HEADER TRANSFERASE 15-OCT-09 3K9J TITLE TRANSPOSASE DOMAIN OF METNASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: SET DOMAIN AND MARINER TRANSPOSASE FUSION GENE-CONTAINING COMPND 5 PROTEIN, METNASE, HSMAR1, HISTONE-LYSINE N-METHYLTRANSFERASE, MARINER COMPND 6 TRANSPOSASE HSMAR1; COMPND 7 EC: 2.1.1.43; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SETMAR; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS TRANSPOSASE, CHROMATIN REGULATOR, DNA DAMAGE, DNA REPAIR, DNA- KEYWDS 2 BINDING, METHYLTRANSFERASE, NUCLEUS, PHOSPHOPROTEIN, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR K.D.GOODWIN,H.HE,T.IMASAKI,S.-H.LEE,M.M.GEORGIADIS REVDAT 6 21-FEB-24 3K9J 1 REMARK REVDAT 5 13-OCT-21 3K9J 1 REMARK SEQADV LINK REVDAT 4 17-JUL-19 3K9J 1 REMARK REVDAT 3 01-NOV-17 3K9J 1 REMARK REVDAT 2 21-JUL-10 3K9J 1 JRNL REVDAT 1 14-JUL-10 3K9J 0 JRNL AUTH K.D.GOODWIN,H.HE,T.IMASAKI,S.H.LEE,M.M.GEORGIADIS JRNL TITL CRYSTAL STRUCTURE OF THE HUMAN HSMAR1-DERIVED TRANSPOSASE JRNL TITL 2 DOMAIN IN THE DNA REPAIR ENZYME METNASE. JRNL REF BIOCHEMISTRY V. 49 5705 2010 JRNL REFN ISSN 0006-2960 JRNL PMID 20521842 JRNL DOI 10.1021/BI100171X REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.4_4 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.59 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.040 REMARK 3 COMPLETENESS FOR RANGE (%) : 88.5 REMARK 3 NUMBER OF REFLECTIONS : 41365 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.950 REMARK 3 FREE R VALUE TEST SET COUNT : 2047 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.5969 - 4.6904 0.97 2976 172 0.2139 0.2136 REMARK 3 2 4.6904 - 3.7235 0.99 2999 144 0.1699 0.1941 REMARK 3 3 3.7235 - 3.2530 1.00 2949 149 0.1900 0.2167 REMARK 3 4 3.2530 - 2.9556 0.99 2945 170 0.2190 0.2521 REMARK 3 5 2.9556 - 2.7438 0.98 2892 148 0.2148 0.2713 REMARK 3 6 2.7438 - 2.5821 0.97 2904 130 0.1983 0.2317 REMARK 3 7 2.5821 - 2.4528 0.95 2805 144 0.2027 0.2384 REMARK 3 8 2.4528 - 2.3460 0.94 2791 137 0.2076 0.2567 REMARK 3 9 2.3460 - 2.2557 0.92 2687 139 0.2118 0.2607 REMARK 3 10 2.2557 - 2.1779 0.89 2668 113 0.2067 0.2533 REMARK 3 11 2.1779 - 2.1098 0.85 2489 130 0.2117 0.2460 REMARK 3 12 2.1098 - 2.0495 0.80 2354 140 0.2257 0.2666 REMARK 3 13 2.0495 - 1.9955 0.74 2159 124 0.2281 0.2565 REMARK 3 14 1.9955 - 1.9468 0.69 1986 120 0.2471 0.2692 REMARK 3 15 1.9468 - 1.9030 0.58 1714 87 0.2587 0.2700 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.37 REMARK 3 B_SOL : 59.65 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.000 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.040 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.22290 REMARK 3 B22 (A**2) : -6.32610 REMARK 3 B33 (A**2) : 2.10320 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 12.44070 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3506 REMARK 3 ANGLE : 1.052 4748 REMARK 3 CHIRALITY : 0.078 497 REMARK 3 PLANARITY : 0.004 616 REMARK 3 DIHEDRAL : 18.868 1286 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3K9J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-OCT-09. REMARK 100 THE DEPOSITION ID IS D_1000055716. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JUL-08 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.10546 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL CRYO-COOLED REMARK 200 SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000, DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43992 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.2 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : 0.04600 REMARK 200 FOR THE DATA SET : 11.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : 71.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.42500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.61 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NH4OAC, CACL2, PEG4000, PH 8.0, VAPOR REMARK 280 DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 22.70550 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 433 REMARK 465 LEU A 434 REMARK 465 LYS A 435 REMARK 465 GLN A 436 REMARK 465 ILE A 437 REMARK 465 GLU A 438 REMARK 465 LYS A 439 REMARK 465 VAL A 440 REMARK 465 LYS A 441 REMARK 465 LYS A 442 REMARK 465 LEU A 443 REMARK 465 ASP A 444 REMARK 465 LYS A 445 REMARK 465 TRP A 446 REMARK 465 VAL A 447 REMARK 465 ARG A 492 REMARK 465 ARG A 493 REMARK 465 ARG A 494 REMARK 465 SER A 495 REMARK 465 ALA A 496 REMARK 465 GLN A 497 REMARK 465 TRP A 498 REMARK 465 LEU A 499 REMARK 465 ASP A 500 REMARK 465 GLN A 501 REMARK 465 GLU A 502 REMARK 465 GLU A 503 REMARK 465 ALA A 504 REMARK 465 PRO A 505 REMARK 465 LYS A 506 REMARK 465 HIS A 507 REMARK 465 PHE A 508 REMARK 465 PRO A 509 REMARK 465 LYS A 510 REMARK 465 PRO A 511 REMARK 465 ILE A 512 REMARK 465 LEU A 513 REMARK 465 HIS A 514 REMARK 465 HIS B 433 REMARK 465 LEU B 434 REMARK 465 LYS B 435 REMARK 465 GLN B 436 REMARK 465 ILE B 437 REMARK 465 GLU B 438 REMARK 465 LYS B 439 REMARK 465 ARG B 492 REMARK 465 ARG B 493 REMARK 465 ARG B 494 REMARK 465 SER B 495 REMARK 465 ALA B 496 REMARK 465 GLN B 497 REMARK 465 TRP B 498 REMARK 465 LEU B 499 REMARK 465 ASP B 500 REMARK 465 GLN B 501 REMARK 465 GLU B 502 REMARK 465 GLU B 503 REMARK 465 ALA B 504 REMARK 465 PRO B 505 REMARK 465 LYS B 506 REMARK 465 HIS B 507 REMARK 465 PHE B 508 REMARK 465 PRO B 509 REMARK 465 LYS B 510 REMARK 465 PRO B 511 REMARK 465 ILE B 512 REMARK 465 LEU B 513 REMARK 465 HIS B 514 REMARK 465 ALA B 563 REMARK 465 LEU B 564 REMARK 465 VAL B 565 REMARK 465 ARG B 566 REMARK 465 ARG B 567 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 567 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 65 O HOH B 238 1.97 REMARK 500 O HOH A 267 O HOH A 268 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 622 106.88 -50.81 REMARK 500 ASP B 444 -16.76 75.36 REMARK 500 HIS B 531 143.82 -170.18 REMARK 500 ALA B 582 -164.72 -109.58 REMARK 500 HIS B 612 -71.13 -119.