HEADER ISOMERASE 21-SEP-09 3JXV TITLE CRYSTAL STRUCTURE OF THE 3 FKBP DOMAINS OF WHEAT FKBP73 COMPND MOL_ID: 1; COMPND 2 MOLECULE: 70 KDA PEPTIDYL-PROLYL ISOMERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PEPTIDYL-PROLYL CIS-TRANS ISOMERASE, PPIASE, ROTAMASE; COMPND 5 EC: 5.2.1.8; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRITICUM AESTIVUM; SOURCE 3 ORGANISM_COMMON: WHEAT; SOURCE 4 ORGANISM_TAXID: 4565; SOURCE 5 GENE: FKBP70; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS FKBP- BINDING DOMAIN FIVE-STRANDED ANTI-PARALLEL BETA-SHEET AND AN KEYWDS 2 ALPHA-HELIX CROSSING THIS SHEET, STRUCTURAL GENOMICS, ISRAEL KEYWDS 3 STRUCTURAL PROTEOMICS CENTER, ISPC, CALMODULIN-BINDING, ISOMERASE, KEYWDS 4 ROTAMASE, STRESS RESPONSE, TPR REPEAT EXPDTA X-RAY DIFFRACTION AUTHOR O.DYM,A.BREIMAN,ISRAEL STRUCTURAL PROTEOMICS CENTER (ISPC) REVDAT 3 21-FEB-24 3JXV 1 REMARK REVDAT 2 30-JUN-10 3JXV 1 JRNL REVDAT 1 16-JUN-10 3JXV 0 JRNL AUTH T.UNGER,O.DYM,S.ALBECK,Y.JACOBOVITCH,R.BERNEHIM,D.MAROM, JRNL AUTH 2 O.PISANTY,A.BREIMAN JRNL TITL CRYSTAL STRUCTURE OF THE THREE FK506 BINDING PROTEIN DOMAINS JRNL TITL 2 OF WHEAT FKBP73: EVIDENCE FOR A UNIQUE WFK73_2 DOMAIN. JRNL REF J STRUCT FUNCT GENOMICS V. 11 113 2010 JRNL REFN JRNL PMID 20306145 JRNL DOI 10.1007/S10969-010-9085-8 REMARK 2 REMARK 2 RESOLUTION. 2.08 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.4.0067 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.08 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.80 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 23753 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.251 REMARK 3 R VALUE (WORKING SET) : 0.248 REMARK 3 FREE R VALUE : 0.287 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1271 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.08 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.13 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1347 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 77.48 REMARK 3 BIN R VALUE (WORKING SET) : 0.2370 REMARK 3 BIN FREE R VALUE SET COUNT : 67 REMARK 3 BIN FREE R VALUE : 0.2950 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1825 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 38 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.91 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.13000 REMARK 3 B22 (A**2) : 2.11000 REMARK 3 B33 (A**2) : -1.36000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.27000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.178 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.171 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.105 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.693 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.919 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.896 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1856 ; 0.027 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2503 ; 2.352 ; 1.994 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 235 ; 9.281 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 74 ;36.267 ;26.216 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 350 ;18.092 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 5 ;16.544 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 284 ; 0.238 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1357 ; 0.011 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1174 ; 1.544 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1899 ; 2.677 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 682 ; 4.460 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 604 ; 7.723 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3JXV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-SEP-09. REMARK 100 THE DEPOSITION ID IS D_1000055296. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-NOV-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25033 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 30.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : 0.06200 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 54.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.3 REMARK 200 DATA REDUNDANCY IN SHELL : 5.20 REMARK 200 R MERGE FOR SHELL (I) : 0.24300 REMARK 200 R SYM FOR SHELL (I) : 0.24600 REMARK 200 <I/SIGMA(I)> FOR SHELL : 6.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.65 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M KNO3 0.1 BIS TRIXPROPANE PH=8.5 REMARK 280 20% PEG 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 292K, REMARK 280 PH 8.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 15.66100 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 31 REMARK 465 VAL A 32 REMARK 465 GLY A 33 REMARK 465 GLU A 34 REMARK 465 GLU A 35 REMARK 465 ASN A 36 REMARK 465 GLU A 37 REMARK 465 ILE A 38 REMARK 465 GLY A 39 REMARK 465 LYS A 40 REMARK 465 GLN A 41 REMARK 465 GLY A 42 REMARK 465 LEU A 43 REMARK 465 LYS A 44 REMARK 465 LYS A 45 REMARK 465 LYS A 46 REMARK 465 LEU A 47 REMARK 465 LEU A 48 REMARK 465 LYS A 49 REMARK 465 GLU A 50 REMARK 465 GLY A 51 REMARK 465 GLU A 52 REMARK 465 GLY A 53 REMARK 465 TRP A 54 REMARK 465 ASP A 55 REMARK 465 THR A 56 REMARK 465 PRO A 57 REMARK 465 GLU A 58 REMARK 465 VAL A 59 REMARK 465 GLY A 60 REMARK 465 ASP A 61 REMARK 465 GLU A 62 REMARK 465 VAL A 63 REMARK 465 GLU A 64 REMARK 465 VAL A 65 REMARK 465 HIS A 66 REMARK 465 TYR A 67 REMARK 465 THR A 68 REMARK 465 GLY A 69 REMARK 465 THR A 70 REMARK 465 LEU A 71 REMARK 465 LEU A 72 REMARK 465 ASP A 73 REMARK 465 GLY A 74 REMARK 465 LYS A 75 REMARK 465 LYS A 76 REMARK 465 PHE A 77 REMARK 465 ASP A 78 REMARK 465 SER A 79 REMARK 465 SER A 80 REMARK 465 ARG A 81 REMARK 465 ASP A 82 REMARK 465 ARG A 83 REMARK 465 ASP A 84 REMARK 465 ASP A 85 REMARK 465 THR A 86 REMARK 465 PHE A 87 REMARK 465 LYS A 88 REMARK 465 PHE A 89 REMARK 465 LYS A 90 REMARK 465 LEU A 91 REMARK 465 GLY A 92 REMARK 465 GLN A 93 REMARK 465 GLY A 94 REMARK 465 GLN A 95 REMARK 465 VAL A 96 REMARK 465 ILE A 97 REMARK 465 LYS A 98 REMARK 465 GLY A 99 REMARK 465 TRP A 100 REMARK 465 ASP A 101 REMARK 465 GLN A 102 REMARK 465 GLY A 103 REMARK 465 ILE A 104 REMARK 465 LYS A 105 REMARK 465 THR A 106 REMARK 465 MET A 107 REMARK 465 LYS A 108 REMARK 465 LYS A 109 REMARK 465 GLY A 110 REMARK 465 GLU A 111 REMARK 465 ASN A 112 REMARK 465 ALA A 113 REMARK 465 LEU A 114 REMARK 465 PHE A 115 REMARK 465 THR A 116 REMARK 465 ILE A 117 REMARK 465 PRO A 118 REMARK 465 PRO A 119 REMARK 465 GLU A 120 REMARK 465 LEU A 121 REMARK 465 ALA A 122 REMARK 465 TYR A 123 REMARK 465 GLY A 124 REMARK 465 GLU A 125 REMARK 465 SER A 126 REMARK 465 GLY A 127 REMARK 465 SER A 128 REMARK 465 PRO A 129 REMARK 465 PRO A 130 REMARK 465 THR A 131 REMARK 465 ILE A 132 REMARK 465 PRO A 133 REMARK 465 ALA A 134 REMARK 465 ASN A 135 REMARK 465 ALA A 136 REMARK 465 THR A 137 REMARK 465 LEU A 138 REMARK 465 GLN A 139 REMARK 465 PHE A 140 REMARK 465 ASP A 141 REMARK 465 VAL A 142 REMARK 465 GLU A 143 REMARK 465 LEU A 144 REMARK 465 LEU A 145 REMARK 465 SER A 146 REMARK 465 TRP A 147 REMARK 465 GLU A 245 REMARK 465 GLY A 246 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 273 OH TYR A 355 1.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLY A 307 N GLY A 307 CA 0.097 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 306 O - C - N ANGL. DEV. = -10.5 DEGREES REMARK 500 GLY A 307 C - N - CA ANGL. DEV. = -22.6 DEGREES REMARK 500 VAL A 374 CG1 - CB - CG2 ANGL. DEV. = 13.