532 -0.444997 0.000000 0.00000 REMARK 350 BIOMT3 11 0.000000 0.000000 1.000000 87.09024 REMARK 350 BIOMT1 12 0.895532 0.444997 0.000000 0.00000 REMARK 350 BIOMT2 12 -0.444997 0.895532 0.000000 0.00000 REMARK 350 BIOMT3 12 0.000000 0.000000 1.000000 87.09024 REMARK 350 BIOMT1 13 -0.093505 -0.995619 0.000000 0.00000 REMARK 350 BIOMT2 13 0.995619 -0.093505 0.000000 0.00000 REMARK 350 BIOMT3 13 0.000000 0.000000 1.000000 130.63536 REMARK 350 BIOMT1 14 -0.995619 0.093505 0.000000 0.00000 REMARK 350 BIOMT2 14 -0.093505 -0.995619 0.000000 0.00000 REMARK 350 BIOMT3 14 0.000000 0.000000 1.000000 130.63536 REMARK 350 BIOMT1 15 0.093505 0.995619 0.000000 0.00000 REMARK 350 BIOMT2 15 -0.995619 0.093505 0.000000 0.00000 REMARK 350 BIOMT3 15 0.000000 0.000000 1.000000 130.63536 REMARK 350 BIOMT1 16 0.995619 -0.093505 0.000000 0.00000 REMARK 350 BIOMT2 16 0.093505 0.995619 0.000000 0.00000 REMARK 350 BIOMT3 16 0.000000 0.000000 1.000000 130.63536 REMARK 350 BIOMT1 17 -0.603956 -0.797018 0.000000 0.00000 REMARK 350 BIOMT2 17 0.797018 -0.603956 0.000000 0.00000 REMARK 350 BIOMT3 17 0.000000 0.000000 1.000000 174.18048 REMARK 350 BIOMT1 18 -0.797018 0.603956 0.000000 0.00000 REMARK 350 BIOMT2 18 -0.603956 -0.797018 0.000000 0.00000 REMARK 350 BIOMT3 18 0.000000 0.000000 1.000000 174.18048 REMARK 350 BIOMT1 19 0.603956 0.797018 0.000000 0.00000 REMARK 350 BIOMT2 19 -0.797018 0.603956 0.000000 0.00000 REMARK 350 BIOMT3 19 0.000000 0.000000 1.000000 174.18048 REMARK 350 BIOMT1 20 0.797018 -0.603956 0.000000 0.00000 REMARK 350 BIOMT2 20 0.603956 0.797018 0.000000 0.00000 REMARK 350 BIOMT3 20 0.000000 0.000000 1.000000 174.18048 REMARK 350 BIOMT1 21 -0.933218 -0.359310 0.000000 0.00000 REMARK 350 BIOMT2 21 0.359310 -0.933218 0.000000 0.00000 REMARK 350 BIOMT3 21 0.000000 0.000000 1.000000 217.72560 REMARK 350 BIOMT1 22 -0.359310 0.933218 0.000000 0.00000 REMARK 350 BIOMT2 22 -0.933218 -0.359310 0.000000 0.00000 REMARK 350 BIOMT3 22 0.000000 0.000000 1.000000 217.72560 REMARK 350 BIOMT1 23 0.933218 0.359310 0.000000 0.00000 REMARK 350 BIOMT2 23 -0.359310 0.933218 0.000000 0.00000 REMARK 350 BIOMT3 23 0.000000 0.000000 1.000000 217.72560 REMARK 350 BIOMT1 24 0.359310 -0.933218 0.000000 0.00000 REMARK 350 BIOMT2 24 0.933218 0.359310 0.000000 0.00000 REMARK 350 BIOMT3 24 0.000000 0.000000 1.000000 217.72560 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 415 REMARK 465 ASP A 416 REMARK 465 ILE A 417 REMARK 465 SER A 418 REMARK 465 PHE A 419 REMARK 465 ALA A 420 REMARK 465 THR A 421 REMARK 465 ASN A 422 REMARK 465 ARG A 423 REMARK 465 VAL A 424 REMARK 465 GLN A 425 REMARK 465 LYS A 426 REMARK 465 ASN A 427 REMARK 465 THR A 428 REMARK 465 PHE A 429 REMARK 465 ASN A 430 REMARK 465 PRO A 431 REMARK 465 TYR A 432 REMARK 465 ASN A 433 REMARK 465 LYS A 434 REMARK 465 ASN A 435 REMARK 465 GLN A 436 REMARK 465 GLY A 437 REMARK 465 PHE A 438 