HEADER TRANSPORT PROTEIN 09-OCT-09 3K6W TITLE APO AND LIGAND BOUND STRUCTURES OF MODA FROM THE ARCHAEON TITLE 2 METHANOSARCINA ACETIVORANS COMPND MOL_ID: 1; COMPND 2 MOLECULE: SOLUTE-BINDING PROTEIN MA_0280; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOSARCINA ACETIVORANS; SOURCE 3 ORGANISM_TAXID: 2214; SOURCE 4 STRAIN: C2A; SOURCE 5 GENE: MA0280, MA_0280; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-GOLD (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PETM-11 KEYWDS MODA, MOLYBDATE, METHANOSARCINA ACETIVORANS, PERIPLASMIC BINDING KEYWDS 2 PROTEIN, ABC TRANSPORTER, TRANSPORT PROTEIN, LIGAND, METAL-BINDING KEYWDS 3 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.CHAN,I.CHERNISHOF,I.GIUROIU,M.R.SAWAYA,J.CHIANG,R.P.GUNSALUS, AUTHOR 2 M.A.ARBING,L.J.PERRY REVDAT 5 21-FEB-24 3K6W 1 REMARK SEQADV REVDAT 4 01-NOV-17 3K6W 1 REMARK REVDAT 3 13-JUL-11 3K6W 1 VERSN REVDAT 2 23-MAR-10 3K6W 1 JRNL REVDAT 1 12-JAN-10 3K6W 0 JRNL AUTH S.CHAN,I.GIUROIU,I.CHERNISHOF,M.R.SAWAYA,J.CHIANG, JRNL AUTH 2 R.P.GUNSALUS,M.A.ARBING,L.J.PERRY JRNL TITL APO AND LIGAND-BOUND STRUCTURES OF MODA FROM THE ARCHAEON JRNL TITL 2 METHANOSARCINA ACETIVORANS JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 66 242 2010 JRNL REFN ESSN 1744-3091 JRNL PMID 20208152 JRNL DOI 10.1107/S1744309109055158 REMARK 2 REMARK 2 RESOLUTION. 2.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 54.07 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.8 REMARK 3 NUMBER OF REFLECTIONS : 13107 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 681 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.45 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.51 REMARK 3 REFLECTION IN BIN (WORKING SET) : 895 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.61 REMARK 3 BIN R VALUE (WORKING SET) : 0.2920 REMARK 3 BIN FREE R VALUE SET COUNT : 55 REMARK 3 BIN FREE R VALUE : 0.3470 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2416 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 28 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.05 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.51000 REMARK 3 B22 (A**2) : 2.06000 REMARK 3 B33 (A**2) : -0.26000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -3.43000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.516 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.259 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.202 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 17.964 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2482 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3389 ; 1.727 ; 1.977 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 311 ; 4.851 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 118 ;37.305 ;25.763 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 392 ;13.054 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;13.143 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 381 ; 0.101 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1913 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1559 ; 1.803 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2518 ; 2.918 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 923 ; 2.128 ; 2.