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 169 -163.94 87.68 REMARK 500 LEU A 208 -66.44 72.30 REMARK 500 ALA A 243 -50.24 163.78 REMARK 500 TYR A 287 133.48 39.44 REMARK 500 GLU A 288 131.05 105.70 REMARK 500 ALA A 356 -112.79 -131.75 REMARK 500 GLN A 364 -144.59 -119.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU A 285 GLY A 286 -108.86 REMARK 500 REMARK 500 REMARK: NULL DBREF 3JXV A 31 386 UNP Q43207 FKB70_WHEAT 31 386 SEQRES 1 A 356 LYS VAL GLY GLU GLU ASN GLU ILE GLY LYS GLN GLY LEU SEQRES 2 A 356 LYS LYS LYS LEU LEU LYS GLU GLY GLU GLY TRP ASP THR SEQRES 3 A 356 PRO GLU VAL GLY ASP GLU VAL GLU VAL HIS TYR THR GLY SEQRES 4 A 356 THR LEU LEU ASP GLY LYS LYS PHE ASP SER SER ARG ASP SEQRES 5 A 356 ARG ASP ASP THR PHE LYS PHE LYS LEU GLY GLN GLY GLN SEQRES 6 A 356 VAL ILE LYS GLY TRP ASP GLN GLY ILE LYS THR MET LYS SEQRES 7 A 356 LYS GLY GLU ASN ALA LEU PHE THR ILE PRO PRO GLU LEU SEQRES 8 A 356 ALA TYR GLY GLU SER GLY SER PRO PRO THR ILE PRO ALA SEQRES 9 A 356 ASN ALA THR LEU GLN PHE ASP VAL GLU LEU LEU SER TRP SEQRES 10 A 356 THR SER VAL ARG ASP ILE ALA LYS ASP GLY GLY ILE PHE SEQRES 11 A 356 LYS LYS ILE LEU LYS GLU GLY ASP LYS TRP GLU ASN PRO SEQRES 12 A 356 LYS ASP PRO ASP GLU VAL PHE VAL LYS TYR GLU ALA ARG SEQRES 13 A 356 LEU GLU ASP GLY THR VAL VAL SER LYS SER GLU GLY VAL SEQRES 14 A 356 GLU PHE THR VAL LYS ASP GLY HIS LEU CYS PRO ALA LEU SEQRES 15 A 356 ALA LYS ALA VAL LYS THR MET LYS LYS GLY GLU LYS VAL SEQRES 16 A 356 LEU LEU ALA VAL LYS PRO GLN TYR GLY PHE GLY GLU MET SEQRES 17 A 356 GLY ARG PRO ALA ALA GLY GLU GLY GLY ALA VAL PRO PRO SEQRES 18 A 356 ASN ALA SER LEU VAL ILE ASP LEU GLU LEU VAL SER TRP SEQRES 19 A 356 LYS THR VAL THR GLU ILE GLY ASP ASP LYS LYS ILE LEU SEQRES 20 A 356 LYS LYS VAL LEU LYS GLU UNK GLU GLY TYR GLU ARG PRO SEQRES 21 A 356 ASN GLU GLY ALA VAL VAL THR VAL LYS ILE THR GLY LYS SEQRES 22 A 356 LEU GLN ASP GLY THR VAL PHE LEU LYS LYS GLY HIS ASP SEQRES 23 A 356 GLU GLN GLU PRO PHE GLU PHE LYS THR ASP GLU GLU ALA SEQRES 24 A 356 VAL ILE GLU GLY LEU ASP ARG ALA VAL LEU ASN MET LYS SEQRES 25 A 356 LYS GLY GLU VAL ALA LEU VAL THR ILE PRO PRO GLU TYR SEQRES 26 A 356 ALA TYR GLY SER THR GLU SER LYS GLN ASP ALA ILE VAL SEQRES 27 A 356 PRO PRO ASN SER THR VAL ILE TYR GLU VAL GLU LEU VAL SEQRES 28 A 356 SER PHE VAL LYS ASP FORMUL 2 HOH *38(H2 O) HELIX 1 1 LYS A 204 GLY A 206 5 3 HELIX 2 2 CYS A 209 LYS A 217 1 9 HELIX 3 3 PRO A 231 GLY A 234 5 4 HELIX 4 4 ILE A 331 LEU A 339 1 9 HELIX 5 5 PRO A 352 ALA A 356 5 5 SHEET 1 A 6 VAL A 150 ASP A 152 0 SHEET 2 A 6 ILE A 159 LYS A 165 -1 O LYS A 161 N ARG A 151 SHEET 3 A 6 LYS A 224 VAL A 229 -1 O LEU A 226 N LYS A 162 SHEET 4 A 6 LEU A 255 LYS A 265 -1 O LEU A 259 N VAL A 225 SHEET 5 A 6 GLU A 178 LEU A 187 -1 N ARG A 186 O VAL A 256 SHEET 6 A 6 VAL A 192 THR A 202 -1 O SER A 194 N ALA A 185 SHEET 1 B 6 VAL A 267 ILE A 270 0 SHEET 2 B 6 ILE A 276 LYS A 282 -1 O ILE A 276 N ILE A 270 SHEET 3 B 6 VAL A 346 ILE A 351 -1 O LEU A 348 N LYS A 279 SHEET 4 B 6 VAL A 374 VAL A 384 -1 O TYR A 376 N VAL A 349 SHEET 5 B 6 VAL A 295 LEU A 304 -1 N LYS A 303 O ILE A 375 SHEET 6 B 6 VAL A 309 LYS A 313 -1 O PHE A 310 N GLY A 302 SHEET 1 C 6 VAL A 267 ILE A 270 0 SHEET 2 C 6 ILE A 276 LYS A 282 -1 O ILE A 276 N ILE A 270 SHEET 3 C 6 VAL A 346 ILE A 351 -1 O LEU A 348 N LYS A 279 SHEET 4 C 6 VAL A 374 VAL A 384 -1 O TYR A 376 N VAL A 349 SHEET 5 C 6 VAL A 295 LEU A 304 -1 N LYS A 303 O ILE A 375 SHEET 6 C 6 GLU A 322 LYS A 324 -1 O PHE A 323 N VAL A 296 SHEET 1 D 2 SER A 362 LYS A 363 0 SHEET 2 D 2 ILE A 367 VAL A 368 -1 O VAL A 368 N SER A 362 CRYST1 69.168 31.322 96.716 90.00 98.46 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014458 0.000000 0.002150 0.00000 SCALE2 0.000000 0.031926 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010453 0.00000