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 1 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 144 O REMARK 620 2 HOH A 148 O 91.9 REMARK 620 3 HOH A 240 O 126.9 93.8 REMARK 620 4 ASP A 483 OD1 69.9 103.8 155.7 REMARK 620 5 ASP A 483 OD2 114.5 108.3 113.4 45.1 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 672 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 5 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3K9K RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 AUTHORS STATE THAT THE DNA USED FOR THE STUDIES ENCODES A GLU FOR REMARK 999 POSITION 438, WHICH MIGHT BE A NATURAL VARIANT. DBREF 3K9J A 433 671 UNP Q53H47 SETMR_HUMAN 433 671 DBREF 3K9J B 433 671 UNP Q53H47 SETMR_HUMAN 433 671 SEQADV 3K9J GLU A 438 UNP Q53H47 GLY 438 SEE REMARK 999 SEQADV 3K9J ARG A 566 UNP Q53H47 ASN 566 ENGINEERED MUTATION SEQADV 3K9J ARG A 569 UNP Q53H47 GLY 569 ENGINEERED MUTATION SEQADV 3K9J TRP A 649 UNP Q53H47 ALA 649 ENGINEERED MUTATION SEQADV 3K9J GLU B 438 UNP Q53H47 GLY 438 SEE REMARK 999 SEQADV 3K9J ARG B 566 UNP Q53H47 ASN 566 ENGINEERED MUTATION SEQADV 3K9J ARG B 569 UNP Q53H47 GLY 569 ENGINEERED MUTATION SEQADV 3K9J TRP B 649 UNP Q53H47 ALA 649 ENGINEERED MUTATION SEQRES 1 A 239 HIS LEU LYS GLN ILE GLU LYS VAL LYS LYS LEU ASP LYS SEQRES 2 A 239 TRP VAL PRO HIS GLU LEU THR GLU ASN GLN LYS ASN ARG SEQRES 3 A 239 ARG PHE GLU VAL SER SER SER LEU ILE LEU ARG ASN HIS SEQRES 4 A 239 ASN GLU PRO PHE LEU ASP ARG ILE VAL THR CYS ASP GLU SEQRES 5 A 239 LYS TRP ILE LEU TYR ASP ASN ARG ARG ARG SER ALA GLN SEQRES 6 A 239 TRP LEU ASP GLN GLU GLU ALA PRO LYS HIS PHE PRO LYS SEQRES 7 A 239 PRO ILE LEU HIS PRO LYS LYS VAL MET VAL THR ILE TRP SEQRES 8 A 239 TRP SER ALA ALA GLY LEU ILE HIS TYR SER PHE LEU ASN SEQRES 9 A 239 PRO GLY GLU THR ILE THR SER GLU LYS TYR ALA GLN GLU SEQRES 10 A 239 ILE ASP GLU MET ASN GLN LYS LEU GLN ARG LEU GLN LEU SEQRES 11 A 239 ALA LEU VAL ARG ARG LYS ARG PRO ILE LEU LEU HIS ASP SEQRES 12 A 239 ASN ALA ARG PRO HIS VAL ALA GLN PRO THR LEU GLN LYS SEQRES 13 A 239 LEU ASN GLU LEU GLY TYR GLU VAL LEU PRO HIS PRO PRO SEQRES 14 A 239 TYR SER PRO ASP LEU LEU PRO THR ASN TYR HIS VAL PHE SEQRES 15 A 239 LYS HIS LEU ASN ASN PHE LEU GLN GLY LYS ARG PHE HIS SEQRES 16 A 239 ASN GLN GLN ASP ALA GLU ASN ALA PHE GLN GLU PHE VAL SEQRES 17 A 239 GLU SER GLN SER THR ASP PHE TYR TRP THR GLY ILE ASN SEQRES 18 A 239 GLN LEU ILE SER ARG TRP GLN LYS CYS VAL ASP CYS ASN SEQRES 19 A 239 GLY SER TYR PHE ASP SEQRES 1 B 239 HIS LEU LYS GLN ILE GLU LYS VAL LYS LYS LEU ASP LYS SEQRES 2 B 239 TRP VAL PRO HIS GLU LEU THR GLU ASN GLN LYS ASN ARG SEQRES 3 B 239 ARG PHE GLU VAL SER SER SER LEU ILE LEU ARG ASN HIS SEQRES 4 B 239 ASN GLU PRO PHE LEU ASP ARG ILE VAL THR CYS ASP GLU SEQRES 5 B 239 LYS TRP ILE LEU TYR ASP ASN ARG ARG ARG SER ALA GLN SEQRES 6 B 239 TRP LEU ASP GLN GLU GLU ALA PRO LYS HIS PHE PRO LYS SEQRES 7 B 239 PRO ILE LEU HIS PRO LYS LYS VAL MET VAL THR ILE TRP SEQRES 8 B 239 TRP SER ALA ALA GLY LEU ILE HIS TYR SER PHE LEU ASN SEQRES 9 B 239 PRO GLY GLU THR ILE THR SER GLU LYS TYR ALA GLN GLU SEQRES 10 B 239 ILE ASP GLU MET ASN GLN LYS LEU GLN ARG LEU GLN