HEADER TRANSFERASE/DNA 07-NOV-09 3KLG TITLE CRYSTAL STRUCTURE OF AZT-RESISTANT HIV-1 REVERSE TRANSCRIPTASE TITLE 2 CROSSLINKED TO PRE-TRANSLOCATION AZTMP-TERMINATED DNA (COMPLEX N) COMPND MOL_ID: 1; COMPND 2 MOLECULE: REVERSE TRANSCRIPTASE/RIBONUCLEASE H; COMPND 3 CHAIN: A, E; COMPND 4 SYNONYM: P66 RT; COMPND 5 EC: 2.7.7.49, 2.7.7.7, 3.1.26.4; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: P51 RT; COMPND 10 CHAIN: B, F; COMPND 11 ENGINEERED: YES; COMPND 12 MUTATION: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: DNA (5'- COMPND 15 D(*AP*T*GP*CP*AP*TP*GP*GP*CP*GP*CP*CP*CP*GP*AP*AP*CP*AP*GP*GP*GP*AP*C COMPND 16 P*TP*GP*TP*G)-3'); COMPND 17 CHAIN: C, G; COMPND 18 ENGINEERED: YES; COMPND 19 OTHER_DETAILS: DNA TEMPLATE; COMPND 20 MOL_ID: 4; COMPND 21 MOLECULE: DNA (5'- COMPND 22 D(*A*CP*AP*GP*TP*CP*CP*CP*TP*GP*TP*TP*CP*GP*GP*(MRG) COMPND 23 P*CP*GP*CP*CP*AP*(ATM))-3'); COMPND 24 CHAIN: D, H; COMPND 25 ENGINEERED: YES; COMPND 26 OTHER_DETAILS: DNA PRIMER SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS TYPE 1; SOURCE 3 ORGANISM_COMMON: HIV-1; SOURCE 4 ORGANISM_TAXID: 11678; SOURCE 5 STRAIN: BH10; SOURCE 6 GENE: GAG-POL; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS TYPE 1; SOURCE 13 ORGANISM_COMMON: HIV-1; SOURCE 14 ORGANISM_TAXID: 11678; SOURCE 15 STRAIN: BH10; SOURCE 16 GENE: GAG-POL; SOURCE 17 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 18 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 19 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 20 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 21 MOL_ID: 3; SOURCE 22 SYNTHETIC: YES; SOURCE 23 OTHER_DETAILS: DNA TEMPLATE FOR REVERSE TRANSCRIPTASE; SOURCE 24 MOL_ID: 4; SOURCE 25 SYNTHETIC: YES; SOURCE 26 OTHER_DETAILS: DNA PRIMER FOR REVERSE TRANSCRIPTASE KEYWDS HIV-1, REVERSE TRANSCRIPTASE, RT, AZT, AZT EXCISION, AZT RESISTANCE, KEYWDS 2 RESISTANCE MECHANISM, AZT RESISTANCE MUTATIONS, P51/P66, NUCLEOSIDE KEYWDS 3 INHIBITOR, AIDS, HIV, DNA POLYMERASE, NRTI, NUCLEOTIDE EXCISION, KEYWDS 4 DNA-DIRECTED DNA POLYMERASE, MAGNESIUM, METAL-BINDING, KEYWDS 5 MULTIFUNCTIONAL ENZYME, MYRISTATE NUCLEASE, RNA-DIRECTED DNA KEYWDS 6 POLYMERASE, TRANSFERASE, TRANSFERASE-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR X.TU,S.G.SARAFIANOS,E.ARNOLD REVDAT 4 06-SEP-23 3KLG 1 REMARK REVDAT 3 13-OCT-21 3KLG 1 SEQADV LINK REVDAT 2 12-JAN-11 3KLG 1 JRNL REVDAT 1 22-SEP-10 3KLG 0 JRNL AUTH X.TU,K.DAS,Q.HAN,J.D.BAUMAN,A.D.CLARK,X.HOU,Y.V.FRENKEL, JRNL AUTH 2 B.L.GAFFNEY,R.A.JONES,P.L.BOYER,S.H.HUGHES,S.G.SARAFIANOS, JRNL AUTH 3 E.ARNOLD JRNL TITL STRUCTURAL BASIS OF HIV-1 RESISTANCE TO AZT BY EXCISION. JRNL REF NAT.STRUCT.MOL.BIOL. V. 17 1202 2010 JRNL REFN ISSN 1545-9993 JRNL PMID 20852643 JRNL DOI 10.1038/NSMB.1908 REMARK 2 REMARK 2 RESOLUTION. 3.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.2 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.97 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 5952046.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 85.0 REMARK 3 NUMBER OF REFLECTIONS : 31625 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.312 REMARK 3 FREE R VALUE : 0.350 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.000 REMARK 3 FREE R VALUE TEST SET COUNT : 641 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.014 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.65 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.93 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 57.40 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3427 