HEADER TRANSCRIPTION 20-OCT-09 3KBA TITLE PROGESTERONE RECEPTOR BOUND TO SULFONAMIDE PYRROLIDINE PARTIAL AGONIST COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROGESTERONE RECEPTOR; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: STEROID-BINDING REGION: UNP RESIDUES 681-933; COMPND 5 SYNONYM: PR, NUCLEAR RECEPTOR SUBFAMILY 3 GROUP C MEMBER 3; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PGR, NR3C3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NUCLEAR RECEPTOR, TRANSCRIPTION, TRANSCRIPTION REGULATION EXPDTA X-RAY DIFFRACTION AUTHOR L.S.KALLANDER,D.G.WASHBURN,S.P.WILLIAMS,K.P.MADAUSS REVDAT 5 21-FEB-24 3KBA 1 REMARK REVDAT 4 01-NOV-17 3KBA 1 REMARK REVDAT 3 13-JUL-11 3KBA 1 VERSN REVDAT 2 23-MAR-11 3KBA 1 JRNL REVDAT 1 08-DEC-09 3KBA 0 JRNL AUTH L.S.KALLANDER,D.G.WASHBURN,T.H.HOANG,J.S.FRAZEE,P.STOY, JRNL AUTH 2 L.JOHNSON,Q.LU,M.HAMMOND,L.S.BARTON,J.R.PATTERSON, JRNL AUTH 3 L.M.AZZARANO,R.NAGILLA,K.P.MADAUSS,S.P.WILLIAMS,E.L.STEWART, JRNL AUTH 4 C.DURAISWAMI,E.T.GRYGIELKO,X.XU,N.J.LAPING,J.D.BRAY, JRNL AUTH 5 S.K.THOMPSON JRNL TITL IMPROVING THE DEVELOPABILITY PROFILE OF PYRROLIDINE JRNL TITL 2 PROGESTERONE RECEPTOR PARTIAL AGONISTS. JRNL REF BIOORG.MED.CHEM.LETT. V. 20 371 2010 JRNL REFN ISSN 0960-894X JRNL PMID 19926282 JRNL DOI 10.1016/J.BMCL.2009.10.092 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 34246 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1752 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2291 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.82 REMARK 3 BIN R VALUE (WORKING SET) : 0.2900 REMARK 3 BIN FREE R VALUE SET COUNT : 124 REMARK 3 BIN FREE R VALUE : 0.3880 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3942 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 59 REMARK 3 SOLVENT ATOMS : 425 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.94000 REMARK 3 B22 (A**2) : -1.72000 REMARK 3 B33 (A**2) : -1.71000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 2.26000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.222 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.190 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.189 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.851 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.919 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4188 ; 0.006 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2847 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5685 ; 0.875 ; 1.998 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6997 ; 0.795 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 512 ; 4.599 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 163 ;33.238 ;24.172 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 775 ;12.559 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;11.525 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 649 ; 0.046 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4509 ; 0.002 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 819 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 