HEADER HYDROLASE/IMMUNE SYSTEM 26-MAY-15 3JAB TITLE DOMAIN ORGANIZATION AND CONFORMATIONAL PLASTICITY OF THE G PROTEIN TITLE 2 EFFECTOR, PDE6 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GAFA DOMAIN OF CONE PHOSPHODIESTERASE 6C; COMPND 3 CHAIN: A, M; COMPND 4 FRAGMENT: SEE REMARK 999; COMPND 5 SYNONYM: CONE CGMP-SPECIFIC 3',5'-CYCLIC PHOSPHODIESTERASE SUBUNIT COMPND 6 ALPHA'; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: GAFB DOMAIN OF PHOSPHODIESTERASE 2A; COMPND 9 CHAIN: B, N; COMPND 10 FRAGMENT: SEE REMARK 999; COMPND 11 SYNONYM: CGMP-DEPENDENT 3',5'-CYCLIC PHOSPHODIESTERASE; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: PHOSPHODIESTERASE 5/6 CHIMERA CATALYTIC DOMAIN; COMPND 14 CHAIN: C, O; COMPND 15 FRAGMENT: SEE REMARK 999; COMPND 16 SYNONYM: CGMP-SPECIFIC 3',5'-CYCLIC PHOSPHODIESTERASE, CONE CGMP- COMPND 17 SPECIFIC 3',5'-CYCLIC PHOSPHODIESTERASE SUBUNIT ALPHA' CHIMERA; COMPND 18 MOL_ID: 4; COMPND 19 MOLECULE: PHOSPHODIESTERASE 6 GAMMA SUBUNIT INHIBITORY PEPTIDE; COMPND 20 CHAIN: D, P; COMPND 21 FRAGMENT: UNP RESIDUES 70-87; COMPND 22 SYNONYM: RETINAL ROD RHODOPSIN-SENSITIVE CGMP 3',5'-CYCLIC COMPND 23 PHOSPHODIESTERASE SUBUNIT GAMMA, GMP-PDE GAMMA; COMPND 24 MOL_ID: 5; COMPND 25 MOLECULE: IGG1-KAPPA 2E8 LIGHT CHAIN; COMPND 26 CHAIN: L, R; COMPND 27 FRAGMENT: FAB; COMPND 28 MOL_ID: 6; COMPND 29 MOLECULE: IGG1-KAPPA 2E8 HEAVY CHAIN; COMPND 30 CHAIN: H, Q; COMPND 31 FRAGMENT: FAB SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: BOVINE; SOURCE 4 ORGANISM_TAXID: 9913; SOURCE 5 TISSUE: RETINA; SOURCE 6 CELL: PHOTORECEPTOR; SOURCE 7 ORGANELLE: OUTER SEGMENT; SOURCE 8 CELLULAR_LOCATION: DISK MEMBRANE; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 11 ORGANISM_COMMON: BOVINE; SOURCE 12 ORGANISM_TAXID: 9913; SOURCE 13 TISSUE: RETINA; SOURCE 14 CELL: PHOTORECEPTOR; SOURCE 15 ORGANELLE: OUTER SEGMENT; SOURCE 16 CELLULAR_LOCATION: DISK MEMBRANE; SOURCE 17 MOL_ID: 3; SOURCE 18 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 19 ORGANISM_COMMON: BOVINE; SOURCE 20 ORGANISM_TAXID: 9913; SOURCE 21 TISSUE: RETINA; SOURCE 22 CELL: PHOTORECEPTOR; SOURCE 23 ORGANELLE: OUTER SEGMENT; SOURCE 24 CELLULAR_LOCATION: DISK MEMBRANE; SOURCE 25 MOL_ID: 4; SOURCE 26 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 27 ORGANISM_COMMON: BOVINE; SOURCE 28 ORGANISM_TAXID: 9913; SOURCE 29 TISSUE: RETINA; SOURCE 30 CELL: PHOTORECEPTOR; SOURCE 31 ORGANELLE: OUTER SEGMENT; SOURCE 32 CELLULAR_LOCATION: DISK MEMBRANE; SOURCE 33 MOL_ID: 5; SOURCE 34 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 35 ORGANISM_COMMON: MOUSE; SOURCE 36 ORGANISM_TAXID: 10090; SOURCE 37 TISSUE: ASCITES FLUID; SOURCE 38 MOL_ID: 6; SOURCE 39 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 40 ORGANISM_COMMON: MOUSE; SOURCE 41 ORGANISM_TAXID: 10090; SOURCE 42 TISSUE: ASCITES FLUID KEYWDS PHOSPHODIESTERASE, PHOTORECEPTOR, HYDROLASE-IMMUNE SYSTEM COMPLEX EXPDTA ELECTRON MICROSCOPY AUTHOR Z.ZHANG,F.HE,R.CONSTANTINE,M.L.BAKER,W.BAEHR,M.F.SCHMID,T.G.WENSEL, AUTHOR 2 M.A.AGOSTO REVDAT 2 18-JUL-18 3JAB 1 REMARK REVDAT 1 10-JUN-15 3JAB 0 JRNL AUTH Z.ZHANG,F.HE,R.CONSTANTINE,M.L.BAKER,W.BAEHR,M.F.SCHMID, JRNL AUTH 2 T.G.WENSEL,M.A.AGOSTO JRNL TITL DOMAIN ORGANIZATION AND CONFORMATIONAL PLASTICITY OF THE G JRNL TITL 2 PROTEIN EFFECTOR, PDE6. JRNL REF J.BIOL.CHEM. V. 290 12833 2015 JRNL REFN ISSN 0021-9258 JRNL PMID 25809480 JRNL DOI 10.1074/JBC.M115.647636 REMARK 2 REMARK 2 RESOLUTION. 11.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : UCSF CHIMERA, EMAN REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 3DBA REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : RIGID BODY FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : REFINEMENT PROTOCOL--RIGID BODY DETAILS- REMARK 3 -DOMAINS WERE SEPARATELY FITTED BY MANUAL DOCKING AND FIT IN MAP REMARK 3 IN CHIMERA. THE FITTING OF GFA(A,B) WAS CONFIRMED USING REMARK 3 FOLDERHUNTER. REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : 1.810 REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 11.00 REMARK 3 NUMBER OF PARTICLES : 12373 REMARK 3 CTF CORRECTION METHOD : NULL REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: A TOTAL OF 21,100 PARTICLES WERE PICKED FROM ICE REMARK 3 IMAGES AND CTF CORRECTED USING CTFIT. AFTER AN INITIAL 3D MODEL REMARK 3 WAS GENERATED AS DESCRIBED FOR PDE6, THREE NOISE-SEEDED MODELS REMARK 3 WERE GENERATED AND USED AS INITIAL MODELS IN THE MULTIREFINE REMARK 3 PROCEDURE. A MODEL WITH TWO ROS-1 FAB BOUND WITH A POPULATION OF REMARK 3 ~15,000 PARTICLES EMERGED AND WAS SUBJECTED TO FURTHER REMARK 3 REFINEMENT USING STANDARD ITERATIVE PROJECTION MATCHING, CLASS REMARK 3 AVERAGING, AND FOURIER RECONSTRUCTION. THE FINAL 3D MAPS WITH C2 REMARK 3 SYMMETRY WERE GENERATED FROM 12,373 PARTICLES. REMARK 4 REMARK 4 3JAB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-MAY-15. REMARK 100 THE DEPOSITION ID IS D_1000160449. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : VITREOUS ICE (CRYO EM) REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : BOVINE ROD PDE6 HOLOENZYME IN REMARK 245 COMPLEX WITH THE FAB FRAGMENT REMARK 245 FROM THE ROS-1 MONOCLONAL REMARK 245 ANTIBODY; ROD CGMP-SPECIFIC 3', REMARK 245 5'-CYCLIC PHOSPHODIESTERASE; REMARK 245 MONOCLONAL ANTIBODY FAB REMARK 245 FRAGMENT OF ROS-1 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 0.50 REMARK 245 SAMPLE SUPPORT DETAILS : 400 MESH GLOW-DISCHARGED REMARK 245 QUANTIFOIL GRIDS WITH 2.0 A REMARK 245 HOLES REMARK 245 SAMPLE VITRIFICATION DETAILS : APPLIED 3 UL SAMPLE PER GRID REMARK 245 AND BLOTTED FOR 1 SECOND BEFORE REMARK 245 PLUNGING INTO LIQUID ETHANE REMARK 245 (FEI VITROBOT MARK III). REMARK 245 SAMPLE BUFFER : 20 MM SODIUM PHOSPHATE, 150 MM REMARK 245 SODIUM CHLORIDE REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : TWO FAB MOLECULES BIND TO PDE6 REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : 08-AUG-11 REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : JEOL 2010F REMARK 245 DETECTOR TYPE : GATAN ULTRASCAN 4000 (4K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : NULL REMARK 245 MAXIMUM DEFOCUS (NM) : NULL REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.00 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 15.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 60000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 200 REMARK 245 IMAGING DETAILS : PARALLEL BEAM ILLUMINATION REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DODECAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, M, B, N, C, D, O, P, L, H, REMARK 350 AND CHAINS: R, Q REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 54 REMARK 465 LEU A 226 REMARK 465 GLU A 227 REMARK 465 HIS A 228 REMARK 465 HIS A 229 REMARK 465 HIS A 230 REMARK 465 HIS A 231 REMARK 465 HIS A 232 REMARK 465 HIS A 233 REMARK 465 MET M 54 REMARK 465 LEU M 226 REMARK 465 GLU M 227 REMARK 465 HIS M 228 REMARK 465 HIS M 229 REMARK 465 HIS M 230 REMARK 465 HIS M 231 REMARK 465 HIS M 232 REMARK 465 HIS M 233 REMARK 465 PHE B 445 REMARK 465 ASP B 446 REMARK 465 GLY B 447 REMARK 465 GLY B 448 REMARK 465 VAL B 449 REMARK 465 VAL B 450 REMARK 465 ASP B 451 REMARK 465 ASP B 452 REMARK 465 GLU B 453 REMARK 465 ALA B 483 REMARK 465 HIS B 484 REMARK 465 PRO B 485 REMARK 465 LEU B 486 REMARK 465 PHE B 487 REMARK 465 TYR B 488 REMARK 465 ARG B 489 REMARK 465 GLY B 490 REMARK 465 VAL B 491 REMARK 465 ASP B 492 REMARK 465 ASP B 493 REMARK 465 SER B 494 REMARK 465 THR B 495 REMARK 465 GLY B 496 REMARK 465 PHE B 497 REMARK 465 PHE N 445 REMARK 465 ASP N 446 REMARK 465 GLY N 447 REMARK 465 GLY N 448 REMARK 465 VAL N 449 REMARK 465 VAL N 450 REMARK 465 ASP N 451 REMARK 465 ASP N 452 REMARK 465 GLU N 453 REMARK 465 ALA N 483 REMARK 465 HIS N 484 REMARK 465 PRO N 485 REMARK 465 LEU N 486 REMARK 465 PHE N 487 REMARK 465 TYR N 488 REMARK 465 ARG N 489 REMARK 465 GLY N 490 REMARK 465 VAL N 491 REMARK 465 ASP N 492 REMARK 465 ASP N 493 REMARK 465 SER N 494 REMARK 465 THR N 495 REMARK 465 GLY N 496 REMARK 465 PHE N 497 REMARK 465 GLY C 531 REMARK 465 GLN C 860 REMARK 465 TRP D 70 REMARK 465 GLY O 531 REMARK 465 GLN O 860 REMARK 465 TRP P 70 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE2 GLN A 70 CA LYS B 390 0.20 REMARK 500 O THR C 833 OE2 GLU O 837 0.25 REMARK 500 OE2 GLU C 837 O THR O 833 0.25 REMARK 500 CG GLN M 70 C LEU N 389 0.28 REMARK 500 OE2 GLU A 72 CD GLU B 392 0.42 REMARK 500 C GLU C 837 O GLU O 837 0.42 REMARK 500 O GLU C 837 C GLU O 837 0.42 REMARK 500 CG GLN A 70 C LEU B 389 0.49 REMARK 500 NE2 GLN M 70 CA LYS N 390 0.56 REMARK 500 ND1 HIS B 565 OE1 GLN O 552 0.58 REMARK 500 CB ASN A 60 O THR M 120 0.60 REMARK 500 O THR A 120 CB ASN M 60 0.60 REMARK 500 OE2 GLU M 72 CD GLU N 392 0.64 REMARK 500 OE2 GLU M 72 OE1 GLU N 392 0.66 REMARK 500 CE1 HIS N 565 OE1 GLN C 552 0.66 REMARK 500 CG HIS N 565 NE2 GLN C 552 0.69 REMARK 500 ND1 HIS N 565 CD GLN C 552 0.71 REMARK 500 CG MET B 571 CG MET N 571 0.74 REMARK 500 CB ASN A 60 C THR M 120 0.76 REMARK 500 C THR A 120 CB ASN M 60 0.76 REMARK 500 CD GLN B 561 CD GLN N 561 