data_3JYC # _entry.id 3JYC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3JYC pdb_00003jyc 10.2210/pdb3jyc/pdb RCSB RCSB055313 ? ? WWPDB D_1000055313 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-01-12 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-09-06 4 'Structure model' 1 3 2024-10-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' 6 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_conn 6 3 'Structure model' struct_site 7 4 'Structure model' pdbx_entry_details 8 4 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_conn.pdbx_dist_value' 4 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 5 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 6 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 7 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 8 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 9 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 10 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 11 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 12 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 13 3 'Structure model' '_struct_site.pdbx_auth_seq_id' 14 4 'Structure model' '_pdbx_entry_details.has_protein_modification' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3JYC _pdbx_database_status.recvd_initial_deposition_date 2009-09-21 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _audit_author.name 'Tao, X.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of the eukaryotic strong inward-rectifier K+ channel Kir2.2 at 3.1 A resolution.' _citation.journal_abbrev Science _citation.journal_volume 326 _citation.page_first 1668 _citation.page_last 1674 _citation.year 2009 _citation.journal_id_ASTM SCIEAS _citation.country US _citation.journal_id_ISSN 0036-8075 _citation.journal_id_CSD 0038 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20019282 _citation.pdbx_database_id_DOI 10.1126/science.1180310 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tao, X.' 1 ? primary 'Avalos, J.L.' 2 ? primary 'Chen, J.' 3 ? primary 'MacKinnon, R.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Inward-rectifier K+ channel Kir2.2' 39361.723 1 ? ? ? ? 2 non-polymer syn 'POTASSIUM ION' 39.098 5 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MARRKCRNRFVKKNGQCNVEFTNMDDKPQRYIADMFTTCVDIRWRYMLLLFSLAFLVSWLLFGLIFWLIALIHGDLENPG GDDTFKPCVLQVNGFVAAFLFSIETQTTIGYGFRCVTEECPLAVFMVVVQSIVGCIIDSFMIGAIMAKMARPKKRAQTLL FSHNAVVAMRDGKLCLMWRVGNLRKSHIVEAHVRAQLIKPRITEEGEYIPLDQIDIDVGFDKGLDRIFLVSPITILHEIN EDSPLFGISRQDLETDDFEIVVILEGMVEATAMTTQARSSYLASEILWGHRFEPVLFEEKNQYKVDYSHFHKTYEVPSTP RCSAKDLVENKFLLSNSLEVLFQ ; _entity_poly.pdbx_seq_one_letter_code_can ;MARRKCRNRFVKKNGQCNVEFTNMDDKPQRYIADMFTTCVDIRWRYMLLLFSLAFLVSWLLFGLIFWLIALIHGDLENPG GDDTFKPCVLQVNGFVAAFLFSIETQTTIGYGFRCVTEECPLAVFMVVVQSIVGCIIDSFMIGAIMAKMARPKKRAQTLL FSHNAVVAMRDGKLCLMWRVGNLRKSHIVEAHVRAQLIKPRITEEGEYIPLDQIDIDVGFDKGLDRIFLVSPITILHEIN EDSPLFGISRQDLETDDFEIVVILEGMVEATAMTTQARSSYLASEILWGHRFEPVLFEEKNQYKVDYSHFHKTYEVPSTP RCSAKDLVENKFLLSNSLEVLFQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name 'POTASSIUM ION' _pdbx_entity_nonpoly.comp_id K # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 ARG n 1 4 ARG n 1 5 LYS n 1 6 CYS n 1 7 ARG n 1 8 ASN n 1 9 ARG n 1 10 PHE n 1 11 VAL n 1 12 LYS n 1 13 LYS n 1 14 ASN n 1 15 GLY n 1 16 GLN n 1 17 CYS n 1 18 ASN n 1 19 VAL n 1 20 GLU n 1 21 PHE n 1 22 THR n 1 23 ASN n 1 24 MET n 1 25 ASP n 1 26 ASP n 1 27 LYS n 1 28 PRO n 1 29 GLN n 1 30 ARG n 1 31 TYR n 1 32 ILE n 1 33 ALA n 1 34 ASP n 1 35 MET n 1 36 PHE n 1 37 THR n 1 38 THR n 1 39 CYS n 1 40 VAL n 1 41 ASP n 1 42 ILE n 1 43 ARG n 1 44 TRP n 1 45 ARG n 1 46 TYR n 1 47 MET n 1 48 LEU n 1 49 LEU n 1 50 LEU n 1 51 PHE n 1 52 SER n 1 53 LEU n 1 54 ALA n 1 55 PHE n 1 56 LEU n 1 57 VAL n 1 58 SER n 1 59 TRP n 1 60 LEU n 1 61 LEU n 1 62 PHE n 1 63 GLY n 1 64 LEU n 1 65 ILE n 1 66 PHE n 1 67 TRP n 1 68 LEU n 1 69 ILE n 1 70 ALA n 1 71 LEU n 1 72 ILE n 1 73 HIS n 1 74 GLY n 1 75 ASP n 1 76 LEU n 1 77 GLU n 1 78 ASN n 1 79 PRO n 1 80 GLY n 1 81 GLY n 1 82 ASP n 1 83 ASP n 1 84 THR n 1 85 PHE n 1 86 LYS n 1 87 PRO n 1 88 CYS n 1 89 VAL n 1 90 LEU n 1 91 GLN n 1 92 VAL n 1 93 ASN n 1 94 GLY n 1 95 PHE n 1 96 VAL n 1 97 ALA n 1 98 ALA n 1 99 PHE n 1 100 LEU n 1 101 PHE n 1 102 SER n 1 103 ILE n 1 104 GLU n 1 105 THR n 1 106 GLN n 1 107 THR n 1 108 THR n 1 109 ILE n 1 110 GLY n 1 111 TYR n 1 112 GLY n 1 113 PHE n 1 114 ARG n 1 115 CYS n 1 116 VAL n 1 117 THR n 1 118 GLU n 1 119 GLU n 1 120 CYS n 1 121 PRO n 1 122 LEU n 1 123 ALA n 1 124 VAL n 1 125 PHE n 1 126 MET n 1 127 VAL n 1 128 VAL n 1 129 VAL n 1 130 GLN n 1 131 SER n 1 132 ILE n 1 133 VAL n 1 134 GLY n 1 135 CYS n 1 136 ILE n 1 137 ILE n 1 138 ASP n 1 139 SER n 1 140 PHE n 1 141 MET n 1 142 ILE n 1 143 GLY n 1 144 ALA n 1 145 ILE n 1 146 MET n 1 147 ALA n 1 148 LYS n 1 149 MET n 1 150 ALA n 1 151 ARG n 1 152 PRO n 1 153 LYS n 1 154 LYS n 1 155 ARG n 1 156 ALA n 1 157 GLN n 1 158 THR n 1 159 LEU n 1 160 LEU n 1 161 PHE n 1 162 SER n 1 163 HIS n 1 164 ASN n 1 165 ALA n 1 166 VAL n 1 167 VAL n 1 168 ALA n 1 169 MET n 1 170 ARG n 1 171 ASP n 1 172 GLY n 1 173 LYS n 1 174 LEU n 1 175 CYS n 1 176 LEU n 1 177 MET n 1 178 TRP n 1 179 ARG n 1 180 VAL n 1 181 GLY n 1 182 ASN n 1 183 LEU n 1 184 ARG n 1 185 LYS n 1 186 SER n 1 187 HIS n 1 188 ILE n 1 189 VAL n 1 190 GLU n 1 191 ALA n 1 192 HIS n 1 193 VAL n 1 194 ARG n 1 195 ALA n 1 196 GLN n 1 197 LEU n 1 198 ILE n 1 199 LYS n 1 200 PRO n 1 201 ARG n 1 202 ILE n 1 203 THR n 1 204 GLU n 1 205 GLU n 1 206 GLY n 1 207 GLU n 1 208 TYR n 1 209 ILE n 1 210 PRO n 1 211 LEU n 1 212 ASP n 1 213 GLN n 1 214 ILE n 