REMARK 465 GLY A 439 REMARK 465 GLY A 440 REMARK 465 ALA A 441 REMARK 465 SER A 442 REMARK 465 ARG A 443 REMARK 465 PHE A 444 REMARK 465 SER A 445 REMARK 465 GLY A 446 REMARK 465 GLY A 447 REMARK 465 LYS A 448 REMARK 465 ASN A 449 REMARK 465 SER A 450 REMARK 465 ALA A 451 REMARK 465 PHE A 452 REMARK 465 LYS A 453 REMARK 465 ARG A 454 REMARK 465 GLN A 455 REMARK 465 THR A 456 REMARK 465 SER A 457 REMARK 465 GLU A 458 REMARK 465 ALA A 459 REMARK 465 THR A 460 REMARK 465 SER A 461 REMARK 465 THR A 462 REMARK 465 GLN A 463 REMARK 465 ASN A 464 REMARK 465 GLN A 465 REMARK 465 GLN A 466 REMARK 465 GLU A 467 REMARK 465 GLU A 468 REMARK 465 GLU A 469 REMARK 465 ASN A 470 REMARK 465 ILE A 471 REMARK 465 ILE A 472 REMARK 465 SER A 473 REMARK 465 THR A 474 REMARK 465 LEU A 475 REMARK 465 LYS A 476 REMARK 465 THR A 477 REMARK 465 SER A 478 REMARK 465 ASN A 479 REMARK 465 PRO A 480 REMARK 465 PHE A 481 REMARK 465 LYS A 482 REMARK 465 LYS A 483 REMARK 465 ARG A 484 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PRO A 328 CA PRO A 328 C -0.126 REMARK 500 ASN A 338 CA ASN A 338 C -0.174 REMARK 500 ASN A 341 CA ASN A 341 C -0.168 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TRP A 25 CA - CB - CG ANGL. DEV. = -13.4 DEGREES REMARK 500 CYS A 52 CB - CA - C ANGL. DEV. = 10.2 DEGREES REMARK 500 CYS A 52 CA - CB - SG ANGL. DEV. = -12.0 DEGREES REMARK 500 CYS A 160 N - CA - CB ANGL. DEV. = 9.6 DEGREES REMARK 500 MET A 190 CB - CA - C ANGL. DEV. = -12.4 DEGREES REMARK 500 TYR A 258 CA - CB - CG ANGL. DEV. = -14.3 DEGREES REMARK 500 PHE A 280 CB - CG - CD2 ANGL. DEV. = -6.8 DEGREES REMARK 500 PHE A 280 CB - CG - CD1 ANGL. DEV. = 7.4 DEGREES REMARK 500 GLU A 306 N - CA - C ANGL. DEV. = -19.1 DEGREES REMARK 500 PHE A 315 CB - CG - CD2 ANGL. DEV. = -4.2 DEGREES REMARK 500 ASP A 332 C - N - CA ANGL. DEV. = 16.5 DEGREES REMARK 500 PHE A 333 N - CA - CB ANGL. DEV. = -12.1 DEGREES REMARK 500 ASN A 338 CA - CB - CG ANGL. DEV. = -15.9 DEGREES REMARK 500 TYR A 350 CA - CB - CG ANGL. DEV. = -12.4 DEGREES REMARK 500 MET A 379 CG - SD - CE ANGL. DEV. = -10.3 DEGREES REMARK 500 TYR A 385 CB - CG - CD2 ANGL. DEV. = -5.2 DEGREES REMARK 500 TYR A 385 CB - CG - CD1 ANGL. DEV. = 3.9 DEGREES REMARK 500 GLU A 391 N - CA - CB ANGL. DEV. = -15.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 4 31.70 177.16 REMARK 500 HIS A 16 21.88 -150.47 REMARK 500 VAL A 18 98.34 -66.62 REMARK 500 ASN A 19 15.54 -148.55 REMARK 500 SER A 22 -60.29 -91.65 REMARK 500 PHE A 46 -167.85 -102.47 REMARK 500 ASN A 48 15.48 158.85 REMARK 500 THR A 51 156.79 -36.16 REMARK 500 CYS A 52 -81.05 -103.31 REMARK 500 ASP A 64 -11.47 -46.01 REMARK 500 ASN A 70 -20.03 -153.48 REMARK 500 ASN A 121 -83.18 -114.97 REMARK 500 GLU A 122 22.10 -168.67 REMARK 500 PRO A 169 -153.40 -71.33 REMARK 500 ASP A 172 102.12 71.75 REMARK 500 PHE A 197 -168.24 -115.04 REMARK 500 ASN A 207 167.83 176.33 REMARK 500 LYS A 224 -176.55 59.85 REMARK 500 ARG A 232 21.95 -73.99 REMARK 500 TYR A 233 17.99 -155.83 REMARK 500 ASN A 262 -153.44 -143.02 REMARK 500 ARG A 279 -150.93 -139.96 REMARK 500 ALA A 311 10.54 -151.87 REMARK 500 THR A 319 -6.61 -141.40 REMARK 500 ALA A 331 79.29 -108.33 REMARK 500 LYS A 351 149.13 158.31 REMARK 500 ASP A 362 50.92 -146.23 REMARK 500 MET A 381 128.66 68.