HEADER RECOMBINATION/DNA 22-OCT-15 3JBY TITLE CRYO-ELECTRON MICROSCOPY STRUCTURE OF RAG PAIRED COMPLEX (C2 SYMMETRY) COMPND MOL_ID: 1; COMPND 2 MOLECULE: V(D)J RECOMBINATION-ACTIVATING PROTEIN 1; COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: RAG-1, ENDONUCLEASE RAG1, E3 UBIQUITIN-PROTEIN LIGASE RAG1; COMPND 5 EC: 3.1.-.-, 6.3.2.-; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: V(D)J RECOMBINATION-ACTIVATING PROTEIN 2; COMPND 9 CHAIN: B, D; COMPND 10 SYNONYM: RAG-2; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: 5'-D(P*CP*AP*CP*AP*GP*TP*GP*CP*TP*AP*CP*AP*GP*AP*C)-3'; COMPND 14 CHAIN: E, H; COMPND 15 ENGINEERED: YES; COMPND 16 OTHER_DETAILS: SIGNAL END FORWARD STRAND; COMPND 17 MOL_ID: 4; COMPND 18 MOLECULE: RSS INTERMEDIATE REVERSE STRAND; COMPND 19 CHAIN: F, G; COMPND 20 ENGINEERED: YES; COMPND 21 MOL_ID: 5; COMPND 22 MOLECULE: '-D(P*GP*AP*TP*CP*TP*GP*GP*CP*CP*TP*GP*TP*CP*TP*TP*A)-3'; COMPND 23 CHAIN: I, J; COMPND 24 ENGINEERED: YES; COMPND 25 OTHER_DETAILS: CODING END FORWARD STRAND SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DANIO RERIO; SOURCE 3 ORGANISM_COMMON: ZEBRA FISH; SOURCE 4 ORGANISM_TAXID: 7955; SOURCE 5 STRAIN: AB; SOURCE 6 CELL: B AND T LYMPHOCYTE; SOURCE 7 ORGANELLE: NUCLEUS; SOURCE 8 GENE: RAG1; SOURCE 9 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 10 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 11 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 12 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 13 EXPRESSION_SYSTEM_PLASMID: PFASTBAC1; SOURCE 14 MOL_ID: 2; SOURCE 15 ORGANISM_SCIENTIFIC: DANIO RERIO; SOURCE 16 ORGANISM_COMMON: ZEBRA FISH; SOURCE 17 ORGANISM_TAXID: 7955; SOURCE 18 STRAIN: AB; SOURCE 19 CELL: B AND T LYMPHOCYTE; SOURCE 20 ORGANELLE: NUCLEUS; SOURCE 21 GENE: RAG2, RAG-2; SOURCE 22 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 23 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 24 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 25 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 26 EXPRESSION_SYSTEM_PLASMID: PFASTBAC1; SOURCE 27 MOL_ID: 3; SOURCE 28 SYNTHETIC: YES; SOURCE 29 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 30 ORGANISM_COMMON: HUMAN; SOURCE 31 ORGANISM_TAXID: 9606; SOURCE 32 MOL_ID: 4; SOURCE 33 SYNTHETIC: YES; SOURCE 34 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 35 ORGANISM_COMMON: HUMAN; SOURCE 36 ORGANISM_TAXID: 9606; SOURCE 37 MOL_ID: 5; SOURCE 38 SYNTHETIC: YES; SOURCE 39 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 40 ORGANISM_COMMON: HUMAN; SOURCE 41 ORGANISM_TAXID: 9606 KEYWDS RAG1, RAG2, V(D)J RECOMBINATION, PAIRED COMPLEX, ANTIGEN RECEPTOR KEYWDS 2 GENE RECOMBINATION, T AND B CELL DEVELOPMENT, RECOMBINATION-DNA KEYWDS 3 COMPLEX EXPDTA ELECTRON MICROSCOPY AUTHOR H.RU,M.G.CHAMBERS,T.-M.FU,A.B.TONG,M.LIAO,H.WU REVDAT 3 21-FEB-24 3JBY 1 REMARK SEQADV REVDAT 2 18-JUL-18 3JBY 1 REMARK REVDAT 1 09-DEC-15 3JBY 0 JRNL AUTH H.RU,M.G.CHAMBERS,T.M.FU,A.B.TONG,M.LIAO,H.WU JRNL TITL MOLECULAR MECHANISM OF V(D)J RECOMBINATION FROM SYNAPTIC JRNL TITL 2 RAG1-RAG2 COMPLEX STRUCTURES. JRNL REF CELL(CAMBRIDGE,MASS.) V. 163 1138 2015 JRNL REFN ISSN 0092-8674 JRNL PMID 26548953 JRNL DOI 10.1016/J.CELL.2015.10.055 REMARK 2 REMARK 2 RESOLUTION. 3.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : RELION, SPIDER REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : 1.230 REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.700 REMARK 3 NUMBER OF PARTICLES : 42486 REMARK 3 CTF CORRECTION METHOD : NULL REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: (SINGLE PARTICLE DETAILS: IMAGE PROCESSING WAS REMARK 3 CARRIED OUT USING SAMUEL AND RELION.) (SINGLE PARTICLE--APPLIED REMARK 3 SYMMETRY: C2) REMARK 4 REMARK 4 3JBY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-NOV-15. REMARK 100 THE DEPOSITION ID IS D_1000160508. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : VITREOUS ICE (CRYO EM) REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : PAIRED COMPLEX OF RAG1-RAG2; REMARK 245 RECOMBINATION ACTIVATING GENE 1; REMARK 245 RECOMBINATION ACTIVATING GENE 2 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 0.40 REMARK 245 SAMPLE SUPPORT DETAILS : 400 MESH QUANTIFOIL HOLEY REMARK 245 CARBON GRID, GLOW DISCHARGED REMARK 245 SAMPLE VITRIFICATION DETAILS : BLOT FOR 2.5 SECONDS BEFORE REMARK 245 PLUNGING INTO LIQUID ETHANE REMARK 245 (GATAN CRYOPLUNGE 3). REMARK 245 SAMPLE BUFFER : POLYMIX BUFFER REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : DIMER OF RAG1-RAG2 BINDS TO REMARK 245 NICKED 12-RSS AND 23-RSS INTERMEDIATES WITH HMGB1 REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : 10-MAR-15 REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : 100.00 REMARK 245 MICROSCOPE MODEL : FEI POLARA 300 REMARK 245 DETECTOR TYPE : GATAN K2 (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1500.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.00 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 4100.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 31000 REMARK 245 CALIBRATED MAGNIFICATION : 40607 REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DECAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H, I, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE2 GLN A 858 O ALA A 887 2.02 REMARK 500 OE2 GLU C 981 N2 DG F 15 2.10 REMARK 500 OG SER C 760 O ASP C 951 2.12 REMARK 500 NZ LYS A 508 OP1 DG F 5 2.13 REMARK 500 OG SER B 113 OG1 THR B 121 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DT E 6 O3' DT E 6 C3' -0.090 REMARK 500 DT E 6 C1' DT E 6 N1 -0.103 REMARK 500 DG E 7 O3' DG E 7 C3' -0.067 REMARK 500 DC F 11 O3' DC F 11 C3' -0.080 REMARK 500 DT F 12 O3' DT F 12 C3' -0.051 REMARK 500 DG F 13 O3' DG F 13 C3' -0.076 REMARK 500 DG F 15 C1' DG F 15 N9 -0.126 REMARK 500 DG F 15 N7 DG F 15 C8 -0.042 REMARK 500 DT F 16 O3' DT F 16 C3' -0.037 REMARK 500 DG F 19 O3' DG F 19 C3' -0.039 REMARK 500 DG F 19 N9 DG F 19 C4 -0.048 REMARK 500 DC G 11 O3' DC G 11 C3' -0.096 REMARK 500 DC G 11 C1' DC G 11 N1 -0.095 REMARK 500 DT G 12 O3' DT G 12 C3' -0.072 REMARK 500 DG G 13 O3' DG G 13 C3' -0.060 REMARK 500 DG G 15 O3' DG G 15 C3' -0.068 REMARK 500 DA G 20 O3' DA G 20 C3' -0.041 REMARK 500 DT H 6 O3' DT H 6 C3' -0.080 REMARK 500 DT H 6 C1' DT H 6 N1 -0.107 REMARK 500 DG H 7 O3' DG H 7 C3' -0.093 REMARK 500 DT H 9 C1' DT H 9 N1 -0.085 REMARK 500 DA H 12 N9 DA H 12 C4 -0.043 REMARK 500 DG I 7 O3' DG I 7 C3' -0.060 REMARK 500 DC I 8 O3' DC I 8 C3' -0.060 REMARK 500 DG I 11 N9 DG I 11 C4 0.048 REMARK 500 DT I 15 O3' DT I 15 C3' -0.037 REMARK 500 DA I 16 O3' DA I 16 C3' 0.084 REMARK 500 DG J 7 O3' DG J 7 C3' -0.038 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 530 CB - CG - CD2 ANGL. DEV. = -13.3 DEGREES REMARK 500 LEU A1006 CB - CG - CD2 ANGL. DEV. = -12.9 DEGREES REMARK 500 CYS C 497 CA - CB - SG ANGL. DEV. = 8.5 DEGREES REMARK 500 LEU C 530 CB - CG - CD2 ANGL. DEV. = -11.0 DEGREES REMARK 500 LEU C 679 CB - CG - CD2 ANGL. DEV. = -10.5 DEGREES REMARK 500 LEU C1006 CB - CG - CD2 ANGL. DEV. = -10.8 DEGREES REMARK 500 PRO D 339 C - N - CA ANGL. DEV. = 9.6 DEGREES REMARK 500 DG F 15 C8 - N9 - C4 ANGL. DEV. = 3.5 DEGREES REMARK 500 DG F 15 N9 - C4 - C5 ANGL. DEV. = -2.5 DEGREES REMARK 500 DT F 16 O3' - P - OP2 ANGL. DEV. = 7.4 DEGREES REMARK 500 DC F 31 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DG G 1 O4' - C1' - N9 ANGL. DEV. = 2.6 DEGREES REMARK 500 DG G 15 O4' - C1' - N9 ANGL. DEV. = -4.9 DEGREES REMARK 500 DG I 6 O5' - P - OP2 ANGL. DEV. = -5.5 DEGREES REMARK 500 DT J 5 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DG J 6 O5' - P - OP2 ANGL. DEV. = -10.4 DEGREES REMARK 500 DG J 11 O4' - C1' - N9 ANGL. DEV. = 3.5 DEGREES REMARK 500 DT J 12 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 490 -63.84 -94.26 REMARK 500 ILE A 515 -61.20 -100.99 REMARK 500 ASP A 604 -72.84 -99.15 REMARK 500 ARG A 652 -58.08 -124.93 REMARK 500 GLU A 656 -132.21 56.74 REMARK 500 ASP A 657 51.46 39.28 REMARK 500 ASP A 658 -117.53 46.21 REMARK 500 ILE A 662 -59.30 -120.77 REMARK 500 LEU A 677 -58.25 -126.78 REMARK 500 GLN A 761 -72.38 -54.00 REMARK 500 ARG A 783 -62.06 -91.66 REMARK 500 ILE A 834 -74.08 -55.84 REMARK 500 ARG A 922 -60.66 -102.69 REMARK 500 ALA A 963 -63.75 -121.04 REMARK 500 ILE A 975 -60.70 -129.07 REMARK 500 VAL B 9 -121.22 52.57 REMARK 500 GLU B 25 71.61 47.42 REMARK 500 