971 ; 0.181 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2927 ; 0.160 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2090 ; 0.171 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1913 ; 0.084 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 269 ; 0.104 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 23 ; 0.181 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 55 ; 0.242 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 29 ; 0.154 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2667 ; 0.274 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1006 ; 0.040 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4111 ; 0.446 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1820 ; 0.648 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1573 ; 1.022 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 999 REMARK 3 ORIGIN FOR THE GROUP (A): 4.0416 -10.1664 33.7068 REMARK 3 T TENSOR REMARK 3 T11: -0.0852 T22: -0.1831 REMARK 3 T33: -0.1722 T12: -0.0065 REMARK 3 T13: 0.0613 T23: -0.0159 REMARK 3 L TENSOR REMARK 3 L11: 1.4172 L22: 2.1712 REMARK 3 L33: 1.5162 L12: 0.2866 REMARK 3 L13: 0.1287 L23: -0.0525 REMARK 3 S TENSOR REMARK 3 S11: -0.0545 S12: 0.1189 S13: -0.1114 REMARK 3 S21: -0.1673 S22: 0.0784 S23: -0.0921 REMARK 3 S31: 0.1063 S32: 0.1167 S33: -0.0240 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 999 REMARK 3 ORIGIN FOR THE GROUP (A): 17.2490 9.8857 1.8840 REMARK 3 T TENSOR REMARK 3 T11: -0.1468 T22: -0.1294 REMARK 3 T33: -0.1811 T12: 0.0007 REMARK 3 T13: 0.0052 T23: 0.0084 REMARK 3 L TENSOR REMARK 3 L11: 0.9957 L22: 1.8468 REMARK 3 L33: 1.5655 L12: 0.1795 REMARK 3 L13: -0.5284 L23: 0.3917 REMARK 3 S TENSOR REMARK 3 S11: 0.0500 S12: -0.0281 S13: 0.0757 REMARK 3 S21: 0.0315 S22: -0.0235 S23: 0.0287 REMARK 3 S31: -0.0074 S32: 0.0991 S33: -0.0265 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3KBA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-OCT-09. REMARK 100 THE DEPOSITION ID IS D_1000055777. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : SI(111) DOUBLE-CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39206 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.06400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.80 REMARK 200 R MERGE FOR SHELL (I) : 0.38700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 1.3.3 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350, 2MM LI2SO4, HEPES PH REMARK 280 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 32.17450 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ILE A 681 REMARK 465 ASP A 704 REMARK 465 ASN A 705 REMARK 465 THR A 706 REMARK 465 LYS A 707 REMARK 465 PRO A 708 REMARK 465 SER A 792 REMARK 465 SER A 793 REMARK 465 GLN A 860 REMARK 465 ILE B 681 REMARK 465 LYS B 932 REMARK 465 LYS B 933 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 682 CG CD OE1 NE2 REMARK 470 LEU A 683 CG CD1 CD2 REMARK 470 ILE A 684 CG1 CG2 CD1 REMARK 470 ASN A 689 ND2 REMARK 470 ASP A 697 CG OD1 OD2 REMARK 470 ASP A 709 CG OD1 OD2 REMARK 470 