REMARK 3 BIN R VALUE (WORKING SET) : 0.3690 REMARK 3 BIN FREE R VALUE : 0.3890 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 2.30 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 80 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.041 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 15836 REMARK 3 NUCLEIC ACID ATOMS : 1804 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 120.5 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.65 REMARK 3 ESD FROM SIGMAA (A) : 1.01 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.71 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.58 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.10 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.240 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : GROUP REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.25 REMARK 3 BSOL : 38.58 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : DNA-RNA_REP-CCP4.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED REMARK 4 REMARK 4 3KLG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-NOV-09. REMARK 100 THE DEPOSITION ID IS D_1000056139. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 6.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : F1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32271 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.650 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 83.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.13700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.75 REMARK 200 COMPLETENESS FOR SHELL (%) : 49.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.78600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1RTD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM BIS-TRIS PROPANE PH 5.6, 10% REMARK 280 PEG8000, 0.3 M (NH4)2SO4, 5% GLYCEROL, 5% SUCROSE, 20 MM MGCL2, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277.0K, PH 6.4 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 39.56000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 138.96000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 77.20000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 138.96000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 39.56000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 77.20000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 14240 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 50430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -47.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13960 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 51230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -45.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -1 REMARK 465 VAL A 0 REMARK 465 GLY A 555 REMARK 465 ILE A 556 REMARK 465 ARG A 557 REMARK 465 LYS A 558 REMARK 465 VAL A 559 REMARK 465 LEU A 560 REMARK 465 PRO B 1 REMARK 465 ILE B 2 REMARK 465 ASP B 218 REMARK 465 LYS B 219 REMARK 465 LYS B 220 REMARK 465 HIS B 221 REMARK 465 GLN B 222 REMARK 465 LYS B 223 REMARK 465 GLU B 224 REMARK 465 PRO B 225 REMARK 465 PRO B 226 REMARK 465 PHE B 227 REMARK 465 LEU B 228 REMARK 465 TRP B 229 REMARK 465 MET B 230 REMARK 465 GLY B 429 REMARK 465 GLY B 430 REMARK 465 HIS B 431 REMARK 465 HIS B 432 REMARK 465 HIS B 433 REMARK 465 HIS B 434 REMARK 465 HIS B 435 REMARK 465 HIS B 436 REMARK 465 HIS B 437 REMARK 465 DA C 701 REMARK 465 DT C 702 REMARK 465 DT C 726 REMARK 465 DG C 727 REMARK 465 DA D 802 REMARK 465 MET E -1 REMARK 465 VAL E 0 REMARK 465 GLY E 555 REMARK 465 ILE E 556 