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 871 ; 3.036 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 43 A 354 REMARK 3 ORIGIN FOR THE GROUP (A): 18.3706 21.4695 -7.0296 REMARK 3 T TENSOR REMARK 3 T11: 0.0819 T22: 0.1376 REMARK 3 T33: 0.1003 T12: 0.0183 REMARK 3 T13: 0.0052 T23: 0.0711 REMARK 3 L TENSOR REMARK 3 L11: 3.3758 L22: 1.5098 REMARK 3 L33: 2.0900 L12: 0.5744 REMARK 3 L13: 2.1298 L23: 0.4859 REMARK 3 S TENSOR REMARK 3 S11: -0.0084 S12: 0.4877 S13: 0.1227 REMARK 3 S21: 0.1858 S22: -0.0493 S23: -0.1934 REMARK 3 S31: 0.1273 S32: 0.2447 S33: 0.0577 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : RESIDUAL ONLY REMARK 4 REMARK 4 3K6W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-OCT-09. REMARK 100 THE DEPOSITION ID IS D_1000055621. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-APR-07; 30-APR-07 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : ALS; ALS REMARK 200 BEAMLINE : 8.2.2; 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL; NULL REMARK 200 WAVELENGTH OR RANGE (A) : 1.000; 1.000 REMARK 200 MONOCHROMATOR : NULL; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315; ADSC QUANTUM REMARK 200 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13167 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.450 REMARK 200 RESOLUTION RANGE LOW (A) : 54.070 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.7 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.08200 REMARK 200 R SYM (I) : 0.07100 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.47900 REMARK 200 R SYM FOR SHELL (I) : 0.43100 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: EPMR 2.5 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.1M AMMONIUM SULFATE, 3% (V/V) REMARK 280 ISOPROPANOL WITH FINAL CONCENTRATION OF SODIUM MOLYBDATE AT 125 REMARK 280 MM IN THE DROP, PH 8.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K. 2.1M AMMONIUM SULFATE, 1% (V/V) ISOPROPANOL REMARK 280 WITH FINAL CONCENTRATION OF SODIUM MOLYBDATE AT 125 MM IN THE REMARK 280 DROP, PH 8.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 47.25600 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.06000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 47.25600 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 33.06000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -1 REMARK 465 LYS A 0 REMARK 465 HIS A 1 REMARK 465 HIS A 2 REMARK 465 HIS A 3 REMARK 465 HIS A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 PRO A 7 REMARK 465 MET A 8 REMARK 465 SER A 9 REMARK 465 ASP A 10 REMARK 465 TYR A 11 REMARK 465 ASP A 12 REMARK 465 ILE A 13 REMARK 465 PRO A 14 REMARK 465 THR A 15 REMARK 465 THR A 16 REMARK 465 GLU A 17 REMARK 465 ASN A 18 REMARK 465 LEU A 19 REMARK 465 TYR A 20 REMARK 465 PHE A 21 REMARK 465 GLN A 22 REMARK 465 GLY A 23 REMARK 465 ALA A 24 REMARK 465 MET A 25 REMARK 465 ALA A 26 REMARK 465 ASP A 27 REMARK 465 ASN A 28 REMARK 465 GLN A 29 REMARK 465 PRO A 30 REMARK 465 GLU A 31 REMARK 465 PRO A 32 REMARK 465 GLY A 33 REMARK 465 ASN A 34 REMARK 465 THR A 35 REMARK 465 SER A 36 REMARK 465 ALA A 37 REMARK 465 GLY A 38 REMARK 465 GLU A 39 REMARK 465 GLY A 40 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 41 CG CD OE1 OE2 REMARK 470 GLU A 303 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 304 67.36 -111.