HEADER ODORANT BINDING PROTEIN 27-SEP-09 3K1E TITLE CRYSTAL STRUCTURE OF ODORANT BINDING PROTEIN 1 (AAEGOBP1) FROM AEDES TITLE 2 AEGYPTI COMPND MOL_ID: 1; COMPND 2 MOLECULE: ODORANT BINDING PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 19-143; COMPND 5 SYNONYM: ODORANT-BINDING PROTEIN 1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AEDES AEGYPTI; SOURCE 3 ORGANISM_COMMON: YELLOWFEVER MOSQUITO; SOURCE 4 ORGANISM_TAXID: 7159; SOURCE 5 GENE: AAEL009449; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET22B(+) KEYWDS INSECT ODORANT BINDING PROTEIN FOLD, ODORANT BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR N.R.LEITE,R.KROGH,W.S.LEAL,J.IULEK,G.OLIVA REVDAT 4 06-SEP-23 3K1E 1 REMARK LINK REVDAT 3 21-MAR-12 3K1E 1 JRNL REVDAT 2 13-JUL-11 3K1E 1 VERSN REVDAT 1 08-DEC-09 3K1E 0 JRNL AUTH N.R.LEITE,R.KROGH,W.XU,Y.ISHIDA,J.IULEK,W.S.LEAL,G.OLIVA JRNL TITL STRUCTURE OF AN ODORANT-BINDING PROTEIN FROM THE MOSQUITO JRNL TITL 2 AEDES AEGYPTI SUGGESTS A BINDING POCKET COVERED BY A JRNL TITL 3 PH-SENSITIVE "LID". JRNL REF PLOS ONE V. 4 E8006 2009 JRNL REFN ESSN 1932-6203 JRNL PMID 19956631 JRNL DOI 10.1371/JOURNAL.PONE.0008006 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0072 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 68.68 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 19077 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.154 REMARK 3 R VALUE (WORKING SET) : 0.151 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 972 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.90 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1343 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.68 REMARK 3 BIN R VALUE (WORKING SET) : 0.2290 REMARK 3 BIN FREE R VALUE SET COUNT : 73 REMARK 3 BIN FREE R VALUE : 0.2690 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1935 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 59 REMARK 3 SOLVENT ATOMS : 410 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 21.43 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 11.91 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.34000 REMARK 3 B22 (A**2) : 1.22000 REMARK 3 B33 (A**2) : 0.09000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.11000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.160 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.149 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.105 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.619 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.938 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2218 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1556 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3027 ; 1.188 ; 2.004 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3724 ; 0.824 ; 3.007 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 285 ; 4.874 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 104 ;35.678 ;24.712 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 392 ;12.618 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ; 9.398 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 312 ; 0.068 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2407 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 415 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1277 ; 0.733 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 497 ; 0.207 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2093 ; 1.222 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 941 ; 2.137 ; 4.500 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 910 ; 3.114 ; 6.