data_3K2N # _entry.id 3K2N # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.312 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3K2N RCSB RCSB055468 WWPDB D_1000055468 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id APC87569.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3K2N _pdbx_database_status.recvd_initial_deposition_date 2009-09-30 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wu, R.' 1 'Clancy, S.' 2 'Joachimiak, A.' 3 'Midwest Center for Structural Genomics (MCSG)' 4 # _citation.id primary _citation.title 'The crystal structure of sigma-54-dependent transcriptional regulator domain from Chlorobium' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wu, R.' 1 ? primary 'Clancy, S.' 2 ? primary 'Joachimiak, A.' 3 ? # _cell.entry_id 3K2N _cell.length_a 55.121 _cell.length_b 81.250 _cell.length_c 83.522 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3K2N _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Sigma-54-dependent transcriptional regulator' 19912.213 2 ? ? ? ? 2 water nat water 18.015 37 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SNAALKL(MSE)QYIGDAIGTIRDPQELFRTVTDKLRLLFAFDSAVIITIDRERREASVFFE(MSE)LRFELPEQLRHQT RSIAGTWLEGHLDDRTVTVASIARDIPSFGADGAPLLWTLHELG(MSE)RQIVLSPLRSGGRVIGFLSFVSAEEKLWSDG DKSLLSGVSSSIAIAVSNALAYEELRQRE ; _entity_poly.pdbx_seq_one_letter_code_can ;SNAALKLMQYIGDAIGTIRDPQELFRTVTDKLRLLFAFDSAVIITIDRERREASVFFEMLRFELPEQLRHQTRSIAGTWL EGHLDDRTVTVASIARDIPSFGADGAPLLWTLHELGMRQIVLSPLRSGGRVIGFLSFVSAEEKLWSDGDKSLLSGVSSSI AIAVSNALAYEELRQRE ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier APC87569.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 ALA n 1 5 LEU n 1 6 LYS n 1 7 LEU n 1 8 MSE n 1 9 GLN n 1 10 TYR n 1 11 ILE n 1 12 GLY n 1 13 ASP n 1 14 ALA n 1 15 ILE n 1 16 GLY n 1 17 THR n 1 18 ILE n 1 19 ARG n 1 20 ASP n 1 21 PRO n 1 22 GLN n 1 23 GLU n 1 24 LEU n 1 25 PHE n 1 26 ARG n 1 27 THR n 1 28 VAL n 1 29 THR n 1 30 ASP n 1 31 LYS n 1 32 LEU n 1 33 ARG n 1 34 LEU n 1 35 LEU n 1 36 PHE n 1 37 ALA n 1 38 PHE n 1 39 ASP n 1 40 SER n 1 41 ALA n 1 42 VAL n 1 43 ILE n 1 44 ILE n 1 45 THR n 1 46 ILE n 1 47 ASP n 1 48 ARG n 1 49 GLU n 1 50 ARG n 1 51 ARG n 1 52 GLU n 1 53 ALA n 1 54 SER n 1 55 VAL n 1 56 PHE n 1 57 PHE n 1 58 GLU n 1 59 MSE n 1 60 LEU n 1 61 ARG n 1 62 PHE n 1 63 GLU n 1 64 LEU n 1 65 PRO n 1 66 GLU n 1 67 GLN n 1 68 LEU n 1 69 ARG n 1 70 HIS n 1 71 GLN n 1 72 THR n 1 73 ARG n 1 74 SER n 1 75 ILE n 1 76 ALA n 1 77 GLY n 1 78 THR n 1 79 TRP n 1 80 LEU n 1 81 GLU n 1 82 GLY n 1 83 HIS n 1 84 LEU n 1 85 ASP n 1 86 ASP n 1 87 ARG n 1 88 THR n 1 89 VAL n 1 90 THR n 1 91 VAL n 1 92 ALA n 1 93 SER n 1 94 ILE n 1 95 ALA n 1 96 ARG n 1 97 ASP n 1 98 ILE n 1 99 PRO n 1 100 SER n 1 101 PHE n 1 102 GLY n 1 103 ALA n 1 104 ASP n 1 105 GLY n 1 106 ALA n 1 107 PRO n 1 108 LEU n 1 109 LEU n 1 110 TRP n 1 111 THR n 1 112 LEU n 1 113 HIS n 1 114 GLU n 1 115 LEU n 1 116 GLY n 1 117 MSE n 1 118 ARG n 1 119 GLN n 1 120 ILE n 1 121 VAL n 1 122 LEU n 1 123 SER n 1 124 PRO n 1 125 LEU n 1 126 ARG n 1 127 SER n 1 128 GLY n 1 129 GLY n 1 130 ARG n 1 131 VAL n 1 132 ILE n 1 133 GLY n 1 134 PHE n 1 135 LEU n 1 136 SER n 1 137 PHE n 1 138 VAL n 1 139 SER n 1 140 ALA n 1 141 GLU n 1 142 GLU n 1 143 LYS n 1 144 LEU n 1 145 TRP n 1 146 SER n 1 147 ASP n 1 148 GLY n 1 149 ASP n 1 150 LYS n 1 151 SER n 1 152 LEU n 1 153 LEU n 1 154 SER n 1 155 GLY n 1 156 VAL n 1 157 SER n 1 158 SER n 1 159 SER n 1 160 ILE n 1 161 