1 215 ASP n 1 216 ILE n 1 217 ASP n 1 218 VAL n 1 219 GLY n 1 220 PHE n 1 221 ASP n 1 222 LYS n 1 223 GLY n 1 224 LEU n 1 225 ASP n 1 226 ARG n 1 227 ILE n 1 228 PHE n 1 229 LEU n 1 230 VAL n 1 231 SER n 1 232 PRO n 1 233 ILE n 1 234 THR n 1 235 ILE n 1 236 LEU n 1 237 HIS n 1 238 GLU n 1 239 ILE n 1 240 ASN n 1 241 GLU n 1 242 ASP n 1 243 SER n 1 244 PRO n 1 245 LEU n 1 246 PHE n 1 247 GLY n 1 248 ILE n 1 249 SER n 1 250 ARG n 1 251 GLN n 1 252 ASP n 1 253 LEU n 1 254 GLU n 1 255 THR n 1 256 ASP n 1 257 ASP n 1 258 PHE n 1 259 GLU n 1 260 ILE n 1 261 VAL n 1 262 VAL n 1 263 ILE n 1 264 LEU n 1 265 GLU n 1 266 GLY n 1 267 MET n 1 268 VAL n 1 269 GLU n 1 270 ALA n 1 271 THR n 1 272 ALA n 1 273 MET n 1 274 THR n 1 275 THR n 1 276 GLN n 1 277 ALA n 1 278 ARG n 1 279 SER n 1 280 SER n 1 281 TYR n 1 282 LEU n 1 283 ALA n 1 284 SER n 1 285 GLU n 1 286 ILE n 1 287 LEU n 1 288 TRP n 1 289 GLY n 1 290 HIS n 1 291 ARG n 1 292 PHE n 1 293 GLU n 1 294 PRO n 1 295 VAL n 1 296 LEU n 1 297 PHE n 1 298 GLU n 1 299 GLU n 1 300 LYS n 1 301 ASN n 1 302 GLN n 1 303 TYR n 1 304 LYS n 1 305 VAL n 1 306 ASP n 1 307 TYR n 1 308 SER n 1 309 HIS n 1 310 PHE n 1 311 HIS n 1 312 LYS n 1 313 THR n 1 314 TYR n 1 315 GLU n 1 316 VAL n 1 317 PRO n 1 318 SER n 1 319 THR n 1 320 PRO n 1 321 ARG n 1 322 CYS n 1 323 SER n 1 324 ALA n 1 325 LYS n 1 326 ASP n 1 327 LEU n 1 328 VAL n 1 329 GLU n 1 330 ASN n 1 331 LYS n 1 332 PHE n 1 333 LEU n 1 334 LEU n 1 335 SER n 1 336 ASN n 1 337 SER n 1 338 LEU n 1 339 GLU n 1 340 VAL n 1 341 LEU n 1 342 PHE n 1 343 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name chicken _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Kir2.2 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Gallus gallus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9031 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Pichia pastoris' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 4922 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'SMD1163 His+' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pPICZ-B _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 36 ? ? ? A . n A 1 2 ALA 2 37 ? ? ? A . n A 1 3 ARG 3 38 ? ? ? A . n A 1 4 ARG 4 39 ? ? ? A . n A 1 5 LYS 5 40 ? ? ? A . n A 1 6 CYS 6 41 ? ? ? A . n A 1 7 ARG 7 42 ? ? ? A . n A 1 8 ASN 8 43 43 ASN ASN A . n A 1 9 ARG 9 44 44 ARG ARG A . n A 1 10 PHE 10 45 45 PHE PHE A . n A 1 11 VAL 11 46 46 VAL VAL A . n A 1 12 LYS 12 47 47 LYS LYS A . n A 1 13 LYS 13 48 48 LYS LYS A . n A 1 14 ASN 14 49 49 ASN ASN A . n A 1 15 GLY 15 50 50 GLY GLY A . n A 1 16 GLN 16 51 51 GLN GLN A . n A 1 17 CYS 17 52 52 CYS CYS A . n A 1 18 ASN 18 53 53 ASN ASN A . n A 1 19 VAL 19 54 54 VAL VAL A . n A 1 20 GLU 20 55 55 GLU GLU A . n A 1 21 PHE 21 56 56 PHE PHE A . n A 1 22 THR 22 57 57 THR THR A . n A 1 23 ASN 23 58 58 ASN ASN A . n A 1 24 MET 24 59 59 MET MET A . n A 1 25 ASP 25 60 60 ASP ASP A . n A 1 26 ASP 26 61 ? ? ? A . n A 1 27 LYS 27 62 ? ? ? A . n A 1 28 PRO 28 63 ? ? ? A . n A 1 29 GLN 29 64 ? ? ? A . n A 1 30 ARG 30 65 ? ? ? A . n A 1 31 TYR 31 66 ? ? ? A . n A 1 32 ILE 32 67 ? ? ? A . n A 1 33 ALA 33 68 ? ? ? A . n A 1 34 ASP 34 69 ? ? ? A . n A 1 35 MET 35 70 70 MET MET A . n A 1 36 PHE 36 71 71 PHE PHE A . n A 1 37 THR 37 72 72 THR ALA A . n A 1 38 THR 38 73 73 THR ALA A . n A 1 39 CYS 39 74 74 CYS ALA A . n A 1 40 VAL 40 75 75 VAL ALA A . n A 1 41 ASP 41 76 76 ASP ALA A . n A 1 42 ILE 42 77 77 ILE ALA A . n A 1 43 ARG 43 78 78 ARG ALA A . n A 1 44 TRP 44 79 79 TRP TRP A . n A 1 45 ARG 45 80 80 ARG ARG A . n A 1 46 TYR 46 81 81 TYR TYR A . n A 1 47 MET 47 82 82 MET MET A . n A 1 48 LEU 48 83 83 LEU LEU A . n A 1 49 LEU 49 84 84 LEU LEU A . n A 1 50 LEU 50 85 85 LEU LEU A . n A 1 51 PHE 51 86 86 PHE PHE A . n A 1 52 SER 52 87 87 SER SER A . n A 1 53 LEU 53 88 88 LEU LEU A . n A 1 54 ALA 54 89 89 ALA ALA A . n A 1 55 PHE 55 90 90 PHE PHE A . n A 1 56 LEU 56 91 91 LEU LEU A . n A 1 57 VAL 57 92 92 VAL VAL A . n A 1 58 SER 58 93 93 SER SER A . n A 1 59 TRP 59 94 94 TRP TRP A . n A 1 60 LEU 60 95 95 LEU LEU A . n A 1 61 LEU 61 96 96 LEU LEU A . n A 1 62 PHE 62 97 97 PHE PHE A . n A 1 63 GLY 63 98 98 GLY GLY A . n A 1 64 LEU 64 99 99 LEU LEU A . n A 1 65 ILE 65 100 100 ILE ILE A . n A 1 66 PHE 66 101 101 PHE PHE A . n A 1 67 TRP 67 102 102 TRP TRP A . n A 1 68 LEU 68 103 103 LEU LEU A . n A 1 69 ILE 69 104 104 ILE ILE A . n A 1 70 ALA 70 105 105 ALA ALA A . n A 1 71 LEU 71 106 106 LEU LEU A . n A 1 72 ILE 72 107 107 ILE ILE A . n A 1 73 HIS 73 108 108 HIS HIS A . n A 1 74 GLY 74 109 109 GLY GLY A . n A 1 75 ASP 75 110 110 ASP ASP A . n A 1 76 LEU 76 111 111 LEU LEU A . n A 1 77 GLU 77 112 112 GLU GLU A . n A 1 78 ASN 78 113 113 ASN ASN A . n A 1 79 PRO 79 114 114 PRO PRO A . n A 1 80 GLY 80 115 115 GLY GLY A . n A 1 81 GLY 81 116 116 GLY GLY A . n A 1 82 ASP 82 117 117 ASP ASP A . n A 1 83 ASP 83 118 118 ASP ASP A . n A 1 84 THR 84 119 119 THR THR A . n A 1 85 PHE 85 120 120 PHE PHE A . n A 1 86 LYS 86 121 121 LYS LYS A . n A 1 87 PRO 87 122 122 PRO PRO A . n A 1 88 CYS 88 123 123 CYS CYS A . n A 1 89 VAL 89 124 124 VAL VAL A . n A 1 90 LEU 90 125 125 LEU LEU A . n A 1 91 GLN 91 126 126 GLN GLN A . n A 1 92 VAL 92 127 127 VAL VAL A . n A 1 93 ASN 93 128 128 ASN ASN A . n A 1 94 GLY 94 129 129 GLY GLY A . n A 1 95 PHE 95 130 130 PHE PHE A . n A 1 96 VAL 96 131 131 VAL VAL A . n A 1 97 ALA 97 132 132 ALA ALA A . n A 1 98 ALA 98 133 133 ALA ALA A . n A 1 99 PHE 99 134 134 PHE PHE A . n A 1 100 LEU 100 135 135 LEU LEU A . n A 1 101 PHE 101 136 136 PHE PHE A . n A 1 102 SER 102 137 137 SER SER A . n A 1 103 ILE 103 138 138 ILE ILE A . n A 1 104 GLU 