ASP B 112 -68.81 -129.23 REMARK 500 THR B 165 -61.87 -128.58 REMARK 500 ILE B 266 -60.84 -122.19 REMARK 500 TYR B 268 -76.74 -55.72 REMARK 500 SER C 511 -5.97 64.91 REMARK 500 ILE C 515 -61.65 -96.56 REMARK 500 PHE C 533 -68.10 -127.65 REMARK 500 SER C 631 -68.86 -108.32 REMARK 500 ARG C 652 -57.99 -121.19 REMARK 500 GLU C 656 -107.07 55.80 REMARK 500 ASP C 658 -133.44 41.20 REMARK 500 LEU C 677 -58.72 -128.66 REMARK 500 MET C 763 -64.85 -127.41 REMARK 500 HIS C 772 -70.56 -51.48 REMARK 500 ASN C 785 71.68 54.44 REMARK 500 MET C 863 -16.18 74.87 REMARK 500 ARG C 922 -58.96 -124.13 REMARK 500 SER C 944 -73.73 -80.61 REMARK 500 ALA C 963 -64.85 -122.14 REMARK 500 HIS C1028 71.69 46.45 REMARK 500 VAL D 9 -129.78 49.17 REMARK 500 CYS D 11 72.54 58.96 REMARK 500 GLU D 25 73.29 46.22 REMARK 500 ARG D 73 -70.74 -93.22 REMARK 500 ASP D 112 -69.30 -125.39 REMARK 500 GLN D 213 73.37 45.32 REMARK 500 ILE D 266 -72.61 -127.90 REMARK 500 TYR D 268 -77.94 -54.76 REMARK 500 THR D 281 -57.91 -124.96 REMARK 500 ASN D 336 127.03 -171.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASP A 658 GLY A 659 137.23 REMARK 500 PHE A 1004 GLU A 1005 -145.84 REMARK 500 ASP C 658 GLY C 659 142.38 REMARK 500 ALA C 742 SER C 743 -32.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 1101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA C 1102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA C 1103 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-6488 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-6489 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-6487 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-6490 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-6491 RELATED DB: EMDB REMARK 900 RELATED ID: 3JBW RELATED DB: PDB REMARK 900 RELATED ID: 3JBX RELATED DB: PDB DBREF 3JBY A 271 1031 UNP O13033 RAG1_DANRE 271 1031 DBREF 3JBY B 1 530 UNP Q1RLW7 Q1RLW7_DANRE 1 530 DBREF 3JBY C 271 1031 UNP O13033 RAG1_DANRE 271 1031 DBREF 3JBY D 1 530 UNP Q1RLW7 Q1RLW7_DANRE 1 530 DBREF 3JBY E 1 15 PDB 3JBY 3JBY 1 15 DBREF 3JBY H 1 15 PDB 3JBY 3JBY 1 15 DBREF 3JBY F 1 31 PDB 3JBY 3JBY 1 31 DBREF 3JBY G 1 31 PDB 3JBY 3JBY 1 31 DBREF 3JBY I 1 16 PDB 3JBY 3JBY 1 16 DBREF 3JBY J 1 16 PDB 3JBY 3JBY 1 16 SEQADV 3JBY GLY A 268 UNP O13033 EXPRESSION TAG SEQADV 3JBY GLY A 269 UNP O13033 EXPRESSION TAG SEQADV 3JBY SER A 270 UNP O13033 EXPRESSION TAG SEQADV 3JBY GLY B -2 UNP Q1RLW7 EXPRESSION TAG SEQADV 3JBY GLY B -1 UNP Q1RLW7 EXPRESSION TAG SEQADV 3JBY SER B 0 UNP Q1RLW7 EXPRESSION TAG SEQADV 3JBY GLY C 268 UNP O13033 EXPRESSION TAG SEQADV 3JBY GLY C 269 UNP O13033 EXPRESSION TAG SEQADV 3JBY SER C 270 UNP O13033 EXPRESSION TAG SEQADV 3JBY GLY D -2 UNP Q1RLW7 EXPRESSION TAG SEQADV 3JBY GLY D -1 UNP Q1RLW7 EXPRESSION TAG SEQADV 3JBY SER D 0 UNP Q1RLW7 EXPRESSION TAG SEQRES 1 A 764 GLY GLY SER ARG CYS GLN ARG ASP HIS LEU SER THR LYS SEQRES 2 A 764 LEU ILE PRO THR GLU VAL PRO ALA ASP LEU ILE ARG ALA SEQRES 3 A 764 VAL THR CYS GLN VAL CYS ASP HIS LEU LEU SER ASP PRO SEQRES 4 A 764 VAL GLN SER PRO CYS ARG HIS LEU PHE CYS ARG LEU CYS SEQRES 5 A 764 ILE ILE ARG TYR THR HIS ALA LEU GLY PRO ASN CYS PRO SEQRES 6 A 764 THR CYS ASN GLN HIS LEU ASN PRO SER HIS LEU ILE LYS SEQRES 7 A 764 PRO ALA LYS PHE PHE LEU ALA THR LEU SER SER LEU PRO SEQRES 8 A 764 LEU LEU CYS PRO SER GLU GLU CYS SER ASP TRP VAL ARG SEQRES 9 A 764 LEU ASP SER PHE ARG GLU HIS CYS LEU ASN HIS TYR ARG SEQRES 10 A 764 GLU LYS GLU SER GLN GLU GLU GLN THR PRO SER GLU GLN SEQRES 11 A 764 ASN LEU ASP GLY TYR LEU PRO VAL ASN LYS GLY GLY ARG SEQRES 12 A 764 PRO ARG GLN HIS LEU LEU SER LEU THR ARG ARG ALA GLN SEQRES 13 A 764 LYS HIS ARG LEU ARG ASP LEU LYS ASN GLN VAL LYS THR SEQRES 14 A 764 PHE ALA GLU LYS GLU GLU GLY GLY ASP VAL LYS SER VAL SEQRES 15 A 764 CYS LEU THR LEU PHE LEU LEU ALA LEU ARG ALA GLY ASN SEQRES 16 A 764 GLU HIS LYS GLN ALA ASP GLU LEU GLU ALA MET MET GLN SEQRES 17 A 764 GLY ARG GLY PHE GLY LEU HIS PRO ALA VAL CYS LEU ALA SEQRES 18 A 764 ILE ARG VAL ASN THR PHE LEU SER CYS SER GLN TYR HIS SEQRES 19 A 764 LYS MET TYR ARG THR VAL LYS ALA THR SER GLY ARG GLN SEQRES 20 A 764 ILE PHE GLN PRO LEU HIS THR LEU ARG ASN ALA GLU LYS SEQRES 21 A 