ALA n 1 162 ILE n 1 163 ALA n 1 164 VAL n 1 165 SER n 1 166 ASN n 1 167 ALA n 1 168 LEU n 1 169 ALA n 1 170 TYR n 1 171 GLU n 1 172 GLU n 1 173 LEU n 1 174 ARG n 1 175 GLN n 1 176 ARG n 1 177 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'CT0108, GAF' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain taxon:194439 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Chlorobium tepidum TLS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 194439 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PDM68 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8KG60_CHLTE _struct_ref.pdbx_db_accession Q8KG60 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ALKLMQYIGDAIGTIRDPQELFRTVTDKLRLLFAFDSAVIITIDRERREASVFFEMLRFELPEQLRHQTRSIAGTWLEGH LDDRTVTVASIARDIPSFGADGAPLLWTLHELGMRQIVLSPLRSGGRVIGFLSFVSAEEKLWSDGDKSLLSGVSSSIAIA VSNALAYEELRQRE ; _struct_ref.pdbx_align_begin 30 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3K2N A 4 ? 177 ? Q8KG60 30 ? 203 ? 1 174 2 1 3K2N B 4 ? 177 ? Q8KG60 30 ? 203 ? 1 174 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3K2N SER A 1 ? UNP Q8KG60 ? ? 'expression tag' -2 1 1 3K2N ASN A 2 ? UNP Q8KG60 ? ? 'expression tag' -1 2 1 3K2N ALA A 3 ? UNP Q8KG60 ? ? 'expression tag' 0 3 2 3K2N SER B 1 ? UNP Q8KG60 ? ? 'expression tag' -2 4 2 3K2N ASN B 2 ? UNP Q8KG60 ? ? 'expression tag' -1 5 2 3K2N ALA B 3 ? UNP Q8KG60 ? ? 'expression tag' 0 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3K2N _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.35 _exptl_crystal.density_percent_sol 47.62 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.2M Na acetate, 20% PEG3k, 0.1M Na-Hepes PH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type SBC-2 _diffrn_detector.pdbx_collection_date 2007-12-18 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111, channel' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9792 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-BM' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-BM _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9792 # _reflns.entry_id 3K2N _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.50 _reflns.number_obs 16911 _reflns.number_all 17064 _reflns.percent_possible_obs 99.6 _reflns.pdbx_Rmerge_I_obs 0.103 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 4.875 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 8.9 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.58 _reflns_shell.d_res_low 2.66 _reflns_shell.percent_possible_all 99.6 _reflns_shell.Rmerge_I_obs 0.297 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 6.9 _reflns_shell.pdbx_redundancy 9.6 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3K2N _refine.ls_number_reflns_obs 13494 _refine.ls_number_reflns_all 11428 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.33 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 45.615 _refine.ls_d_res_high 2.500 _refine.ls_percent_reflns_obs 99.83 _refine.ls_R_factor_obs 0.2009 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1967 _refine.ls_R_factor_R_free 0.2803 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.02 _refine.ls_number_reflns_R_free 678 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.942 _refine.correlation_coeff_Fo_to_Fc_free 0.901 _refine.B_iso_mean 45.247 _refine.aniso_B[1][1] -1.76 _refine.aniso_B[2][2] 5.30 _refine.aniso_B[3][3] -3.55 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.327 _refine.solvent_model_param_bsol 44.885 _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.41 _refine.pdbx_overall_phase_error 29.90 _refine.overall_SU_B ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2784 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 37 _refine_hist.number_atoms_total 2821 _refine_hist.d_res_high 2.500 _refine_hist.d_res_low 45.615 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.009 ? ? 