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MOO A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 504 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3K6U RELATED DB: PDB REMARK 900 SAME PROTEIN IN OPEN FORM BUT WITHOUT ANY MOLECULE LIGANDED AT REMARK 900 BINDING SITE REMARK 900 RELATED ID: 3K6V RELATED DB: PDB REMARK 900 SAME PROTEIN IN OPEN FORM WITH CITRATE BOUND AT BINDING SITE REMARK 900 RELATED ID: 3K6X RELATED DB: PDB REMARK 900 SAME PROTEIN IN MOLYBDATE-BOUND CLOSE FORM WITH 2 MOLECULES IN REMARK 900 ASYMMETRIC UNIT FORMING BETA BARREL DBREF 3K6W A 27 352 UNP Q8TTZ5 Y280_METAC 27 352 SEQADV 3K6W MET A -1 UNP Q8TTZ5 EXPRESSION TAG SEQADV 3K6W LYS A 0 UNP Q8TTZ5 EXPRESSION TAG SEQADV 3K6W HIS A 1 UNP Q8TTZ5 EXPRESSION TAG SEQADV 3K6W HIS A 2 UNP Q8TTZ5 EXPRESSION TAG SEQADV 3K6W HIS A 3 UNP Q8TTZ5 EXPRESSION TAG SEQADV 3K6W HIS A 4 UNP Q8TTZ5 EXPRESSION TAG SEQADV 3K6W HIS A 5 UNP Q8TTZ5 EXPRESSION TAG SEQADV 3K6W HIS A 6 UNP Q8TTZ5 EXPRESSION TAG SEQADV 3K6W PRO A 7 UNP Q8TTZ5 EXPRESSION TAG SEQADV 3K6W MET A 8 UNP Q8TTZ5 EXPRESSION TAG SEQADV 3K6W SER A 9 UNP Q8TTZ5 EXPRESSION TAG SEQADV 3K6W ASP A 10 UNP Q8TTZ5 EXPRESSION TAG SEQADV 3K6W TYR A 11 UNP Q8TTZ5 EXPRESSION TAG SEQADV 3K6W ASP A 12 UNP Q8TTZ5 EXPRESSION TAG SEQADV 3K6W ILE A 13 UNP Q8TTZ5 EXPRESSION TAG SEQADV 3K6W PRO A 14 UNP Q8TTZ5 EXPRESSION TAG SEQADV 3K6W THR A 15 UNP Q8TTZ5 EXPRESSION TAG SEQADV 3K6W THR A 16 UNP Q8TTZ5 EXPRESSION TAG SEQADV 3K6W GLU A 17 UNP Q8TTZ5 EXPRESSION TAG SEQADV 3K6W ASN A 18 UNP Q8TTZ5 EXPRESSION TAG SEQADV 3K6W LEU A 19 UNP Q8TTZ5 EXPRESSION TAG SEQADV 3K6W TYR A 20 UNP Q8TTZ5 EXPRESSION TAG SEQADV 3K6W PHE A 21 UNP Q8TTZ5 EXPRESSION TAG SEQADV 3K6W GLN A 22 UNP Q8TTZ5 EXPRESSION TAG SEQADV 3K6W GLY A 23 UNP Q8TTZ5 EXPRESSION TAG SEQADV 3K6W ALA A 24 UNP Q8TTZ5 EXPRESSION TAG SEQADV 3K6W MET A 25 UNP Q8TTZ5 EXPRESSION TAG SEQADV 3K6W ALA A 26 UNP Q8TTZ5 EXPRESSION TAG SEQRES 1 A 354 MET LYS HIS HIS HIS HIS HIS HIS PRO MET SER ASP TYR SEQRES 2 A 354 ASP ILE PRO THR THR GLU ASN LEU TYR PHE GLN GLY ALA SEQRES 3 A 354 MET ALA ASP ASN GLN PRO GLU PRO GLY ASN THR SER ALA SEQRES 4 A 354 GLY GLU GLY GLU VAL LEU THR VAL PHE HIS ALA GLY SER SEQRES 5 A 354 LEU SER VAL PRO PHE GLU GLU LEU GLU ALA GLU PHE GLU SEQRES 6 A 354 ALA GLN HIS PRO GLY VAL ASP VAL GLN ARG GLU ALA ALA SEQRES 7 A 354 GLY SER ALA GLN SER VAL ARG LYS ILE THR GLU LEU GLY SEQRES 8 A 354 LYS LYS ALA ASP VAL LEU ALA SER ALA ASP TYR ALA LEU SEQRES 9 A 354 ILE PRO SER LEU MET VAL PRO GLU TYR ALA ASP TRP TYR SEQRES 10 A 354 ALA ALA PHE ALA ARG ASN GLN MET ILE LEU ALA TYR THR SEQRES 11 A 354 ASN GLU SER LYS TYR GLY ASP GLU ILE ASN THR ASP ASN SEQRES 12 A 354 TRP TYR GLU ILE LEU ARG ARG PRO ASP VAL ARG TYR GLY SEQRES 13 A 354 PHE SER ASN PRO ASN ASP ASP PRO ALA GLY TYR ARG SER SEQRES 14 A 354 GLN MET VAL THR