REMARK 465 ARG E 557 REMARK 465 LYS E 558 REMARK 465 VAL E 559 REMARK 465 LEU E 560 REMARK 465 PRO F 1 REMARK 465 ILE F 2 REMARK 465 ASP F 218 REMARK 465 LYS F 219 REMARK 465 LYS F 220 REMARK 465 HIS F 221 REMARK 465 GLN F 222 REMARK 465 LYS F 223 REMARK 465 GLU F 224 REMARK 465 PRO F 225 REMARK 465 PRO F 226 REMARK 465 PHE F 227 REMARK 465 LEU F 228 REMARK 465 TRP F 229 REMARK 465 MET F 230 REMARK 465 GLY F 429 REMARK 465 GLY F 430 REMARK 465 HIS F 431 REMARK 465 HIS F 432 REMARK 465 HIS F 433 REMARK 465 HIS F 434 REMARK 465 HIS F 435 REMARK 465 HIS F 436 REMARK 465 HIS F 437 REMARK 465 DA G 701 REMARK 465 DT G 702 REMARK 465 DT G 726 REMARK 465 DG G 727 REMARK 465 DA H 802 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 DG C 703 P OP1 OP2 REMARK 470 DC D 803 P OP1 OP2 REMARK 470 DG G 703 P OP1 OP2 REMARK 470 DC H 803 P OP1 OP2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO E 345 C - N - CD ANGL. DEV. = -15.8 DEGREES REMARK 500 PRO F 4 C - N - CD ANGL. DEV. = -14.0 DEGREES REMARK 500 DC G 723 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DA H 822 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 3 19.52 93.50 REMARK 500 ASP A 17 -140.08 -99.81 REMARK 500 PRO A 59 149.49 -38.62 REMARK 500 PHE A 61 -144.44 -142.45 REMARK 500 LYS A 65 -168.49 -73.05 REMARK 500 SER A 68 -17.23 108.08 REMARK 500 THR A 69 -72.11 -80.84 REMARK 500 GLN A 85 142.11 -35.49 REMARK 500 PHE A 116 40.46 -91.81 REMARK 500 GLU A 122 -70.85 -48.32 REMARK 500 SER A 134 -98.97 -66.60 REMARK 500 ILE A 135 -41.10 -142.73 REMARK 500 PRO A 150 -164.77 -61.41 REMARK 500 MET A 184 -127.40 54.97 REMARK 500 ASP A 192 32.12 -83.29 REMARK 500 LEU A 193 -151.25 -85.69 REMARK 500 ASP A 218 41.49 -67.08 REMARK 500 TYR A 232 -157.30 -149.93 REMARK 500 PRO A 243 95.84 -45.03 REMARK 500 GLN A 269 -72.19 -55.80 REMARK 500 VAL A 276 33.10 -145.58 REMARK 500 LYS A 281 -6.49 -56.71 REMARK 500 THR A 286 78.79 -64.58 REMARK 500 GLN A 343 -29.86 -142.27 REMARK 500 LYS A 350 119.44 -163.00 REMARK 500 THR A 362 -141.76 -85.49 REMARK 500 THR A 377 21.75 -62.53 REMARK 500 TRP A 401 -73.40 -67.71 REMARK 500 PRO A 412 -158.96 -55.88 REMARK 500 GLU A 415 -169.29 -117.43 REMARK 500 TRP A 426 -75.49 -60.54 REMARK 500 THR A 459 -161.06 -128.22 REMARK 500 THR A 470 -84.52 -61.37 REMARK 500 ASP A 488 35.81 -96.92 REMARK 500 GLU A 516 -57.48 68.25 REMARK 500 ALA A 538 -71.74 -73.27 REMARK 500 VAL A 552 69.07 -104.50 REMARK 500 ILE B 5 -122.98 59.16 REMARK 500 LYS B 20 27.39 -159.71 REMARK 500 PRO B 25 147.44 -29.44 REMARK 500 VAL B 35 -73.52 -53.50 REMARK 500 THR B 58 142.98 -175.83 REMARK 500 LYS B 64 84.99 -156.15 REMARK 500 ASP B 67 -49.84 85.98 REMARK 500 PHE B 77 22.15 -71.50 REMARK 500 VAL B 90 -62.10 -99.60 REMARK 500 SER B 105 140.05 -175.39 REMARK 500 VAL B 111 45.34 -92.66 REMARK 500 ASP B 113 -9.25 -58.52 REMARK 500 PHE B 116 21.19 -74.29 REMARK 500 REMARK 500 THIS ENTRY HAS 157 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3KLE RELATED DB: PDB REMARK 900 RELATED ID: 3KLF RELATED DB: PDB REMARK 900 RELATED ID: 3KLH RELATED DB: PDB REMARK 900 RELATED ID: 3KLI RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 ACOORDING TO THE AUTHORS, SOME POPULATION REMARK 999 NATURALLY HAVE ILE IN THIS POSITION DBREF 3KLG A 1 560 UNP P03366 POL_HV1B1 600 1159 DBREF 3KLG B 1 428 UNP P03366 POL_HV1B1 600 1027 DBREF 3KLG E 1 560 UNP P03366 POL_HV1B1 600 1159 DBREF 3KLG F 1 428 UNP P03366 POL_HV1B1 600 1027 DBREF 3KLG C 701 727 PDB 3KLG 3KLG 701 727 DBREF 3KLG G 701 727 PDB 3KLG 3KLG 701 727 DBREF 3KLG D 802 