2832 'X-RAY DIFFRACTION' ? f_angle_d 1.173 ? ? 3828 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 20.249 ? ? 1042 'X-RAY DIFFRACTION' ? f_chiral_restr 0.078 ? ? 440 'X-RAY DIFFRACTION' ? f_plane_restr 0.003 ? ? 492 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 2.5002 2.6932 2515 0.2846 99.00 0.3709 . . 122 . . 'X-RAY DIFFRACTION' . 2.6932 2.9642 2497 0.2395 100.00 0.3484 . . 149 . . 'X-RAY DIFFRACTION' . 2.9642 3.3930 2537 0.2062 100.00 0.2865 . . 137 . . 'X-RAY DIFFRACTION' . 3.3930 4.2743 2579 0.1705 100.00 0.3035 . . 131 . . 'X-RAY DIFFRACTION' . 4.2743 45.6222 2688 0.1790 100.00 0.2277 . . 139 . . # _struct.entry_id 3K2N _struct.title 'The crystal structure of sigma-54-dependent transcriptional regulator domain from Chlorobium Tepidum TLS' _struct.pdbx_descriptor 'Sigma-54-dependent transcriptional regulator' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3K2N _struct_keywords.pdbx_keywords 'transcription regulator' _struct_keywords.text ;sigma-54-dependent transcriptional regulator domain, Chlorobium tepidum TLS, PSI-2, Protein Structure Initiative, Structural Genomics, Midwest Center for Structural Genomics (MCSG), ATP-binding, DNA-binding, Nucleotide-binding, Transcription, Transcription regulation, Two-component regulatory system, transcription regulator ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 1 ? GLY A 16 ? SER A -2 GLY A 13 1 ? 16 HELX_P HELX_P2 2 ASP A 20 ? ARG A 33 ? ASP A 17 ARG A 30 1 ? 14 HELX_P HELX_P3 3 THR A 78 ? LEU A 84 ? THR A 75 LEU A 81 5 ? 7 HELX_P HELX_P4 4 ALA A 106 ? GLY A 116 ? ALA A 103 GLY A 113 1 ? 11 HELX_P HELX_P5 5 SER A 146 ? GLN A 175 ? SER A 143 GLN A 172 1 ? 30 HELX_P HELX_P6 6 SER B 1 ? ILE B 18 ? SER B -2 ILE B 15 1 ? 18 HELX_P HELX_P7 7 ASP B 20 ? ARG B 33 ? ASP B 17 ARG B 30 1 ? 14 HELX_P HELX_P8 8 PRO B 65 ? ARG B 69 ? PRO B 62 ARG B 66 5 ? 5 HELX_P HELX_P9 9 LEU B 80 ? LEU B 84 ? LEU B 77 LEU B 81 5 ? 5 HELX_P HELX_P10 10 ALA B 106 ? LEU B 115 ? ALA B 103 LEU B 112 1 ? 10 HELX_P HELX_P11 11 SER B 146 ? ARG B 176 ? SER B 143 ARG B 173 1 ? 31 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale both ? A LEU 7 C ? ? ? 1_555 A MSE 8 N ? ? A LEU 4 A MSE 5 1_555 ? ? ? ? ? ? ? 1.323 ? covale2 covale both ? A MSE 8 C ? ? ? 1_555 A GLN 9 N ? ? A MSE 5 A GLN 6 1_555 ? ? ? ? ? ? ? 1.324 ? covale3 covale both ? A GLU 58 C ? ? ? 1_555 A MSE 59 N ? ? A GLU 55 A MSE 56 1_555 ? ? ? ? ? ? ? 1.324 ? covale4 covale both ? A MSE 59 C ? ? ? 1_555 A LEU 60 N ? ? A MSE 56 A LEU 57 1_555 ? ? ? ? ? ? ? 1.332 ? covale5 covale both ? A GLY 116 C ? ? ? 1_555 A MSE 117 N ? ? A GLY 113 A MSE 114 1_555 ? ? ? ? ? ? ? 1.328 ? covale6 covale both ? A MSE 117 C ? ? ? 1_555 A ARG 118 N ? ? A MSE 114 A ARG 115 1_555 ? ? ? ? ? ? ? 1.330 ? covale7 covale both ? B LEU 7 C ? ? ? 1_555 B MSE 8 N ? ? B LEU 4 B MSE 5 1_555 ? ? ? ? ? ? ? 1.330 ? covale8 covale both ? B MSE 8 C ? ? ? 1_555 B GLN 9 N ? ? B MSE 5 B GLN 6 1_555 ? ? ? ? ? ? ? 1.325 ? covale9 covale both ? B GLU 58 C ? ? ? 1_555 B MSE 59 N ? ? B GLU 55 B MSE 56 1_555 ? ? ? ? ? ? ? 