GLN LEU ALA GLU SER TYR TYR ASN ASP SEQRES 15 A 354 ASP MET ILE TYR ASP ASP LEU MET LEU ALA ASN THR GLY SEQRES 16 A 354 MET THR LEU THR THR GLU GLU ASN GLY THR ALA LEU ILE SEQRES 17 A 354 HIS VAL PRO ALA SER GLU GLU ILE SER PRO ASN THR SER SEQRES 18 A 354 LYS ILE MET LEU ARG SER MET GLU VAL GLU LEU SER SER SEQRES 19 A 354 ALA LEU GLU THR GLY GLU ILE ASP TYR LEU TYR ILE TYR SEQRES 20 A 354 ARG SER VAL ALA GLU GLN HIS GLY PHE GLU TYR VAL ALA SEQRES 21 A 354 LEU PRO PRO ALA ILE ASP LEU SER SER LEU GLU TYR ALA SEQRES 22 A 354 ASP ASN TYR SER LYS VAL GLN VAL GLU MET VAL ASN GLY SEQRES 23 A 354 GLU VAL VAL THR GLY SER PRO ILE VAL TYR GLY VAL THR SEQRES 24 A 354 ILE PRO ASN ASN ALA GLU ASN SER GLU LEU ALA THR GLU SEQRES 25 A 354 PHE VAL ALA LEU LEU LEU GLY GLU THR GLY GLN GLN ILE SEQRES 26 A 354 PHE ILE GLU ASN GLY GLN PRO PRO ILE VAL PRO ALA ILE SEQRES 27 A 354 ALA GLU GLY LYS ASP SER MET PRO GLU GLU LEU GLN ALA SEQRES 28 A 354 LEU VAL VAL HET MOO A 500 5 HET SO4 A 501 5 HET SO4 A 502 5 HET SO4 A 504 5 HETNAM MOO MOLYBDATE ION HETNAM SO4 SULFATE ION HETSYN MOO MOLYBDATE FORMUL 2 MOO MO O4 2- FORMUL 3 SO4 3(O4 S 2-) FORMUL 6 HOH *28(H2 O) HELIX 1 1 LEU A 51 HIS A 66 1 16 HELIX 2 2 GLY A 77 GLU A 87 1 11 HELIX 3 3 ALA A 101 MET A 107 1 7 HELIX 4 4 ASN A 141 ARG A 148 1 8 HELIX 5 5 ASP A 161 TYR A 178 1 18 HELIX 6 6 MET A 182 MET A 188 1 7 HELIX 7 7 ALA A 210 ILE A 214 5 5 HELIX 8 8 MET A 226 GLU A 229 5 4 HELIX 9 9 LEU A 230 THR A 236 1 7 HELIX 10 10 ARG A 246 GLY A 253 1 8 HELIX 11 11 SER A 267 GLU A 269 5 3 HELIX 12 12 TYR A 270 SER A 275 1 6 HELIX 13 13 ASN A 304 GLY A 317 1 14 HELIX 14 14 GLY A 317 ASN A 327 1 11 HELIX 15 15 PRO A 344 ALA A 349 1 6 SHEET 1 A 7 ASP A 70 ALA A 75 0 SHEET 2 A 7 VAL A 42 HIS A 47 1 N VAL A 45 O GLU A 74 SHEET 3 A 7 VAL A 94 SER A 97 1 O VAL A 94 N PHE A 46 SHEET 4 A 7 VAL A 293 THR A 297 -1 O GLY A 295 N SER A 97 SHEET 5 A 7 TYR A 115 ARG A 120 -1 N ALA A 119 O TYR A 294 SHEET 6 A 7 PRO A 331 GLU A 338 -1 O ILE A 336 N ALA A 117 SHEET 7 A 7 VAL A 351 VAL A 352 1 O VAL A 352 N ALA A 335 SHEET 1 B 5 ILE A 221 ARG A 224 0 SHEET 2 B 5 TYR A 153 SER A 156 1 N TYR A 153 O MET A 222 SHEET 3 B 5 TYR A 241 TYR A 245 1 O TYR A 241 N GLY A 154 SHEET 4 B 5 MET A 123 TYR A 127 -1 N ALA A 126 O LEU A 242 SHEET 5 B 5 GLU A 255 VAL A 257 -1 O GLU A 255 N TYR A 127 SHEET 1 C 4 THR A 195 THR A 198 0 SHEET 2 C 4 ALA A 204 HIS A 207 -1 O HIS A 207 N THR A 195 SHEET 3 C 4 VAL A 277 GLU A 280 1 O GLU A 280 N ILE A 206 SHEET 4 C 4 VAL A 286 THR A 288 -1 O VAL A 287 N VAL A 279 CISPEP 1 VAL A 108 PRO A 109 0 -0.14 CISPEP 2 VAL A 333 PRO A 334 0 -0.75 SITE 1 AC1 11 ALA A 48 GLY A 49 SER A 50 GLY A 77 SITE 2 AC1 11 SER A 78 ALA A 98 ASP A 161 PRO A 162 SITE 3 AC1 11 ALA A 163 GLU A 227 TYR A 245 SITE 1 AC2 5 LYS A 90 ARG A 120 SER A 267 LEU A 268 SITE 2 AC2 5 GLU A 269 SITE 1 AC3 3 GLU A 338 GLY A 339 LYS A 340 SITE 1 AC4 2 SER A 52 ARG A 73 CRYST1 94.512 66.120 61.460 90.00 95.99 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010581 0.000000 0.001109 0.00000 SCALE2 0.000000 0.015124 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016360 0.00000