0.77 REMARK 500 O SER C 836 OE1 GLU O 837 0.85 REMARK 500 OE1 GLU C 837 O SER O 836 0.85 REMARK 500 CD GLU A 68 OE2 GLU M 68 0.86 REMARK 500 OE2 GLU A 68 CD GLU M 68 0.86 REMARK 500 CE MET N 570 CB SER O 560 0.90 REMARK 500 CB HIS B 565 NE2 GLN O 552 0.91 REMARK 500 OD2 ASP C 838 CB PHE O 840 0.92 REMARK 500 CB PHE C 840 OD2 ASP O 838 0.92 REMARK 500 OE1 GLN A 89 OE1 GLN M 89 0.93 REMARK 500 O THR A 120 CG ASN M 60 0.94 REMARK 500 CG ASN A 60 O THR M 120 0.94 REMARK 500 OE1 GLU A 68 OE2 GLU M 68 0.97 REMARK 500 OE2 GLU A 68 OE1 GLU M 68 0.97 REMARK 500 CB MET B 571 SD MET N 571 0.98 REMARK 500 O THR M 67 NZ LYS B 390 0.99 REMARK 500 SD MET B 571 CB MET N 571 1.00 REMARK 500 OE1 GLN B 561 CG GLN N 561 1.02 REMARK 500 ND1 HIS N 565 OE1 GLN C 552 1.02 REMARK 500 CD GLU A 72 OE1 GLU B 392 1.05 REMARK 500 CB GLN A 70 CA LEU B 389 1.05 REMARK 500 CG GLN B 561 OE1 GLN N 561 1.06 REMARK 500 CD GLU M 72 OE1 GLU N 392 1.07 REMARK 500 CD GLU A 72 CD GLU B 392 1.08 REMARK 500 OE2 GLU A 72 OE1 GLU B 392 1.10 REMARK 500 CG HIS B 565 NE2 GLN O 552 1.11 REMARK 500 O GLN A 89 O GLN M 89 1.11 REMARK 500 CE1 HIS B 565 OE1 GLN O 552 1.12 REMARK 500 ND1 HIS B 565 CD GLN O 552 1.13 REMARK 500 CE MET B 570 CB SER C 560 1.14 REMARK 500 REMARK 500 THIS ENTRY HAS 322 CLOSE CONTACTS REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 479 C - N - CA ANGL. DEV. = 12.8 DEGREES REMARK 500 PRO B 479 C - N - CD ANGL. DEV. = -22.9 DEGREES REMARK 500 PRO N 479 C - N - CA ANGL. DEV. = 12.8 DEGREES REMARK 500 PRO N 479 C - N - CD ANGL. DEV. = -22.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 56 -76.81 -28.73 REMARK 500 ASP A 71 84.15 -55.90 REMARK 500 GLU A 72 -81.71 -150.05 REMARK 500 ALA A 73 -130.07 -78.33 REMARK 500 ARG A 113 -59.55 -146.49 REMARK 500 HIS A 163 -44.93 92.15 REMARK 500 ASN A 198 84.47 51.48 REMARK 500 ALA A 202 161.57 178.61 REMARK 500 LEU A 224 42.43 -73.81 REMARK 500 LEU M 56 -76.81 -28.73 REMARK 500 ASP M 71 84.15 -55.90 REMARK 500 GLU M 72 -81.71 -150.05 REMARK 500 ALA M 73 -130.07 -78.33 REMARK 500 ARG M 113 -59.55 -146.49 REMARK 500 HIS M 163 -44.93 92.15 REMARK 500 ASN M 198 84.47 51.48 REMARK 500 ALA M 202 161.57 178.61 REMARK 500 LEU M 224 42.43 -73.81 REMARK 500 THR B 419 -72.10 -50.72 REMARK 500 ASN B 426 54.98 76.50 REMARK 500 ASP B 436 75.46 -117.08 REMARK 500 GLN B 437 -92.60 77.09 REMARK 500 ILE B 459 158.36 168.81 REMARK 500 ILE B 475 167.46 -40.53 REMARK 500 THR B 499 -162.55 -56.75 REMARK 500 ARG B 500 -98.84 153.67 REMARK 500 ILE B 507 -51.30 -120.35 REMARK 500 LYS B 508 146.38 50.09 REMARK 500 ASN B 509 -167.59 -103.44 REMARK 500 GLU B 510 -35.64 -38.62 REMARK 500 ASN B 511 -77.48 -82.12 REMARK 500 GLN B 512 19.96 169.34 REMARK 500 ASN B 522 124.79 58.37 REMARK 500 TRP B 528 -140.20 -163.81 REMARK 500 LYS B 531 2.91 -61.64 REMARK 500 GLU B 534 -51.26 -177.53 REMARK 500 THR N 419 -72.01 -50.77 REMARK 500 ASN N 426 55.02 76.43 REMARK 500 ASP N 436 75.43 -117.06 REMARK 500 GLN N 437 -92.58 77.08 REMARK 500 ILE N 459 158.35 168.82 REMARK 500 ILE N 475 167.42 -40.53 REMARK 500 THR N 499 -162.62 -56.69 REMARK 500 ARG N 500 -98.79 153.68 REMARK 500 ILE N 507 -51.36 -120.30 REMARK 500 LYS N 508 146.37 50.10 REMARK 500 ASN N 509 -167.58 -103.45 REMARK 500 GLU N 510 -35.65 -38.62 REMARK 500 ASN N 511 -77.43 -82.18 REMARK 500 GLN N 512 19.92 169.36 REMARK 500 REMARK 500 THIS ENTRY HAS 94 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IBM C 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IBM C 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IBM O 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IBM O 902 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-6258 RELATED DB: EMDB REMARK 900 CRYO-ELECTRON MICROSCOPY RECONSTRUCTION OF BOVINE ROD PDE6 REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE IMAGED PDE6 WAS DERIVED FROM BOS TAURUS, BUT SOME MODELED REMARK 999 SEQUENCES ARE FROM HOMO SAPIENS (CHAINS B, C, N, O) OR GALLUS REMARK 999 GALLUS (CHAINS A, M). THE PHOSPHODIESTERASE 2A STRUCTURE WAS REMARK 999 DETERMINED WITH FULL-LENGTH PROTEIN, BUT ONLY RESIDUES 387-571 WERE REMARK 999 USED IN THE FITTED MODEL (CHAINS B, N). DBREF 3JAB D 70 87 UNP P04972 CNRG_BOVIN 70 87 DBREF 3JAB P 70 87 UNP P04972 CNRG_BOVIN 70 87 DBREF 3JAB A 54 233 PDB 3JAB 3JAB 54 233 DBREF 3JAB M 54 233 PDB 3JAB 3JAB 54 233 DBREF 3JAB B 387 571 PDB 3JAB 3JAB 387 571 DBREF 3JAB N 387 571 PDB 3JAB 3JAB 387 571 DBREF 3JAB C 531 860 PDB 3JAB 3JAB 531 860 DBREF 3JAB O 531 860 PDB 3JAB 3JAB 531 860 DBREF 3JAB H 1 214 PDB 3JAB 3JAB 