104 139 139 GLU GLU A . n A 1 105 THR 105 140 140 THR THR A . n A 1 106 GLN 106 141 141 GLN GLN A . n A 1 107 THR 107 142 142 THR THR A . n A 1 108 THR 108 143 143 THR THR A . n A 1 109 ILE 109 144 144 ILE ILE A . n A 1 110 GLY 110 145 145 GLY GLY A . n A 1 111 TYR 111 146 146 TYR TYR A . n A 1 112 GLY 112 147 147 GLY GLY A . n A 1 113 PHE 113 148 148 PHE PHE A . n A 1 114 ARG 114 149 149 ARG ARG A . n A 1 115 CYS 115 150 150 CYS CYS A . n A 1 116 VAL 116 151 151 VAL VAL A . n A 1 117 THR 117 152 152 THR THR A . n A 1 118 GLU 118 153 153 GLU GLU A . n A 1 119 GLU 119 154 154 GLU GLU A . n A 1 120 CYS 120 155 155 CYS CYS A . n A 1 121 PRO 121 156 156 PRO PRO A . n A 1 122 LEU 122 157 157 LEU LEU A . n A 1 123 ALA 123 158 158 ALA ALA A . n A 1 124 VAL 124 159 159 VAL VAL A . n A 1 125 PHE 125 160 160 PHE PHE A . n A 1 126 MET 126 161 161 MET MET A . n A 1 127 VAL 127 162 162 VAL VAL A . n A 1 128 VAL 128 163 163 VAL VAL A . n A 1 129 VAL 129 164 164 VAL VAL A . n A 1 130 GLN 130 165 165 GLN GLN A . n A 1 131 SER 131 166 166 SER SER A . n A 1 132 ILE 132 167 167 ILE ILE A . n A 1 133 VAL 133 168 168 VAL VAL A . n A 1 134 GLY 134 169 169 GLY GLY A . n A 1 135 CYS 135 170 170 CYS CYS A . n A 1 136 ILE 136 171 171 ILE ILE A . n A 1 137 ILE 137 172 172 ILE ILE A . n A 1 138 ASP 138 173 173 ASP ASP A . n A 1 139 SER 139 174 174 SER SER A . n A 1 140 PHE 140 175 175 PHE PHE A . n A 1 141 MET 141 176 176 MET MET A . n A 1 142 ILE 142 177 177 ILE ILE A . n A 1 143 GLY 143 178 178 GLY GLY A . n A 1 144 ALA 144 179 179 ALA ALA A . n A 1 145 ILE 145 180 180 ILE ILE A . n A 1 146 MET 146 181 181 MET MET A . n A 1 147 ALA 147 182 182 ALA ALA A . n A 1 148 LYS 148 183 183 LYS LYS A . n A 1 149 MET 149 184 184 MET MET A . n A 1 150 ALA 150 185 185 ALA ALA A . n A 1 151 ARG 151 186 186 ARG ARG A . n A 1 152 PRO 152 187 187 PRO PRO A . n A 1 153 LYS 153 188 188 LYS LYS A . n A 1 154 LYS 154 189 189 LYS LYS A . n A 1 155 ARG 155 190 190 ARG ARG A . n A 1 156 ALA 156 191 191 ALA ALA A . n A 1 157 GLN 157 192 192 GLN GLN A . n A 1 158 THR 158 193 193 THR THR A . n A 1 159 LEU 159 194 194 LEU LEU A . n A 1 160 LEU 160 195 195 LEU LEU A . n A 1 161 PHE 161 196 196 PHE PHE A . n A 1 162 SER 162 197 197 SER SER A . n A 1 163 HIS 163 198 198 HIS HIS A . n A 1 164 ASN 164 199 199 ASN ASN A . n A 1 165 ALA 165 200 200 ALA ALA A . n A 1 166 VAL 166 201 201 VAL VAL A . n A 1 167 VAL 167 202 202 VAL VAL A . n A 1 168 ALA 168 203 203 ALA ALA A . n A 1 169 MET 169 204 204 MET MET A . n A 1 170 ARG 170 205 205 ARG ARG A . n A 1 171 ASP 171 206 206 ASP ASP A . n A 1 172 GLY 172 207 207 GLY GLY A . n A 1 173 LYS 173 208 208 LYS LYS A . n A 1 174 LEU 174 209 209 LEU LEU A . n A 1 175 CYS 175 210 210 CYS CYS A . n A 1 176 LEU 176 211 211 LEU LEU A . n A 1 177 MET 177 212 212 MET MET A . n A 1 178 TRP 178 213 213 TRP TRP A . n A 1 179 ARG 179 214 214 ARG ARG A . n A 1 180 VAL 180 215 215 VAL VAL A . n A 1 181 GLY 181 216 216 GLY GLY A . n A 1 182 ASN 182 217 217 ASN ASN A . n A 1 183 LEU 183 218 218 LEU LEU A . n A 1 184 ARG 184 219 219 ARG ARG A . n A 1 185 LYS 185 220 220 LYS LYS A . n A 1 186 SER 186 221 221 SER SER A . n A 1 187 HIS 187 222 222 HIS HIS A . n A 1 188 ILE 188 223 223 ILE ILE A . n A 1 189 VAL 189 224 224 VAL VAL A . n A 1 190 GLU 190 225 225 GLU GLU A . n A 1 191 ALA 191 226 226 ALA ALA A . n A 1 192 HIS 192 227 227 HIS HIS A . n A 1 193 VAL 193 228 228 VAL VAL A . n A 1 194 ARG 194 229 229 ARG ARG A . n A 1 195 ALA 195 230 230 ALA ALA A . n A 1 196 GLN 196 231 231 GLN GLN A . n A 1 197 LEU 197 232 232 LEU LEU A . n A 1 198 ILE 198 233 233 ILE ILE A . n A 1 199 LYS 199 234 234 LYS LYS A . n A 1 200 PRO 200 235 235 PRO PRO A . n A 1 201 ARG 201 236 236 ARG ARG A . n A 1 202 ILE 202 237 237 ILE ILE A . n A 1 203 THR 203 238 238 THR THR A . n A 1 204 GLU 204 239 239 GLU GLU A . n A 1 205 GLU 205 240 240 GLU GLU A . n A 1 206 GLY 206 241 241 GLY GLY A . n A 1 207 GLU 207 242 242 GLU GLU A . n A 1 208 TYR 208 243 243 TYR TYR A . n A 1 209 ILE 209 244 244 ILE ILE A . n A 1 210 PRO 210 245 245 PRO PRO A . n A 1 211 LEU 211 246 246 LEU LEU A . n A 1 212 ASP 212 247 247 ASP ASP A . n A 1 213 GLN 213 248 248 GLN GLN A . n A 1 214 ILE 214 249 249 ILE ILE A . n A 1 215 ASP 215 250 250 ASP ASP A . n A 1 216 ILE 216 251 251 ILE ILE A . n A 1 217 ASP 217 252 252 ASP ASP A . n A 1 218 VAL 218 253 253 VAL VAL A . n A 1 219 GLY 219 254 254 GLY GLY A . n A 1 220 PHE 220 255 255 PHE PHE A . n A 1 221 ASP 221 256 256 ASP ASP A . n A 1 222 LYS 222 257 257 LYS LYS A . n A 1 223 GLY 223 258 258 GLY GLY A . n A 1 224 LEU 224 259 259 LEU LEU A . n A 1 225 ASP 225 260 260 ASP ASP A . n A 1 226 ARG 226 261 261 ARG ARG A . n A 1 227 ILE 227 262 262 ILE ILE A . n A 1 228 PHE 228 263 263 PHE PHE A . n A 1 229 LEU 229 264 264 LEU LEU A . n A 1 230 VAL 230 265 265 VAL VAL A . n A 1 231 SER 231 266 266 SER SER A . n A 1 232 PRO 232 267 267 PRO PRO A . n A 1 233 ILE 233 268 268 ILE ILE A . n A 1 234 THR 234 269 269 THR THR A . n A 1 235 ILE 235 270 270 ILE ILE A . n A 1 236 LEU 236 271 271 LEU LEU A . n A 1 237 HIS 237 272 272 HIS HIS A . n A 1 238 GLU 238 273 273 GLU GLU A . n A 1 239 ILE 239 274 274 ILE ILE A . n A 1 240 ASN 240 275 275 ASN ASN A . n A 1 241 GLU 241 276 276 GLU GLU A . n A 1 242 ASP 242 277 277 ASP ASP A . n A 1 243 SER 243 278 278 SER SER A . n A 1 244 PRO 244 279 279 PRO PRO A . n A 1 245 LEU 245 280 280 LEU LEU A . n A 1 246 PHE 246 281 281 PHE PHE A . n A 1 247 GLY 247 282 282 GLY GLY A . n A 1 248 ILE 248 283 283 ILE ILE A . n A 1 249 SER 249 284 284 SER SER A . n A 1 250 ARG 250 285 285 ARG ARG A . n A 1 251 GLN 251 286 