823 PDB 3KLG 3KLG 802 823 DBREF 3KLG H 802 823 PDB 3KLG 3KLG 802 823 SEQADV 3KLG MET A -1 UNP P03366 EXPRESSION TAG SEQADV 3KLG VAL A 0 UNP P03366 EXPRESSION TAG SEQADV 3KLG LEU A 41 UNP P03366 MET 640 ENGINEERED MUTATION SEQADV 3KLG ASN A 67 UNP P03366 ASP 666 ENGINEERED MUTATION SEQADV 3KLG ARG A 70 UNP P03366 LYS 669 ENGINEERED MUTATION SEQADV 3KLG TYR A 215 UNP P03366 THR 814 ENGINEERED MUTATION SEQADV 3KLG GLN A 219 UNP P03366 LYS 818 ENGINEERED MUTATION SEQADV 3KLG CYS A 258 UNP P03366 GLN 857 ENGINEERED MUTATION SEQADV 3KLG SER A 280 UNP P03366 CYS 879 ENGINEERED MUTATION SEQADV 3KLG VAL A 559 UNP P03366 ILE 1158 SEE REMARK 999 SEQADV 3KLG SER B 280 UNP P03366 CYS 879 ENGINEERED MUTATION SEQADV 3KLG GLY B 429 UNP P03366 EXPRESSION TAG SEQADV 3KLG GLY B 430 UNP P03366 EXPRESSION TAG SEQADV 3KLG HIS B 431 UNP P03366 EXPRESSION TAG SEQADV 3KLG HIS B 432 UNP P03366 EXPRESSION TAG SEQADV 3KLG HIS B 433 UNP P03366 EXPRESSION TAG SEQADV 3KLG HIS B 434 UNP P03366 EXPRESSION TAG SEQADV 3KLG HIS B 435 UNP P03366 EXPRESSION TAG SEQADV 3KLG HIS B 436 UNP P03366 EXPRESSION TAG SEQADV 3KLG HIS B 437 UNP P03366 EXPRESSION TAG SEQADV 3KLG MET E -1 UNP P03366 EXPRESSION TAG SEQADV 3KLG VAL E 0 UNP P03366 EXPRESSION TAG SEQADV 3KLG LEU E 41 UNP P03366 MET 640 ENGINEERED MUTATION SEQADV 3KLG ASN E 67 UNP P03366 ASP 666 ENGINEERED MUTATION SEQADV 3KLG ARG E 70 UNP P03366 LYS 669 ENGINEERED MUTATION SEQADV 3KLG TYR E 215 UNP P03366 THR 814 ENGINEERED MUTATION SEQADV 3KLG GLN E 219 UNP P03366 LYS 818 ENGINEERED MUTATION SEQADV 3KLG CYS E 258 UNP P03366 GLN 857 ENGINEERED MUTATION SEQADV 3KLG SER E 280 UNP P03366 CYS 879 ENGINEERED MUTATION SEQADV 3KLG VAL E 559 UNP P03366 ILE 1158 SEE REMARK 999 SEQADV 3KLG SER F 280 UNP P03366 CYS 879 ENGINEERED MUTATION SEQADV 3KLG GLY F 429 UNP P03366 EXPRESSION TAG SEQADV 3KLG GLY F 430 UNP P03366 EXPRESSION TAG SEQADV 3KLG HIS F 431 UNP P03366 EXPRESSION TAG SEQADV 3KLG HIS F 432 UNP P03366 EXPRESSION TAG SEQADV 3KLG HIS F 433 UNP P03366 EXPRESSION TAG SEQADV 3KLG HIS F 434 UNP P03366 EXPRESSION TAG SEQADV 3KLG HIS F 435 UNP P03366 EXPRESSION TAG SEQADV 3KLG HIS F 436 UNP P03366 EXPRESSION TAG SEQADV 3KLG HIS F 437 UNP P03366 EXPRESSION TAG SEQRES 1 A 562 MET VAL PRO ILE SER PRO ILE GLU THR VAL PRO VAL LYS SEQRES 2 A 562 LEU LYS PRO GLY MET ASP GLY PRO LYS VAL LYS GLN TRP SEQRES 3 A 562 PRO LEU THR GLU GLU LYS ILE LYS ALA LEU VAL GLU ILE SEQRES 4 A 562 CYS THR GLU LEU GLU LYS GLU GLY LYS ILE SER LYS ILE SEQRES 5 A 562 GLY PRO GLU ASN PRO TYR ASN THR PRO VAL PHE ALA ILE SEQRES 6 A 562 LYS LYS LYS ASN SER THR ARG TRP ARG LYS LEU VAL ASP SEQRES 7 A 562 PHE ARG GLU LEU ASN LYS ARG THR GLN ASP PHE TRP GLU SEQRES 8 A 562 VAL GLN LEU GLY ILE PRO HIS PRO ALA GLY LEU LYS LYS SEQRES 9 A 562 LYS LYS SER VAL THR VAL LEU ASP VAL GLY ASP ALA TYR SEQRES 10 A 562 PHE SER VAL PRO LEU ASP GLU ASP PHE ARG LYS TYR THR SEQRES 11 A 562 ALA PHE THR ILE PRO SER ILE ASN ASN GLU THR PRO GLY SEQRES 12 A 562 ILE ARG TYR GLN TYR ASN VAL LEU PRO GLN GLY TRP LYS SEQRES 13 A 562 GLY SER PRO ALA ILE PHE GLN SER SER MET THR LYS ILE SEQRES 14 A 562 LEU GLU PRO PHE LYS LYS GLN ASN PRO ASP ILE VAL ILE SEQRES 15 A 562 TYR GLN TYR MET ASP ASP LEU TYR VAL GLY SER ASP LEU SEQRES 16 A 562 GLU ILE GLY GLN HIS ARG THR LYS ILE GLU GLU LEU ARG SEQRES 17 A 562 GLN HIS LEU LEU ARG TRP GLY LEU TYR THR PRO ASP GLN SEQRES 18 A 562 LYS HIS GLN LYS GLU PRO PRO PHE LEU TRP MET GLY TYR SEQRES 19 A 562 GLU LEU HIS PRO ASP LYS TRP THR VAL GLN PRO ILE VAL SEQRES 20 A 562 LEU PRO GLU LYS ASP SER