764 GLU LEU LEU PRO GLY PHE HIS GLN PHE GLU TRP GLN PRO SEQRES 22 A 764 ALA LEU LYS ASN VAL SER THR SER TRP ASP VAL GLY ILE SEQRES 23 A 764 ILE ASP GLY LEU SER GLY TRP THR VAL SER VAL ASP ASP SEQRES 24 A 764 VAL PRO ALA ASP THR ILE SER ARG ARG PHE ARG TYR ASP SEQRES 25 A 764 VAL ALA LEU VAL SER ALA LEU LYS ASP LEU GLU GLU ASP SEQRES 26 A 764 ILE MET GLU GLY LEU ARG GLU ARG ALA LEU ASP ASP SER SEQRES 27 A 764 MET CYS THR SER GLY PHE THR VAL VAL VAL LYS GLU SER SEQRES 28 A 764 CYS ASP GLY MET GLY ASP VAL SER GLU LYS HIS GLY SER SEQRES 29 A 764 GLY PRO ALA VAL PRO GLU LYS ALA VAL ARG PHE SER PHE SEQRES 30 A 764 THR ILE MET SER ILE SER ILE ARG LEU GLU GLY GLU ASP SEQRES 31 A 764 ASP GLY ILE THR ILE PHE GLN GLU GLN LYS PRO ASN SER SEQRES 32 A 764 GLU LEU SER CYS ARG PRO LEU CYS LEU MET PHE VAL ASP SEQRES 33 A 764 GLU SER ASP HIS GLU THR LEU THR ALA ILE LEU GLY PRO SEQRES 34 A 764 VAL VAL ALA GLU ARG LYS ALA MET MET GLU SER ARG LEU SEQRES 35 A 764 ILE ILE SER VAL GLY GLY LEU LEU ARG SER PHE ARG PHE SEQRES 36 A 764 PHE PHE ARG GLY THR GLY TYR ASP GLU LYS MET VAL ARG SEQRES 37 A 764 GLU MET GLU GLY LEU GLU ALA SER GLY SER THR TYR ILE SEQRES 38 A 764 CYS THR LEU CYS ASP SER THR ARG ALA GLU ALA SER GLN SEQRES 39 A 764 ASN MET VAL LEU HIS SER ILE THR ARG SER HIS ASP GLU SEQRES 40 A 764 ASN LEU GLU ARG TYR GLU ILE TRP ARG LYS ASN PRO PHE SEQRES 41 A 764 SER GLU SER ALA ASP GLU LEU ARG ASP ARG VAL LYS GLY SEQRES 42 A 764 VAL SER ALA LYS PRO PHE MET GLU THR GLN PRO THR LEU SEQRES 43 A 764 ASP ALA LEU HIS CYS ASP ILE GLY ASN ALA THR GLU PHE SEQRES 44 A 764 TYR LYS ILE PHE GLN ASP GLU ILE GLY GLU VAL TYR GLN SEQRES 45 A 764 LYS PRO ASN PRO SER ARG GLU GLU ARG ARG ARG TRP ARG SEQRES 46 A 764 SER THR LEU ASP LYS GLN LEU ARG LYS LYS MET LYS LEU SEQRES 47 A 764 LYS PRO VAL MET ARG MET ASN GLY ASN TYR ALA ARG ARG SEQRES 48 A 764 LEU MET THR ARG GLU ALA VAL GLU ALA VAL CYS GLU LEU SEQRES 49 A 764 VAL PRO SER GLU GLU ARG ARG GLU ALA LEU LEU LYS LEU SEQRES 50 A 764 MET ASP LEU TYR LEU GLN MET LYS PRO VAL TRP ARG SER SEQRES 51 A 764 THR CYS PRO SER ARG ASP CYS PRO ASP GLN LEU CYS GLN SEQRES 52 A 764 TYR SER TYR ASN SER GLN GLN PHE ALA ASP LEU LEU SER SEQRES 53 A 764 SER MET PHE LYS TYR ARG TYR ASP GLY LYS ILE THR ASN SEQRES 54 A 764 TYR LEU HIS LYS THR LEU ALA HIS VAL PRO GLU ILE VAL SEQRES 55 A 764 GLU ARG ASP GLY SER ILE GLY ALA TRP ALA SER GLU GLY SEQRES 56 A 764 ASN GLU SER GLY ASN LYS LEU PHE ARG ARG PHE ARG LYS SEQRES 57 A 764 MET ASN ALA ARG GLN SER LYS THR PHE GLU LEU GLU ASP SEQRES 58 A 764 ILE LEU LYS HIS HIS TRP LEU TYR THR SER LYS TYR LEU SEQRES 59 A 764 GLN LYS PHE MET GLU ALA HIS LYS ASN SER SEQRES 1 B 533 GLY GLY SER MET SER LEU GLN PRO LEU THR ALA VAL ASN SEQRES 2 B 533 CYS GLY SER LEU VAL GLN PRO GLY PHE SER LEU LEU ASP SEQRES 3 B 533 LEU GLU GLY ASP VAL TYR LEU PHE GLY GLN LYS GLY TRP SEQRES 4 B 533 PRO LYS ARG SER CYS PRO THR GLY ILE PHE GLY VAL ARG SEQRES 5 B 533 ILE LYS LYS GLY GLU LEU LYS LEU ARG ALA ILE SER PHE SEQRES 6 B 533 SER ASN ASN SER SER TYR LEU PRO PRO LEU ARG CYS PRO SEQRES 7 B 533 ALA ILE ALA HIS PHE GLU ALA GLN ASP GLY LYS PRO GLU SEQRES 8 B 533 CYS TYR LEU ILE HIS GLY GLY ARG THR PRO ASN ASN GLU SEQRES 9 B 533 LEU SER SER SER LEU TYR MET LEU SER VAL ASP SER ARG SEQRES 10 B 533 GLY CYS ASN ARG LYS VAL THR LEU ARG CYS GLU GLU LYS SEQRES 11 B 533 GLU LEU VAL GLY ASP VAL PRO SER ALA ARG TYR GLY HIS SEQRES 12 B 533 THR LEU SER VAL ILE ASN SER ARG GLY LYS THR ALA CYS SEQRES 13 B 533 VAL LEU PHE GLY GLY ARG SER TYR MET PRO PRO THR GLU SEQRES 14 B 533 ARG THR THR GLN ASN TRP ASN SER VAL VAL ASP CYS PRO SEQRES 15 B 533 PRO GLN VAL TYR LEU ILE ASP LEU GLU PHE GLY CYS CYS SEQRES 16 B 533 THR ALA HIS THR LEU PRO GLU LEU THR ASP GLY GLN SER SEQRES 17 B 533 PHE HIS VAL ALA LEU ALA ARG GLN ASP CYS VAL TYR PHE SEQRES 18 B 533 LEU GLY GLY HIS ILE LEU SER SER ASP CYS ARG PRO SER SEQRES 19 B 533 ARG LEU ILE ARG LEU HIS VAL GLU LEU LEU LEU GLY SER SEQRES 20 B 533 PRO VAL LEU THR CYS THR ILE LEU HIS GLU GLY LEU THR SEQRES 21 B 533 ILE THR SER ALA ILE ALA SER PRO ILE GLY TYR HIS GLU SEQRES 22 B 533 TYR ILE ILE PHE GLY GLY TYR GLN SER GLU THR GLN LYS SEQRES 23 B 533 ARG MET GLU CYS THR TYR VAL GLY LEU