1.322 ? covale10 covale both ? B MSE 59 C ? ? ? 1_555 B LEU 60 N ? ? B MSE 56 B LEU 57 1_555 ? ? ? ? ? ? ? 1.328 ? covale11 covale both ? B GLY 116 C ? ? ? 1_555 B MSE 117 N ? ? B GLY 113 B MSE 114 1_555 ? ? ? ? ? ? ? 1.335 ? covale12 covale both ? B MSE 117 C ? ? ? 1_555 B ARG 118 N ? ? B MSE 114 B ARG 115 1_555 ? ? ? ? ? ? ? 1.330 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 72 ? SER A 74 ? THR A 69 SER A 71 A 2 GLU A 52 ? MSE A 59 ? GLU A 49 MSE A 56 A 3 SER A 40 ? ASP A 47 ? SER A 37 ASP A 44 A 4 ARG A 130 ? SER A 139 ? ARG A 127 SER A 136 A 5 GLN A 119 ? SER A 127 ? GLN A 116 SER A 124 A 6 THR A 90 ? SER A 93 ? THR A 87 SER A 90 B 1 THR B 72 ? SER B 74 ? THR B 69 SER B 71 B 2 GLU B 52 ? MSE B 59 ? GLU B 49 MSE B 56 B 3 SER B 40 ? ASP B 47 ? SER B 37 ASP B 44 B 4 ARG B 130 ? SER B 139 ? ARG B 127 SER B 136 B 5 GLN B 119 ? SER B 127 ? GLN B 116 SER B 124 B 6 THR B 90 ? SER B 93 ? THR B 87 SER B 90 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ARG A 73 ? O ARG A 70 N ALA A 53 ? N ALA A 50 A 2 3 O PHE A 57 ? O PHE A 54 N ILE A 43 ? N ILE A 40 A 3 4 N VAL A 42 ? N VAL A 39 O SER A 136 ? O SER A 133 A 4 5 O LEU A 135 ? O LEU A 132 N SER A 123 ? N SER A 120 A 5 6 O LEU A 122 ? O LEU A 119 N THR A 90 ? N THR A 87 B 1 2 O ARG B 73 ? O ARG B 70 N ALA B 53 ? N ALA B 50 B 2 3 O PHE B 56 ? O PHE B 53 N ILE B 43 ? N ILE B 40 B 3 4 N ILE B 46 ? N ILE B 43 O ILE B 132 ? O ILE B 129 B 4 5 O GLY B 133 ? O GLY B 130 N LEU B 125 ? N LEU B 122 B 5 6 O LEU B 122 ? O LEU B 119 N THR B 90 ? N THR B 87 # _database_PDB_matrix.entry_id 3K2N _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3K2N _atom_sites.fract_transf_matrix[1][1] 0.018142 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012308 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011973 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -2 -2 SER SER A . n A 1 2 ASN 2 -1 -1 ASN ASN A . n A 1 3 ALA 3 0 0 ALA ALA A . n A 1 4 ALA 4 1 1 ALA ALA A . n A 1 5 LEU 5 2 2 LEU LEU A . n A 1 6 LYS 6 3 3 LYS LYS A . n A 1 7 LEU 7 4 4 LEU LEU A . n A 1 8 MSE 8 5 5 MSE MSE A . n A 1 9 GLN 9 6 6 GLN GLN A . n A 1 10 TYR 10 7 7 TYR TYR A . n A 1 11 ILE 11 8 8 ILE ILE A . n A 1 12 GLY 12 9 9 GLY GLY A . n A 1 13 ASP 13 10 10 ASP ASP A . n A 1 14 ALA 14 11 11 ALA ALA A . n A 1 15 ILE 15 12 12 ILE ILE A . n A 1 16 GLY 16 13 13 GLY GLY A . n A 1 17 THR 17 14 14 THR THR A . n A 1 18 ILE 18 15 15 ILE ILE A . n A 1 19 ARG 19 16 16 ARG ARG A . n A 1 20 ASP 20 17 17 ASP ASP A . n A 1 21 PRO 21 18 18 PRO PRO A . n A 1 22 GLN 22 19 19 GLN GLN A . n A 1 23 GLU 23 20 20 GLU GLU A . n A 1 24 LEU 24 21 21 LEU LEU A . n A 1 25 PHE 25 22 22 PHE PHE A . n A 1 26 ARG 26 23 23 ARG ARG A . n A 1 27 THR 27 24 24 THR THR A . n A 1 28 VAL 28 25 25 VAL VAL A . n A 1 29 THR 29 26 26 THR THR A . n A 1 30 ASP 30 27 27 ASP ASP A . n A 1 31 LYS 31 28 28 LYS LYS A . n A 1 32 LEU 32 29 29 LEU LEU A . n A 1 33 ARG 33 30 30 ARG ARG A . n A 1 34 LEU 34 31 31 LEU LEU A . n A 1 35 LEU 35 32 32 LEU LEU A . n A 1 36 PHE 36 33 33 PHE PHE A . n A 1 37 ALA 37 34 34 ALA ALA A . n A 1 38 PHE 38 35 35 PHE PHE A . n A 1 39 ASP 39 36 36 ASP ASP A . n A 1 40 SER 40 37 37 SER SER A . n A 1 41 ALA 41 38 38 ALA ALA A . n A 1 42 VAL 42 39 39 VAL VAL A . n A 1 43 ILE 43 40 40 ILE ILE A . n A 1 44 ILE 44 41 41 ILE ILE A . n A 1 45 THR 45 42 42 THR THR A . n A 1 46 ILE 46 43 43 ILE ILE A . n A 1 47 ASP 47 44 44 ASP ASP A . n A 1 48 ARG 48 45 45 ARG