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 125 REMARK 3 RESIDUE RANGE : A 126 A 201 REMARK 3 RESIDUE RANGE : A 203 A 489 REMARK 3 ORIGIN FOR THE GROUP (A): 8.2081 41.5546 21.9613 REMARK 3 T TENSOR REMARK 3 T11: 0.0254 T22: 0.0159 REMARK 3 T33: 0.0074 T12: -0.0034 REMARK 3 T13: -0.0040 T23: -0.0097 REMARK 3 L TENSOR REMARK 3 L11: 4.3531 L22: 2.8764 REMARK 3 L33: 3.6997 L12: -0.8885 REMARK 3 L13: -0.8440 L23: -0.2616 REMARK 3 S TENSOR REMARK 3 S11: -0.0016 S12: -0.2591 S13: 0.1719 REMARK 3 S21: 0.2440 S22: 0.0190 S23: -0.0751 REMARK 3 S31: -0.1467 S32: 0.0711 S33: -0.0173 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 10 B 125 REMARK 3 RESIDUE RANGE : B 126 B 202 REMARK 3 RESIDUE RANGE : B 203 B 509 REMARK 3 ORIGIN FOR THE GROUP (A): 26.6268 19.3715 10.9283 REMARK 3 T TENSOR REMARK 3 T11: 0.0098 T22: 0.0114 REMARK 3 T33: 0.0063 T12: 0.0025 REMARK 3 T13: -0.0021 T23: 0.0068 REMARK 3 L TENSOR REMARK 3 L11: 4.7879 L22: 3.1146 REMARK 3 L33: 2.5075 L12: -0.4253 REMARK 3 L13: 0.1071 L23: 1.0304 REMARK 3 S TENSOR REMARK 3 S11: -0.0322 S12: -0.2156 S13: -0.1106 REMARK 3 S21: 0.1598 S22: 0.0086 S23: -0.0745 REMARK 3 S31: 0.1102 S32: 0.0517 S33: 0.0236 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.00 REMARK 3 ION PROBE RADIUS : 0.40 REMARK 3 SHRINKAGE RADIUS : 0.50 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3K1E COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-SEP-09. REMARK 100 THE DEPOSITION ID IS D_1000055423. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-APR-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X12B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9000 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19077 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 70.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07100 REMARK 200 FOR THE DATA SET : 20.3500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 7.38 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.54700 REMARK 200 FOR SHELL : 4.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2ERB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2 MICROLITER DROPS, WITH EQUAL VOLUMES REMARK 280 OF PROTEIN AT 50 MG/ML AND RESERVOIR SOLUTION CONTAINING 28% PEG REMARK 280 8000, 250 MM MGCL2, 50 MM TRIS-HCL PH 8.5, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 23.93500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 1 REMARK 465 ASP B 1 REMARK 465 VAL B 2 REMARK 465 THR B 3 REMARK 465 PRO B 4 REMARK 465 ARG B 5 REMARK 465 ARG B 6 REMARK 465 ASP B 7 REMARK 465 ALA B 8 REMARK 465 GLU B 9 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL A 2 CG1 CG2 REMARK 470 GLU A 14 CG CD OE1 OE2 REMARK 470 LYS A 20 CD CE NZ REMARK 470 GLU A 24 OE1 OE2 REMARK 470 LYS A 28 CE NZ REMARK 470 LYS A 44 CD CE NZ REMARK 470 LYS A 63 CE NZ REMARK 470 ASP A 82 OD1 OD2 REMARK 470 LYS B 28 CE NZ REMARK 470 LYS B 29 CE NZ REMARK 470 GLU B 101 OE1 OE2 REMARK 470 LYS B 120 CD CE NZ REMARK 470 ILE B 125 CG1 CG2 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU B 116 O HOH B 396 2.01 REMARK 500 OE1 GLU A 116 O HOH A 440 2.10 REMARK 500 O HOH B 315 O HOH B 435 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP B 118 73.39 -151.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PEU A 126 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 85 NE2 REMARK 620 2 HOH A 203 O 161.8 REMARK 620 3 HOH A 204 O 74.8 89.2 REMARK 620 4 HOH A 205 O 84.0 88.2 92.6 REMARK 620 5 HOH A 206 O 96.8 91.3 88.9 178.5 REMARK 620 6 HOH A 207 O 104.3 91.9 178.0 89.1 89.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 126 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 77 O REMARK 620 2 LEU B 80 O 83.9 REMARK 620 3 HIS B 85 ND1 92.6 118.1 REMARK 620 4 HOH B 203 O 103.6 94.0 145.6 REMARK 620 5 HOH B 204 O 76.0 87.1 33.5 178.