ASP ASP VAL GLY SEQRES 24 B 533 VAL HIS MET GLU SER ARG GLU PRO PRO GLN TRP THR SER SEQRES 25 B 533 GLU ILE SER HIS SER ARG THR TRP PHE GLY GLY SER LEU SEQRES 26 B 533 GLY LYS GLY THR ALA LEU VAL ALA ILE PRO SER GLU GLY SEQRES 27 B 533 ASN PRO THR PRO PRO GLU ALA TYR HIS PHE TYR GLN VAL SEQRES 28 B 533 SER PHE GLN LYS GLU GLN ASP GLY GLU ALA THR ALA GLN SEQRES 29 B 533 GLY GLY SER GLN GLU SER THR ASP PHE GLU ASP SER ALA SEQRES 30 B 533 PRO LEU GLU ASP SER GLU GLU LEU TYR PHE GLY ARG GLU SEQRES 31 B 533 PRO HIS GLU LEU GLU TYR SER SER ASP VAL GLU GLY ASP SEQRES 32 B 533 THR TYR ASN GLU GLU ASP GLU GLU ASP GLU SER GLN THR SEQRES 33 B 533 GLY TYR TRP ILE LYS CYS CYS LEU SER CYS GLN VAL ASP SEQRES 34 B 533 PRO ASN ILE TRP GLU PRO TYR TYR SER THR GLU LEU THR SEQRES 35 B 533 ARG PRO ALA MET ILE PHE CYS SER ARG GLY GLU GLY GLY SEQRES 36 B 533 HIS TRP VAL HIS ALA GLN CYS MET GLU LEU PRO GLU SER SEQRES 37 B 533 LEU LEU LEU GLN LEU SER GLN ASP ASN SER LYS TYR PHE SEQRES 38 B 533 CYS LEU ASP HIS GLY GLY LEU PRO LYS GLN GLU MET THR SEQRES 39 B 533 PRO PRO LYS GLN MET LEU PRO VAL LYS ARG VAL PRO MET SEQRES 40 B 533 LYS MET THR HIS ARG LYS ALA PRO VAL SER LEU LYS MET SEQRES 41 B 533 THR PRO ALA LYS LYS THR PHE LEU ARG ARG LEU PHE ASP SEQRES 1 C 764 GLY GLY SER ARG CYS GLN ARG ASP HIS LEU SER THR LYS SEQRES 2 C 764 LEU ILE PRO THR GLU VAL PRO ALA ASP LEU ILE ARG ALA SEQRES 3 C 764 VAL THR CYS GLN VAL CYS ASP HIS LEU LEU SER ASP PRO SEQRES 4 C 764 VAL GLN SER PRO CYS ARG HIS LEU PHE CYS ARG LEU CYS SEQRES 5 C 764 ILE ILE ARG TYR THR HIS ALA LEU GLY PRO ASN CYS PRO SEQRES 6 C 764 THR CYS ASN GLN HIS LEU ASN PRO SER HIS LEU ILE LYS SEQRES 7 C 764 PRO ALA LYS PHE PHE LEU ALA THR LEU SER SER LEU PRO SEQRES 8 C 764 LEU LEU CYS PRO SER GLU GLU CYS SER ASP TRP VAL ARG SEQRES 9 C 764 LEU ASP SER PHE ARG GLU HIS CYS LEU ASN HIS TYR ARG SEQRES 10 C 764 GLU LYS GLU SER GLN GLU GLU GLN THR PRO SER GLU GLN SEQRES 11 C 764 ASN LEU ASP GLY TYR LEU PRO VAL ASN LYS GLY GLY ARG SEQRES 12 C 764 PRO ARG GLN HIS LEU LEU SER LEU THR ARG ARG ALA GLN SEQRES 13 C 764 LYS HIS ARG LEU ARG ASP LEU LYS ASN GLN VAL LYS THR SEQRES 14 C 764 PHE ALA GLU LYS GLU GLU GLY GLY ASP VAL LYS SER VAL SEQRES 15 C 764 CYS LEU THR LEU PHE LEU LEU ALA LEU ARG ALA GLY ASN SEQRES 16 C 764 GLU HIS LYS GLN ALA ASP GLU LEU GLU ALA MET MET GLN SEQRES 17 C 764 GLY ARG GLY PHE GLY LEU HIS PRO ALA VAL CYS LEU ALA SEQRES 18 C 764 ILE ARG VAL ASN THR PHE LEU SER CYS SER GLN TYR HIS SEQRES 19 C 764 LYS MET TYR ARG THR VAL LYS ALA THR SER GLY ARG GLN SEQRES 20 C 764 ILE PHE GLN PRO LEU HIS THR LEU ARG ASN ALA GLU LYS SEQRES 21 C 764 GLU LEU LEU PRO GLY PHE HIS GLN PHE GLU TRP GLN PRO SEQRES 22 C 764 ALA LEU LYS ASN VAL SER THR SER TRP ASP VAL GLY ILE SEQRES 23 C 764 ILE ASP GLY LEU SER GLY TRP THR VAL SER VAL ASP ASP SEQRES 24 C 764 VAL PRO ALA ASP THR ILE SER ARG ARG PHE ARG TYR ASP SEQRES 25 C 764 VAL ALA LEU VAL SER ALA LEU LYS ASP LEU GLU GLU ASP SEQRES 26 C 764 ILE MET GLU GLY LEU ARG GLU ARG ALA LEU ASP ASP SER SEQRES 27 C 764 MET CYS THR SER GLY PHE THR VAL VAL VAL LYS GLU SER SEQRES 28 C 764 CYS ASP GLY MET GLY ASP VAL SER GLU LYS HIS GLY SER SEQRES 29 C 764 GLY PRO ALA VAL PRO GLU LYS ALA VAL ARG PHE SER PHE SEQRES 30 C 764 THR ILE MET SER ILE SER ILE ARG LEU GLU GLY GLU ASP SEQRES 31 C 764 ASP GLY ILE THR ILE PHE GLN GLU GLN LYS PRO ASN SER SEQRES 32 C 764 GLU LEU SER CYS ARG PRO LEU CYS LEU MET PHE VAL ASP SEQRES 33 C 764 GLU SER ASP HIS GLU THR LEU THR ALA ILE LEU GLY PRO SEQRES 34 C 764 VAL VAL ALA GLU ARG LYS ALA MET MET GLU SER ARG LEU SEQRES 35 C 764 ILE ILE SER VAL GLY GLY LEU LEU ARG SER PHE ARG PHE SEQRES 36 C 764 PHE PHE ARG GLY THR GLY TYR ASP GLU LYS MET VAL ARG SEQRES 37 C 764 GLU MET GLU GLY LEU GLU ALA SER GLY SER THR TYR ILE SEQRES 38 C 764 CYS THR LEU CYS ASP SER THR ARG ALA GLU ALA SER GLN SEQRES 39 C 764 ASN MET VAL LEU HIS SER ILE THR ARG SER HIS ASP GLU SEQRES 40 C 764 ASN LEU GLU ARG TYR GLU ILE TRP ARG LYS ASN PRO PHE SEQRES 41 C 764 SER GLU SER ALA ASP GLU LEU ARG ASP ARG VAL LYS GLY SEQRES 42 C 764 VAL SER ALA LYS PRO PHE MET GLU THR GLN PRO THR LEU SEQRES 43 C 764 ASP ALA LEU HIS CYS ASP ILE GLY ASN ALA THR GLU PHE SEQRES 44 C 