1 214 DBREF 3JAB Q 1 214 PDB 3JAB 3JAB 1 214 DBREF 3JAB L 1 214 PDB 3JAB 3JAB 1 214 DBREF 3JAB R 1 214 PDB 3JAB 3JAB 1 214 SEQRES 1 A 180 MET ARG LEU GLU GLU CYS ASN ILE LEU PHE GLU LEU LEU SEQRES 2 A 180 THR GLU ILE GLN ASP GLU ALA GLY SER MET GLU LYS ILE SEQRES 3 A 180 VAL HIS LYS THR LEU GLN ARG LEU SER GLN LEU LEU ALA SEQRES 4 A 180 ALA ASP ARG CYS SER MET PHE ILE CYS ARG SER ARG ASN SEQRES 5 A 180 GLY ILE PRO GLU VAL ALA THR ARG LEU LEU ASN VAL THR SEQRES 6 A 180 PRO THR SER LYS PHE GLU ASP ASN LEU VAL ASN PRO ASP SEQRES 7 A 180 LYS GLU THR VAL PHE PRO LEU ASP ILE GLY ILE ALA GLY SEQRES 8 A 180 TRP VAL ALA HIS THR LYS LYS PHE PHE ASN ILE PRO ASP SEQRES 9 A 180 VAL LYS LYS ASN ASN HIS PHE SER ASP TYR LEU ASP LYS SEQRES 10 A 180 LYS THR GLY TYR THR THR VAL ASN MET MET ALA ILE PRO SEQRES 11 A 180 ILE THR GLN GLY LYS GLU VAL LEU ALA VAL VAL MET ALA SEQRES 12 A 180 LEU ASN LYS LEU ASN ALA SER GLU PHE SER LYS GLU ASP SEQRES 13 A 180 GLU GLU VAL PHE LYS LYS TYR LEU ASN PHE ILE SER LEU SEQRES 14 A 180 VAL LEU ARG LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 M 180 MET ARG LEU GLU GLU CYS ASN ILE LEU PHE GLU LEU LEU SEQRES 2 M 180 THR GLU ILE GLN ASP GLU ALA GLY SER MET GLU LYS ILE SEQRES 3 M 180 VAL HIS LYS THR LEU GLN ARG LEU SER GLN LEU LEU ALA SEQRES 4 M 180 ALA ASP ARG CYS SER MET PHE ILE CYS ARG SER ARG ASN SEQRES 5 M 180 GLY ILE PRO GLU VAL ALA THR ARG LEU LEU ASN VAL THR SEQRES 6 M 180 PRO THR SER LYS PHE GLU ASP ASN LEU VAL ASN PRO ASP SEQRES 7 M 180 LYS GLU THR VAL PHE PRO LEU ASP ILE GLY ILE ALA GLY SEQRES 8 M 180 TRP VAL ALA HIS THR LYS LYS PHE PHE ASN ILE PRO ASP SEQRES 9 M 180 VAL LYS LYS ASN ASN HIS PHE SER ASP TYR LEU ASP LYS SEQRES 10 M 180 LYS THR GLY TYR THR THR VAL ASN MET MET ALA ILE PRO SEQRES 11 M 180 ILE THR GLN GLY LYS GLU VAL LEU ALA VAL VAL MET ALA SEQRES 12 M 180 LEU ASN LYS LEU ASN ALA SER GLU PHE SER LYS GLU ASP SEQRES 13 M 180 GLU GLU VAL PHE LYS LYS TYR LEU ASN PHE ILE SER LEU SEQRES 14 M 180 VAL LEU ARG LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 185 GLN LYS LEU LYS CYS GLU CYS GLN ALA LEU LEU GLN VAL SEQRES 2 B 185 ALA LYS ASN LEU PHE THR HIS LEU ASP ASP VAL SER VAL SEQRES 3 B 185 LEU LEU GLN GLU ILE ILE THR GLU ALA ARG ASN LEU SER SEQRES 4 B 185 ASN ALA GLU ILE CYS SER VAL PHE LEU LEU ASP GLN ASN SEQRES 5 B 185 GLU LEU VAL ALA LYS VAL PHE ASP GLY GLY VAL VAL ASP SEQRES 6 B 185 ASP GLU SER TYR GLU ILE ARG ILE PRO ALA ASP GLN GLY SEQRES 7 B 185 ILE ALA GLY HIS VAL ALA THR THR GLY GLN ILE LEU ASN SEQRES 8 B 185 ILE PRO ASP ALA TYR ALA HIS PRO LEU PHE TYR ARG GLY SEQRES 9 B 185 VAL ASP ASP SER THR GLY PHE ARG THR ARG ASN ILE LEU SEQRES 10 B 185 CYS PHE PRO ILE LYS ASN GLU ASN GLN GLU VAL ILE GLY SEQRES 11 B 185 VAL ALA GLU LEU VAL ASN LYS ILE ASN GLY PRO TRP PHE SEQRES 12 B 185 SER LYS PHE ASP GLU ASP LEU ALA THR ALA PHE SER ILE SEQRES 13 B 185 TYR CYS GLY ILE SER ILE ALA HIS SER LEU LEU TYR LYS SEQRES 14 B 185 LYS VAL ASN GLU ALA GLN TYR ARG SER HIS LEU ALA ASN SEQRES 15 B 185 GLU MET MET SEQRES 1 N 185 GLN LYS LEU LYS CYS GLU CYS GLN ALA LEU LEU GLN VAL SEQRES 2 N 185 ALA LYS ASN LEU PHE THR HIS LEU ASP ASP VAL SER VAL SEQRES 3 N 185 LEU LEU GLN GLU ILE ILE THR GLU ALA ARG ASN LEU SER SEQRES 4 N 185 ASN ALA GLU ILE CYS SER VAL PHE LEU LEU ASP GLN ASN SEQRES 5 N 185 GLU LEU VAL ALA LYS VAL PHE ASP GLY GLY VAL VAL ASP SEQRES 6 N 185 ASP GLU SER TYR GLU ILE ARG ILE PRO ALA ASP GLN GLY SEQRES 7 N 185 ILE ALA GLY HIS VAL ALA THR THR GLY GLN ILE LEU ASN SEQRES 8 N 185 ILE PRO ASP ALA TYR ALA HIS PRO LEU PHE TYR ARG GLY SEQRES 9 N 185 VAL ASP ASP SER THR GLY PHE ARG THR ARG ASN ILE LEU SEQRES 10 N 185 CYS PHE PRO ILE LYS ASN GLU ASN GLN GLU VAL ILE GLY SEQRES 11 N 185 VAL ALA GLU LEU VAL ASN LYS ILE ASN GLY PRO TRP PHE SEQRES 12 N 185 SER LYS PHE ASP GLU ASP LEU ALA THR ALA PHE SER ILE SEQRES 13 N 185 TYR CYS GLY ILE SER ILE ALA HIS SER LEU LEU TYR LYS SEQRES 14 N 185 LYS VAL ASN GLU ALA GLN TYR ARG SER HIS LEU ALA ASN SEQRES 15 N 185 GLU MET MET SEQRES 1 C 330 GLY SER HIS MET GLU GLU THR ARG GLU LEU GLN SER LEU SEQRES 2 C 330 ALA ALA ALA VAL VAL PRO SER ALA GLN THR LEU LYS ILE SEQRES 3 C 330 THR ASP PHE SER PHE SER ASP PHE GLU LEU SER ASP LEU SEQRES 4 C 330 GLU THR ALA LEU CYS THR ILE ARG MET PHE THR ASP LEU SEQRES 5 C 330 ASN LEU VAL GLN ASN PHE GLN MET LYS HIS GLU VAL LEU SEQRES 6 C 330 CYS ARG TRP ILE LEU SER VAL LYS LYS ASN TYR ARG LYS SEQRES 7 C 330 ASN VAL ALA TYR HIS ASN TRP ARG HIS ALA PHE ASN THR SEQRES 8 C 330 ALA GLN CYS MET PHE ALA ALA LEU LYS ALA GLY LYS ILE SEQRES 9 C 