HEADER BIOSYNTHETIC PROTEIN 15-SEP-09 3JUN TITLE CRYSTAL STRUCTURE OF PHZA/B FROM BURKHOLDERIA CEPACIA R18194 IN TITLE 2 SIMULTANEOUS COMPLEX WITH RACEMIC 5-BROMO-2-(PIPERIDIN-3-YLAMINO) TITLE 3 BENZOIC ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHENAZINE BIOSYNTHESIS PROTEIN A/B; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA SP.; SOURCE 3 ORGANISM_COMMON: BURKHOLDERIA CEPACIA (STRAIN ATCC 17760 / NCIB 9086 SOURCE 4 / R18194); SOURCE 5 ORGANISM_TAXID: 269483; SOURCE 6 STRAIN: 383; SOURCE 7 GENE: BCEP18194_B1568; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 10 EXPRESSION_SYSTEM_STRAIN: ROSETTA2(DE3) PLYSS; SOURCE 11 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS CHIRALITY, DRUG DESIGN, PHENAZINE BIOSYNTHESIS, RACEMATE, RACEMIC KEYWDS 2 MIXTURE, BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.MENTEL,R.BREINBAUER,W.BLANKENFELDT REVDAT 4 21-FEB-24 3JUN 1 REMARK SEQADV REVDAT 3 13-JUL-11 3JUN 1 VERSN REVDAT 2 17-NOV-09 3JUN 1 JRNL REVDAT 1 29-SEP-09 3JUN 0 JRNL AUTH M.MENTEL,W.BLANKENFELDT,R.BREINBAUER JRNL TITL THE ACTIVE SITE OF AN ENZYME CAN HOST BOTH ENANTIOMERS OF A JRNL TITL 2 RACEMIC LIGAND SIMULTANEOUSLY JRNL REF ANGEW.CHEM.INT.ED.ENGL. V. 48 9084 2009 JRNL REFN ISSN 1433-7851 JRNL PMID 19876985 JRNL DOI 10.1002/ANIE.200902997 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH E.G.AHUJA,P.JANNING,A.GRAEBSCH,R.BREINBAUER,W.HILLER, REMARK 1 AUTH 2 B.COSTISELLA,L.S.THOMASHOW,D.V.MAVRODI,W.BLANKENFELDT REMARK 1 TITL PHZA/B CATALYZES THE FORMATION OF THE TRICYCLE IN PHENAZINE REMARK 1 TITL 2 BIOSYNTHESIS REMARK 1 REF J.AM.CHEM.SOC. V. 130 17053 2008 REMARK 1 REFN ISSN 0002-7863 REMARK 1 PMID 19053436 REMARK 1 DOI 10.1021/JA806325K REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.70 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 37044 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1837 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2543 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.96 REMARK 3 BIN R VALUE (WORKING SET) : 0.1980 REMARK 3 BIN FREE R VALUE SET COUNT : 136 REMARK 3 BIN FREE R VALUE : 0.2530 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2538 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 68 REMARK 3 SOLVENT ATOMS : 165 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 37.23 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.73 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.072 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.105 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2684 ; 0.026 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 1926 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3626 ; 1.927 ; 1.932 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4514 ; 0.984 ; 3.005 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 302 ; 6.238 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 156 ;36.444 ;22.692 