GLU A 786 OE1 REMARK 470 GLN A 787 CD OE1 NE2 REMARK 470 GLU A 791 CG CD OE1 OE2 REMARK 470 GLN A 803 CD OE1 NE2 REMARK 470 ARG A 836 NE CZ NH1 NH2 REMARK 470 LYS A 861 CG CD CE NZ REMARK 470 ARG A 899 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 932 CG CD CE NZ REMARK 470 LYS A 933 CA C O CB CG CD CE REMARK 470 LYS A 933 NZ REMARK 470 GLN B 682 CG CD OE1 NE2 REMARK 470 LEU B 683 CG CD1 CD2 REMARK 470 GLN B 720 OE1 NE2 REMARK 470 GLN B 812 NE2 REMARK 470 GLN B 868 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER A 796 O HOH A 91 1.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLN B 812 CD GLN B 812 OE1 0.278 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 782 84.29 -151.63 REMARK 500 SER A 837 57.00 -97.06 REMARK 500 MET A 924 31.79 -95.53 REMARK 500 LYS A 932 -94.84 -80.16 REMARK 500 SER B 837 55.61 -100.83 REMARK 500 ARG B 859 -53.26 -124.36 REMARK 500 MET B 924 40.46 -93.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE WOW A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE WOW B 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 934 DBREF 3KBA A 681 933 UNP P06401 PRGR_HUMAN 681 933 DBREF 3KBA B 681 933 UNP P06401 PRGR_HUMAN 681 933 SEQRES 1 A 253 ILE GLN LEU ILE PRO PRO LEU ILE ASN LEU LEU MET SER SEQRES 2 A 253 ILE GLU PRO ASP VAL ILE TYR ALA GLY HIS ASP ASN THR SEQRES 3 A 253 LYS PRO ASP THR SER SER SER LEU LEU THR SER LEU ASN SEQRES 4 A 253 GLN LEU GLY GLU ARG GLN LEU LEU SER VAL VAL LYS TRP SEQRES 5 A 253 SER LYS SER LEU PRO GLY PHE ARG ASN LEU HIS ILE ASP SEQRES 6 A 253 ASP GLN ILE THR LEU ILE GLN TYR SER TRP MET SER LEU SEQRES 7 A 253 MET VAL PHE GLY LEU GLY TRP ARG SER TYR LYS HIS VAL SEQRES 8 A 253 SER GLY GLN MET LEU TYR PHE ALA PRO ASP LEU ILE LEU SEQRES 9 A 253 ASN GLU GLN ARG MET LYS GLU SER SER PHE TYR SER LEU SEQRES 10 A 253 CYS LEU THR MET TRP GLN ILE PRO GLN GLU PHE VAL LYS SEQRES 11 A 253 LEU GLN VAL SER GLN GLU GLU PHE LEU CYS MET LYS VAL SEQRES 12 A 253 LEU LEU LEU LEU ASN THR ILE PRO LEU GLU GLY LEU ARG SEQRES 13 A 253 SER GLN THR GLN PHE GLU GLU MET ARG SER SER TYR ILE SEQRES 14 A 253 ARG GLU LEU ILE LYS ALA ILE GLY LEU ARG GLN LYS GLY SEQRES 15 A 253 VAL VAL SER SER SER GLN ARG PHE TYR GLN LEU THR LYS SEQRES 16 A 253 LEU LEU ASP ASN LEU HIS ASP LEU VAL LYS GLN LEU HIS SEQRES 17 A 253 LEU TYR CYS LEU ASN THR PHE ILE GLN SER ARG ALA LEU SEQRES 18 A 253 SER VAL GLU PHE PRO GLU MET MET SER GLU VAL ILE ALA SEQRES 19 A 253 ALA GLN LEU PRO LYS ILE LEU ALA GLY MET VAL LYS PRO SEQRES 20 A 253 LEU LEU PHE HIS LYS LYS SEQRES 1 B 253 ILE GLN LEU ILE PRO PRO LEU ILE ASN LEU LEU MET SER SEQRES 2 B 253 ILE GLU PRO ASP VAL ILE TYR ALA GLY HIS ASP ASN THR SEQRES 3 B 253 LYS PRO ASP THR SER SER SER LEU LEU THR SER LEU ASN SEQRES 4 B 253 GLN LEU GLY GLU ARG GLN LEU LEU SER VAL VAL LYS TRP SEQRES 5 B 253 SER LYS SER LEU PRO GLY PHE ARG ASN LEU HIS ILE ASP SEQRES 6 B 253 ASP GLN ILE THR LEU ILE GLN TYR SER TRP MET SER LEU SEQRES 7 B 253 MET VAL PHE GLY LEU GLY TRP ARG SER TYR LYS HIS VAL SEQRES 8 B 253 SER GLY GLN MET LEU TYR PHE ALA PRO ASP LEU ILE LEU SEQRES 9 B 253 ASN GLU GLN ARG MET LYS GLU SER SER PHE TYR SER LEU SEQRES 10 B 253 CYS LEU THR MET TRP GLN ILE PRO GLN GLU PHE VAL LYS SEQRES 11 B 253 LEU GLN VAL SER GLN GLU GLU PHE LEU CYS MET LYS VAL SEQRES 12 B 253 LEU LEU LEU LEU ASN THR ILE PRO LEU GLU GLY LEU ARG SEQRES 13 B 253 SER GLN THR GLN PHE GLU GLU MET ARG SER SER TYR ILE SEQRES 14 B 253 ARG GLU LEU ILE LYS ALA ILE GLY LEU ARG GLN LYS GLY SEQRES 15 B 253 VAL VAL SER SER SER GLN ARG PHE TYR GLN LEU THR LYS SEQRES 16 B 253 LEU LEU ASP ASN LEU HIS ASP LEU VAL LYS GLN LEU HIS SEQRES 17 B 253 LEU TYR CYS LEU ASN THR PHE ILE GLN SER ARG ALA LEU SEQRES 18 B 253 SER VAL GLU PHE PRO GLU MET MET SER GLU VAL ILE ALA SEQRES 19 B 253 ALA GLN LEU PRO LYS ILE LEU ALA GLY MET VAL LYS PRO SEQRES 20 B 253 LEU LEU PHE HIS LYS LYS HET WOW A 1 27 HET SO4 A 934 5 HET WOW B 2 27 HETNAM WOW 2-CHLORO-4-{(2-METHYLBENZYL)[(3S)-1-(METHYLSULFONYL) HETNAM 2 WOW PYRROLIDIN-3-YL]AMINO}BENZONITRILE HETNAM SO4 SULFATE ION FORMUL 3 WOW 2(C20 H22 CL N3 O2 S) FORMUL 4 SO4 O4 S 2- FORMUL 6 HOH *425(H2 O) HELIX 1 1 PRO A 685 GLU A 695 1 11 HELIX 2 2 THR A 710 LEU A 736 1 27 HELIX 3 3 GLY A 738 LEU A 742 5 5 HELIX 4 4 HIS A 743 SER A 754 1 12 HELIX 5 5 SER A 754 SER A 772 1 19 HELIX 6 6 ASN A 785 MET A 789 5 5 HELIX 7 7 PHE A 794 TRP A 802 1 9 HELIX 8 8 TRP A 802 GLN A 812 1 11 HELIX 9 9 SER A 814 LEU A 827 1 14 HELIX 10 10 SER A 837 LEU A 858 1 22 HELIX 11 11 GLY A 862 GLN A 897 1 36 HELIX 12 12 GLN A 897 SER A 902 1 6 HELIX 13 13 PRO A 906 ALA A 922 1 17 HELIX 14 14 PRO B 685 ILE B 694 1 10 HELIX 15 15 THR B 710 LEU B 736 1 27 HELIX 16 16 GLY B 738 LEU B 742 5 5 HELIX 17 17 HIS B 743 VAL B 771 1 29 HELIX 18 18 ASN B 785 GLU B 791 1 7 HELIX 19 19 PHE B 794 GLN B 812 1 19 HELIX 20 20 SER B 814 LEU B 827 1 14 HELIX 21 21 SER B 837 LEU B 858 1 22 HELIX 22 22 GLY B 862 GLN B 897 1 36 HELIX 23 23 GLN B 897 SER B 902 1 6 HELIX 24 24 PRO B 906 ALA B 922 1 17 SHEET 1 A 2 LEU A 776 ALA A 779 0 SHEET 2 A 2 LEU A 782 LEU A 784 -1 O LEU A 784 N LEU A 776 SHEET 1 B 2 THR A 829 PRO A 831 0 SHEET 2 B 2 VAL A 925 PRO A 927 -1 O LYS A 926 N ILE A 830 SHEET 1 C 2 LEU B 776 ALA B 779 0 SHEET 2 C 2 LEU B 782 LEU B 784 -1 O LEU B 784 N LEU B 776 SHEET 1 D 2 THR B 829 ILE B 830 0 SHEET 2 D 2 LYS B 926 PRO B 927 -1 O LYS B 926 N ILE B 830 SITE 1 AC1 13 LEU A 715 LEU A 718 ASN A 719 MET A 759 SITE 2 AC1 13 VAL A 760 ARG A 766 PHE A 794 MET A 801 SITE 3 AC1 13 LEU A 887 TYR A 890 CYS A 891 THR A 894 SITE 4 AC1 13 PHE A 905 SITE 1 AC2 14 LEU B 718 ASN B 719 LEU B 721 GLY B 722 SITE 2 AC2 14 ARG B 766 PHE B 778 PHE B 794 LEU B 797 SITE 3 AC2 14 MET B 801 LEU B 887 TYR B 890 CYS B 891 SITE 4 AC2 14 THR B 894 PHE B 905 SITE 1 AC3 9 HOH A 333 PRO A 737 GLY A 738 ARG A 740 SITE 2 AC3 9 ASN A 741 PRO B 737 GLY B 738 ARG B 740 SITE 3 AC3 9 ASN B 741 CRYST1 57.394 64.349 70.420 90.00 96.53 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017423 0.000000 0.001993 0.00000 SCALE2 0.000000 0.015540 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014293 0.00000