330 GLN ASN LYS LEU THR ASP LEU GLU ILE LEU ALA LEU LEU SEQRES 10 C 330 ILE ALA ALA LEU SER HIS ASP LEU ASP HIS ARG GLY VAL SEQRES 11 C 330 ASN ASN SER TYR ILE GLN ARG SER GLU HIS PRO LEU ALA SEQRES 12 C 330 GLN LEU TYR CYS HIS SER ILE MET GLU HIS HIS HIS PHE SEQRES 13 C 330 ASP GLN CYS LEU MET ILE LEU ASN SER PRO GLY ASN GLN SEQRES 14 C 330 ILE LEU SER GLY LEU SER ILE GLU GLU TYR LYS THR THR SEQRES 15 C 330 LEU LYS ILE ILE LYS GLN ALA ILE LEU ALA THR ASP LEU SEQRES 16 C 330 ALA LEU TYR ILE LYS ARG ARG GLY GLU PHE PHE GLU LEU SEQRES 17 C 330 ILE ARG LYS ASN GLN PHE ASN LEU GLU ASP PRO HIS GLN SEQRES 18 C 330 LYS GLU LEU PHE LEU ALA MET LEU MET THR ALA CYS ASP SEQRES 19 C 330 LEU SER ALA ILE THR LYS PRO TRP PRO ILE GLN GLN ARG SEQRES 20 C 330 ILE ALA GLU LEU VAL ALA THR GLU PHE TRP GLU GLN GLY SEQRES 21 C 330 ASP LEU GLU ARG THR VAL LEU GLN GLN GLN PRO ILE PRO SEQRES 22 C 330 MET MET ASP ARG ASN LYS ARG ASP GLU LEU PRO LYS LEU SEQRES 23 C 330 GLN VAL GLY PHE ILE ASP PHE VAL CYS THR GLN LEU TYR SEQRES 24 C 330 GLU ALA LEU THR HIS VAL SER GLU ASP CYS PHE PRO LEU SEQRES 25 C 330 LEU ASP GLY CYS ARG LYS ASN ARG GLN LYS TRP GLN ALA SEQRES 26 C 330 LEU ALA GLU GLN GLN SEQRES 1 D 18 TRP GLU ALA PHE ASN HIS LEU GLU LEU HIS GLU LEU ALA SEQRES 2 D 18 GLN TYR GLY ILE ILE SEQRES 1 O 330 GLY SER HIS MET GLU GLU THR ARG GLU LEU GLN SER LEU SEQRES 2 O 330 ALA ALA ALA VAL VAL PRO SER ALA GLN THR LEU LYS ILE SEQRES 3 O 330 THR ASP PHE SER PHE SER ASP PHE GLU LEU SER ASP LEU SEQRES 4 O 330 GLU THR ALA LEU CYS THR ILE ARG MET PHE THR ASP LEU SEQRES 5 O 330 ASN LEU VAL GLN ASN PHE GLN MET LYS HIS GLU VAL LEU SEQRES 6 O 330 CYS ARG TRP ILE LEU SER VAL LYS LYS ASN TYR ARG LYS SEQRES 7 O 330 ASN VAL ALA TYR HIS ASN TRP ARG HIS ALA PHE ASN THR SEQRES 8 O 330 ALA GLN CYS MET PHE ALA ALA LEU LYS ALA GLY LYS ILE SEQRES 9 O 330 GLN ASN LYS LEU THR ASP LEU GLU ILE LEU ALA LEU LEU SEQRES 10 O 330 ILE ALA ALA LEU SER HIS ASP LEU ASP HIS ARG GLY VAL SEQRES 11 O 330 ASN ASN SER TYR ILE GLN ARG SER GLU HIS PRO LEU ALA SEQRES 12 O 330 GLN LEU TYR CYS HIS SER ILE MET GLU HIS HIS HIS PHE SEQRES 13 O 330 ASP GLN CYS LEU MET ILE LEU ASN SER PRO GLY ASN GLN SEQRES 14 O 330 ILE LEU SER GLY LEU SER ILE GLU GLU TYR LYS THR THR SEQRES 15 O 330 LEU LYS ILE ILE LYS GLN ALA ILE LEU ALA THR ASP LEU SEQRES 16 O 330 ALA LEU TYR ILE LYS ARG ARG GLY GLU PHE PHE GLU LEU SEQRES 17 O 330 ILE ARG LYS ASN GLN PHE ASN LEU GLU ASP PRO HIS GLN SEQRES 18 O 330 LYS GLU LEU PHE LEU ALA MET LEU MET THR ALA CYS ASP SEQRES 19 O 330 LEU SER ALA ILE THR LYS PRO TRP PRO ILE GLN GLN ARG SEQRES 20 O 330 ILE ALA GLU LEU VAL ALA THR GLU PHE TRP GLU GLN GLY SEQRES 21 O 330 ASP LEU GLU ARG THR VAL LEU GLN GLN GLN PRO ILE PRO SEQRES 22 O 330 MET MET ASP ARG ASN LYS ARG ASP GLU LEU PRO LYS LEU SEQRES 23 O 330 GLN VAL GLY PHE ILE ASP PHE VAL CYS THR GLN LEU TYR SEQRES 24 O 330 GLU ALA LEU THR HIS VAL SER GLU ASP CYS PHE PRO LEU SEQRES 25 O 330 LEU ASP GLY CYS ARG LYS ASN ARG GLN LYS TRP GLN ALA SEQRES 26 O 330 LEU ALA GLU GLN GLN SEQRES 1 P 18 TRP GLU ALA PHE ASN HIS LEU GLU LEU HIS GLU LEU ALA SEQRES 2 P 18 GLN TYR GLY ILE ILE SEQRES 1 L 214 ASP ILE VAL MET THR GLN SER GLN LYS PHE MET SER THR SEQRES 2 L 214 SER VAL GLY ASP ARG VAL SER ILE THR CYS LYS ALA SER SEQRES 3 L 214 GLN ASN VAL GLY THR ALA VAL ALA TRP TYR GLN GLN LYS SEQRES 4 L 214 PRO GLY GLN SER PRO LYS LEU MET ILE TYR SER ALA SER SEQRES 5 L 214 ASN ARG TYR THR GLY VAL PRO ASP ARG PHE THR GLY SER SEQRES 6 L 214 GLY SER GLY THR ASP PHE THR LEU THR ILE SER ASN MET SEQRES 7 L 214 GLN SER GLU ASP LEU ALA ASP TYR PHE CYS GLN GLN TYR SEQRES 8 L 214 SER SER TYR PRO LEU THR PHE GLY ALA GLY THR LYS LEU SEQRES 9 L 214 GLU LEU LYS ARG ALA ASP ALA ALA PRO THR VAL SER ILE SEQRES 10 L 214 PHE PRO PRO SER SER GLU GLN LEU THR SER GLY GLY ALA SEQRES 11 L 214 SER VAL VAL CYS PHE LEU ASN ASN PHE TYR PRO LYS ASP SEQRES 12 L 214 ILE ASN VAL LYS TRP LYS ILE ASP GLY SER GLU ARG GLN SEQRES 13 L 214 ASN GLY VAL LEU ASN SER ALA THR ASP GLN ASP SER LYS SEQRES 14 L 214 ASP SER THR TYR SER MET SER SER THR LEU THR LEU THR SEQRES 15 L 214 LYS ASP GLU TYR GLU ARG HIS ASN SER TYR THR CYS GLU SEQRES 16 L 214 ALA THR HIS LYS THR SER THR SER PRO ILE VAL LYS SER SEQRES 17 L 214 PHE ASN ARG ASN GLU CYS SEQRES 1 H 221 GLU VAL GLN LEU GLN GLN SER GLY ALA GLU VAL VAL ARG SEQRES 2 H 221 SER GLY ALA SER VAL LYS LEU SER CYS THR ALA SER GLY SEQRES 3 H 221 PHE ASN ILE LYS ASP TYR TYR ILE HIS TRP VAL LYS GLN SEQRES 4 H 221 ARG PRO GLU LYS GLY LEU GLU TRP ILE GLY TRP ILE ASP SEQRES 5 H 221 