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 428 ;14.531 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 32 ;17.423 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 346 ; 0.132 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3028 ; 0.012 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 628 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 158 ; 0.216 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 8 ; 0.298 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 28 ; 0.403 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 6 ; 0.302 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1505 ; 1.356 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 619 ; 0.473 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2419 ; 2.404 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1179 ; 3.732 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1207 ; 5.952 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 12 A 162 REMARK 3 RESIDUE RANGE : A 500 A 600 REMARK 3 RESIDUE RANGE : A 166 A 243 REMARK 3 ORIGIN FOR THE GROUP (A): 42.9227 0.5138 87.2270 REMARK 3 T TENSOR REMARK 3 T11: 0.0434 T22: 0.0822 REMARK 3 T33: 0.0416 T12: 0.0269 REMARK 3 T13: -0.0136 T23: 0.0074 REMARK 3 L TENSOR REMARK 3 L11: 1.0254 L22: 1.2394 REMARK 3 L33: 1.8278 L12: 0.0260 REMARK 3 L13: -0.0660 L23: -0.5369 REMARK 3 S TENSOR REMARK 3 S11: 0.0050 S12: -0.0544 S13: -0.0008 REMARK 3 S21: 0.0602 S22: -0.0740 S23: -0.2248 REMARK 3 S31: 0.0616 S32: 0.0746 S33: 0.0690 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 8 B 160 REMARK 3 RESIDUE RANGE : B 500 B 600 REMARK 3 RESIDUE RANGE : B 166 B 252 REMARK 3 ORIGIN FOR THE GROUP (A): 29.8471 10.9635 72.3272 REMARK 3 T TENSOR REMARK 3 T11: 0.0650 T22: 0.1211 REMARK 3 T33: 0.0215 T12: 0.0311 REMARK 3 T13: -0.0047 T23: 0.0294 REMARK 3 L TENSOR REMARK 3 L11: 0.8361 L22: 1.5097 REMARK 3 L33: 1.2509 L12: -0.1850 REMARK 3 L13: 0.3705 L23: -0.4318 REMARK 3 S TENSOR REMARK 3 S11: -0.0332 S12: 0.0711 S13: 0.0819 REMARK 3 S21: -0.1455 S22: 0.1156 S23: 0.0482 REMARK 3 S31: -0.0290 S32: -0.1875 S33: -0.0824 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : NULL REMARK 3 ION PROBE RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3JUN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-SEP-09. REMARK 100 THE DEPOSITION ID IS D_1000055180. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-OCT-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.1 - 6.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.98407 REMARK 200 MONOCHROMATOR : SI(111) MONOCHROMATOR REMARK 200 OPTICS : SI(111) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37044 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 19.