TRP THR VAL ASN ASP ILE CYS SEQRES 21 A 562 LYS LEU VAL GLY LYS LEU ASN TRP ALA SER GLN ILE TYR SEQRES 22 A 562 PRO GLY ILE LYS VAL ARG GLN LEU SER LYS LEU LEU ARG SEQRES 23 A 562 GLY THR LYS ALA LEU THR GLU VAL ILE PRO LEU THR GLU SEQRES 24 A 562 GLU ALA GLU LEU GLU LEU ALA GLU ASN ARG GLU ILE LEU SEQRES 25 A 562 LYS GLU PRO VAL HIS GLY VAL TYR TYR ASP PRO SER LYS SEQRES 26 A 562 ASP LEU ILE ALA GLU ILE GLN LYS GLN GLY GLN GLY GLN SEQRES 27 A 562 TRP THR TYR GLN ILE TYR GLN GLU PRO PHE LYS ASN LEU SEQRES 28 A 562 LYS THR GLY LYS TYR ALA ARG MET ARG GLY ALA HIS THR SEQRES 29 A 562 ASN ASP VAL LYS GLN LEU THR GLU ALA VAL GLN LYS ILE SEQRES 30 A 562 THR THR GLU SER ILE VAL ILE TRP GLY LYS THR PRO LYS SEQRES 31 A 562 PHE LYS LEU PRO ILE GLN LYS GLU THR TRP GLU THR TRP SEQRES 32 A 562 TRP THR GLU TYR TRP GLN ALA THR TRP ILE PRO GLU TRP SEQRES 33 A 562 GLU PHE VAL ASN THR PRO PRO LEU VAL LYS LEU TRP TYR SEQRES 34 A 562 GLN LEU GLU LYS GLU PRO ILE VAL GLY ALA GLU THR PHE SEQRES 35 A 562 TYR VAL ASP GLY ALA ALA ASN ARG GLU THR LYS LEU GLY SEQRES 36 A 562 LYS ALA GLY TYR VAL THR ASN LYS GLY ARG GLN LYS VAL SEQRES 37 A 562 VAL PRO LEU THR ASN THR THR ASN GLN LYS THR GLU LEU SEQRES 38 A 562 GLN ALA ILE TYR LEU ALA LEU GLN ASP SER GLY LEU GLU SEQRES 39 A 562 VAL ASN ILE VAL THR ASP SER GLN TYR ALA LEU GLY ILE SEQRES 40 A 562 ILE GLN ALA GLN PRO ASP LYS SER GLU SER GLU LEU VAL SEQRES 41 A 562 ASN GLN ILE ILE GLU GLN LEU ILE LYS LYS GLU LYS VAL SEQRES 42 A 562 TYR LEU ALA TRP VAL PRO ALA HIS LYS GLY ILE GLY GLY SEQRES 43 A 562 ASN GLU GLN VAL ASP LYS LEU VAL SER ALA GLY ILE ARG SEQRES 44 A 562 LYS VAL LEU SEQRES 1 B 437 PRO ILE SER PRO ILE GLU THR VAL PRO VAL LYS LEU LYS SEQRES 2 B 437 PRO GLY MET ASP GLY PRO LYS VAL LYS GLN TRP PRO LEU SEQRES 3 B 437 THR GLU GLU LYS ILE LYS ALA LEU VAL GLU ILE CYS THR SEQRES 4 B 437 GLU MET GLU LYS GLU GLY LYS ILE SER LYS ILE GLY PRO SEQRES 5 B 437 GLU ASN PRO TYR ASN THR PRO VAL PHE ALA ILE LYS LYS SEQRES 6 B 437 LYS ASP SER THR LYS TRP ARG LYS LEU VAL ASP PHE ARG SEQRES 7 B 437 GLU LEU ASN LYS ARG THR GLN ASP PHE TRP GLU VAL GLN SEQRES 8 B 437 LEU GLY ILE PRO HIS PRO ALA GLY LEU LYS LYS LYS LYS SEQRES 9 B 437 SER VAL THR VAL LEU ASP VAL GLY ASP ALA TYR PHE SER SEQRES 10 B 437 VAL PRO LEU ASP GLU ASP PHE ARG LYS TYR THR ALA PHE SEQRES 11 B 437 THR ILE PRO SER ILE ASN ASN GLU THR PRO GLY ILE ARG SEQRES 12 B 437 TYR GLN TYR ASN VAL LEU PRO GLN GLY TRP LYS GLY SER SEQRES 13 B 437 PRO ALA ILE PHE GLN SER SER MET THR LYS ILE LEU GLU SEQRES 14 B 437 PRO PHE LYS LYS GLN ASN PRO ASP ILE VAL ILE TYR GLN SEQRES 15 B 437 TYR MET ASP ASP LEU TYR VAL GLY SER ASP LEU GLU ILE SEQRES 16 B 437 GLY GLN HIS ARG THR LYS ILE GLU GLU LEU ARG GLN HIS SEQRES 17 B 437 LEU LEU ARG TRP GLY LEU THR THR PRO ASP LYS LYS HIS SEQRES 18 B 437 GLN LYS GLU PRO PRO PHE LEU TRP MET GLY TYR GLU LEU SEQRES 19 B 437 HIS PRO ASP LYS TRP THR VAL GLN PRO ILE VAL LEU PRO SEQRES 20 B 437 GLU LYS ASP SER TRP THR VAL ASN ASP ILE GLN LYS LEU SEQRES 21 B 437 VAL GLY LYS LEU ASN TRP ALA SER GLN ILE TYR PRO GLY SEQRES 22 B 437 ILE LYS VAL ARG GLN LEU SER LYS LEU LEU ARG GLY THR SEQRES 23 B 437 LYS ALA LEU THR GLU VAL ILE PRO LEU THR GLU GLU ALA SEQRES 24 B 437 GLU LEU GLU LEU ALA GLU ASN ARG GLU ILE LEU LYS GLU SEQRES 25 B 437 PRO VAL HIS GLY VAL TYR TYR ASP PRO SER LYS ASP LEU SEQRES 26 B 437 ILE ALA GLU ILE GLN LYS GLN GLY GLN GLY GLN TRP THR SEQRES 27 B 437 TYR GLN ILE TYR GLN GLU PRO PHE LYS ASN LEU LYS THR SEQRES 28 B 437 GLY LYS TYR ALA ARG MET ARG GLY ALA HIS THR ASN ASP SEQRES 29 B 