286 GLN GLN A . n A 1 252 ASP 252 287 287 ASP ASP A . n A 1 253 LEU 253 288 288 LEU LEU A . n A 1 254 GLU 254 289 289 GLU GLU A . n A 1 255 THR 255 290 290 THR THR A . n A 1 256 ASP 256 291 291 ASP ASP A . n A 1 257 ASP 257 292 292 ASP ASP A . n A 1 258 PHE 258 293 293 PHE PHE A . n A 1 259 GLU 259 294 294 GLU GLU A . n A 1 260 ILE 260 295 295 ILE ILE A . n A 1 261 VAL 261 296 296 VAL VAL A . n A 1 262 VAL 262 297 297 VAL VAL A . n A 1 263 ILE 263 298 298 ILE ILE A . n A 1 264 LEU 264 299 299 LEU LEU A . n A 1 265 GLU 265 300 300 GLU GLU A . n A 1 266 GLY 266 301 301 GLY GLY A . n A 1 267 MET 267 302 302 MET MET A . n A 1 268 VAL 268 303 303 VAL VAL A . n A 1 269 GLU 269 304 304 GLU GLU A . n A 1 270 ALA 270 305 305 ALA ALA A . n A 1 271 THR 271 306 306 THR THR A . n A 1 272 ALA 272 307 307 ALA ALA A . n A 1 273 MET 273 308 308 MET MET A . n A 1 274 THR 274 309 309 THR THR A . n A 1 275 THR 275 310 310 THR THR A . n A 1 276 GLN 276 311 311 GLN GLN A . n A 1 277 ALA 277 312 312 ALA ALA A . n A 1 278 ARG 278 313 313 ARG ARG A . n A 1 279 SER 279 314 314 SER SER A . n A 1 280 SER 280 315 315 SER SER A . n A 1 281 TYR 281 316 316 TYR TYR A . n A 1 282 LEU 282 317 317 LEU LEU A . n A 1 283 ALA 283 318 318 ALA ALA A . n A 1 284 SER 284 319 319 SER SER A . n A 1 285 GLU 285 320 320 GLU GLU A . n A 1 286 ILE 286 321 321 ILE ILE A . n A 1 287 LEU 287 322 322 LEU LEU A . n A 1 288 TRP 288 323 323 TRP TRP A . n A 1 289 GLY 289 324 324 GLY GLY A . n A 1 290 HIS 290 325 325 HIS HIS A . n A 1 291 ARG 291 326 326 ARG ARG A . n A 1 292 PHE 292 327 327 PHE PHE A . n A 1 293 GLU 293 328 328 GLU GLU A . n A 1 294 PRO 294 329 329 PRO PRO A . n A 1 295 VAL 295 330 330 VAL VAL A . n A 1 296 LEU 296 331 331 LEU LEU A . n A 1 297 PHE 297 332 332 PHE PHE A . n A 1 298 GLU 298 333 333 GLU GLU A . n A 1 299 GLU 299 334 334 GLU GLU A . n A 1 300 LYS 300 335 335 LYS LYS A . n A 1 301 ASN 301 336 336 ASN ASN A . n A 1 302 GLN 302 337 337 GLN GLN A . n A 1 303 TYR 303 338 338 TYR TYR A . n A 1 304 LYS 304 339 339 LYS LYS A . n A 1 305 VAL 305 340 340 VAL VAL A . n A 1 306 ASP 306 341 341 ASP ASP A . n A 1 307 TYR 307 342 342 TYR TYR A . n A 1 308 SER 308 343 343 SER SER A . n A 1 309 HIS 309 344 344 HIS HIS A . n A 1 310 PHE 310 345 345 PHE PHE A . n A 1 311 HIS 311 346 346 HIS HIS A . n A 1 312 LYS 312 347 347 LYS LYS A . n A 1 313 THR 313 348 348 THR THR A . n A 1 314 TYR 314 349 349 TYR TYR A . n A 1 315 GLU 315 350 350 GLU GLU A . n A 1 316 VAL 316 351 351 VAL VAL A . n A 1 317 PRO 317 352 352 PRO PRO A . n A 1 318 SER 318 353 353 SER SER A . n A 1 319 THR 319 354 354 THR THR A . n A 1 320 PRO 320 355 355 PRO PRO A . n A 1 321 ARG 321 356 356 ARG ARG A . n A 1 322 CYS 322 357 357 CYS CYS A . n A 1 323 SER 323 358 358 SER SER A . n A 1 324 ALA 324 359 359 ALA ALA A . n A 1 325 LYS 325 360 360 LYS LYS A . n A 1 326 ASP 326 361 361 ASP ASP A . n A 1 327 LEU 327 362 362 LEU LEU A . n A 1 328 VAL 328 363 363 VAL VAL A . n A 1 329 GLU 329 364 364 GLU GLU A . n A 1 330 ASN 330 365 365 ASN ASN A . n A 1 331 LYS 331 366 366 LYS LYS A . n A 1 332 PHE 332 367 367 PHE PHE A . n A 1 333 LEU 333 368 368 LEU LEU A . n A 1 334 LEU 334 369 369 LEU LEU A . n A 1 335 SER 335 370 370 SER SER A . n A 1 336 ASN 336 371 371 ASN ASN A . n A 1 337 SER 337 372 372 SER SER A . n A 1 338 LEU 338 373 ? ? ? A . n A 1 339 GLU 339 374 ? ? ? A . n A 1 340 VAL 340 375 ? ? ? A . n A 1 341 LEU 341 376 ? ? ? A . n A 1 342 PHE 342 377 ? ? ? A . n A 1 343 GLN 343 378 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 K 1 501 501 K K A . C 2 K 1 502 502 K K A . D 2 K 1 503 503 K K A . E 2 K 1 504 504 K K A . F 2 K 1 505 505 K K A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A MET 70 ? CG ? A MET 35 CG 2 1 Y 1 A MET 70 ? SD ? A MET 35 SD 3 1 Y 1 A MET 70 ? CE ? A MET 35 CE 4 1 Y 1 A PHE 71 ? CG ? A PHE 36 CG 5 1 Y 1 A PHE 71 ? CD1 ? A PHE 36 CD1 6 1 Y 1 A PHE 71 ? CD2 ? A PHE 36 CD2 7 1 Y 1 A PHE 71 ? CE1 ? A PHE 36 CE1 8 1 Y 1 A PHE 71 ? CE2 ? A PHE 36 CE2 9 1 Y 1 A PHE 71 ? CZ ? A PHE 36 CZ 10 1 Y 1 A THR 72 ? OG1 ? A THR 37 OG1 11 1 Y 1 A THR 72 ? CG2 ? A THR 37 CG2 12 1 Y 1 A THR 73 ? OG1 ? A THR 38 OG1 13 1 Y 1 A THR 73 ? CG2 ? A THR 38 CG2 14 1 Y 1 A CYS 74 ? SG ? A CYS 39 SG 15 1 Y 1 A VAL 75 ? CG1 ? A VAL 40 CG1 16 1 Y 1 A VAL 75 ? CG2 ? A VAL 40 CG2 17 1 Y 1 A ASP 76 ? CG ? A ASP 41 CG 18 1 Y 1 A ASP 76 ? OD1 ? A ASP 41 OD1 19 1 Y 1 A ASP 76 ? OD2 ? A ASP 41 OD2 20 1 Y 1 A ILE 77 ? CG1 ? A ILE 42 CG1 21 1 Y 1 A ILE 77 ? CG2 ? A ILE 42 CG2 22 1 Y 1 A ILE 77 ? CD1 ? A ILE 42 CD1 23 1 Y 1 A ARG 78 ? CG ? A ARG 43 CG 24 1 Y 1 A ARG 78 ? CD ? A ARG 43 CD 25 1 Y 1 A ARG 78 ? NE ? A ARG 43 NE 26 1 Y 1 A ARG 78 ? CZ ? A ARG 43 CZ 27 1 Y 1 A ARG 78 ? NH1 ? A ARG 43 NH1 28 1 Y 1 A ARG 78 ? NH2 ? A ARG 43 NH2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 MOLREP phasing . ? 2 CNS refinement 1.2 ? 3 DENZO 'data reduction' . ? 4 SCALEPACK 'data scaling' . ? 