764 TYR LYS ILE PHE GLN ASP GLU ILE GLY GLU VAL TYR GLN SEQRES 45 C 764 LYS PRO ASN PRO SER ARG GLU GLU ARG ARG ARG TRP ARG SEQRES 46 C 764 SER THR LEU ASP LYS GLN LEU ARG LYS LYS MET LYS LEU SEQRES 47 C 764 LYS PRO VAL MET ARG MET ASN GLY ASN TYR ALA ARG ARG SEQRES 48 C 764 LEU MET THR ARG GLU ALA VAL GLU ALA VAL CYS GLU LEU SEQRES 49 C 764 VAL PRO SER GLU GLU ARG ARG GLU ALA LEU LEU LYS LEU SEQRES 50 C 764 MET ASP LEU TYR LEU GLN MET LYS PRO VAL TRP ARG SER SEQRES 51 C 764 THR CYS PRO SER ARG ASP CYS PRO ASP GLN LEU CYS GLN SEQRES 52 C 764 TYR SER TYR ASN SER GLN GLN PHE ALA ASP LEU LEU SER SEQRES 53 C 764 SER MET PHE LYS TYR ARG TYR ASP GLY LYS ILE THR ASN SEQRES 54 C 764 TYR LEU HIS LYS THR LEU ALA HIS VAL PRO GLU ILE VAL SEQRES 55 C 764 GLU ARG ASP GLY SER ILE GLY ALA TRP ALA SER GLU GLY SEQRES 56 C 764 ASN GLU SER GLY ASN LYS LEU PHE ARG ARG PHE ARG LYS SEQRES 57 C 764 MET ASN ALA ARG GLN SER LYS THR PHE GLU LEU GLU ASP SEQRES 58 C 764 ILE LEU LYS HIS HIS TRP LEU TYR THR SER LYS TYR LEU SEQRES 59 C 764 GLN LYS PHE MET GLU ALA HIS LYS ASN SER SEQRES 1 D 533 GLY GLY SER MET SER LEU GLN PRO LEU THR ALA VAL ASN SEQRES 2 D 533 CYS GLY SER LEU VAL GLN PRO GLY PHE SER LEU LEU ASP SEQRES 3 D 533 LEU GLU GLY ASP VAL TYR LEU PHE GLY GLN LYS GLY TRP SEQRES 4 D 533 PRO LYS ARG SER CYS PRO THR GLY ILE PHE GLY VAL ARG SEQRES 5 D 533 ILE LYS LYS GLY GLU LEU LYS LEU ARG ALA ILE SER PHE SEQRES 6 D 533 SER ASN ASN SER SER TYR LEU PRO PRO LEU ARG CYS PRO SEQRES 7 D 533 ALA ILE ALA HIS PHE GLU ALA GLN ASP GLY LYS PRO GLU SEQRES 8 D 533 CYS TYR LEU ILE HIS GLY GLY ARG THR PRO ASN ASN GLU SEQRES 9 D 533 LEU SER SER SER LEU TYR MET LEU SER VAL ASP SER ARG SEQRES 10 D 533 GLY CYS ASN ARG LYS VAL THR LEU ARG CYS GLU GLU LYS SEQRES 11 D 533 GLU LEU VAL GLY ASP VAL PRO SER ALA ARG TYR GLY HIS SEQRES 12 D 533 THR LEU SER VAL ILE ASN SER ARG GLY LYS THR ALA CYS SEQRES 13 D 533 VAL LEU PHE GLY GLY ARG SER TYR MET PRO PRO THR GLU SEQRES 14 D 533 ARG THR THR GLN ASN TRP ASN SER VAL VAL ASP CYS PRO SEQRES 15 D 533 PRO GLN VAL TYR LEU ILE ASP LEU GLU PHE GLY CYS CYS SEQRES 16 D 533 THR ALA HIS THR LEU PRO GLU LEU THR ASP GLY GLN SER SEQRES 17 D 533 PHE HIS VAL ALA LEU ALA ARG GLN ASP CYS VAL TYR PHE SEQRES 18 D 533 LEU GLY GLY HIS ILE LEU SER SER ASP CYS ARG PRO SER SEQRES 19 D 533 ARG LEU ILE ARG LEU HIS VAL GLU LEU LEU LEU GLY SER SEQRES 20 D 533 PRO VAL LEU THR CYS THR ILE LEU HIS GLU GLY LEU THR SEQRES 21 D 533 ILE THR SER ALA ILE ALA SER PRO ILE GLY TYR HIS GLU SEQRES 22 D 533 TYR ILE ILE PHE GLY GLY TYR GLN SER GLU THR GLN LYS SEQRES 23 D 533 ARG MET GLU CYS THR TYR VAL GLY LEU ASP ASP VAL GLY SEQRES 24 D 533 VAL HIS MET GLU SER ARG GLU PRO PRO GLN TRP THR SER SEQRES 25 D 533 GLU ILE SER HIS SER ARG THR TRP PHE GLY GLY SER LEU SEQRES 26 D 533 GLY LYS GLY THR ALA LEU VAL ALA ILE PRO SER GLU GLY SEQRES 27 D 533 ASN PRO THR PRO PRO GLU ALA TYR HIS PHE TYR GLN VAL SEQRES 28 D 533 SER PHE GLN LYS GLU GLN ASP GLY GLU ALA THR ALA GLN SEQRES 29 D 533 GLY GLY SER GLN GLU SER THR ASP PHE GLU ASP SER ALA SEQRES 30 D 533 PRO LEU GLU ASP SER GLU GLU LEU TYR PHE GLY ARG GLU SEQRES 31 D 533 PRO HIS GLU LEU GLU TYR SER SER ASP VAL GLU GLY ASP SEQRES 32 D 533 THR TYR ASN GLU GLU ASP GLU GLU ASP GLU SER GLN THR SEQRES 33 D 533 GLY TYR TRP ILE LYS CYS CYS LEU SER CYS GLN VAL ASP SEQRES 34 D 533 PRO ASN ILE TRP GLU PRO TYR TYR SER THR GLU LEU THR SEQRES 35 D 533 ARG PRO ALA MET ILE PHE CYS SER ARG GLY GLU GLY GLY SEQRES 36 D 533 HIS TRP VAL HIS ALA GLN CYS MET GLU LEU PRO GLU SER SEQRES 37 D 533 LEU LEU LEU GLN LEU SER GLN ASP ASN SER LYS TYR PHE SEQRES 38 D 533 CYS LEU ASP HIS GLY GLY LEU PRO LYS GLN GLU MET THR SEQRES 39 D 533 PRO PRO LYS GLN MET LEU PRO VAL LYS ARG VAL PRO MET SEQRES 40 D 533 LYS MET THR HIS ARG LYS ALA PRO VAL SER LEU LYS MET SEQRES 41 D 533 THR PRO ALA LYS LYS THR PHE LEU ARG ARG LEU PHE ASP SEQRES 1 E 15 DC DA DC DA DG DT DG DC DT DA DC DA DG SEQRES 2 E 15 DA DC SEQRES 1 F 31 DG DT DC DT DG DT DA DG DC DA DC DT DG SEQRES 2 F 31 DT DG DT DA DA DG DA DC DA DG DG DC DC SEQRES 3 F 31 DA DG DA DT DC SEQRES 1 G 31 DG DT DC DT DG DT DA DG DC DA DC DT DG SEQRES 2 G 31 DT DG DT DA DA DG DA DC DA DG DG DC DC SEQRES 3 