437 VAL LYS GLN LEU THR GLU ALA VAL GLN LYS ILE THR THR SEQRES 30 B 437 GLU SER ILE VAL ILE TRP GLY LYS THR PRO LYS PHE LYS SEQRES 31 B 437 LEU PRO ILE GLN LYS GLU THR TRP GLU THR TRP TRP THR SEQRES 32 B 437 GLU TYR TRP GLN ALA THR TRP ILE PRO GLU TRP GLU PHE SEQRES 33 B 437 VAL ASN THR PRO PRO LEU VAL LYS LEU TRP TYR GLN GLY SEQRES 34 B 437 GLY HIS HIS HIS HIS HIS HIS HIS SEQRES 1 C 27 DA DT DG DC DA DT DG DG DC DG DC DC DC SEQRES 2 C 27 DG DA DA DC DA DG DG DG DA DC DT DG DT SEQRES 3 C 27 DG SEQRES 1 D 22 DA DC DA DG DT DC DC DC DT DG DT DT DC SEQRES 2 D 22 DG DG MRG DC DG DC DC DA ATM SEQRES 1 E 562 MET VAL PRO ILE SER PRO ILE GLU THR VAL PRO VAL LYS SEQRES 2 E 562 LEU LYS PRO GLY MET ASP GLY PRO LYS VAL LYS GLN TRP SEQRES 3 E 562 PRO LEU THR GLU GLU LYS ILE LYS ALA LEU VAL GLU ILE SEQRES 4 E 562 CYS THR GLU LEU GLU LYS GLU GLY LYS ILE SER LYS ILE SEQRES 5 E 562 GLY PRO GLU ASN PRO TYR ASN THR PRO VAL PHE ALA ILE SEQRES 6 E 562 LYS LYS LYS ASN SER THR ARG TRP ARG LYS LEU VAL ASP SEQRES 7 E 562 PHE ARG GLU LEU ASN LYS ARG THR GLN ASP PHE TRP GLU SEQRES 8 E 562 VAL GLN LEU GLY ILE PRO HIS PRO ALA GLY LEU LYS LYS SEQRES 9 E 562 LYS LYS SER VAL THR VAL LEU ASP VAL GLY ASP ALA TYR SEQRES 10 E 562 PHE SER VAL PRO LEU ASP GLU ASP PHE ARG LYS TYR THR SEQRES 11 E 562 ALA PHE THR ILE PRO SER ILE ASN ASN GLU THR PRO GLY SEQRES 12 E 562 ILE ARG TYR GLN TYR ASN VAL LEU PRO GLN GLY TRP LYS SEQRES 13 E 562 GLY SER PRO ALA ILE PHE GLN SER SER MET THR LYS ILE SEQRES 14 E 562 LEU GLU PRO PHE LYS LYS GLN ASN PRO ASP ILE VAL ILE SEQRES 15 E 562 TYR GLN TYR MET ASP ASP LEU TYR VAL GLY SER ASP LEU SEQRES 16 E 562 GLU ILE GLY GLN HIS ARG THR LYS ILE GLU GLU LEU ARG SEQRES 17 E 562 GLN HIS LEU LEU ARG TRP GLY LEU TYR THR PRO ASP GLN SEQRES 18 E 562 LYS HIS GLN LYS GLU PRO PRO PHE LEU TRP MET GLY TYR SEQRES 19 E 562 GLU LEU HIS PRO ASP LYS TRP THR VAL GLN PRO ILE VAL SEQRES 20 E 562 LEU PRO GLU LYS ASP SER TRP THR VAL ASN ASP ILE CYS SEQRES 21 E 562 LYS LEU VAL GLY LYS LEU ASN TRP ALA SER GLN ILE TYR SEQRES 22 E 562 PRO GLY ILE LYS VAL ARG GLN LEU SER LYS LEU LEU ARG SEQRES 23 E 562 GLY THR LYS ALA LEU THR GLU VAL ILE PRO LEU THR GLU SEQRES 24 E 562 GLU ALA GLU LEU GLU LEU ALA GLU ASN ARG GLU ILE LEU SEQRES 25 E 562 LYS GLU PRO VAL HIS GLY VAL TYR TYR ASP PRO SER LYS SEQRES 26 E 562 ASP LEU ILE ALA GLU ILE GLN LYS GLN GLY GLN GLY GLN SEQRES 27 E 562 TRP THR TYR GLN ILE TYR GLN GLU PRO PHE LYS ASN LEU SEQRES 28 E 562 LYS THR GLY LYS TYR ALA ARG MET ARG GLY ALA HIS THR SEQRES 29 E 562 ASN ASP VAL LYS GLN LEU THR GLU ALA VAL GLN LYS ILE SEQRES 30 E 562 THR THR GLU SER ILE VAL ILE TRP GLY LYS THR PRO LYS SEQRES 31 E 562 PHE LYS LEU PRO ILE GLN LYS GLU THR TRP GLU THR TRP SEQRES 32 E 562 TRP THR GLU TYR TRP GLN ALA THR TRP ILE PRO GLU TRP SEQRES 33 E 562 GLU PHE VAL ASN THR PRO PRO LEU VAL LYS LEU TRP TYR SEQRES 34 E 562 GLN LEU GLU LYS GLU PRO ILE VAL GLY ALA GLU THR PHE SEQRES 35 E 562 TYR VAL ASP GLY ALA ALA ASN ARG GLU THR LYS LEU GLY SEQRES 36 E 562 LYS ALA GLY TYR VAL THR ASN LYS GLY ARG GLN LYS VAL SEQRES 37 E 562 VAL PRO LEU THR ASN THR THR ASN GLN LYS THR GLU LEU SEQRES 38 E 562 GLN ALA ILE TYR LEU ALA LEU GLN ASP SER GLY LEU GLU SEQRES 39 E 562 VAL ASN ILE VAL THR ASP SER GLN TYR ALA LEU GLY ILE SEQRES 40 E 562 ILE GLN ALA GLN PRO ASP LYS SER GLU SER GLU LEU VAL SEQRES 41 E 562 ASN GLN ILE ILE GLU GLN LEU ILE LYS LYS GLU LYS VAL SEQRES 42 E 562 TYR LEU ALA TRP VAL PRO ALA HIS LYS GLY ILE GLY GLY SEQRES 43 E 562 ASN GLU GLN VAL ASP LYS LEU VAL SER ALA GLY ILE ARG SEQRES 44 E 562 LYS VAL LEU SEQRES 1 F 437 PRO ILE SER PRO ILE GLU THR VAL PRO VAL LYS LEU LYS SEQRES 2 F 437 PRO GLY MET ASP GLY PRO LYS VAL LYS GLN TRP PRO LEU SEQRES 3 F 437 THR GLU GLU LYS ILE LYS ALA LEU VAL GLU ILE CYS THR SEQRES 4 F 437 GLU MET GLU LYS GLU GLY LYS ILE SER LYS ILE GLY PRO SEQRES 5 F 437 GLU ASN PRO TYR ASN THR PRO VAL PHE ALA ILE LYS LYS SEQRES 6 F 437 LYS ASP SER THR LYS TRP ARG LYS LEU VAL ASP PHE ARG SEQRES 7 F 437 GLU LEU ASN LYS ARG THR GLN ASP PHE TRP GLU VAL GLN SEQRES 8 F 437 LEU GLY ILE PRO HIS PRO ALA GLY LEU LYS LYS LYS LYS SEQRES 9 F 437 SER VAL THR VAL LEU ASP VAL GLY ASP ALA TYR PHE SER SEQRES 10 F 437 VAL PRO LEU ASP GLU ASP PHE ARG LYS TYR THR ALA PHE SEQRES 11 F 437 THR ILE PRO SER ILE ASN ASN GLU THR PRO GLY ILE ARG SEQRES 12 F 437 TYR GLN TYR ASN VAL LEU PRO GLN GLY TRP LYS GLY SER SEQRES 13 F 437 PRO ALA ILE PHE GLN SER SER MET THR LYS ILE LEU GLU SEQRES 14 F 437 PRO PHE LYS LYS GLN ASN PRO ASP ILE VAL ILE TYR GLN SEQRES 15 F 437 TYR MET ASP ASP LEU TYR VAL GLY SER ASP LEU GLU ILE SEQRES 16 F 437 GLY GLN HIS ARG THR LYS ILE GLU GLU LEU ARG GLN HIS SEQRES 17 F 437 LEU LEU ARG TRP GLY LEU THR THR PRO ASP LYS LYS HIS SEQRES 18 F 437 GLN LYS GLU PRO PRO PHE LEU TRP MET GLY TYR GLU LEU SEQRES 19 F 437 HIS PRO ASP LYS TRP THR VAL GLN PRO ILE VAL LEU PRO SEQRES 20 F 437 GLU LYS ASP SER TRP THR VAL ASN ASP ILE GLN LYS LEU SEQRES 21 F 437 VAL GLY LYS LEU ASN TRP ALA SER GLN ILE TYR PRO GLY SEQRES 22 F 437 ILE LYS VAL ARG GLN LEU SER LYS LEU LEU ARG GLY THR SEQRES 23 F 437 LYS ALA LEU THR GLU VAL ILE PRO LEU THR GLU GLU ALA SEQRES 24 F 437 GLU LEU GLU LEU ALA GLU ASN ARG GLU ILE LEU LYS GLU SEQRES 25 F 437 PRO VAL HIS GLY VAL TYR TYR ASP PRO SER LYS ASP LEU SEQRES 26 F 437 ILE ALA GLU ILE GLN LYS GLN GLY GLN GLY GLN TRP THR SEQRES 27 F 437 TYR GLN ILE TYR GLN GLU PRO PHE LYS ASN LEU LYS THR SEQRES 28 F 437 GLY LYS TYR ALA ARG MET ARG GLY ALA HIS THR ASN ASP SEQRES 29 F 437 VAL LYS GLN LEU THR GLU ALA VAL GLN LYS ILE THR THR SEQRES 30 F 437 GLU SER ILE VAL ILE TRP GLY LYS THR PRO LYS PHE LYS SEQRES 31 F 437 LEU PRO ILE GLN LYS GLU THR TRP GLU THR TRP TRP THR SEQRES 32 F 437 GLU TYR TRP GLN ALA THR TRP ILE PRO GLU TRP GLU PHE SEQRES 33 F 437 VAL ASN THR PRO PRO LEU VAL LYS LEU TRP TYR GLN GLY SEQRES 34 F 437 GLY HIS HIS HIS HIS HIS HIS HIS SEQRES 1 G 27 DA DT DG DC DA DT DG DG DC DG DC DC DC SEQRES 2 G 27 DG DA DA DC DA DG DG DG DA DC DT DG DT SEQRES 3 G 27 DG SEQRES 1 H 22 DA DC DA DG DT DC DC DC DT DG DT DT DC SEQRES 2 H 22 DG DG MRG DC DG DC DC DA ATM MODRES 3KLG MRG D 817 DG MODRES 3KLG ATM D 823 DT MODRES 3KLG MRG H 817 DG MODRES 3KLG ATM H 823 DT HET MRG D 817 26 HET ATM D 823 22 HET MRG H 817 26 HET ATM H 823 22 HETNAM MRG N2-(3-MERCAPTOPROPYL)-2'-DEOXYGUANOSINE-5'- HETNAM 2 MRG MONOPHOSPHATE HETNAM ATM 3'-AZIDO-3'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE FORMUL 4 MRG 2(C13 H20 N5 O7 P S) FORMUL 4 ATM 2(C10 H14 N5 O7 P) HELIX 1 1 THR A 27 GLY A 45 1 19 HELIX 2 2 ASP A 113 VAL A 118 5 6 HELIX 3 3 ASP A 121 THR A 128 5 8 HELIX 4 4 GLY A 155 ASN A 175 1 21 HELIX 5 5 GLU A 194 TRP A 212 1 19 HELIX 6 6 THR A 253 ALA A 267 1 15 HELIX 7 7 GLU A 298 LEU A 310 1 13 HELIX 8 8 ASN A 363 TRP A 383 1 21 HELIX 9 9 GLN A 394 TRP A 402 1 9 HELIX 10 10 THR A 473 ASP A 488 1 16 HELIX 11 11 SER A 499 ALA A 508 1 10 HELIX 12 12 GLU A 516 LYS A 528 1 13 HELIX 13 13 GLY A 544 LEU A 551 1 8 HELIX 14 14 THR B 27 GLU B 44 1 18 HELIX 15 15 PHE B 77 THR B 84 1 8 HELIX 16 16 GLN B 85 PHE B 87 5 3 HELIX 17 17 PRO B 97 LYS B 101 5 5 HELIX 18 18 GLY B 112 PHE