ARG A . n A 1 49 GLU 49 46 46 GLU GLU A . n A 1 50 ARG 50 47 47 ARG ARG A . n A 1 51 ARG 51 48 48 ARG ARG A . n A 1 52 GLU 52 49 49 GLU GLU A . n A 1 53 ALA 53 50 50 ALA ALA A . n A 1 54 SER 54 51 51 SER SER A . n A 1 55 VAL 55 52 52 VAL VAL A . n A 1 56 PHE 56 53 53 PHE PHE A . n A 1 57 PHE 57 54 54 PHE PHE A . n A 1 58 GLU 58 55 55 GLU GLU A . n A 1 59 MSE 59 56 56 MSE MSE A . n A 1 60 LEU 60 57 57 LEU LEU A . n A 1 61 ARG 61 58 58 ARG ARG A . n A 1 62 PHE 62 59 59 PHE PHE A . n A 1 63 GLU 63 60 60 GLU GLU A . n A 1 64 LEU 64 61 61 LEU LEU A . n A 1 65 PRO 65 62 62 PRO PRO A . n A 1 66 GLU 66 63 63 GLU GLU A . n A 1 67 GLN 67 64 64 GLN GLN A . n A 1 68 LEU 68 65 65 LEU LEU A . n A 1 69 ARG 69 66 66 ARG ARG A . n A 1 70 HIS 70 67 67 HIS HIS A . n A 1 71 GLN 71 68 68 GLN GLN A . n A 1 72 THR 72 69 69 THR THR A . n A 1 73 ARG 73 70 70 ARG ARG A . n A 1 74 SER 74 71 71 SER SER A . n A 1 75 ILE 75 72 72 ILE ILE A . n A 1 76 ALA 76 73 73 ALA ALA A . n A 1 77 GLY 77 74 74 GLY GLY A . n A 1 78 THR 78 75 75 THR THR A . n A 1 79 TRP 79 76 76 TRP TRP A . n A 1 80 LEU 80 77 77 LEU LEU A . n A 1 81 GLU 81 78 78 GLU GLU A . n A 1 82 GLY 82 79 79 GLY GLY A . n A 1 83 HIS 83 80 80 HIS HIS A . n A 1 84 LEU 84 81 81 LEU LEU A . n A 1 85 ASP 85 82 82 ASP ASP A . n A 1 86 ASP 86 83 83 ASP ASP A . n A 1 87 ARG 87 84 84 ARG ARG A . n A 1 88 THR 88 85 85 THR THR A . n A 1 89 VAL 89 86 86 VAL VAL A . n A 1 90 THR 90 87 87 THR THR A . n A 1 91 VAL 91 88 88 VAL VAL A . n A 1 92 ALA 92 89 89 ALA ALA A . n A 1 93 SER 93 90 90 SER SER A . n A 1 94 ILE 94 91 91 ILE ILE A . n A 1 95 ALA 95 92 92 ALA ALA A . n A 1 96 ARG 96 93 93 ARG ARG A . n A 1 97 ASP 97 94 94 ASP ASP A . n A 1 98 ILE 98 95 95 ILE ILE A . n A 1 99 PRO 99 96 96 PRO PRO A . n A 1 100 SER 100 97 97 SER SER A . n A 1 101 PHE 101 98 98 PHE PHE A . n A 1 102 GLY 102 99 99 GLY GLY A . n A 1 103 ALA 103 100 100 ALA ALA A . n A 1 104 ASP 104 101 101 ASP ASP A . n A 1 105 GLY 105 102 102 GLY GLY A . n A 1 106 ALA 106 103 103 ALA ALA A . n A 1 107 PRO 107 104 104 PRO PRO A . n A 1 108 LEU 108 105 105 LEU LEU A . n A 1 109 LEU 109 106 106 LEU LEU A . n A 1 110 TRP 110 107 107 TRP TRP A . n A 1 111 THR 111 108 108 THR THR A . n A 1 112 LEU 112 109 109 LEU LEU A . n A 1 113 HIS 113 110 110 HIS HIS A . n A 1 114 GLU 114 111 111 GLU GLU A . n A 1 115 LEU 115 112 112 LEU LEU A . n A 1 116 GLY 116 113 113 GLY GLY A . n A 1 117 MSE 117 114 114 MSE MSE A . n A 1 118 ARG 118 115 115 ARG ARG A . n A 1 119 GLN 119 116 116 GLN GLN A . n A 1 120 ILE 120 117 117 ILE ILE A . n A 1 121 VAL 121 118 118 VAL VAL A . n A 1 122 LEU 122 119 119 LEU LEU A . n A 1 123 SER 123 120 120 SER SER A . n A 1 124 PRO 124 121 121 PRO PRO A . n A 1 125 LEU 125 122 122 LEU LEU A . n A 1 126 ARG 126 123 123 ARG ARG A . n A 1 127 SER 127 124 124 SER SER A . n A 1 128 GLY 128 125 125 GLY GLY A . n A 1 129 GLY 129 126 126 GLY GLY A . n A 1 130 ARG 130 127 127 ARG ARG A . n A 1 131 VAL 131 128 128 VAL VAL A . n A 1 132 ILE 132 129 129 ILE ILE A . n A 1 133 GLY 133 130 130 GLY GLY A . n A 1 134 PHE 134 131 131 PHE PHE A . n A 1 135 LEU 135 132 132 LEU LEU A . n A 1 136 SER 136 133 133 SER SER A . n A 1 137 PHE 137 134 134 PHE PHE A . n A 1 138 VAL 138 135 135 VAL VAL A . n A 1 139 SER 139 136 136 SER SER A . n A 1 140 ALA 140 137 137 ALA ALA A . n A 1 141 GLU 141 138 138 GLU GLU A . n A 1 142 GLU 142 139 139 GLU GLU A . n A 1 143 LYS 143 140 140 LYS LYS A . n A 1 144 LEU 144 141 141 