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.44200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.59 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 16-20% (W/V) PEG3350, 0.2 M NH4OAC, REMARK 280 0.1 M BIS-TRIS PH 6.1-6.7; COMPLEX PREPARED BY OVERNIGHT SOAKING REMARK 280 IN MOTHER LIQUOR CONTAINING 4 MM RACEMIC 5-BROMO-2-(PIPERIDIN-3- REMARK 280 YLAMINO)BENZOIC ACID, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 284K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 107.54000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 53.77000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 53.77000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 107.54000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS THE SAME AS ASYM. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3640 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14780 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ASP A 3 REMARK 465 VAL A 4 REMARK 465 GLU A 5 REMARK 465 SER A 6 REMARK 465 LEU A 7 REMARK 465 GLU A 8 REMARK 465 ASN A 9 REMARK 465 THR A 10 REMARK 465 SER A 11 REMARK 465 LEU A 163 REMARK 465 PRO A 164 REMARK 465 SER A 165 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 ASP B 3 REMARK 465 VAL B 4 REMARK 465 GLU B 5 REMARK 465 SER B 6 REMARK 465 LEU B 7 REMARK 465 ASP B 161 REMARK 465 GLY B 162 REMARK 465 LEU B 163 REMARK 465 PRO B 164 REMARK 465 SER B 165 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 12 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP B 48 NZ LYS B 136 1.83 REMARK 500 O HOH A 200 O HOH A 213 1.97 REMARK 500 O HOH B 180 O HOH B 192 1.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG A 105 CG ARG A 105 CD -0.164 REMARK 500 GLU A 107 CB GLU A 107 CG -0.115 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 34 NE - CZ - NH2 ANGL. DEV. = -5.7 DEGREES REMARK 500 ASP A 83 CB - CG - OD1 ANGL. DEV. = 9.7 DEGREES REMARK 500 ARG A 149 CG - CD - NE ANGL. DEV. = -13.4 DEGREES REMARK 500 ARG A 149 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 ASP B 83 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ASP B 83 CB - CG - OD2 ANGL. DEV. = -5.5 DEGREES REMARK 500 ARG B 105 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG B 149 NE - CZ - NH1 ANGL. DEV. = 4.1 DEGREES REMARK 500 ARG B 149 NE - CZ - NH2 ANGL. DEV. = -4.6 DEGREES REMARK 500 ARG B 160 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 161 -48.26 47.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AJD A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AKD A 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AJD B 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AKD B 600 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3JUM RELATED DB: PDB REMARK 900 RELATED ID: 3JUO RELATED DB: PDB REMARK 900 RELATED ID: 3JUP RELATED DB: PDB REMARK 900 RELATED ID: 3JUQ RELATED DB: PDB REMARK 900 RELATED ID: 3BO4 RELATED DB: PDB REMARK 900 RELATED ID: 3CNM RELATED DB: PDB REMARK 900 RELATED ID: 3DZL RELATED DB: PDB REMARK 900 RELATED ID: 3B4P RELATED DB: PDB REMARK 900 RELATED ID: 3EX9 RELATED DB: PDB DBREF 3JUN A 1 165 UNP Q396C9 Q396C9_BURS3 1 165 DBREF 3JUN B 