PRO GLU ILE GLY ASP THR GLU TYR VAL PRO LYS PHE GLN SEQRES 6 H 221 GLY LYS ALA THR MET THR ALA ASP THR SER SER ASN THR SEQRES 7 H 221 ALA TYR LEU GLN LEU SER SER LEU THR SER GLU ASP THR SEQRES 8 H 221 ALA VAL TYR TYR CYS ASN ALA GLY HIS ASP TYR ASP ARG SEQRES 9 H 221 GLY ARG PHE PRO TYR TRP GLY GLN GLY THR LEU VAL THR SEQRES 10 H 221 VAL SER ALA ALA LYS THR THR PRO PRO SER VAL TYR PRO SEQRES 11 H 221 LEU ALA PRO GLY SER ALA ALA GLN THR ASN SER MET VAL SEQRES 12 H 221 THR LEU GLY CYS LEU VAL LYS GLY TYR PHE PRO GLU PRO SEQRES 13 H 221 VAL THR VAL THR TRP ASN SER GLY SER LEU SER SER GLY SEQRES 14 H 221 VAL HIS THR PHE PRO ALA VAL LEU GLN SER ASP LEU TYR SEQRES 15 H 221 THR LEU SER SER SER VAL THR VAL PRO SER SER THR TRP SEQRES 16 H 221 PRO SER GLU THR VAL THR CYS ASN VAL ALA HIS PRO ALA SEQRES 17 H 221 SER SER THR LYS VAL ASP LYS LYS ILE VAL PRO ARG ASP SEQRES 1 R 214 ASP ILE VAL MET THR GLN SER GLN LYS PHE MET SER THR SEQRES 2 R 214 SER VAL GLY ASP ARG VAL SER ILE THR CYS LYS ALA SER SEQRES 3 R 214 GLN ASN VAL GLY THR ALA VAL ALA TRP TYR GLN GLN LYS SEQRES 4 R 214 PRO GLY GLN SER PRO LYS LEU MET ILE TYR SER ALA SER SEQRES 5 R 214 ASN ARG TYR THR GLY VAL PRO ASP ARG PHE THR GLY SER SEQRES 6 R 214 GLY SER GLY THR ASP PHE THR LEU THR ILE SER ASN MET SEQRES 7 R 214 GLN SER GLU ASP LEU ALA ASP TYR PHE CYS GLN GLN TYR SEQRES 8 R 214 SER SER TYR PRO LEU THR PHE GLY ALA GLY THR LYS LEU SEQRES 9 R 214 GLU LEU LYS ARG ALA ASP ALA ALA PRO THR VAL SER ILE SEQRES 10 R 214 PHE PRO PRO SER SER GLU GLN LEU THR SER GLY GLY ALA SEQRES 11 R 214 SER VAL VAL CYS PHE LEU ASN ASN PHE TYR PRO LYS ASP SEQRES 12 R 214 ILE ASN VAL LYS TRP LYS ILE ASP GLY SER GLU ARG GLN SEQRES 13 R 214 ASN GLY VAL LEU ASN SER ALA THR ASP GLN ASP SER LYS SEQRES 14 R 214 ASP SER THR TYR SER MET SER SER THR LEU THR LEU THR SEQRES 15 R 214 LYS ASP GLU TYR GLU ARG HIS ASN SER TYR THR CYS GLU SEQRES 16 R 214 ALA THR HIS LYS THR SER THR SER PRO ILE VAL LYS SER SEQRES 17 R 214 PHE ASN ARG ASN GLU CYS SEQRES 1 Q 221 GLU VAL GLN LEU GLN GLN SER GLY ALA GLU VAL VAL ARG SEQRES 2 Q 221 SER GLY ALA SER VAL LYS LEU SER CYS THR ALA SER GLY SEQRES 3 Q 221 PHE ASN ILE LYS ASP TYR TYR ILE HIS TRP VAL LYS GLN SEQRES 4 Q 221 ARG PRO GLU LYS GLY LEU GLU TRP ILE GLY TRP ILE ASP SEQRES 5 Q 221 PRO GLU ILE GLY ASP THR GLU TYR VAL PRO LYS PHE GLN SEQRES 6 Q 221 GLY LYS ALA THR MET THR ALA ASP THR SER SER ASN THR SEQRES 7 Q 221 ALA TYR LEU GLN LEU SER SER LEU THR SER GLU ASP THR SEQRES 8 Q 221 ALA VAL TYR TYR CYS ASN ALA GLY HIS ASP TYR ASP ARG SEQRES 9 Q 221 GLY ARG PHE PRO TYR TRP GLY GLN GLY THR LEU VAL THR SEQRES 10 Q 221 VAL SER ALA ALA LYS THR THR PRO PRO SER VAL TYR PRO SEQRES 11 Q 221 LEU ALA PRO GLY SER ALA ALA GLN THR ASN SER MET VAL SEQRES 12 Q 221 THR LEU GLY CYS LEU VAL LYS GLY TYR PHE PRO GLU PRO SEQRES 13 Q 221 VAL THR VAL THR TRP ASN SER GLY SER LEU SER SER GLY SEQRES 14 Q 221 VAL HIS THR PHE PRO ALA VAL LEU GLN SER ASP LEU TYR SEQRES 15 Q 221 THR LEU SER SER SER VAL THR VAL PRO SER SER THR TRP SEQRES 16 Q 221 PRO SER GLU THR VAL THR CYS ASN VAL ALA HIS PRO ALA SEQRES 17 Q 221 SER SER THR LYS VAL ASP LYS LYS ILE VAL PRO ARG ASP HET IBM C 901 16 HET IBM C 902 16 HET IBM O 901 16 HET IBM O 902 16 HETNAM IBM 3-ISOBUTYL-1-METHYLXANTHINE FORMUL 13 IBM 4(C10 H14 N4 O2) HELIX 1 1 ARG A 55 THR A 67 1 13 HELIX 2 2 GLY A 74 ALA A 92 1 19 HELIX 3 3 LYS A 122 LEU A 127 1 6 HELIX 4 4 ASN A 129 GLU A 133 5 5 HELIX 5 5 GLY A 141 LYS A 150 1 10 HELIX 6 6 ASP A 157 ASN A 161 5 5 HELIX 7 7 ASP A 166 GLY A 173 1 8 HELIX 8 8 SER A 206 LEU A 224 1 19 HELIX 9 9 LEU M 56 THR M 67 1 12 HELIX 10 10 GLY M 74 ALA M 92 1 19 HELIX 11 11 LYS M 122 LEU M 127 1 6 HELIX 12 12 ASN M 129 GLU M 133 5 5 HELIX 13 13 GLY M 141 LYS M 150 1 10 HELIX 14 14 ASP M 157 ASN M 161 5 5 HELIX 15 15 ASP M 166 GLY M 173 1 8 HELIX 16 16 SER M 206 LEU M 224 1 19 HELIX 17 17 LYS B 390 PHE B 404 1 15 HELIX 18 18 THR B 405 LEU B 407 5 3 HELIX 19 19 ASP B 409 ASN B 426 1 18 HELIX 20 20 GLN B 463 GLY B 473 1 11 HELIX 21 21 GLU B 534 MET B 571 1 38 HELIX 22 22 LYS N 390 PHE N 404 1 15 HELIX 23 23 THR N 405 LEU N 407 5 3 HELIX 24 24 ASP N 409 ASN N 426 1 18 HELIX 25 25 GLN N 463 GLY N 473 1 11 HELIX 26 26 GLU N 534 MET N 571 1 38 HELIX 27 27 HIS C 533 ALA C 544 1 12 HELIX 28 28 SER C 550 LYS C 555 1 6 HELIX 29 29 SER C 567 LEU C 582 1 16 HELIX 30 30 ASN C 583 PHE C 588 1 6 HELIX 31 31 LYS C 591 ASN C 605 1 15 HELIX 32 32 ASN C 614 ALA C 631 1 18 HELIX 33 33 ILE C 634 LEU C 638 5 5 HELIX 34 34 THR C 639 HIS C 653 1 15 HELIX 35 35 ASN C 661 