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 76 0.12 SIDE CHAIN REMARK 500 ARG A 154 0.10 SIDE CHAIN REMARK 500 PHE A 197 0.11 SIDE CHAIN REMARK 500 TYR A 233 0.06 SIDE CHAIN REMARK 500 PHE A 280 0.08 SIDE CHAIN REMARK 500 ARG A 287 0.10 SIDE CHAIN REMARK 500 PHE A 315 0.08 SIDE CHAIN REMARK 500 TYR A 373 0.12 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 HIS A 313 11.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP A 900 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-5762 RELATED DB: EMDB REMARK 900 CRYO-EM MAP OF FOUR-STRANDED TUBZ-BT FILAMENT REMARK 900 RELATED ID: EMD-5763 RELATED DB: EMDB REMARK 900 CRYO-EM MAP OF TWO-STRANDED TUBZ-BT FILAMENT DBREF 3J4S A 1 484 UNP Q8KNP3 Q8KNP3_BACTI 1 484 SEQRES 1 A 484 MET LEU LEU ASN SER ASN GLU LEU GLU HIS ILE HIS SER SEQRES 2 A 484 THR ASN HIS SER VAL ASN ASP ILE SER ILE ARG TRP GLY SEQRES 3 A 484 VAL ILE GLY ALA GLY GLN LYS GLY ASN LYS GLU ALA ASP SEQRES 4 A 484 LEU PHE ALA GLY TYR LYS PHE SER ASN GLY THR THR CYS SEQRES 5 A 484 TYR PRO THR LEU ALA VAL ASN PHE ALA GLU SER ASP MET SEQRES 6 A 484 MET HIS LEU GLN ASN ILE ILE LYS GLU ASP ARG ILE HIS SEQRES 7 A 484 PHE ASP GLY LEU LYS GLY ALA ALA ARG THR PRO SER VAL SEQRES 8 A 484 VAL THR ASP LEU PHE ASP PRO GLU THR ASN PRO ASN ALA SEQRES 9 A 484 ASN GLY TYR LEU ASP LYS LEU ALA GLN GLU LEU GLY ARG SEQRES 10 A 484 LYS PHE THR ASN GLU GLU GLY GLU VAL ILE VAL ASP GLN SEQRES 11 A 484 PHE LEU ILE CYS LEU GLY ALA GLY GLY GLY VAL GLY THR SEQRES 12 A 484 GLY TRP GLY SER LEU VAL LEU GLN LEU ILE ARG GLU GLN SEQRES 13 A 484 PHE PHE PRO CYS PRO VAL SER MET LEU ILE SER LEU PRO SEQRES 14 A 484 SER GLY ASP PRO ASP GLU ILE ASN ASN ALA LEU VAL LEU SEQRES 15 A 484 LEU SER GLU ILE ASP GLU PHE MET ARG GLU GLN ASP ARG SEQRES 16 A 484 LEU PHE GLY ASN SER ASP ILE LYS PRO LEU ALA ASN VAL SEQRES 17 A 484 ILE VAL ASN ASP ASN THR GLN MET GLN ARG ILE ILE GLU SEQRES 18 A 484 SER GLN LYS GLY THR LYS ASP LEU LYS ASN ARG TYR VAL SEQRES 19 A 484 ASN TRP LYS GLU VAL ALA ASN ASP ASN VAL VAL SER THR SEQRES 20 A 484 LEU HIS GLU ILE ASN ILE ILE PRO GLU ASN TYR GLY SER SEQRES 21 A 484 ASP ASN VAL THR TYR ASP PRO SER ASP LEU ILE LYS LEU SEQRES 22 A 484 LEU SER ILE PRO GLY ARG PHE LEU THR ILE GLY LYS ALA SEQRES 23 A 484 ARG ILE ALA LYS PHE ASP LEU HIS SER LEU GLU ASN SER SEQRES 24 A 484 ILE LYS ARG SER LEU ASP GLU GLY PHE PHE SER ALA GLU SEQRES 25 A 484 HIS GLN PHE GLU THR ALA THR MET TYR GLY GLY PHE VAL SEQRES 26 A 484 LEU ARG PRO SER ASN ALA