LEU SEQRES 11 B 239 ALA LEU VAL ARG ARG LYS ARG PRO ILE LEU LEU HIS ASP SEQRES 12 B 239 ASN ALA ARG PRO HIS VAL ALA GLN PRO THR LEU GLN LYS SEQRES 13 B 239 LEU ASN GLU LEU GLY TYR GLU VAL LEU PRO HIS PRO PRO SEQRES 14 B 239 TYR SER PRO ASP LEU LEU PRO THR ASN TYR HIS VAL PHE SEQRES 15 B 239 LYS HIS LEU ASN ASN PHE LEU GLN GLY LYS ARG PHE HIS SEQRES 16 B 239 ASN GLN GLN ASP ALA GLU ASN ALA PHE GLN GLU PHE VAL SEQRES 17 B 239 GLU SER GLN SER THR ASP PHE TYR TRP THR GLY ILE ASN SEQRES 18 B 239 GLN LEU ILE SER ARG TRP GLN LYS CYS VAL ASP CYS ASN SEQRES 19 B 239 GLY SER TYR PHE ASP HET CA A 1 1 HET EDO A 672 4 HET EDO A 2 4 HET EDO A 3 4 HET EDO A 5 4 HET EDO B 4 4 HETNAM CA CALCIUM ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 CA CA 2+ FORMUL 4 EDO 5(C2 H6 O2) FORMUL 9 HOH *251(H2 O) HELIX 1 1 THR A 452 GLU A 473 1 22 HELIX 2 2 PHE A 475 ASP A 477 5 3 HELIX 3 3 THR A 542 GLN A 561 1 20 HELIX 4 4 LEU A 562 LEU A 564 5 3 HELIX 5 5 ALA A 577 VAL A 581 5 5 HELIX 6 6 ALA A 582 GLY A 593 1 12 HELIX 7 7 SER A 603 LEU A 606 5 4 HELIX 8 8 LEU A 607 HIS A 612 1 6 HELIX 9 9 HIS A 612 GLN A 622 1 11 HELIX 10 10 ASN A 628 GLN A 643 1 16 HELIX 11 11 ASP A 646 GLN A 654 1 9 HELIX 12 12 GLN A 654 CYS A 665 1 12 HELIX 13 13 THR B 452 GLU B 473 1 22 HELIX 14 14 PHE B 475 ASP B 477 5 3 HELIX 15 15 THR B 542 GLN B 561 1 20 HELIX 16 16 ALA B 582 LEU B 592 1 11 HELIX 17 17 SER B 603 LEU B 606 5 4 HELIX 18 18 LEU B 607 HIS B 612 1 6 HELIX 19 19 HIS B 612 GLN B 622 1 11 HELIX 20 20 ASN B 628 GLN B 643 1 16 HELIX 21 21 SER B 644 GLN B 654 1 11 HELIX 22 22 GLN B 654 CYS B 665 1 12 SHEET 1 A 5 GLY A 528 PHE A 534 0 SHEET 2 A 5 LYS A 517 SER A 525 -1 N TRP A 523 O HIS A 531 SHEET 3 A 5 ILE A 479 LEU A 488 -1 N THR A 481 O TRP A 524 SHEET 4 A 5 ILE A 571 LEU A 573 1 O ILE A 571 N VAL A 480 SHEET 5 A 5 GLU A 595 VAL A 596 1 O GLU A 595 N LEU A 572 SHEET 1 B 2 LYS B 441 LYS B 442 0 SHEET 2 B 2 LYS B 445 TRP B 446 -1 O LYS B 445 N LYS B 442 SHEET 1 C 5 GLY B 528 PHE B 534 0 SHEET 2 C 5 LYS B 517 SER B 525 -1 N SER B 525 O GLY B 528 SHEET 3 C 5 ILE B 479 LEU B 488 -1 N THR B 481 O TRP B 524 SHEET 4 C 5 ILE B 571 LEU B 573 1 O ILE B 571 N VAL B 480 SHEET 5 C 5 GLU B 595 VAL B 596 1 O GLU B 595 N LEU B 572 LINK CA CA A 1 O HOH A 144 1555 1555 2.71 LINK CA CA A 1 O HOH A 148 1555 1555 2.58 LINK CA CA A 1 O HOH A 240 1555 1555 2.85 LINK CA CA A 1 OD1 ASP A 483 1555 1555 2.75 LINK CA CA A 1 OD2 ASP A 483 1555 1555 2.95 SITE 1 AC1 4 HOH A 144 HOH A 148 HOH A 240 ASP A 483 SITE 1 AC2 4 ILE A 530 HIS A 531 TYR A 532 LYS A 556 SITE 1 AC3 9 EDO A 3 HOH A 128 HOH A 160 HOH A 250 SITE 2 AC3 9 HOH A 267 ASP A 575 ASN A 576 PRO A 601 SITE 3 AC3 9 TYR A 602 SITE 1 AC4 4 EDO A 2 HOH A 236 HOH A 252 TYR A 602 SITE 1 AC5 2 THR A 542 SER A 543 SITE 1 AC6 2 HOH B 264 GLN B 643 CRYST1 79.158 45.411 90.678 90.00 113.81 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012633 0.000000 0.005574 0.00000 SCALE2 0.000000 0.022021 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012054 0.00000