SER C 668 1 8 HELIX 36 36 HIS C 670 TYR C 676 1 7 HELIX 37 37 SER C 679 ASN C 694 1 16 HELIX 38 38 SER C 705 THR C 723 1 19 HELIX 39 39 ASP C 724 LYS C 741 1 18 HELIX 40 40 ASP C 748 LEU C 765 1 18 HELIX 41 41 SER C 766 LYS C 770 5 5 HELIX 42 42 PRO C 771 VAL C 796 1 26 HELIX 43 43 ILE C 802 ASP C 811 5 10 HELIX 44 44 GLU C 812 CYS C 825 1 14 HELIX 45 45 CYS C 825 SER C 836 1 12 HELIX 46 46 CYS C 839 GLU C 858 1 20 HELIX 47 47 GLU D 77 TYR D 84 1 8 HELIX 48 48 HIS O 533 ALA O 544 1 12 HELIX 49 49 SER O 550 LYS O 555 1 6 HELIX 50 50 SER O 567 LEU O 582 1 16 HELIX 51 51 ASN O 583 PHE O 588 1 6 HELIX 52 52 LYS O 591 ASN O 605 1 15 HELIX 53 53 ASN O 614 ALA O 631 1 18 HELIX 54 54 ILE O 634 LEU O 638 5 5 HELIX 55 55 THR O 639 HIS O 653 1 15 HELIX 56 56 ASN O 661 SER O 668 1 8 HELIX 57 57 HIS O 670 TYR O 676 1 7 HELIX 58 58 SER O 679 ASN O 694 1 16 HELIX 59 59 SER O 705 THR O 723 1 19 HELIX 60 60 ASP O 724 LYS O 741 1 18 HELIX 61 61 ASP O 748 LEU O 765 1 18 HELIX 62 62 SER O 766 LYS O 770 5 5 HELIX 63 63 PRO O 771 VAL O 796 1 26 HELIX 64 64 ILE O 802 ASP O 811 5 10 HELIX 65 65 GLU O 812 CYS O 825 1 14 HELIX 66 66 CYS O 825 SER O 836 1 12 HELIX 67 67 CYS O 839 GLU O 858 1 20 HELIX 68 68 GLU P 77 TYR P 84 1 8 HELIX 69 69 GLN L 79 LEU L 83 5 5 HELIX 70 70 SER L 121 THR L 126 1 6 HELIX 71 71 LYS L 183 GLU L 187 1 5 HELIX 72 72 ASN H 28 LYS H 30 5 3 HELIX 73 73 PRO H 61 GLN H 64 5 4 HELIX 74 74 THR H 83 THR H 87 5 5 HELIX 75 75 SER H 156 SER H 158 5 3 HELIX 76 76 PRO H 184 TRP H 188 5 5 HELIX 77 77 PRO H 200 SER H 203 5 4 HELIX 78 78 GLN R 79 LEU R 83 5 5 HELIX 79 79 SER R 121 THR R 126 1 6 HELIX 80 80 LYS R 183 GLU R 187 1 5 HELIX 81 81 ASN Q 28 LYS Q 30 5 3 HELIX 82 82 PRO Q 61 GLN Q 64 5 4 HELIX 83 83 THR Q 83 THR Q 87 5 5 HELIX 84 84 SER Q 156 SER Q 158 5 3 HELIX 85 85 PRO Q 184 TRP Q 188 5 5 HELIX 86 86 PRO Q 200 SER Q 203 5 4 SHEET 1 A 6 VAL A 135 PHE A 136 0 SHEET 2 A 6 ILE A 107 VAL A 117 -1 N VAL A 110 O PHE A 136 SHEET 3 A 6 ALA A 93 ARG A 104 -1 N ILE A 100 O ALA A 111 SHEET 4 A 6 GLU A 189 LYS A 199 -1 O LEU A 197 N ARG A 95 SHEET 5 A 6 MET A 179 GLN A 186 -1 N GLN A 186 O GLU A 189 SHEET 6 A 6 PHE A 153 ILE A 155 -1 N ILE A 155 O MET A 179 SHEET 1 B 6 VAL M 135 PHE M 136 0 SHEET 2 B 6 ILE M 107 VAL M 117 -1 N VAL M 110 O PHE M 136 SHEET 3 B 6 ALA M 93 ARG M 104 -1 N ILE M 100 O ALA M 111 SHEET 4 B 6 GLU M 189 LYS M 199 -1 O LEU M 197 N ARG M 95 SHEET 5 B 6 MET M 179 GLN M 186 -1 N GLN M 186 O GLU M 189 SHEET 6 B 6 PHE M 153 ILE M 155 -1 N ILE M 155 O MET M 179 SHEET 1 C 5 LEU B 440 VAL B 441 0 SHEET 2 C 5 ALA B 427 LEU B 435 -1 N LEU B 434 O VAL B 441 SHEET 3 C 5 GLY B 516 LYS B 523 -1 O VAL B 517 N PHE B 433 SHEET 4 C 5 ILE B 502 PRO B 506 -1 N LEU B 503 O LEU B 520 SHEET 5 C 5 LEU B 476 ILE B 478 -1 N LEU B 476 O CYS B 504 SHEET 1 D 5 LEU N 440 VAL N 441 0 SHEET 2 D 5 ALA N 427 LEU N 435 -1 N LEU N 434 O VAL N 441 SHEET 3 D 5 GLY N 516 LYS N 523 -1 O VAL N 517 N PHE N 433 SHEET 4 D 5 ILE N 502 PRO N 506 -1 N LEU N 503 O LEU N 520 SHEET 5 D 5 LEU N 476 ILE N 478 -1 N LEU N 476 O CYS N 504 SHEET 1 E 4 MET L 4 THR L 5 0 SHEET 2 E 4 VAL L 19 ALA L 25 -1 O LYS L 24 N THR L 5 SHEET 3 E 4 ASP L 70 ILE L 75 -1 O ILE L 75 N VAL L 19 SHEET 4 E 4 PHE L 62 SER L 67 -1 N THR L 63 O THR L 74 SHEET 1 F 6 PHE L 10 THR L 13 0 SHEET 2 F 6 THR L 102 LEU L 106 1 O GLU L 105 N THR L 13 SHEET 3 F 6 ASP L 85 GLN L 90 -1 N TYR L 86 O THR L 102 SHEET 4 F 6 VAL L 33 GLN L 38 -1 N GLN L 38 O ASP L 85 SHEET 5 F 6 LYS L 45 TYR L 49 -1 O MET L 47 N TRP L 35 SHEET 6 F 6 ASN L 53 ARG L 54 -1 O ASN L 53 N TYR L 49 SHEET 1 G 4 PHE L 10 THR L 13 0 SHEET 2 G 4 THR L 102 LEU L 106 1 O GLU L 105 N THR L 13 SHEET 3 G 4 ASP L 85 GLN L 90 -1 N TYR L 86 O THR L 102 SHEET 4 G 4 THR L 97 PHE L 98 -1 O THR L 97 N GLN L 90 SHEET 1 H 4 THR L 114 PHE L 118 0 SHEET 2 H 4 GLY L 129 PHE L 139 -1 O ASN L 137 N THR L 114 SHEET 3 H 4 TYR L 173 THR L 182 -1 O MET L 175 N LEU L 136 SHEET 4 H 4 VAL L 159 ALA L 163 -1 N SER L 162 O SER L 176 SHEET 1 I 4 SER L 153 GLU L 154 0 SHEET 2 I 4 ASN L 145 ILE L 150 -1 N ILE L 150 O SER L 153 SHEET 3 I 4 SER L 191 THR L 197 -1 O GLU L 195 N LYS L 147 SHEET 4 I 4 ILE L 205 ASN L 210 -1 O LYS L 207 N CYS L 194 SHEET 1 J 4 GLN H 3 GLN H 6 0 SHEET 2 J 4 VAL H 18 SER H 25 -1 O THR H 23 N GLN H 5 SHEET 3 J 4 THR H 77 LEU H 82 -1 O LEU H 80 N LEU H 20 SHEET 4 J 4 ALA H 67 ASP H 72 -1 N THR H 70 O TYR H 79 SHEET 1 K 6 GLU H 10 ARG H 13 0 SHEET 2 K 6 THR H 107 SER H 112 1 O THR H 110 N GLU H 10 SHEET 3 K 6 ALA H 88 HIS H 96 -1 N TYR H 90 O THR H 107 