ASP PHE PHE LYS ASP VAL ASN SEQRES 27 A 484 THR GLU ASN ARG ILE ARG ASN THR LEU GLY GLU TYR LYS SEQRES 28 A 484 ARG LEU ASP GLU ILE ALA GLY LYS PHE GLY ASP PRO ILE SEQRES 29 A 484 TRP ASP ASN GLU TYR ALA VAL CYS TYR THR ILE PHE ALA SEQRES 30 A 484 GLY MET THR MET PRO LYS ARG TYR ILE SER LEU ALA ARG SEQRES 31 A 484 GLU GLY LYS GLU LEU ALA GLU LYS GLN GLU GLN LEU ARG SEQRES 32 A 484 ALA GLU ALA GLN ARG LYS GLN ASP GLU GLU LYS VAL ASP SEQRES 33 A 484 ILE SER PHE ALA THR ASN ARG VAL GLN LYS ASN THR PHE SEQRES 34 A 484 ASN PRO TYR ASN LYS ASN GLN GLY PHE GLY GLY ALA SER SEQRES 35 A 484 ARG PHE SER GLY GLY LYS ASN SER ALA PHE LYS ARG GLN SEQRES 36 A 484 THR SER GLU ALA THR SER THR GLN ASN GLN GLN GLU GLU SEQRES 37 A 484 GLU ASN ILE ILE SER THR LEU LYS THR SER ASN PRO PHE SEQRES 38 A 484 LYS LYS ARG HET GDP A 900 28 HETNAM GDP GUANOSINE-5'-DIPHOSPHATE FORMUL 2 GDP C10 H15 N5 O11 P2 HELIX 1 1 SER A 5 ASN A 15 1 11 HELIX 2 2 GLY A 31 GLY A 43 1 13 HELIX 3 3 GLU A 62 MET A 66 5 5 HELIX 4 4 ILE A 72 GLU A 74 5 3 HELIX 5 5 PRO A 89 PHE A 96 1 8 HELIX 6 6 ASN A 103 THR A 120 1 18 HELIX 7 7 GLY A 139 GLU A 155 1 17 HELIX 8 8 ASP A 172 PHE A 197 1 26 HELIX 9 9 ASN A 213 GLN A 223 1 11 HELIX 10 10 LYS A 230 VAL A 234 5 5 HELIX 11 11 ASN A 235 TYR A 258 1 24 HELIX 12 12 ASP A 266 ILE A 276 1 11 HELIX 13 13 ASP A 292 GLU A 306 1 15 HELIX 14 14 GLN A 314 ALA A 318 5 5 HELIX 15 15 ALA A 331 LYS A 335 5 5 HELIX 16 16 VAL A 337 GLU A 349 1 13 HELIX 17 17 TYR A 350 LYS A 351 5 2 HELIX 18 18 ARG A 352 ILE A 356 5 5 HELIX 19 19 LYS A 383 GLU A 413 1 31 SHEET 1 A10 ARG A 76 ILE A 77 0 SHEET 2 A10 THR A 55 VAL A 58 1 N ALA A 57 O ILE A 77 SHEET 3 A10 TRP A 25 ALA A 30 1 N VAL A 27 O LEU A 56 SHEET 4 A10 GLN A 130 GLY A 136 1 O LEU A 132 N GLY A 26 SHEET 5 A10 VAL A 162 LEU A 168 1 O LEU A 165 N LEU A 135 SHEET 6 A10 LEU A 205 ASP A 212 1 O ASN A 211 N LEU A 168 SHEET 7 A10 PHE A 280 ILE A 288 1 O LEU A 281 N VAL A 208 SHEET 8 A10 ALA A 370 MET A 379 -1 O ALA A 370 N ILE A 288 SHEET 9 A10 MET A 320 PRO A 328 -1 N PHE A 324 O TYR A 373 SHEET 10 A10 ALA A 357 GLY A 358 1 O ALA A 357 N TYR A 321 SHEET 1 B10 ARG A 76 ILE A 77 0 SHEET 2 B10 THR A 55 VAL A 58 1 N ALA A 57 O ILE A 77 SHEET 3 B10 TRP A 25 ALA A 30 1 N VAL A 27 O LEU A 56 SHEET 4 B10 GLN A 130 GLY A 136 1 O LEU A 132 N GLY A 26 SHEET 5 B10 VAL A 162 LEU A 168 1 O LEU A 165 N LEU A 135 SHEET 6 B10 LEU A 205 ASP A 212 1 O ASN A 211 N LEU A 168 SHEET 7 B10 PHE A 280 ILE A 288 1 O LEU A 281 N VAL A 208 SHEET 8 B10 ALA A 370 MET A 379 -1 O ALA A 370 N ILE A 288 SHEET 9 B10 MET A 320 PRO A 328 -1 N PHE A 324 O TYR A 373 SHEET 10 B10 ILE A 364 TRP A 365 1 O TRP A 365 N ARG A 327 SITE 1 AC1 12 GLY A 31 GLN A 32 LYS A 33 LYS A 36 SITE 2 AC1 12 ARG A 87 GLY A 136 ALA A 137 GLY A 139 SITE 3 AC1 12 GLY A 140 VAL A 141 TRP A 236 LYS A 237 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000