LEU LEU A . n A 1 145 TRP 145 142 142 TRP TRP A . n A 1 146 SER 146 143 143 SER SER A . n A 1 147 ASP 147 144 144 ASP ASP A . n A 1 148 GLY 148 145 145 GLY GLY A . n A 1 149 ASP 149 146 146 ASP ASP A . n A 1 150 LYS 150 147 147 LYS LYS A . n A 1 151 SER 151 148 148 SER SER A . n A 1 152 LEU 152 149 149 LEU LEU A . n A 1 153 LEU 153 150 150 LEU LEU A . n A 1 154 SER 154 151 151 SER SER A . n A 1 155 GLY 155 152 152 GLY GLY A . n A 1 156 VAL 156 153 153 VAL VAL A . n A 1 157 SER 157 154 154 SER SER A . n A 1 158 SER 158 155 155 SER SER A . n A 1 159 SER 159 156 156 SER SER A . n A 1 160 ILE 160 157 157 ILE ILE A . n A 1 161 ALA 161 158 158 ALA ALA A . n A 1 162 ILE 162 159 159 ILE ILE A . n A 1 163 ALA 163 160 160 ALA ALA A . n A 1 164 VAL 164 161 161 VAL VAL A . n A 1 165 SER 165 162 162 SER SER A . n A 1 166 ASN 166 163 163 ASN ASN A . n A 1 167 ALA 167 164 164 ALA ALA A . n A 1 168 LEU 168 165 165 LEU LEU A . n A 1 169 ALA 169 166 166 ALA ALA A . n A 1 170 TYR 170 167 167 TYR TYR A . n A 1 171 GLU 171 168 168 GLU GLU A . n A 1 172 GLU 172 169 169 GLU GLU A . n A 1 173 LEU 173 170 170 LEU LEU A . n A 1 174 ARG 174 171 171 ARG ARG A . n A 1 175 GLN 175 172 172 GLN GLN A . n A 1 176 ARG 176 173 173 ARG ARG A . n A 1 177 GLU 177 174 174 GLU GLU A . n B 1 1 SER 1 -2 -2 SER SER B . n B 1 2 ASN 2 -1 -1 ASN ASN B . n B 1 3 ALA 3 0 0 ALA ALA B . n B 1 4 ALA 4 1 1 ALA ALA B . n B 1 5 LEU 5 2 2 LEU LEU B . n B 1 6 LYS 6 3 3 LYS LYS B . n B 1 7 LEU 7 4 4 LEU LEU B . n B 1 8 MSE 8 5 5 MSE MSE B . n B 1 9 GLN 9 6 6 GLN GLN B . n B 1 10 TYR 10 7 7 TYR TYR B . n B 1 11 ILE 11 8 8 ILE ILE B . n B 1 12 GLY 12 9 9 GLY GLY B . n B 1 13 ASP 13 10 10 ASP ASP B . n B 1 14 ALA 14 11 11 ALA ALA B . n B 1 15 ILE 15 12 12 ILE ILE B . n B 1 16 GLY 16 13 13 GLY GLY B . n B 1 17 THR 17 14 14 THR THR B . n B 1 18 ILE 18 15 15 ILE ILE B . n B 1 19 ARG 19 16 16 ARG ARG B . n B 1 20 ASP 20 17 17 ASP ASP B . n B 1 21 PRO 21 18 18 PRO PRO B . n B 1 22 GLN 22 19 19 GLN GLN B . n B 1 23 GLU 23 20 20 GLU GLU B . n B 1 24 LEU 24 21 21 LEU LEU B . n B 1 25 PHE 25 22 22 PHE PHE B . n B 1 26 ARG 26 23 23 ARG ARG B . n B 1 27 THR 27 24 24 THR THR B . n B 1 28 VAL 28 25 25 VAL VAL B . n B 1 29 THR 29 26 26 THR THR B . n B 1 30 ASP 30 27 27 ASP ASP B . n B 1 31 LYS 31 28 28 LYS LYS B . n B 1 32 LEU 32 29 29 LEU LEU B . n B 1 33 ARG 33 30 30 ARG ARG B . n B 1 34 LEU 34 31 31 LEU LEU B . n B 1 35 LEU 35 32 32 LEU LEU B . n B 1 36 PHE 36 33 33 PHE PHE B . n B 1 37 ALA 37 34 34 ALA ALA B . n B 1 38 PHE 38 35 35 PHE PHE B . n B 1 39 ASP 39 36 36 ASP ASP B . n B 1 40 SER 40 37 37 SER SER B . n B 1 41 ALA 41 38 38 ALA ALA B . n B 1 42 VAL 42 39 39 VAL VAL B . n B 1 43 ILE 43 40 40 ILE ILE B . n B 1 44 ILE 44 41 41 ILE ILE B . n B 1 45 THR 45 42 42 THR THR B . n B 1 46 ILE 46 43 43 ILE ILE B . n B 1 47 ASP 47 44 44 ASP ASP B . n B 1 48 ARG 48 45 45 ARG ARG B . n B 1 49 GLU 49 46 46 GLU GLU B . n B 1 50 ARG 50 47 47 ARG ARG B . n B 1 51 ARG 51 48 48 ARG ARG B . n B 1 52 GLU 52 49 49 GLU GLU B . n B 1 53 ALA 53 50 50 ALA ALA B . n B 1 54 SER 54 51 51 SER SER B . n B 1 55 VAL 55 52 52 VAL VAL B . n B 1 56 PHE 56 53 53 PHE PHE B . n B 1 57 PHE 57 54 54 PHE PHE B . n B 1 58 GLU 58 55 55 GLU GLU B . n B 1 59 MSE 59 56 56 MSE MSE B . n B 1 60 LEU 60 57 57 LEU LEU B . n B 1 61 ARG 61 58 58 ARG ARG B . n B 1 62 PHE 62 59 59 PHE PHE B . n B 1 63 GLU 63 60 60 GLU GLU B . n B 1 64 LEU 64 61 61 LEU LEU B . n B 1 65 PRO 65 62 62 PRO PRO