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 208 O REMARK 620 2 HOH B 209 O 91.3 REMARK 620 3 HOH B 210 O 91.7 90.3 REMARK 620 4 HOH B 211 O 87.3 93.2 176.3 REMARK 620 5 HOH B 212 O 90.2 178.4 89.3 87.2 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 126 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEU A 126 DBREF 3K1E A 1 125 UNP Q6Y2R8 Q6Y2R8_AEDAE 19 143 DBREF 3K1E B 1 125 UNP Q6Y2R8 Q6Y2R8_AEDAE 19 143 SEQRES 1 A 125 ASP VAL THR PRO ARG ARG ASP ALA GLU TYR PRO PRO PRO SEQRES 2 A 125 GLU PHE LEU GLU ALA MET LYS PRO LEU ARG GLU ILE CYS SEQRES 3 A 125 ILE LYS LYS THR GLY VAL THR GLU GLU ALA ILE ILE GLU SEQRES 4 A 125 PHE SER ASP GLY LYS VAL HIS GLU ASP GLU ASN LEU LYS SEQRES 5 A 125 CYS TYR MET ASN CYS LEU PHE HIS GLU ALA LYS VAL VAL SEQRES 6 A 125 ASP ASP THR GLY HIS VAL HIS LEU GLU LYS LEU HIS ASP SEQRES 7 A 125 ALA LEU PRO ASP SER MET HIS ASP ILE ALA LEU HIS MET SEQRES 8 A 125 GLY LYS ARG CYS LEU TYR PRO GLU GLY GLU ASN LEU CYS SEQRES 9 A 125 GLU LYS ALA PHE TRP LEU HIS LYS CYS TRP LYS GLU SER SEQRES 10 A 125 ASP PRO LYS HIS TYR PHE LEU ILE SEQRES 1 B 125 ASP VAL THR PRO ARG ARG ASP ALA GLU TYR PRO PRO PRO SEQRES 2 B 125 GLU PHE LEU GLU ALA MET LYS PRO LEU ARG GLU ILE CYS SEQRES 3 B 125 ILE LYS LYS THR GLY VAL THR GLU GLU ALA ILE ILE GLU SEQRES 4 B 125 PHE SER ASP GLY LYS VAL HIS GLU ASP GLU ASN LEU LYS SEQRES 5 B 125 CYS TYR MET ASN CYS LEU PHE HIS GLU ALA LYS VAL VAL SEQRES 6 B 125 ASP ASP THR GLY HIS VAL HIS LEU GLU LYS LEU HIS ASP SEQRES 7 B 125 ALA LEU PRO ASP SER MET HIS ASP ILE ALA LEU HIS MET SEQRES 8 B 125 GLY LYS ARG CYS LEU TYR PRO GLU GLY GLU ASN LEU CYS SEQRES 9 B 125 GLU LYS ALA PHE TRP LEU HIS LYS CYS TRP LYS GLU SER SEQRES 10 B 125 ASP PRO LYS HIS TYR PHE LEU ILE HET MG A 201 1 HET PEU A 126 55 HET MG B 202 1 HET MG B 126 1 HET CL B 201 1 HETNAM MG MAGNESIUM ION HETNAM PEU 2,5,8,11,14,17,20,23,26,29,32,35,38,41,44,47,50,53,56, HETNAM 2 PEU 59,62,65,68,71,74,77,80-HEPTACOSAOXADOOCTACONTAN-82-OL HETNAM CL CHLORIDE ION HETSYN PEU PEG 8000 FORMUL 3 MG 3(MG 2+) FORMUL 4 PEU C55 H112 O28 FORMUL 7 CL CL 1- FORMUL 8 HOH *410(H2 O) HELIX 1 1 PRO A 12 GLY A 31 1 20 HELIX 2 2 THR A 33 GLY A 43 1 11 HELIX 3 3 ASP A 48 ALA A 62 1 15 HELIX 4 4 HIS A 72 LEU A 80 1 9 HELIX 5 5 PRO A 81 SER A 83 5 3 HELIX 6 6 MET A 84 LYS A 93 1 10 HELIX 7 7 ASN A 102 ASP A 118 1 17 HELIX 8 8 PRO B 12 GLY B 31 1 20 HELIX 9 9 THR B 33 GLY B 43 1 11 HELIX 10 10 ASP B 48 ALA B 62 1 15 HELIX 11 11 HIS B 72 LEU B 80 1 9 HELIX 12 12 PRO B 81 SER B 83 5 3 HELIX 13 13 MET B 84 LYS B 93 1 10 HELIX 14 14 ASN B 102 ASP B 118 1 17 SSBOND 1 CYS A 26 CYS A 57 1555 1555 2.07 SSBOND 2 CYS A 53 CYS A 104 1555 1555 2.04 SSBOND 3 CYS A 95 CYS A 113 1555 1555 2.05 SSBOND 4 CYS B 26 CYS B 57 1555 1555 2.09 SSBOND 5 CYS B 53 CYS B 104 1555 1555 2.08 SSBOND 6 CYS B 95 CYS B 113 1555 1555 2.06 LINK NE2 HIS A 85 MG MG A 201 1555 1555 2.34 LINK MG MG A 201 O HOH A 203 1555 1555 2.16 LINK MG MG A 201 O HOH A 204 1555 1555 2.19 LINK MG MG A 201 O HOH A 205 1555 1555 2.16 LINK MG MG A 201 O HOH A 206 1555 1555 2.16 LINK MG MG A 201 O HOH A 207 1555 1555 2.16 LINK O HIS B 77 MG MG B 126 1555 1555 2.97 LINK O LEU B 80 MG MG B 126 1555 1555 2.71 LINK ND1BHIS B 85 MG MG B 126 1555 1555 1.82 LINK MG MG B 126 O HOH B 203 1555 1555 2.18 LINK MG MG B 126 O HOH B 204 1555 1555 2.18 LINK MG MG B 202 O HOH B 208 1555 1555 2.17 LINK MG MG B 202 O HOH B 209 1555 1555 2.17 LINK MG MG B 202 O HOH B 210 1555 1555 2.18 LINK MG MG B 202 O HOH B 211 1555 1555 2.17 LINK MG MG B 202 O HOH B 212 1555 1555 2.17 CISPEP 1 TYR A 10 PRO A 11 0 -1.66 CISPEP 2 TYR B 10 PRO B 11 0 0.18 SITE 1 AC1 6 HIS A 85 HOH A 203 HOH A 204 HOH A 205 SITE 2 AC1 6 HOH A 206 HOH A 207 SITE 1 AC2 6 GLU A 47 HOH B 208 HOH B 209 HOH B 210 SITE 2 AC2 6 HOH B 211 HOH B 212 SITE 1 AC3 2 GLU A 47 LYS B 93 SITE 1 AC4 6 HIS B 77 LEU B 80 ASP B 82 HIS B 85 SITE 2 AC4 6 HOH B 203 HOH B 204 SITE 1 AC5 22 PHE A 15 MET A 19 ALA A 62 MET A 84 SITE 2 AC5 22 ALA A 88 LEU A 89 MET A 91 TRP A 114 SITE 3 AC5 22 PHE A 123 HOH A 209 HOH A 426 HOH A 481 SITE 4 AC5 22 MET B 19 ALA B 62 LEU B 76 MET B 84 SITE 5 AC5 22 ALA B 88 LEU B 89 GLY B 92 LYS B 93 SITE 6 AC5 22 PHE B 123 HOH B 495 CRYST1 34.248 47.870 69.082 90.00 96.61 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.029199 0.000000 0.003384 0.00000 SCALE2 0.000000 0.020890 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014572 0.00000