G 31 DA DG DA DT DC SEQRES 1 H 15 DC DA DC DA DG DT DG DC DT DA DC DA DG SEQRES 2 H 15 DA DC SEQRES 1 I 16 DG DA DT DC DT DG DG DC DC DT DG DT DC SEQRES 2 I 16 DT DT DA SEQRES 1 J 16 DG DA DT DC DT DG DG DC DC DT DG DT DC SEQRES 2 J 16 DT DT DA HET ZN A1101 1 HET CA A1102 1 HET CA A1103 1 HET ZN C1101 1 HET CA C1102 1 HET CA C1103 1 HETNAM ZN ZINC ION HETNAM CA CALCIUM ION FORMUL 11 ZN 2(ZN 2+) FORMUL 12 CA 4(CA 2+) HELIX 1 1 HIS A 482 ASN A 492 1 11 HELIX 2 2 SER A 496 THR A 510 1 15 HELIX 3 3 PRO A 518 ASN A 524 1 7 HELIX 4 4 ARG A 577 ASP A 588 1 12 HELIX 5 5 LEU A 589 ARG A 600 1 12 HELIX 6 6 ASP A 686 SER A 707 1 22 HELIX 7 7 ASP A 730 GLU A 738 1 9 HELIX 8 8 THR A 755 ASN A 762 1 8 HELIX 9 9 SER A 771 ASN A 785 1 15 HELIX 10 10 SER A 790 LYS A 799 1 10 HELIX 11 11 ASP A 814 GLY A 835 1 22 HELIX 12 12 SER A 844 LYS A 862 1 19 HELIX 13 13 ASN A 872 MET A 880 1 9 HELIX 14 14 THR A 881 CYS A 889 1 9 HELIX 15 15 SER A 894 SER A 917 1 24 HELIX 16 16 CYS A 919 CYS A 924 1 6 HELIX 17 17 CYS A 924 GLN A 930 1 7 HELIX 18 18 GLN A 930 PHE A 946 1 17 HELIX 19 19 PHE A 946 ASP A 951 1 6 HELIX 20 20 THR A 955 HIS A 964 1 10 HELIX 21 21 HIS A 964 ASP A 972 1 9 HELIX 22 22 ILE A 975 ALA A 979 5 5 HELIX 23 23 SER A 980 MET A 996 1 17 HELIX 24 24 SER A 1001 THR A 1017 1 17 HELIX 25 25 SER A 1018 PHE A 1024 1 7 HELIX 26 26 THR B 308 SER B 314 1 7 HELIX 27 27 HIS C 482 THR C 493 1 12 HELIX 28 28 SER C 496 THR C 510 1 15 HELIX 29 29 PRO C 518 ASN C 524 1 7 HELIX 30 30 ALA C 525 LEU C 529 5 5 HELIX 31 31 ARG C 577 ARG C 600 1 24 HELIX 32 32 ASP C 686 MET C 705 1 20 HELIX 33 33 ASP C 730 GLU C 738 1 9 HELIX 34 34 ALA C 757 ASN C 762 1 6 HELIX 35 35 SER C 771 ASN C 785 1 15 HELIX 36 36 SER C 790 VAL C 798 1 9 HELIX 37 37 ASP C 814 GLY C 835 1 22 HELIX 38 38 SER C 844 LYS C 862 1 19 HELIX 39 39 ASN C 872 MET C 880 1 9 HELIX 40 40 THR C 881 GLU C 890 1 10 HELIX 41 41 SER C 894 SER C 917 1 24 HELIX 42 42 CYS C 919 CYS C 924 1 6 HELIX 43 43 CYS C 924 GLN C 930 1 7 HELIX 44 44 GLN C 930 PHE C 946 1 17 HELIX 45 45 PHE C 946 ASP C 951 1 6 HELIX 46 46 THR C 955 HIS C 964 1 10 HELIX 47 47 HIS C 964 GLY C 973 1 10 HELIX 48 48 SER C 980 PHE C 993 1 14 HELIX 49 49 SER C 1001 SER C 1018 1 18 HELIX 50 50 SER C 1018 ALA C 1027 1 10 HELIX 51 51 THR D 308 SER D 314 1 7 SHEET 1 A 8 PHE A 536 GLN A 539 0 SHEET 2 A 8 ARG A 708 VAL A 713 -1 O ILE A 710 N GLU A 537 SHEET 3 A 8 LEU A 716 GLY A 726 -1 O ARG A 718 N ILE A 711 SHEET 4 A 8 PHE A 611 MET A 622 1 N VAL A 613 O ARG A 721 SHEET 5 A 8 ALA A 639 ILE A 651 -1 O ALA A 639 N MET A 622 SHEET 6 A 8 ARG A 675 PHE A 681 -1 O ARG A 675 N PHE A 644 SHEET 7 A 8 SER A 573 PHE A 576 -1 N ARG A 574 O LEU A 679 SHEET 8 A 8 ILE A 553 ASP A 555 -1 N ILE A 554 O ARG A 575 SHEET 1 B 6 PHE A 536 GLN A 539 0 SHEET 2 B 6 ARG A 708 VAL A 713 -1 O ILE A 710 N GLU A 537 SHEET 3 B 6 LEU A 716 GLY A 726 -1 O ARG A 718 N ILE A 711 SHEET 4 B 6 PHE A 611 MET A 622 1 N VAL A 613 O ARG A 721 SHEET 5 B 6 ALA A 639 ILE A 651 -1 O ALA A 639 N MET A 622 SHEET 6 B 6 ILE A 660 GLN A 664 -1 O ILE A 660 N ILE A 651 SHEET 1 C 4 SER B 2 LEU B 6 0 SHEET 2 C 4 TYR B 343 SER B 349 -1 O GLN B 347 N GLN B 4 SHEET 3 C 4 THR B 326 PRO B 332 -1 N ALA B 327 O VAL B 348 SHEET 4 C 4 PHE B 318 GLY B 323 -1 N GLY B 320 O LEU B 328 SHEET 1 D 4 SER B 20 ASP B 23 0 SHEET 2 D 4 VAL B 28 PHE B 31 -1 O TYR B 29 N LEU B 22 SHEET 3 D 4 PHE B 46 LYS B 51 -1 O VAL B 48 N VAL B 28 SHEET 4 D 4 GLU B 54 ALA B 59 -1 O ARG B 58 N GLY B 47 SHEET 1 E 5 SER B 61 PHE B 62 0 SHEET 2 E 5 VAL B 120 GLU B 126 1 O LEU B 122 N SER B 61 SHEET 3 E 5 TYR B 107 ARG B 114 -1 N MET B 108 O GLU B 125 SHEET 4 E 5 CYS B 89 HIS B 93 -1 N TYR B 90 O LEU B 109 SHEET 5 E 5 ALA B 76 PHE B 80 -1 N PHE B 80 O CYS B 89 SHEET 1 F 4 THR B 141 SER B 147 0 SHEET 2 F 4 LYS B 150 PHE B 156 -1 O PHE B 156 N THR B 141 SHEET 3 F 4 VAL B 182 ASP B 186 -1 O TYR B 183 N LEU B 155 SHEET 4 F 4 CYS B 192 HIS B 195 -1 O HIS B 195 N VAL B 182 SHEET 1 G 2 ARG B 159 TYR B 161 0 SHEET 2 G 2 VAL B 175 ASP B 177 -1 O VAL B 176 N SER B 160 SHEET 1 H 4 ALA B 209 ARG B 212 0 SHEET 2 H 4 CYS B 215 PHE B 218 -1 O TYR B 217 N LEU B 210 SHEET 3 H 4 ILE B 234 LEU B 241 -1 O ILE B 234 N PHE B 218 