5 # _cell.entry_id 3JYC _cell.length_a 84.018 _cell.length_b 84.018 _cell.length_c 196.121 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3JYC _symmetry.space_group_name_H-M 'I 4' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 # _exptl.entry_id 3JYC _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 4.40 _exptl_crystal.density_percent_sol 72.03 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277.1 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_pH_range 6-9.5 _exptl_crystal_grow.pdbx_details '7-20% PEG 400, 0.5M sodium or potassium chloride, 50mM Buffer, pH 6-9.5, VAPOR DIFFUSION, HANGING DROP, temperature 277.1K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2009-03-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97949 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 24-ID-C' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 24-ID-C _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97949 # _reflns.entry_id 3JYC _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50 _reflns.d_resolution_high 3.1 _reflns.number_obs 12122 _reflns.number_all 12122 _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.068 _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate . _reflns.pdbx_redundancy 5.4 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 3.1 _reflns_shell.d_res_low 3.21 _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.736 _reflns_shell.meanI_over_sigI_obs 2.3 _reflns_shell.pdbx_redundancy 4.6 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3JYC _refine.ls_number_reflns_obs 12122 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F .0 _refine.pdbx_data_cutoff_high_absF 1477087.57 _refine.pdbx_data_cutoff_low_absF .000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 49.03 _refine.ls_d_res_high 3.11 _refine.ls_percent_reflns_obs 99.1 _refine.ls_R_factor_obs .242 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work .242 _refine.ls_R_factor_R_free .270 _refine.ls_R_factor_R_free_error .011 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 609 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 113.3 _refine.aniso_B[1][1] -.07 _refine.aniso_B[2][2] -.07 _refine.aniso_B[3][3] .14 _refine.aniso_B[1][2] .00 _refine.aniso_B[1][3] .00 _refine.aniso_B[2][3] .00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol .3 _refine.solvent_model_param_bsol 75.9165 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'BULK SOLVENT MODEL USED' _refine.pdbx_starting_model 'PDB Entry: 1U4F' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 3JYC _refine_analyze.Luzzati_coordinate_error_obs .42 _refine_analyze.Luzzati_sigma_a_obs .72 _refine_analyze.Luzzati_d_res_low_obs 4.00 _refine_analyze.Luzzati_coordinate_error_free .52 _refine_analyze.Luzzati_sigma_a_free .95 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2544 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 5 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2549 _refine_hist.d_res_high 3.11 _refine_hist.d_res_low 49.03 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d .008 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.5 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 24.2 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d .79 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.48 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.65 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 2.53 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 3.33 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_restr_ncs.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_restr_ncs.dom_id 1 _refine_ls_restr_ncs.ncs_model_details NONE _refine_ls_restr_ncs.rms_dev_position ? _refine_ls_restr_ncs.weight_position ? _refine_ls_restr_ncs.rms_dev_B_iso ? _refine_ls_restr_ncs.weight_B_iso ? _refine_ls_restr_ncs.pdbx_ordinal 1 _refine_ls_restr_ncs.pdbx_type . _refine_ls_restr_ncs.pdbx_auth_asym_id . _refine_ls_restr_ncs.pdbx_ens_id 1 _refine_ls_restr_ncs.pdbx_number ? _refine_ls_restr_ncs.pdbx_asym_id ? _refine_ls_restr_ncs.pdbx_rms ? _refine_ls_restr_ncs.pdbx_weight ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 10 _refine_ls_shell.d_res_high 3.10 _refine_ls_shell.d_res_low 3.21 _refine_ls_shell.number_reflns_R_work 1022 _refine_ls_shell.R_factor_R_work .356 _refine_ls_shell.percent_reflns_obs 88.1 _refine_ls_shell.R_factor_R_free .404 _refine_ls_shell.R_factor_R_free_error .054 _refine_ls_shell.percent_reflns_R_free 5.1 _refine_ls_shell.number_reflns_R_free 55 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.pdbx_refine_id _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file 'X-RAY DIFFRACTION' 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 carbohydrate.param carbohydrate.top 'X-RAY DIFFRACTION' 3 water_rep.param water.top 'X-RAY DIFFRACTION' 4 ion.param ion.top # _struct_ncs_dom.id 1 _struct_ncs_dom.details ? _struct_ncs_dom.pdbx_ens_id 1 # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _database_PDB_matrix.entry_id 3JYC _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] .000000 _database_PDB_matrix.origx[1][3] .000000 _database_PDB_matrix.origx[2][1] .000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] .000000 _database_PDB_matrix.origx[3][1] .000000 _database_PDB_matrix.origx[3][2] .000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] .00000 _database_PDB_matrix.origx_vector[2] .00000 _database_PDB_matrix.origx_vector[3] .00000 # _struct.entry_id 3JYC _struct.title 'Crystal structure of the eukaryotic strong inward-rectifier K+ channel Kir2.2 at 3.1 Angstrom resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3JYC _struct_keywords.pdbx_keywords 'METAL TRANSPORT' _struct_keywords.text 'a transmembrane pore and a cytoplasmic pore, METAL TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 3JYC _struct_ref.pdbx_db_accession 3JYC _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 36 _struct_ref.pdbx_seq_one_letter_code ;MARRKCRNRFVKKNGQCNVEFTNMDDKPQRYIADMFTTCVDIRWRYMLLLFSLAFLVSWLLFGLIFWLIALIHGDLENPG GDDTFKPCVLQVNGFVAAFLFSIETQTTIGYGFRCVTEECPLAVFMVVVQSIVGCIIDSFMIGAIMAKMARPKKRAQTLL FSHNAVVAMRDGKLCLMWRVGNLRKSHIVEAHVRAQLIKPRITEEGEYIPLDQIDIDVGFDKGLDRIFLVSPITILHEIN EDSPLFGISRQDLETDDFEIVVILEGMVEATAMTTQARSSYLASEILWGHRFEPVLFEEKNQYKVDYSHFHKTYEVPSTP RCSAKDLVENKFLLSNSLEVLFQ ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3JYC _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 343 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 3JYC _struct_ref_seq.db_align_beg 36 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 378 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 36 _struct_ref_seq.pdbx_auth_seq_align_end 378 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 20060 ? 