SHEET 4 K 6 TYR H 32 GLN H 39 -1 N TYR H 33 O GLY H 95 SHEET 5 K 6 LEU H 45 ILE H 51 -1 O GLU H 46 N LYS H 38 SHEET 6 K 6 THR H 57 TYR H 59 -1 O GLU H 58 N TRP H 50 SHEET 1 L 4 GLU H 10 ARG H 13 0 SHEET 2 L 4 THR H 107 SER H 112 1 O THR H 110 N GLU H 10 SHEET 3 L 4 ALA H 88 HIS H 96 -1 N TYR H 90 O THR H 107 SHEET 4 L 4 TYR H 102 TRP H 103 -1 O TYR H 102 N ALA H 94 SHEET 1 M 4 SER H 120 LEU H 124 0 SHEET 2 M 4 VAL H 136 TYR H 145 -1 O LEU H 141 N TYR H 122 SHEET 3 M 4 LEU H 174 VAL H 183 -1 O TYR H 175 N TYR H 145 SHEET 4 M 4 VAL H 163 THR H 165 -1 N HIS H 164 O SER H 180 SHEET 1 N 4 SER H 120 LEU H 124 0 SHEET 2 N 4 VAL H 136 TYR H 145 -1 O LEU H 141 N TYR H 122 SHEET 3 N 4 LEU H 174 VAL H 183 -1 O TYR H 175 N TYR H 145 SHEET 4 N 4 VAL H 169 GLN H 171 -1 N GLN H 171 O LEU H 174 SHEET 1 O 3 THR H 151 TRP H 154 0 SHEET 2 O 3 THR H 194 HIS H 199 -1 O ASN H 196 N THR H 153 SHEET 3 O 3 THR H 204 LYS H 209 -1 O VAL H 206 N VAL H 197 SHEET 1 P 4 MET R 4 THR R 5 0 SHEET 2 P 4 VAL R 19 ALA R 25 -1 O LYS R 24 N THR R 5 SHEET 3 P 4 ASP R 70 ILE R 75 -1 O ILE R 75 N VAL R 19 SHEET 4 P 4 PHE R 62 SER R 67 -1 N THR R 63 O THR R 74 SHEET 1 Q 6 PHE R 10 THR R 13 0 SHEET 2 Q 6 THR R 102 LEU R 106 1 O GLU R 105 N THR R 13 SHEET 3 Q 6 ASP R 85 GLN R 90 -1 N TYR R 86 O THR R 102 SHEET 4 Q 6 VAL R 33 GLN R 38 -1 N GLN R 38 O ASP R 85 SHEET 5 Q 6 LYS R 45 TYR R 49 -1 O MET R 47 N TRP R 35 SHEET 6 Q 6 ASN R 53 ARG R 54 -1 O ASN R 53 N TYR R 49 SHEET 1 R 4 PHE R 10 THR R 13 0 SHEET 2 R 4 THR R 102 LEU R 106 1 O GLU R 105 N THR R 13 SHEET 3 R 4 ASP R 85 GLN R 90 -1 N TYR R 86 O THR R 102 SHEET 4 R 4 THR R 97 PHE R 98 -1 O THR R 97 N GLN R 90 SHEET 1 S 4 THR R 114 PHE R 118 0 SHEET 2 S 4 GLY R 129 PHE R 139 -1 O ASN R 137 N THR R 114 SHEET 3 S 4 TYR R 173 THR R 182 -1 O MET R 175 N LEU R 136 SHEET 4 S 4 VAL R 159 ALA R 163 -1 N SER R 162 O SER R 176 SHEET 1 T 4 SER R 153 GLU R 154 0 SHEET 2 T 4 ASN R 145 ILE R 150 -1 N ILE R 150 O SER R 153 SHEET 3 T 4 SER R 191 THR R 197 -1 O GLU R 195 N LYS R 147 SHEET 4 T 4 ILE R 205 ASN R 210 -1 O LYS R 207 N CYS R 194 SHEET 1 U 4 GLN Q 3 GLN Q 6 0 SHEET 2 U 4 VAL Q 18 SER Q 25 -1 O THR Q 23 N GLN Q 5 SHEET 3 U 4 THR Q 77 LEU Q 82 -1 O LEU Q 80 N LEU Q 20 SHEET 4 U 4 ALA Q 67 ASP Q 72 -1 N THR Q 70 O TYR Q 79 SHEET 1 V 6 GLU Q 10 ARG Q 13 0 SHEET 2 V 6 THR Q 107 SER Q 112 1 O THR Q 110 N GLU Q 10 SHEET 3 V 6 ALA Q 88 HIS Q 96 -1 N TYR Q 90 O THR Q 107 SHEET 4 V 6 TYR Q 32 GLN Q 39 -1 N TYR Q 33 O GLY Q 95 SHEET 5 V 6 LEU Q 45 ILE Q 51 -1 O GLU Q 46 N LYS Q 38 SHEET 6 V 6 THR Q 57 TYR Q 59 -1 O GLU Q 58 N TRP Q 50 SHEET 1 W 4 GLU Q 10 ARG Q 13 0 SHEET 2 W 4 THR Q 107 SER Q 112 1 O THR Q 110 N GLU Q 10 SHEET 3 W 4 ALA Q 88 HIS Q 96 -1 N TYR Q 90 O THR Q 107 SHEET 4 W 4 TYR Q 102 TRP Q 103 -1 O TYR Q 102 N ALA Q 94 SHEET 1 X 4 SER Q 120 LEU Q 124 0 SHEET 2 X 4 VAL Q 136 TYR Q 145 -1 O LEU Q 141 N TYR Q 122 SHEET 3 X 4 LEU Q 174 VAL Q 183 -1 O TYR Q 175 N TYR Q 145 SHEET 4 X 4 VAL Q 163 THR Q 165 -1 N HIS Q 164 O SER Q 180 SHEET 1 Y 4 SER Q 120 LEU Q 124 0 SHEET 2 Y 4 VAL Q 136 TYR Q 145 -1 O LEU Q 141 N TYR Q 122 SHEET 3 Y 4 LEU Q 174 VAL Q 183 -1 O TYR Q 175 N TYR Q 145 SHEET 4 Y 4 VAL Q 169 GLN Q 171 -1 N GLN Q 171 O LEU Q 174 SHEET 1 Z 3 THR Q 151 TRP Q 154 0 SHEET 2 Z 3 THR Q 194 HIS Q 199 -1 O ASN Q 196 N THR Q 153 SHEET 3 Z 3 THR Q 204 LYS Q 209 -1 O VAL Q 206 N VAL Q 197 SSBOND 1 CYS L 23 CYS L 88 1555 1555 2.04 SSBOND 2 CYS L 134 CYS L 194 1555 1555 2.04 SSBOND 3 CYS H 22 CYS H 92 1555 1555 2.04 SSBOND 4 CYS H 140 CYS H 195 1555 1555 2.03 SSBOND 5 CYS R 23 CYS R 88 1555 1555 2.04 SSBOND 6 CYS R 134 CYS R 194 1555 1555 2.04 SSBOND 7 CYS Q 22 CYS Q 92 1555 1555 2.04 SSBOND 8 CYS Q 140 CYS Q 195 1555 1555 2.03 CISPEP 1 ALA A 73 GLY A 74 0 6.61 CISPEP 2 ALA M 73 GLY M 74 0 6.61 CISPEP 3 TYR L 94 PRO L 95 0 -4.93 CISPEP 4 TYR L 140 PRO L 141 0 0.95 CISPEP 5 PHE H 146 PRO H 147 0 -5.22 CISPEP 6 GLU H 148 PRO H 149 0 -5.61 CISPEP 7 TRP H 188 PRO H 189 0 18.98 CISPEP 8 TYR R 94 PRO R 95 0 -4.93 CISPEP 9 TYR R 140 PRO R 141 0 0.95 CISPEP 10 PHE Q 146 PRO Q 147 0 -5.22 CISPEP 11 GLU Q 148 PRO Q 149 0 -5.61 CISPEP 12 TRP Q 188 PRO Q 189 0 18.98 SITE 1 AC1 5 LEU C 765 VAL C 782 PHE C 786 GLN C 817 SITE 2 AC1 5 PHE C 820 SITE 1 AC2 6 GLN C 699 LEU C 701 SER C 702 LEU C 704 SITE 2 AC2 6 ILE C 706 TYR C 709 SITE 1 AC3 5 LEU O 765 VAL O 782 PHE O 786 GLN O 817 SITE 2 AC3 5 PHE O 820 SITE 1 AC4 6 GLN O 699 LEU O 701 SER O 702 LEU O 704 SITE 2 AC4 6 ILE O 706 TYR O 709 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000