SHEET 4 H 4 SER B 244 ILE B 251 -1 O VAL B 246 N GLU B 239 SHEET 1 I 4 ALA B 263 PRO B 265 0 SHEET 2 I 4 TYR B 271 ILE B 273 -1 O ILE B 272 N SER B 264 SHEET 3 I 4 THR B 288 LEU B 292 -1 O VAL B 290 N TYR B 271 SHEET 4 I 4 VAL B 297 SER B 301 -1 O GLU B 300 N TYR B 289 SHEET 1 J 8 PHE C 536 GLN C 539 0 SHEET 2 J 8 ARG C 708 VAL C 713 -1 O ARG C 708 N GLN C 539 SHEET 3 J 8 LEU C 716 GLY C 726 -1 O ARG C 718 N ILE C 711 SHEET 4 J 8 PHE C 611 MET C 622 1 N VAL C 613 O PHE C 723 SHEET 5 J 8 ALA C 639 ILE C 651 -1 O ALA C 639 N MET C 622 SHEET 6 J 8 ARG C 675 MET C 680 -1 O ARG C 675 N PHE C 644 SHEET 7 J 8 SER C 573 ARG C 575 -1 N ARG C 574 O LEU C 679 SHEET 8 J 8 ILE C 554 ASP C 555 -1 N ILE C 554 O ARG C 575 SHEET 1 K 6 PHE C 536 GLN C 539 0 SHEET 2 K 6 ARG C 708 VAL C 713 -1 O ARG C 708 N GLN C 539 SHEET 3 K 6 LEU C 716 GLY C 726 -1 O ARG C 718 N ILE C 711 SHEET 4 K 6 PHE C 611 MET C 622 1 N VAL C 613 O PHE C 723 SHEET 5 K 6 ALA C 639 ILE C 651 -1 O ALA C 639 N MET C 622 SHEET 6 K 6 ILE C 660 GLN C 664 -1 O ILE C 660 N ILE C 651 SHEET 1 L 4 SER D 2 LEU D 6 0 SHEET 2 L 4 TYR D 343 SER D 349 -1 O GLN D 347 N GLN D 4 SHEET 3 L 4 THR D 326 PRO D 332 -1 N ALA D 327 O VAL D 348 SHEET 4 L 4 PHE D 318 GLY D 323 -1 N GLY D 320 O LEU D 328 SHEET 1 M 4 SER D 20 ASP D 23 0 SHEET 2 M 4 VAL D 28 PHE D 31 -1 O TYR D 29 N LEU D 22 SHEET 3 M 4 ILE D 45 LYS D 51 -1 O PHE D 46 N LEU D 30 SHEET 4 M 4 GLU D 54 ALA D 59 -1 O LYS D 56 N ARG D 49 SHEET 1 N 4 ALA D 76 PHE D 80 0 SHEET 2 N 4 CYS D 89 HIS D 93 -1 O LEU D 91 N ALA D 78 SHEET 3 N 4 LEU D 106 SER D 113 -1 O LEU D 109 N TYR D 90 SHEET 4 N 4 THR D 121 LYS D 127 -1 O ARG D 123 N SER D 110 SHEET 1 O 2 ARG D 96 THR D 97 0 SHEET 2 O 2 GLU D 101 LEU D 102 -1 O GLU D 101 N THR D 97 SHEET 1 P 4 THR D 141 SER D 147 0 SHEET 2 P 4 LYS D 150 PHE D 156 -1 O PHE D 156 N THR D 141 SHEET 3 P 4 GLN D 181 ILE D 185 -1 O TYR D 183 N LEU D 155 SHEET 4 P 4 CYS D 192 THR D 196 -1 O HIS D 195 N VAL D 182 SHEET 1 Q 2 ARG D 159 TYR D 161 0 SHEET 2 Q 2 VAL D 175 ASP D 177 -1 O VAL D 176 N SER D 160 SHEET 1 R 4 ALA D 209 ARG D 212 0 SHEET 2 R 4 CYS D 215 PHE D 218 -1 O TYR D 217 N LEU D 210 SHEET 3 R 4 ILE D 234 VAL D 238 -1 O ILE D 234 N PHE D 218 SHEET 4 R 4 LEU D 247 ILE D 251 -1 O THR D 250 N ARG D 235 SHEET 1 S 4 ALA D 263 PRO D 265 0 SHEET 2 S 4 TYR D 271 ILE D 273 -1 O ILE D 272 N SER D 264 SHEET 3 S 4 CYS D 287 LEU D 292 -1 O THR D 288 N ILE D 273 SHEET 4 S 4 VAL D 297 ARG D 302 -1 O GLU D 300 N TYR D 289 CISPEP 1 GLY A 512 ARG A 513 0 -13.55 CISPEP 2 GLN A 539 PRO A 540 0 -3.42 CISPEP 3 GLY A 632 PRO A 633 0 -7.10 CISPEP 4 LEU A 653 GLU A 654 0 11.08 CISPEP 5 ALA A 742 SER A 743 0 -24.87 CISPEP 6 ARG A 999 GLN A 1000 0 -4.84 CISPEP 7 ASP B 84 GLY B 85 0 -2.24 CISPEP 8 PRO B 87 GLU B 88 0 -15.95 CISPEP 9 HIS B 93 GLY B 94 0 -23.78 CISPEP 10 ARG B 114 GLY B 115 0 -21.47 CISPEP 11 GLY B 115 CYS B 116 0 -8.06 CISPEP 12 GLY B 131 ASP B 132 0 4.72 CISPEP 13 ARG B 148 GLY B 149 0 -17.24 CISPEP 14 GLU B 188 PHE B 189 0 7.62 CISPEP 15 LEU B 242 GLY B 243 0 2.19 CISPEP 16 ASN B 336 PRO B 337 0 -7.03 CISPEP 17 PRO B 339 PRO B 340 0 -7.88 CISPEP 18 GLY C 512 ARG C 513 0 -12.16 CISPEP 19 GLN C 539 PRO C 540 0 -9.47 CISPEP 20 GLY C 632 PRO C 633 0 -8.64 CISPEP 21 LEU C 653 GLU C 654 0 22.13 CISPEP 22 ARG C 999 GLN C 1000 0 11.87 CISPEP 23 ASP D 84 GLY D 85 0 -8.18 CISPEP 24 PRO D 87 GLU D 88 0 1.88 CISPEP 25 HIS D 93 GLY D 94 0 -25.89 CISPEP 26 ARG D 114 GLY D 115 0 -26.35 CISPEP 27 GLY D 115 CYS D 116 0 -8.82 CISPEP 28 GLY D 131 ASP D 132 0 -5.98 CISPEP 29 ARG D 148 GLY D 149 0 -15.27 CISPEP 30 GLU D 188 PHE D 189 0 8.67 CISPEP 31 LEU D 242 GLY D 243 0 -8.52 CISPEP 32 ASN D 336 PRO D 337 0 -8.55 CISPEP 33 PRO D 339 PRO D 340 0 -3.74 SITE 1 AC1 4 CYS A 749 CYS A 752 HIS A 959 HIS A 964 SITE 1 AC2 5 ASP A 620 GLY A 621 ASN A 987 DG G 15 SITE 2 AC2 5 DT G 16 SITE 1 AC3 5 ASP A 620 GLU A 684 ASP A 730 DT G 16 SITE 2 AC3 5 DA I 16 SITE 1 AC4 4 CYS C 749 CYS C 752 HIS C 959 HIS C 964 SITE 1 AC5 6 ASP C 620 GLY C 621 GLU C 984 ASN C 987 SITE 2 AC5 6 DG F 15 DT F 16 SITE 1 AC6 5 ASP C 620 GLU C 684 ASP C 730 DT F 16 SITE 2 AC6 5 DA J 16 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000