1 MORE -119 ? 1 'SSA (A^2)' 59480 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_445 -x-1,-y-1,z -1.0000000000 0.0000000000 0.0000000000 -84.0180000000 0.0000000000 -1.0000000000 0.0000000000 -84.0180000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_455 -y-1,x,z 0.0000000000 -1.0000000000 0.0000000000 -84.0180000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4 'crystal symmetry operation' 4_545 y,-x-1,z 0.0000000000 1.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 -84.0180000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 MET A 35 ? VAL A 40 ? MET A 70 VAL A 75 5 ? 6 HELX_P HELX_P2 2 MET A 47 ? HIS A 73 ? MET A 82 HIS A 108 1 ? 27 HELX_P HELX_P3 3 GLY A 74 ? ASN A 78 ? GLY A 109 ASN A 113 5 ? 5 HELX_P HELX_P4 4 GLY A 94 ? THR A 107 ? GLY A 129 THR A 142 1 ? 14 HELX_P HELX_P5 5 CYS A 120 ? LYS A 148 ? CYS A 155 LYS A 183 1 ? 29 HELX_P HELX_P6 6 GLY A 219 ? GLY A 223 ? GLY A 254 GLY A 258 5 ? 5 HELX_P HELX_P7 7 SER A 249 ? GLU A 254 ? SER A 284 GLU A 289 1 ? 6 HELX_P HELX_P8 8 SER A 323 ? LEU A 334 ? SER A 358 LEU A 369 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 88 SG ? ? ? 1_555 A CYS 120 SG ? ? A CYS 123 A CYS 155 1_555 ? ? ? ? ? ? ? 2.044 ? ? metalc1 metalc ? ? A THR 108 O ? ? ? 1_555 D K . K ? ? A THR 143 A K 503 1_555 ? ? ? ? ? ? ? 2.585 ? ? metalc2 metalc ? ? A THR 108 OG1 ? ? ? 1_555 E K . K ? ? A THR 143 A K 504 1_555 ? ? ? ? ? ? ? 2.608 ? ? metalc3 metalc ? ? A THR 108 O ? ? ? 1_555 E K . K ? ? A THR 143 A K 504 1_555 ? ? ? ? ? ? ? 2.754 ? ? metalc4 metalc ? ? A ILE 109 O ? ? ? 1_555 C K . K ? ? A ILE 144 A K 502 1_555 ? ? ? ? ? ? ? 2.593 ? ? metalc5 metalc ? ? A ILE 109 O ? ? ? 1_555 D K . K ? ? A ILE 144 A K 503 1_555 ? ? ? ? ? ? ? 2.882 ? ? metalc6 metalc ? ? A GLY 110 O ? ? ? 1_555 B K . K ? ? A GLY 145 A K 501 1_555 ? ? ? ? ? ? ? 2.858 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A THR 108 ? A THR 143 ? 1_555 K ? D K . ? A K 503 ? 1_555 O ? A ILE 109 ? A ILE 144 ? 1_555 72.3 ? 2 OG1 ? A THR 108 ? A THR 143 ? 1_555 K ? E K . ? A K 504 ? 1_555 O ? A THR 108 ? A THR 143 ? 1_555 60.7 ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id CYS _pdbx_modification_feature.label_asym_id A _pdbx_modification_feature.label_seq_id 88 _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id CYS _pdbx_modification_feature.modified_residue_label_asym_id A _pdbx_modification_feature.modified_residue_label_seq_id 120 _pdbx_modification_feature.modified_residue_label_alt_id ? _pdbx_modification_feature.auth_comp_id CYS _pdbx_modification_feature.auth_asym_id A _pdbx_modification_feature.auth_seq_id 123 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id CYS _pdbx_modification_feature.modified_residue_auth_asym_id A _pdbx_modification_feature.modified_residue_auth_seq_id 155 _pdbx_modification_feature.modified_residue_PDB_ins_code ? _pdbx_modification_feature.modified_residue_symmetry 1_555 _pdbx_modification_feature.comp_id_linking_atom SG _pdbx_modification_feature.modified_residue_id_linking_atom SG _pdbx_modification_feature.modified_residue_id . _pdbx_modification_feature.ref_pcm_id . _pdbx_modification_feature.ref_comp_id . _pdbx_modification_feature.type None _pdbx_modification_feature.category 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 2 ? C ? 3 ? D ? 4 ? E ? 4 ? F ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 19 ? THR A 22 ? VAL A 54 THR A 57 A 2 TYR A 303 ? ASP A 306 ? TYR A 338 ASP A 341 A 3 LEU A 296 ? GLU A 298 ? LEU A 331 GLU A 333 B 1 VAL A 89 ? LEU A 90 ? VAL A 124 LEU A 125 B 2 CYS A 115 ? VAL A 116 ? CYS A 150 VAL A 151 C 1 LEU A 159 ? PHE A 161 ? LEU A 194 PHE A 196 C 2 LYS A 173 ? ASN A 182 ? LYS A 208 ASN A 217 C 3 ILE A 233 ? GLU A 238 ? ILE A 268 GLU A 273 D 1 LEU A 159 ? PHE A 161 ? LEU A 194 PHE A 196 D 2 LYS A 173 ? ASN A 182 ? LYS A 208 ASN A 217 D 3 ALA A 165 ? ARG A 170 ? ALA A 200 ARG A 205 D 4 ILE A 286 ? TRP A 288 ? ILE A 321 TRP A 323 E 1 TYR A 208 ? ILE A 216 ? TYR A 243 ILE A 251 E 2 ILE A 188 ? ILE A 202 ? ILE A 223 ILE A 237 E 3 GLU A 259 ? VAL A 268 ? GLU A 294 VAL A 303 E 4 MET A 273 ? ALA A 277 ? MET A 308 ALA A 312 F 1 ARG A 226 ? ILE A 227 ? ARG A 261 ILE A 262 F 2 ILE A 188 ? ILE A 202 ? ILE A 223 ILE A 237 F 3 GLU A 259 ? VAL A 268 ? GLU A 294 VAL A 303 F 4 SER A 280 ? LEU A 282 ? SER A 315 LEU A 317 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLU A 20 ? N GLU A 55 O VAL A 305 ? O VAL A 340 A 2 3 O LYS A 304 ? O LYS A 339 N PHE A 297 ? N PHE A 332 B 1 2 N LEU A 90 ? N LEU A 125 O CYS A 115 ? O CYS A 150 C 1 2 N LEU A 160 ? N LEU A 195 O GLY A 181 ? O GLY A 216 C 2 3 N TRP A 178 ? N TRP A 213 O ILE A 235 ? O ILE A 270 D 1 2 N LEU A 160 ? N LEU A 195 O GLY A 181 ? O GLY A 216 D 2 3 O MET A 177 ? O MET A 212 N VAL A 166 ? N VAL A 201 D 3 4 N ALA A 165 ? N ALA A 200 O LEU A 287 ? O LEU A 322 E 1 2 O ILE A 214 ? O ILE A 249 N LEU A 197 ? N LEU A 232 E 2 3 N ILE A 198 ? N ILE A 233 O GLU A 259 ? O GLU A 294 E 3 4 N GLY A 266 ? N GLY A 301 O THR A 275 ? O THR A 310 F 1 2 O ILE A 227 ? O ILE A 262 N ALA A 191 ? N ALA A 226 F 2 3 N ILE A 198 ? N ILE A 233 O GLU A 259 ? O GLU A 294 F 3 4 N ILE A 260 ? N ILE A 295 O TYR A 281 ? O TYR A 316 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A K 501 ? 