B . n B 1 66 GLU 66 63 63 GLU GLU B . n B 1 67 GLN 67 64 64 GLN GLN B . n B 1 68 LEU 68 65 65 LEU LEU B . n B 1 69 ARG 69 66 66 ARG ARG B . n B 1 70 HIS 70 67 67 HIS HIS B . n B 1 71 GLN 71 68 68 GLN GLN B . n B 1 72 THR 72 69 69 THR THR B . n B 1 73 ARG 73 70 70 ARG ARG B . n B 1 74 SER 74 71 71 SER SER B . n B 1 75 ILE 75 72 72 ILE ILE B . n B 1 76 ALA 76 73 73 ALA ALA B . n B 1 77 GLY 77 74 74 GLY GLY B . n B 1 78 THR 78 75 75 THR THR B . n B 1 79 TRP 79 76 76 TRP TRP B . n B 1 80 LEU 80 77 77 LEU LEU B . n B 1 81 GLU 81 78 78 GLU GLU B . n B 1 82 GLY 82 79 79 GLY GLY B . n B 1 83 HIS 83 80 80 HIS HIS B . n B 1 84 LEU 84 81 81 LEU LEU B . n B 1 85 ASP 85 82 82 ASP ASP B . n B 1 86 ASP 86 83 83 ASP ASP B . n B 1 87 ARG 87 84 84 ARG ARG B . n B 1 88 THR 88 85 85 THR THR B . n B 1 89 VAL 89 86 86 VAL VAL B . n B 1 90 THR 90 87 87 THR THR B . n B 1 91 VAL 91 88 88 VAL VAL B . n B 1 92 ALA 92 89 89 ALA ALA B . n B 1 93 SER 93 90 90 SER SER B . n B 1 94 ILE 94 91 91 ILE ILE B . n B 1 95 ALA 95 92 92 ALA ALA B . n B 1 96 ARG 96 93 93 ARG ARG B . n B 1 97 ASP 97 94 94 ASP ASP B . n B 1 98 ILE 98 95 95 ILE ILE B . n B 1 99 PRO 99 96 96 PRO PRO B . n B 1 100 SER 100 97 97 SER SER B . n B 1 101 PHE 101 98 98 PHE PHE B . n B 1 102 GLY 102 99 99 GLY GLY B . n B 1 103 ALA 103 100 100 ALA ALA B . n B 1 104 ASP 104 101 101 ASP ASP B . n B 1 105 GLY 105 102 102 GLY GLY B . n B 1 106 ALA 106 103 103 ALA ALA B . n B 1 107 PRO 107 104 104 PRO PRO B . n B 1 108 LEU 108 105 105 LEU LEU B . n B 1 109 LEU 109 106 106 LEU LEU B . n B 1 110 TRP 110 107 107 TRP TRP B . n B 1 111 THR 111 108 108 THR THR B . n B 1 112 LEU 112 109 109 LEU LEU B . n B 1 113 HIS 113 110 110 HIS HIS B . n B 1 114 GLU 114 111 111 GLU GLU B . n B 1 115 LEU 115 112 112 LEU LEU B . n B 1 116 GLY 116 113 113 GLY GLY B . n B 1 117 MSE 117 114 114 MSE MSE B . n B 1 118 ARG 118 115 115 ARG ARG B . n B 1 119 GLN 119 116 116 GLN GLN B . n B 1 120 ILE 120 117 117 ILE ILE B . n B 1 121 VAL 121 118 118 VAL VAL B . n B 1 122 LEU 122 119 119 LEU LEU B . n B 1 123 SER 123 120 120 SER SER B . n B 1 124 PRO 124 121 121 PRO PRO B . n B 1 125 LEU 125 122 122 LEU LEU B . n B 1 126 ARG 126 123 123 ARG ARG B . n B 1 127 SER 127 124 124 SER SER B . n B 1 128 GLY 128 125 125 GLY GLY B . n B 1 129 GLY 129 126 126 GLY GLY B . n B 1 130 ARG 130 127 127 ARG ARG B . n B 1 131 VAL 131 128 128 VAL VAL B . n B 1 132 ILE 132 129 129 ILE ILE B . n B 1 133 GLY 133 130 130 GLY GLY B . n B 1 134 PHE 134 131 131 PHE PHE B . n B 1 135 LEU 135 132 132 LEU LEU B . n B 1 136 SER 136 133 133 SER SER B . n B 1 137 PHE 137 134 134 PHE PHE B . n B 1 138 VAL 138 135 135 VAL VAL B . n B 1 139 SER 139 136 136 SER SER B . n B 1 140 ALA 140 137 137 ALA ALA B . n B 1 141 GLU 141 138 138 GLU GLU B . n B 1 142 GLU 142 139 139 GLU GLU B . n B 1 143 LYS 143 140 140 LYS LYS B . n B 1 144 LEU 144 141 141 LEU LEU B . n B 1 145 TRP 145 142 142 TRP TRP B . n B 1 146 SER 146 143 143 SER SER B . n B 1 147 ASP 147 144 144 ASP ASP B . n B 1 148 GLY 148 145 145 GLY GLY B . n B 1 149 ASP 149 146 146 ASP ASP B . n B 1 150 LYS 150 147 147 LYS LYS B . n B 1 151 SER 151 148 148 SER SER B . n B 1 152 LEU 152 149 149 LEU LEU B . n B 1 153 LEU 153 150 150 LEU LEU B . n B 1 154 SER 154 151 151 SER SER B . n B 1 155 GLY 155 152 152 GLY GLY B . n B 1 156 VAL 156 153 153 VAL VAL B . n B 1 157 SER 157 154 154 SER SER B . n B 1 158 SER 158 155 155 SER SER B . n B 1 159 SER 159 156 156 SER SER B . n B 1 160 ILE 160 157 157 ILE ILE B . n B 1 161 ALA 161 158 158 ALA ALA B . n B 1 162 ILE 162 159 159 ILE ILE B . n B 1 163 ALA 163 160 160 ALA ALA B . n B 1 164 VAL 164 161 161 VAL VAL B . n B 1 165 SER 165 162 162 SER SER B . n B 1 166 ASN 166 163 163 ASN ASN B . n B 1 167 ALA 167 164 164 ALA ALA B . n B 1 168 LEU 168 165 165 LEU LEU B . n B 1 169 ALA 169 166 166 ALA ALA B . n B 1 170 TYR 170 167 167 TYR TYR B . n B 1 171 GLU 171 168 168 GLU GLU B . n B 1 172 GLU 172 169 169 GLU GLU B . n B 1 173 LEU 173 170 170 LEU LEU B . n B 1 174 ARG 174 171 171 ARG ARG B . n B 1 175 GLN 175 172 172 GLN GLN B . n B 1 176 ARG 176 173 173 ARG ARG B . n B 1 177 GLU 177 174 174 GLU GLU B . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 175 1 HOH HOH A . C 2 HOH 2 176 2 HOH HOH A . C 2 HOH 3 177 3 HOH HOH A . C 2 HOH 4 178 4 HOH HOH A . C 2 HOH 5 179 5 HOH HOH A . C 2 HOH 6 180 6 HOH HOH A . C 2 HOH 7 181 7 HOH HOH A . C 2 HOH 8 182 8 HOH HOH A . C 2 HOH 9 183 9 HOH HOH A . C 2 HOH 10 184 10 HOH HOH A . C 2 HOH 11 185 23 HOH HOH A . C 2 HOH 12 186 26 HOH HOH A . C 2 HOH 13 187 27 HOH HOH A . C 2 HOH 14 188 28 HOH HOH A . C 2 HOH 15 189 29 HOH HOH A . C 2 HOH 16 190 31 HOH HOH A . C 2 HOH 17 191 32 HOH HOH A . D 2 HOH 1 175 11 HOH HOH B . D 2 HOH 2 176 12 HOH HOH B . D 2 HOH 3 177 13 HOH HOH B . D 2 HOH 4 178 14 HOH HOH B . D 2 HOH 5 179 15 HOH HOH B . D 2 HOH 6 180 16 HOH HOH B . D 2 HOH 7 181 17 HOH HOH B . D 2 HOH 8 182 18 HOH HOH B . D 2 HOH 9 183 19 HOH HOH B . D 2 HOH 10 184 20 HOH HOH B . D 2 HOH 11 185 21 HOH HOH B . D 2 HOH 12 186 22 HOH HOH B . D 2 HOH 13 187 24 HOH HOH B . D 2 HOH 14 188 25 HOH HOH B . D 2 HOH 15 189 30 HOH HOH B . D 2 HOH 16 190 33 HOH HOH B . D 2 HOH 17 191 34 HOH HOH B . D 2 HOH 18 192 35 HOH HOH B . D 2 HOH 19 193 36 HOH HOH B . D 2 HOH 20 194 37 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 8 A MSE 5 ? MET SELENOMETHIONINE 2 A MSE 59 A MSE 56 ? MET SELENOMETHIONINE 3 A MSE 117 A MSE 114 ? MET SELENOMETHIONINE 4 B MSE 8 B MSE 5 ? MET SELENOMETHIONINE 5 B MSE 59 B MSE 56 ? MET SELENOMETHIONINE 6 B MSE 117 B MSE 114 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2340 ? 1 MORE -10 ? 1 'SSA (A^2)' 17860 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-01-19 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2019-07-17 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Derived calculations' 4 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 3 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 3 'Structure model' '_software.version' 4 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 24.2024 39.5673 34.1165 0.2840 0.3180 0.2436 0.0234 -0.0419 0.0263 1.8601 0.9192 1.1759 0.2874 -0.5223 0.2499 0.0542 0.3114 0.0573 -0.1546 -0.0804 -0.0529 0.0301 -0.0440 0.0232 'X-RAY DIFFRACTION' 2 ? ? ? ? ? 0.2454 0.3043 0.2390 -0.0603 -0.0564 0.0097 1.2467 1.0060 1.7376 0.1019 -0.3089 0.4854 0.0362 0.2590 -0.1103 -0.0136 0.0637 0.1169 -0.0089 -0.1727 -0.0490 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details 'chain B' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHENIX refinement 1.5_2 ? 1 MLPHARE phasing . ? 2 REFMAC refinement 5.5.0054 ? 3 HKL-3000 'data reduction' . ? 4 HKL-3000 'data scaling' . ? 5 HKL-3000 'data collection' . ? 6 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 14 ? ? -128.89 -61.81 2 1 ASP A 101 ? ? -67.97 -87.13 3 1 ASP B 101 ? ? -64.84 1.10 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #