HEADER HYDROLASE 30-SEP-09 3K2P TITLE HIV-1 REVERSE TRANSCRIPTASE ISOLATED RNASEH DOMAIN WITH THE INHIBITOR TITLE 2 BETA-THUJAPLICINOL BOUND AT THE ACTIVE SITE COMPND MOL_ID: 1; COMPND 2 MOLECULE: REVERSE TRANSCRIPTASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: REVERSE TRANSCRIPTASE/RIBONUCLEASE H, P66 RT; COMPND 5 EC: 3.1.26.4; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS TYPE 1; SOURCE 3 ORGANISM_COMMON: HIV-1; SOURCE 4 ORGANISM_TAXID: 11678; SOURCE 5 STRAIN: BH10; SOURCE 6 GENE: GAG-POL; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS RNASE H INHIBITOR, REVERSE TRANSCRIPTASE, AIDS, HIV, PROTEIN- KEYWDS 2 INHIBITOR COMPLEX, STRUCTURE-BASED DRUG DESIGN, TROPOLONES, KEYWDS 3 TROPYLIUM ION, DIVALENT CATION CHELATOR, METAL-BINDING, RNA-BINDING, KEYWDS 4 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR T.A.PAULY,D.M.HIMMEL,K.MAEGLEY,E.ARNOLD REVDAT 2 21-FEB-24 3K2P 1 REMARK SEQADV LINK REVDAT 1 09-FEB-10 3K2P 0 JRNL AUTH D.M.HIMMEL,K.A.MAEGLEY,T.A.PAULY,J.D.BAUMAN,K.DAS,C.DHARIA, JRNL AUTH 2 A.D.CLARK,K.RYAN,M.J.HICKEY,R.A.LOVE,S.H.HUGHES,S.BERGQVIST, JRNL AUTH 3 E.ARNOLD JRNL TITL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE WITH THE INHIBITOR JRNL TITL 2 BETA-THUJAPLICINOL BOUND AT THE RNASE H ACTIVE SITE. JRNL REF STRUCTURE V. 17 1625 2009 JRNL REFN ISSN 0969-2126 JRNL PMID 20004166 JRNL DOI 10.1016/J.STR.2009.09.016 REMARK 2 REMARK 2 RESOLUTION. 2.04 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.4.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.04 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.28 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 19700 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.227 REMARK 3 R VALUE (WORKING SET) : 0.226 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1057 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.04 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.09 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1305 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.13 REMARK 3 BIN R VALUE (WORKING SET) : 0.2990 REMARK 3 BIN FREE R VALUE SET COUNT : 68 REMARK 3 BIN FREE R VALUE : 0.4110 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2030 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 168 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.22000 REMARK 3 B22 (A**2) : 0.22000 REMARK 3 B33 (A**2) : -0.33000 REMARK 3 B12 (A**2) : 0.11000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.196 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.175 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.125 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.565 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.928 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2082 ; 0.022 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2818 ; 2.155 ; 1.988 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 260 ; 7.136 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 90 ;43.759 ;27.111 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 382 ;20.914 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;16.337 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 326 ; 0.221 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1544 ; 0.012 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1296 ; 1.497 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2090 ; 2.487 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 786 ; 3.903 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 728 ; 5.976 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3K2P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-OCT-09. REMARK 100 THE DEPOSITION ID IS D_1000055470. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20314 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.040 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M FORMATE PH 7.0, 10% PEG 3350, REMARK 280 10MM MNCL2, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 37.47833 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 74.95667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1590 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 425 REMARK 465 LEU A 426 REMARK 465 LYS A 558 REMARK 465 ILE A 559 REMARK 465 LEU A 560 REMARK 465 ALA B 425 REMARK 465 LEU B 426 REMARK 465 LYS B 558 REMARK 465 ILE B 559 REMARK 465 LEU B 560 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 479 CA - CB - CG ANGL. DEV. = 14.7 DEGREES REMARK 500 THR A 497 CB - CA - C ANGL. DEV. = -22.9 DEGREES REMARK 500 ARG B 463 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 LEU B 479 CA - CB - CG ANGL. DEV. = 15.6 DEGREES REMARK 500 THR B 497 CB - CA - C ANGL. DEV. = -19.2 DEGREES REMARK 500 ASP B 498 CB - CG - OD2 ANGL. DEV. = -6.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 471 61.46 69.01 REMARK 500 SER A 489 -79.22 -82.54 REMARK 500 ASN B 471 66.07 62.11 REMARK 500 SER B 489 -79.26 -88.03 REMARK 500 ALA B 554 116.21 -35.87 REMARK 500 ILE B 556 -51.75 -124.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 901 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 443 OD1 REMARK 620 2 GLU A 478 OE2 83.9 REMARK 620 3 ASP A 498 OD1 104.2 106.5 REMARK 620 4 JTH A1001 O1 96.8 133.6 117.9 REMARK 620 5 JTH A1001 O7 162.7 97.9 91.9 69.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 902 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 443 OD2 REMARK 620 2 ASP A 549 OD2 101.4 REMARK 620 3 JTH A1001 O2 171.7 85.9 REMARK 620 4 JTH A1001 O1 98.9 159.7 74.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 901 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 443 OD1 REMARK 620 2 GLU B 478 OE2 81.9 REMARK 620 3 ASP B 498 OD1 110.7 110.5 REMARK 620 4 JTH B1001 O7 155.2 91.6 94.1 REMARK 620 5 JTH B1001 O1 96.0 125.3 120.9 68.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 902 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 443 OD2 REMARK 620 2 ASP B 549 OD2 105.6 REMARK 620 3 JTH B1001 O1 104.9 149.4 REMARK 620 4 JTH B1001 O2 172.3 80.7 68.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE JTH A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE JTH B 1001 DBREF 3K2P A 427 560 UNP P03366 POL_HV1B1 1026 1159 DBREF 3K2P B 427 560 UNP P03366 POL_HV1B1 1026 1159 SEQADV 3K2P ALA A 425 UNP P03366 EXPRESSION TAG SEQADV 3K2P LEU A 426 UNP P03366 EXPRESSION TAG SEQADV 3K2P ALA B 425 UNP P03366 EXPRESSION TAG SEQADV 3K2P LEU B 426 UNP P03366 EXPRESSION TAG SEQRES 1 A 136 ALA LEU TYR GLN LEU GLU LYS GLU PRO ILE VAL GLY ALA SEQRES 2 A 136 GLU THR PHE TYR VAL ASP GLY ALA ALA ASN ARG GLU THR SEQRES 3 A 136 LYS LEU GLY LYS ALA GLY TYR VAL THR ASN LYS GLY ARG SEQRES 4 A 136 GLN LYS VAL VAL PRO LEU THR ASN THR THR ASN GLN LYS SEQRES 5 A 136 THR GLU LEU GLN ALA ILE TYR LEU ALA LEU GLN ASP SER SEQRES 6 A 136 GLY LEU GLU VAL ASN ILE VAL THR ASP SER GLN TYR ALA SEQRES 7 A 136 LEU GLY ILE ILE GLN ALA GLN PRO ASP LYS SER GLU SER SEQRES 8 A 136 GLU LEU VAL ASN GLN ILE ILE GLU GLN LEU ILE LYS LYS SEQRES 9 A 136 GLU LYS VAL TYR LEU ALA TRP VAL PRO ALA HIS LYS GLY SEQRES 10 A 136 ILE GLY GLY ASN GLU GLN VAL ASP LYS LEU VAL SER ALA SEQRES 11 A 136 GLY ILE ARG LYS ILE LEU SEQRES 1 B 136 ALA LEU TYR GLN LEU GLU LYS GLU PRO ILE VAL GLY ALA SEQRES 2 B 136 GLU THR PHE TYR VAL ASP GLY ALA ALA ASN ARG GLU THR SEQRES 3 B 136 LYS LEU GLY LYS ALA GLY TYR VAL THR ASN LYS GLY ARG SEQRES 4 B 136 GLN LYS VAL VAL PRO LEU THR ASN THR THR ASN GLN LYS SEQRES 5 B 136 THR GLU LEU GLN ALA ILE TYR LEU ALA LEU GLN ASP SER SEQRES 6 B 136 GLY LEU GLU VAL ASN ILE VAL THR ASP SER GLN TYR ALA SEQRES 7 B 136 LEU GLY ILE ILE GLN ALA GLN PRO ASP LYS SER GLU SER SEQRES 8 B 136 GLU LEU VAL ASN GLN ILE ILE GLU GLN LEU ILE LYS LYS SEQRES 9 B 136 GLU LYS VAL TYR LEU ALA TRP VAL PRO ALA HIS LYS GLY SEQRES 10 B 136 ILE GLY GLY ASN GLU GLN VAL ASP LYS LEU VAL SER ALA SEQRES 11 B 136 GLY ILE ARG LYS ILE LEU HET MN A 901 1 HET MN A 902 1 HET JTH A1001 13 HET MN B 901 1 HET MN B 902 1 HET JTH B1001 13 HETNAM MN MANGANESE (II) ION HETNAM JTH 2,7-DIHYDROXY-4-(PROPAN-2-YL)CYCLOHEPTA-2,4,6-TRIEN-1- HETNAM 2 JTH ONE HETSYN JTH BETA-THUJAPLICINOL FORMUL 3 MN 4(MN 2+) FORMUL 5 JTH 2(C10 H12 O3) FORMUL 9 HOH *168(H2 O) HELIX 1 1 THR A 473 ASP A 488 1 16 HELIX 2 2 SER A 499 ALA A 508 1 10 HELIX 3 3 SER A 515 LYS A 528 1 14 HELIX 4 4 ILE A 542 ALA A 554 1 13 HELIX 5 5 THR B 473 ASP B 488 1 16 HELIX 6 6 SER B 499 ALA B 508 1 10 HELIX 7 7 SER B 515 LYS B 528 1 14 HELIX 8 8 ILE B 542 ALA B 554 1 13 SHEET 1 A 5 GLN A 464 LEU A 469 0 SHEET 2 A 5 GLY A 453 THR A 459 -1 N GLY A 453 O LEU A 469 SHEET 3 A 5 THR A 439 ALA A 446 -1 N TYR A 441 O VAL A 458 SHEET 4 A 5 GLU A 492 THR A 497 1 O ASN A 494 N PHE A 440 SHEET 5 A 5 LYS A 530 TRP A 535 1 O TYR A 532 N ILE A 495 SHEET 1 B 5 GLN B 464 THR B 470 0 SHEET 2 B 5 LEU B 452 THR B 459 -1 N GLY B 453 O LEU B 469 SHEET 3 B 5 GLU B 438 ALA B 446 -1 N TYR B 441 O VAL B 458 SHEET 4 B 5 GLU B 492 THR B 497 1 O ASN B 494 N PHE B 440 SHEET 5 B 5 LYS B 530 TRP B 535 1 O TYR B 532 N ILE B 495 LINK OD1 ASP A 443 MN MN A 901 1555 1555 2.29 LINK OD2 ASP A 443 MN MN A 902 1555 1555 2.24 LINK OE2 GLU A 478 MN MN A 901 1555 1555 1.82 LINK OD1 ASP A 498 MN MN A 901 1555 1555 2.11 LINK OD2 ASP A 549 MN MN A 902 1555 1555 2.16 LINK MN MN A 901 O1 JTH A1001 1555 1555 2.04 LINK MN MN A 901 O7 JTH A1001 1555 1555 2.22 LINK MN MN A 902 O2 JTH A1001 1555 1555 2.18 LINK MN MN A 902 O1 JTH A1001 1555 1555 2.26 LINK OD1 ASP B 443 MN MN B 901 1555 1555 2.39 LINK OD2 ASP B 443 MN MN B 902 1555 1555 2.24 LINK OE2 GLU B 478 MN MN B 901 1555 1555 1.91 LINK OD1 ASP B 498 MN MN B 901 1555 1555 2.12 LINK OD2 ASP B 549 MN MN B 902 1555 1555 2.20 LINK MN MN B 901 O7 JTH B1001 1555 1555 2.29 LINK MN MN B 901 O1 JTH B1001 1555 1555 2.32 LINK MN MN B 902 O1 JTH B1001 1555 1555 2.18 LINK MN MN B 902 O2 JTH B1001 1555 1555 2.54 SITE 1 AC1 4 ASP A 443 GLU A 478 ASP A 498 JTH A1001 SITE 1 AC2 4 ASP A 443 ASP A 549 ARG A 557 JTH A1001 SITE 1 AC3 10 HOH A 159 HOH A 217 ASP A 443 GLU A 478 SITE 2 AC3 10 ASP A 498 HIS A 539 ASP A 549 ARG A 557 SITE 3 AC3 10 MN A 901 MN A 902 SITE 1 AC4 4 ASP B 443 GLU B 478 ASP B 498 JTH B1001 SITE 1 AC5 4 ASP B 443 ASP B 549 ARG B 557 JTH B1001 SITE 1 AC6 9 HOH B 132 ASP B 443 GLU B 478 ASP B 498 SITE 2 AC6 9 HIS B 539 ASP B 549 ARG B 557 MN B 901 SITE 3 AC6 9 MN B 902 CRYST1 51.143 51.143 112.435 90.00 90.00 120.00 P 31 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019553 0.011289 0.000000 0.00000 SCALE2 0.000000 0.022578 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008894 0.00000