12 'BINDING SITE FOR RESIDUE K A 501' AC2 Software A K 502 ? 16 'BINDING SITE FOR RESIDUE K A 502' AC3 Software A K 503 ? 16 'BINDING SITE FOR RESIDUE K A 503' AC4 Software A K 504 ? 8 'BINDING SITE FOR RESIDUE K A 504' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 12 GLY A 110 ? GLY A 145 . ? 1_555 ? 2 AC1 12 GLY A 110 ? GLY A 145 . ? 2_445 ? 3 AC1 12 GLY A 110 ? GLY A 145 . ? 3_455 ? 4 AC1 12 GLY A 110 ? GLY A 145 . ? 4_545 ? 5 AC1 12 TYR A 111 ? TYR A 146 . ? 3_455 ? 6 AC1 12 TYR A 111 ? TYR A 146 . ? 2_445 ? 7 AC1 12 TYR A 111 ? TYR A 146 . ? 4_545 ? 8 AC1 12 TYR A 111 ? TYR A 146 . ? 1_555 ? 9 AC1 12 K C . ? K A 502 . ? 3_455 ? 10 AC1 12 K C . ? K A 502 . ? 4_545 ? 11 AC1 12 K C . ? K A 502 . ? 2_445 ? 12 AC1 12 K C . ? K A 502 . ? 1_555 ? 13 AC2 16 ILE A 109 ? ILE A 144 . ? 1_555 ? 14 AC2 16 ILE A 109 ? ILE A 144 . ? 2_445 ? 15 AC2 16 ILE A 109 ? ILE A 144 . ? 3_455 ? 16 AC2 16 ILE A 109 ? ILE A 144 . ? 4_545 ? 17 AC2 16 GLY A 110 ? GLY A 145 . ? 1_555 ? 18 AC2 16 GLY A 110 ? GLY A 145 . ? 4_545 ? 19 AC2 16 GLY A 110 ? GLY A 145 . ? 3_455 ? 20 AC2 16 GLY A 110 ? GLY A 145 . ? 2_445 ? 21 AC2 16 K B . ? K A 501 . ? 1_555 ? 22 AC2 16 K B . ? K A 501 . ? 2_445 ? 23 AC2 16 K B . ? K A 501 . ? 3_455 ? 24 AC2 16 K B . ? K A 501 . ? 4_545 ? 25 AC2 16 K D . ? K A 503 . ? 4_545 ? 26 AC2 16 K D . ? K A 503 . ? 3_455 ? 27 AC2 16 K D . ? K A 503 . ? 2_445 ? 28 AC2 16 K D . ? K A 503 . ? 1_555 ? 29 AC3 16 THR A 108 ? THR A 143 . ? 1_555 ? 30 AC3 16 THR A 108 ? THR A 143 . ? 2_445 ? 31 AC3 16 THR A 108 ? THR A 143 . ? 3_455 ? 32 AC3 16 THR A 108 ? THR A 143 . ? 4_545 ? 33 AC3 16 ILE A 109 ? ILE A 144 . ? 3_455 ? 34 AC3 16 ILE A 109 ? ILE A 144 . ? 2_445 ? 35 AC3 16 ILE A 109 ? ILE A 144 . ? 1_555 ? 36 AC3 16 ILE A 109 ? ILE A 144 . ? 4_545 ? 37 AC3 16 K C . ? K A 502 . ? 1_555 ? 38 AC3 16 K C . ? K A 502 . ? 2_445 ? 39 AC3 16 K C . ? K A 502 . ? 3_455 ? 40 AC3 16 K C . ? K A 502 . ? 4_545 ? 41 AC3 16 K E . ? K A 504 . ? 4_545 ? 42 AC3 16 K E . ? K A 504 . ? 3_455 ? 43 AC3 16 K E . ? K A 504 . ? 2_445 ? 44 AC3 16 K E . ? K A 504 . ? 1_555 ? 45 AC4 8 THR A 108 ? THR A 143 . ? 3_455 ? 46 AC4 8 THR A 108 ? THR A 143 . ? 1_555 ? 47 AC4 8 THR A 108 ? THR A 143 . ? 2_445 ? 48 AC4 8 THR A 108 ? THR A 143 . ? 4_545 ? 49 AC4 8 K D . ? K A 503 . ? 2_445 ? 50 AC4 8 K D . ? K A 503 . ? 3_455 ? 51 AC4 8 K D . ? K A 503 . ? 4_545 ? 52 AC4 8 K D . ? K A 503 . ? 1_555 ? # _pdbx_entry_details.entry_id 3JYC _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ;THE ELECTRON DENSITY FOR RESIDUES 61-69 IS NOT OBSERVED EVEN THOUGH THESE AMINO ACIDS ARE PRESENT IN THE CONSTRUCT. THE PROTEIN IS A TETRAMER WHICH CAN BE GENERATED BY THE CRYSTAL SYMMETRY (DESCRIBED IN REMARK 350) AND THE LACK OF DENSITY FOR RESIDUES 61-69 ALLOWS FOR TWO POSSIBLE CONNECTIVITIES. GIVEN THE DISTANCES RESIDUES 43-60 MOST LIKELY CONNECT TO RESIDUES 70-372 OF A NEIGHBORING SUBUNIT. ; _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 C _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ILE _pdbx_validate_rmsd_angle.auth_seq_id_1 244 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 N _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 PRO _pdbx_validate_rmsd_angle.auth_seq_id_2 245 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CA _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 PRO _pdbx_validate_rmsd_angle.auth_seq_id_3 245 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 128.50 _pdbx_validate_rmsd_angle.angle_target_value 119.30 _pdbx_validate_rmsd_angle.angle_deviation 9.20 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.50 _pdbx_validate_rmsd_angle.linker_flag Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 48 ? ? -60.14 1.60 2 1 PHE A 71 ? ? -79.19 29.11 3 1 ARG A 78 ? ? 158.32 -169.09 4 1 PHE A 90 ? ? -63.34 -73.45 5 1 LEU A 111 ? ? -43.87 -17.73 6 1 ASN A 113 ? ? -151.70 61.91 7 1 ILE A 180 ? ? -69.17 6.88 8 1 LYS A 183 ? ? -56.06 3.84 9 1 ALA A 185 ? ? -93.71 46.98 10 1 ARG A 186 ? ? 175.57 75.24 11 1 PRO A 187 ? ? -83.47 -150.37 12 1 LYS A 188 ? ? -155.87 -19.52 13 1 LYS A 189 ? ? -87.71 38.13 14 1 VAL A 265 ? ? -94.78 -86.29 15 1 GLU A 276 ? ? -31.66 -35.02 16 1 GLU A 289 ? ? -90.73 31.46 17 1 THR A 290 ? ? -148.45 -39.58 18 1 ALA A 305 ? ? -63.78 -75.06 19 1 ALA A 307 ? ? 33.19 64.99 20 1 SER A 314 ? ? 176.11 175.17 21 1 GLU A 334 ? ? -87.59 31.16 22 1 LYS A 335 ? ? 55.05 110.39 23 1 ASN A 336 ? ? 80.66 28.62 24 1 GLN A 337 ? ? 160.04 143.95 25 1 TYR A 342 ? ? -58.53 9.06 26 1 TYR A 349 ? ? -173.06 132.91 27 1 SER A 370 ? ? 167.22 -30.98 28 1 ASN A 371 ? ? -99.61 -95.09 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A K 501 ? B K . 2 1 A K 502 ? C K . 3 1 A K 503 ? D K . 4 1 A K 504 ? E K . 5 1 A K 505 ? F K . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 36 ? A MET 1 2 1 Y 1 A ALA 37 ? A ALA 2 3 1 Y 1 A ARG 38 ? A ARG 3 4 1 Y 1 A ARG 39 ? A ARG 4 5 1 Y 1 A LYS 40 ? A LYS 5 6 1 Y 1 A CYS 41 ? A CYS 6 7 1 Y 1 A ARG 42 ? A ARG 7 8 1 Y 1 A ASP 61 ? A ASP 26 9 1 Y 1 A LYS 62 ? A LYS 27 10 1 Y 1 A PRO 63 ? A PRO 28 11 1 Y 1 A GLN 64 ? A GLN 29 12 1 Y 1 A ARG 65 ? A ARG 30 13 1 Y 1 A TYR 66 ? A TYR 31 14 1 Y 1 A ILE 67 ? A ILE 32 15 1 Y 1 A ALA 68 ? A ALA 33 16 1 Y 1 A ASP 69 ? A ASP 34 17 1 Y 1 A LEU 373 ? A LEU 338 18 1 Y 1 A GLU 374 ? A GLU 339 19 1 Y 1 A VAL 375 ? A VAL 340 20 1 Y 1 A LEU 376 ? A LEU 341 21 1 Y 1 A PHE 377 ? A PHE 342 22 1 Y 1 A GLN 378 ? A GLN 343 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 K K K N N 180 LEU N N N N 181 LEU CA C N S 182 LEU C C N N 183 LEU O O N N 184 LEU CB C N N 185 LEU CG C N N 186 LEU CD1 C N N 187 LEU