1 165 UNP Q396C9 Q396C9_BURS3 1 165 SEQADV 3JUN MET A -19 UNP Q396C9 EXPRESSION TAG SEQADV 3JUN GLY A -18 UNP Q396C9 EXPRESSION TAG SEQADV 3JUN SER A -17 UNP Q396C9 EXPRESSION TAG SEQADV 3JUN SER A -16 UNP Q396C9 EXPRESSION TAG SEQADV 3JUN HIS A -15 UNP Q396C9 EXPRESSION TAG SEQADV 3JUN HIS A -14 UNP Q396C9 EXPRESSION TAG SEQADV 3JUN HIS A -13 UNP Q396C9 EXPRESSION TAG SEQADV 3JUN HIS A -12 UNP Q396C9 EXPRESSION TAG SEQADV 3JUN HIS A -11 UNP Q396C9 EXPRESSION TAG SEQADV 3JUN HIS A -10 UNP Q396C9 EXPRESSION TAG SEQADV 3JUN SER A -9 UNP Q396C9 EXPRESSION TAG SEQADV 3JUN SER A -8 UNP Q396C9 EXPRESSION TAG SEQADV 3JUN GLY A -7 UNP Q396C9 EXPRESSION TAG SEQADV 3JUN LEU A -6 UNP Q396C9 EXPRESSION TAG SEQADV 3JUN VAL A -5 UNP Q396C9 EXPRESSION TAG SEQADV 3JUN PRO A -4 UNP Q396C9 EXPRESSION TAG SEQADV 3JUN ARG A -3 UNP Q396C9 EXPRESSION TAG SEQADV 3JUN GLY A -2 UNP Q396C9 EXPRESSION TAG SEQADV 3JUN SER A -1 UNP Q396C9 EXPRESSION TAG SEQADV 3JUN HIS A 0 UNP Q396C9 EXPRESSION TAG SEQADV 3JUN MET B -19 UNP Q396C9 EXPRESSION TAG SEQADV 3JUN GLY B -18 UNP Q396C9 EXPRESSION TAG SEQADV 3JUN SER B -17 UNP Q396C9 EXPRESSION TAG SEQADV 3JUN SER B -16 UNP Q396C9 EXPRESSION TAG SEQADV 3JUN HIS B -15 UNP Q396C9 EXPRESSION TAG SEQADV 3JUN HIS B -14 UNP Q396C9 EXPRESSION TAG SEQADV 3JUN HIS B -13 UNP Q396C9 EXPRESSION TAG SEQADV 3JUN HIS B -12 UNP Q396C9 EXPRESSION TAG SEQADV 3JUN HIS B -11 UNP Q396C9 EXPRESSION TAG SEQADV 3JUN HIS B -10 UNP Q396C9 EXPRESSION TAG SEQADV 3JUN SER B -9 UNP Q396C9 EXPRESSION TAG SEQADV 3JUN SER B -8 UNP Q396C9 EXPRESSION TAG SEQADV 3JUN GLY B -7 UNP Q396C9 EXPRESSION TAG SEQADV 3JUN LEU B -6 UNP Q396C9 EXPRESSION TAG SEQADV 3JUN VAL B -5 UNP Q396C9 EXPRESSION TAG SEQADV 3JUN PRO B -4 UNP Q396C9 EXPRESSION TAG SEQADV 3JUN ARG B -3 UNP Q396C9 EXPRESSION TAG SEQADV 3JUN GLY B -2 UNP Q396C9 EXPRESSION TAG SEQADV 3JUN SER B -1 UNP Q396C9 EXPRESSION TAG SEQADV 3JUN HIS B 0 UNP Q396C9 EXPRESSION TAG SEQRES 1 A 185 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 185 LEU VAL PRO ARG GLY SER HIS MET SER ASP VAL GLU SER SEQRES 3 A 185 LEU GLU ASN THR SER GLU ASN ARG ALA GLN VAL ALA ALA SEQRES 4 A 185 ARG GLN HIS ASN ARG LYS ILE VAL GLU GLN TYR MET HIS SEQRES 5 A 185 THR ARG GLY GLU ALA ARG LEU LYS ARG HIS LEU LEU PHE SEQRES 6 A 185 THR GLU ASP GLY VAL GLY GLY LEU TRP THR THR ASP SER SEQRES 7 A 185 GLY GLN PRO ILE ALA ILE ARG GLY ARG GLU LYS LEU GLY SEQRES 8 A 185 GLU HIS ALA VAL TRP SER LEU GLN CYS PHE PRO ASP TRP SEQRES 9 A 185 VAL TRP THR ASP ILE GLN ILE PHE GLU THR GLN ASP PRO SEQRES 10 A 185 ASN TRP PHE TRP VAL GLU CYS ARG GLY GLU GLY ALA ILE SEQRES 11 A 185 VAL PHE PRO GLY TYR PRO ARG GLY GLN TYR ARG ASN HIS SEQRES 12 A 185 PHE LEU HIS SER PHE ARG PHE GLU ASN GLY LEU ILE LYS SEQRES 13 A 185 GLU GLN ARG GLU PHE MET ASN PRO CYS GLU GLN PHE ARG SEQRES 14 A 185 SER LEU GLY ILE GLU VAL PRO GLU VAL ARG ARG ASP GLY SEQRES 15 A 185 LEU PRO SER SEQRES 1 B 185 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 185 LEU VAL PRO ARG GLY SER HIS MET SER ASP VAL GLU SER SEQRES 3 B 185 LEU GLU ASN THR SER GLU ASN ARG ALA GLN VAL ALA ALA SEQRES 4 B 185 ARG GLN HIS ASN ARG LYS ILE VAL GLU GLN TYR MET HIS SEQRES 5 B 185 THR ARG GLY GLU ALA ARG LEU LYS ARG HIS LEU LEU PHE SEQRES 6 B 185 THR GLU ASP GLY VAL GLY GLY LEU TRP THR THR ASP SER SEQRES 7 B 185 GLY GLN PRO ILE ALA ILE ARG GLY ARG GLU LYS LEU GLY SEQRES 8 B 185 GLU HIS ALA VAL TRP SER LEU GLN CYS PHE PRO ASP TRP SEQRES 9 B 185 VAL TRP THR ASP ILE GLN ILE PHE GLU THR GLN ASP PRO SEQRES 10 B 185 ASN TRP PHE TRP VAL GLU CYS ARG GLY GLU GLY ALA ILE SEQRES 11 B 185 VAL PHE PRO GLY TYR PRO ARG GLY GLN TYR ARG ASN HIS SEQRES 12 B 185 PHE LEU HIS SER PHE ARG PHE GLU ASN GLY LEU ILE LYS SEQRES 13 B 185 GLU GLN ARG GLU PHE MET ASN PRO CYS GLU GLN PHE ARG SEQRES 14 B 185 SER LEU GLY ILE GLU VAL PRO GLU VAL ARG ARG ASP GLY SEQRES 15 B 185 LEU PRO SER HET AJD A 500 17 HET AKD A 600 17 HET AJD B 500 17 HET AKD B 600 17 HETNAM AJD 5-BROMO-2-[(3R)-PIPERIDIN-3-YLAMINO]BENZOIC ACID HETNAM AKD 5-BROMO-2-[(3S)-PIPERIDIN-3-YLAMINO]BENZOATE FORMUL 3 AJD 2(C12 H15 BR N2 O2) FORMUL 4 AKD 2(C12 H14 BR N2 O2 1-) FORMUL 7 HOH *165(H2 O) HELIX 1 1 GLU A 12 HIS A 32 1 21 HELIX 2 2 ARG A 34 LEU A 43 5 10 HELIX 3 3 GLY A 66 PHE A 81 1 16 HELIX 4 4 ASN A 143 LEU A 151 1 9 HELIX 5 5 THR B 10 THR B 33 1 24 HELIX 6 6 ARG B 34 LEU B 43 5 10 HELIX 7 7 GLY B 66 PHE B 81 1 16 HELIX 8 8 ASN B 143 LEU B 151 1 9 SHEET 1 A 6 ILE A 62 ARG A 65 0 SHEET 2 A 6 PHE A 45 LEU A 53 -1 N GLY A 51 O ILE A 64 SHEET 3 A 6 LEU A 134 PHE A 141 1 O ILE A 135 N THR A 46 SHEET 4 A 6 GLY A 118 GLU A 131 -1 N LEU A 125 O PHE A 141 SHEET 5 A 6 TRP A 99 ILE A 110 -1 N CYS A 104 O PHE A 124 SHEET 6 A 6 VAL A 85 GLU A 93 -1 N PHE A 92 O TRP A 101 SHEET 1 B 6 ILE B 62 ARG B 65 0 SHEET 2 B 6 PHE B 45 LEU B 53 -1 N GLY B 51 O ILE B 64 SHEET 3 B 6 LEU B 134 MET B 142 1 O ILE B 135 N THR B 46 SHEET 4 B 6 GLY B 118 GLU B 131 -1 N LEU B 125 O PHE B 141 SHEET 5 B 6 TRP B 99 ILE B 110 -1 N GLY B 108 O TYR B 120 SHEET 6 B 6 VAL B 85 GLU B 93 -1 N PHE B 92 O TRP B 101 SITE 1 AC1 14 ARG A 38 ARG A 41 LEU A 70 HIS A 73 SITE 2 AC1 14 ALA A 74 SER A 77 PHE A 81 TRP A 84 SITE 3 AC1 14 GLU A 140 HOH A 184 HOH A 220 HOH A 237 SITE 4 AC1 14 HOH A 242 AKD A 600 SITE 1 AC2 9 GLY A 52 CYS A 80 PHE A 81 PHE A 112 SITE 2 AC2 9 GLN A 147 HOH A 172 HOH A 192 AJD A 500 SITE 3 AC2 9 ARG B 160 SITE 1 AC3 12 ARG B 38 ARG B 41 LEU B 70 HIS B 73 SITE 2 AC3 12 ALA B 74 SER B 77 PHE B 81 TRP B 84 SITE 3 AC3 12 GLU B 140 HOH B 198 HOH B 229 AKD B 600 SITE 1 AC4 9 ARG A 160 HOH A 210 GLY B 52 CYS B 80 SITE 2 AC4 9 PHE B 81 PHE B 112 GLN B 147 HOH B 178 SITE 3 AC4 9 AJD B 500 CRYST1 64.660 64.660 161.310 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015466 0.008929 0.000000 0.00000 SCALE2 0.000000 0.017858 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006199 0.00000