CD2 C N N 188 LEU OXT O N N 189 LEU H H N N 190 LEU H2 H N N 191 LEU HA H N N 192 LEU HB2 H N N 193 LEU HB3 H N N 194 LEU HG H N N 195 LEU HD11 H N N 196 LEU HD12 H N N 197 LEU HD13 H N N 198 LEU HD21 H N N 199 LEU HD22 H N N 200 LEU HD23 H N N 201 LEU HXT H N N 202 LYS N N N N 203 LYS CA C N S 204 LYS C C N N 205 LYS O O N N 206 LYS CB C N N 207 LYS CG C N N 208 LYS CD C N N 209 LYS CE C N N 210 LYS NZ N N N 211 LYS OXT O N N 212 LYS H H N N 213 LYS H2 H N N 214 LYS HA H N N 215 LYS HB2 H N N 216 LYS HB3 H N N 217 LYS HG2 H N N 218 LYS HG3 H N N 219 LYS HD2 H N N 220 LYS HD3 H N N 221 LYS HE2 H N N 222 LYS HE3 H N N 223 LYS HZ1 H N N 224 LYS HZ2 H N N 225 LYS HZ3 H N N 226 LYS HXT H N N 227 MET N N N N 228 MET CA C N S 229 MET C C N N 230 MET O O N N 231 MET CB C N N 232 MET CG C N N 233 MET SD S N N 234 MET CE C N N 235 MET OXT O N N 236 MET H H N N 237 MET H2 H N N 238 MET HA H N N 239 MET HB2 H N N 240 MET HB3 H N N 241 MET HG2 H N N 242 MET HG3 H N N 243 MET HE1 H N N 244 MET HE2 H N N 245 MET HE3 H N N 246 MET HXT H N N 247 PHE N N N N 248 PHE CA C N S 249 PHE C C N N 250 PHE O O N N 251 PHE CB C N N 252 PHE CG C Y N 253 PHE CD1 C Y N 254 PHE CD2 C Y N 255 PHE CE1 C Y N 256 PHE CE2 C Y N 257 PHE CZ C Y N 258 PHE OXT O N N 259 PHE H H N N 260 PHE H2 H N N 261 PHE HA H N N 262 PHE HB2 H N N 263 PHE HB3 H N N 264 PHE HD1 H N N 265 PHE HD2 H N N 266 PHE HE1 H N N 267 PHE HE2 H N N 268 PHE HZ H N N 269 PHE HXT H N N 270 PRO N N N N 271 PRO CA C N S 272 PRO C C N N 273 PRO O O N N 274 PRO CB C N N 275 PRO CG C N N 276 PRO CD C N N 277 PRO OXT O N N 278 PRO H H N N 279 PRO HA H N N 280 PRO HB2 H N N 281 PRO HB3 H N N 282 PRO HG2 H N N 283 PRO HG3 H N N 284 PRO HD2 H N N 285 PRO HD3 H N N 286 PRO HXT H N N 287 SER N N N N 288 SER CA C N S 289 SER C C N N 290 SER O O N N 291 SER CB C N N 292 SER OG O N N 293 SER OXT O N N 294 SER H H N N 295 SER H2 H N N 296 SER HA H N N 297 SER HB2 H N N 298 SER HB3 H N N 299 SER HG H N N 300 SER HXT H N N 301 THR N N N N 302 THR CA C N S 303 THR C C N N 304 THR O O N N 305 THR CB C N R 306 THR OG1 O N N 307 THR CG2 C N N 308 THR OXT O N N 309 THR H H N N 310 THR H2 H N N 311 THR HA H N N 312 THR HB H N N 313 THR HG1 H N N 314 THR HG21 H N N 315 THR HG22 H N N 316 THR HG23 H N N 317 THR HXT H N N 318 TRP N N N N 319 TRP CA C N S 320 TRP C C N N 321 TRP O O N N 322 TRP CB C N N 323 TRP CG C Y N 324 TRP CD1 C Y N 325 TRP CD2 C Y N 326 TRP NE1 N Y N 327 TRP CE2 C Y N 328 TRP CE3 C Y N 329 TRP CZ2 C Y N 330 TRP CZ3 C Y N 331 TRP CH2 C Y N 332 TRP OXT O N N 333 TRP H H N N 334 TRP H2 H N N 335 TRP HA H N N 336 TRP HB2 H N N 337 TRP HB3 H N N 338 TRP HD1 H N N 339 TRP HE1 H N N 340 TRP HE3 H N N 341 TRP HZ2 H N N 342 TRP HZ3 H N N 343 TRP HH2 H N N 344 TRP HXT H N N 345 TYR N N N N 346 TYR CA C N S 347 TYR C C N N 348 TYR O O N N 349 TYR CB C N N 350 TYR CG C Y N 351 TYR CD1 C Y N 352 TYR CD2 C Y N 353 TYR CE1 C Y N 354 TYR CE2 C Y N 355 TYR CZ C Y N 356 TYR OH O N N 357 TYR OXT O N N 358 TYR H H N N 359 TYR H2 H N N 360 TYR HA H N N 361 TYR HB2 H N N 362 TYR HB3 H N N 363 TYR HD1 H N N 364 TYR HD2 H N N 365 TYR HE1 H N N 366 TYR HE2 H N N 367 TYR HH H N N 368 TYR HXT H N N 369 VAL N N N N 370 VAL CA C N S 371 VAL C C N N 372 VAL O O N N 373 VAL CB C N N 374 VAL CG1 C N N 375 VAL CG2 C N N 376 VAL OXT O N N 377 VAL H H N N 378 VAL H2 H N N 379 VAL HA H N N 380 VAL HB H N N 381 VAL HG11 H N N 382 VAL HG12 H N N 383 VAL HG13 H N N 384 VAL HG21 H N N 385 VAL HG22 H N N 386 VAL HG23 H N N 387 VAL HXT H N N 388 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TRP N CA sing N N 304 TRP N H sing N N 305 TRP N H2 sing N N 306 TRP CA C sing N N 307 TRP CA CB sing N N 308 TRP CA HA sing N N 309 TRP C O doub N N 310 TRP C OXT sing N N 311 TRP CB CG sing N N 312 TRP CB HB2 sing N N 313 TRP CB HB3 sing N N 314 TRP CG CD1 doub Y N 315 TRP CG CD2 sing Y N 316 TRP CD1 NE1 sing Y N 317 TRP CD1 HD1 sing N N 318 TRP CD2 CE2 doub Y N 319 TRP CD2 CE3 sing Y N 320 TRP NE1 CE2 sing Y N 321 TRP NE1 HE1 sing N N 322 TRP CE2 CZ2 sing Y N 323 TRP CE3 CZ3 doub Y N 324 TRP CE3 HE3 sing N N 325 TRP CZ2 CH2 doub Y N 326 TRP CZ2 HZ2 sing N N 327 TRP CZ3 CH2 sing Y N 328 TRP CZ3 HZ3 sing N N 329 TRP CH2 HH2 sing N N 330 TRP OXT HXT sing N N 331 TYR N CA sing N N 332 TYR N H sing N N 333 TYR N H2 sing N N 334 TYR CA C sing N N 335 TYR CA CB sing N N 336 TYR CA HA sing N N 337 TYR C O doub N N 338 TYR C OXT sing N N 339 TYR CB CG sing N N 340 TYR CB HB2 sing N N 341 TYR CB HB3 sing N N 342 TYR CG CD1 doub Y N 343 TYR CG CD2 sing Y N 344 TYR CD1 CE1 sing Y N 345 TYR CD1 HD1 sing N N 346 TYR CD2 CE2 doub Y N 347 TYR CD2 HD2 sing N N 348 TYR CE1 CZ doub Y N 349 TYR CE1 HE1 sing N N 350 TYR CE2 CZ sing Y N 351 TYR CE2 HE2 sing N N 352 TYR CZ OH sing N N 353 TYR OH HH sing N N 354 TYR OXT HXT sing N N 355 VAL N CA sing N N 356 VAL N H sing N N 357 VAL N H2 sing N N 358 VAL CA C sing N N 359 VAL CA CB sing N N 360 VAL CA HA sing N N 361 VAL C O doub N N 362 VAL C OXT sing N N 363 VAL CB CG1 sing N N 364 VAL CB CG2 sing N N 365 VAL CB HB sing N N 366 VAL CG1 HG11 sing N N 367 VAL CG1 HG12 sing N N 368 VAL CG1 HG13 sing N N 369 VAL CG2 HG21 sing N N 370 VAL CG2 HG22 sing N N 371 VAL CG2 HG23 sing N N 372 VAL OXT HXT sing N N 373 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1U4F _pdbx_initial_refinement_model.details 'PDB Entry: 1U4F' # _atom_sites.entry_id 3JYC _atom_sites.fract_transf_matrix[1][1] 0.011902 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011902 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005099 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C K N O S # loop_