B 116 5 5 HELIX 19 19 ASP B 121 LYS B 126 1 6 HELIX 20 20 GLY B 155 PHE B 160 1 6 HELIX 21 21 PHE B 160 LEU B 168 1 9 HELIX 22 22 LEU B 168 ASN B 175 1 8 HELIX 23 23 HIS B 198 ARG B 211 1 14 HELIX 24 24 THR B 253 TYR B 271 1 19 HELIX 25 25 VAL B 276 LYS B 281 1 6 HELIX 26 26 LEU B 282 ARG B 284 5 3 HELIX 27 27 THR B 296 LEU B 310 1 15 HELIX 28 28 ASN B 363 TRP B 383 1 21 HELIX 29 29 GLN B 394 THR B 400 1 7 HELIX 30 30 THR E 27 ALA E 33 1 7 HELIX 31 31 LEU E 34 GLU E 44 1 11 HELIX 32 32 ALA E 114 VAL E 118 5 5 HELIX 33 33 ASP E 121 TYR E 127 5 7 HELIX 34 34 GLY E 155 ASN E 175 1 21 HELIX 35 35 GLU E 194 TRP E 212 1 19 HELIX 36 36 THR E 253 ALA E 267 1 15 HELIX 37 37 LEU E 279 LEU E 283 5 5 HELIX 38 38 GLU E 298 LEU E 310 1 13 HELIX 39 39 ASN E 363 ILE E 380 1 18 HELIX 40 40 GLN E 394 TRP E 402 1 9 HELIX 41 41 THR E 473 ASP E 488 1 16 HELIX 42 42 SER E 499 ALA E 508 1 10 HELIX 43 43 GLU E 516 LYS E 528 1 13 HELIX 44 44 GLY E 544 LEU E 551 1 8 HELIX 45 45 THR F 27 GLU F 44 1 18 HELIX 46 46 PHE F 77 THR F 84 1 8 HELIX 47 47 PRO F 97 LYS F 101 5 5 HELIX 48 48 GLY F 112 PHE F 116 5 5 HELIX 49 49 ASP F 123 THR F 128 5 6 HELIX 50 50 GLY F 155 PHE F 160 1 6 HELIX 51 51 PHE F 160 LEU F 168 1 9 HELIX 52 52 LEU F 168 ASN F 175 1 8 HELIX 53 53 HIS F 198 LEU F 210 1 13 HELIX 54 54 THR F 253 TYR F 271 1 19 HELIX 55 55 VAL F 276 LYS F 281 1 6 HELIX 56 56 LEU F 282 ARG F 284 5 3 HELIX 57 57 THR F 296 LEU F 310 1 15 HELIX 58 58 ASN F 363 TRP F 383 1 21 HELIX 59 59 GLN F 394 THR F 400 1 7 SHEET 1 A 2 SER A 48 LYS A 49 0 SHEET 2 A 2 TYR A 144 GLN A 145 -1 O GLN A 145 N SER A 48 SHEET 1 B 2 ILE A 63 LYS A 64 0 SHEET 2 B 2 TRP A 71 ARG A 72 -1 O ARG A 72 N ILE A 63 SHEET 1 C 3 SER A 105 ASP A 110 0 SHEET 2 C 3 ASP A 186 SER A 191 -1 O VAL A 189 N THR A 107 SHEET 3 C 3 VAL A 179 TYR A 183 -1 N TYR A 183 O ASP A 186 SHEET 1 D 3 TYR A 232 LEU A 234 0 SHEET 2 D 3 LYS A 238 VAL A 241 -1 O THR A 240 N GLU A 233 SHEET 3 D 3 GLY A 316 VAL A 317 -1 O GLY A 316 N TRP A 239 SHEET 1 E 5 ASN A 348 TYR A 354 0 SHEET 2 E 5 TRP A 337 TYR A 342 -1 N TYR A 339 O GLY A 352 SHEET 3 E 5 ILE A 326 LYS A 331 -1 N ILE A 326 O TYR A 342 SHEET 4 E 5 LYS A 388 LEU A 391 1 O LYS A 388 N ALA A 327 SHEET 5 E 5 TRP A 414 PHE A 416 1 O GLU A 415 N PHE A 389 SHEET 1 F 8 LYS A 530 TRP A 535 0 SHEET 2 F 8 GLU A 492 THR A 497 1 N ILE A 495 O ALA A 534 SHEET 3 F 8 GLU A 438 GLY A 444 1 N VAL A 442 O VAL A 496 SHEET 4 F 8 ALA A 455 VAL A 458 -1 O VAL A 458 N TYR A 441 SHEET 5 F 8 GLN A 464 VAL A 467 -1 O VAL A 467 N ALA A 455 SHEET 6 F 8 GLN E 464 LEU E 469 -1 O GLN E 464 N VAL A 466 SHEET 7 F 8 GLY E 453 VAL E 458 -1 N TYR E 457 O LYS E 465 SHEET 8 F 8 ASP E 443 GLY E 444 -1 N ASP E 443 O GLY E 456 SHEET 1 G 3 ILE B 47 LYS B 49 0 SHEET 2 G 3 ILE B 142 TYR B 146 -1 O GLN B 145 N SER B 48 SHEET 3 G 3 ALA B 129 ILE B 132 -1 N PHE B 130 O TYR B 144 SHEET 1 H 2 VAL B 60 ILE B 63 0 SHEET 2 H 2 ARG B 72 VAL B 75 -1 O LEU B 74 N PHE B 61 SHEET 1 I 4 VAL B 179 TYR B 183 0 SHEET 2 I 4 ASP B 186 SER B 191 -1 O GLY B 190 N VAL B 179 SHEET 3 I 4 SER B 105 LEU B 109 -1 N LEU B 109 O LEU B 187 SHEET 4 I 4 GLU B 233 LEU B 234 -1 O LEU B 234 N VAL B 106 SHEET 1 J 5 LYS B 347 THR B 351 0 SHEET 2 J 5 GLN B 336 GLU B 344 -1 N ILE B 341 O LEU B 349 SHEET 3 J 5 LEU B 325 GLY B 333 -1 N GLY B 333 O GLN B 336 SHEET 4 J 5 PRO B 387 LYS B 390 1 O LYS B 390 N ALA B 327 SHEET 5 J 5 TRP B 414 GLU B 415 1 N GLU B 415 O PHE B 389 SHEET 1 K 3 ILE E 47 LYS E 49 0 SHEET 2 K 3 ARG E 143 TYR E 146 -1 O GLN E 145 N SER E 48 SHEET 3 K 3 ALA E 129 THR E 131 -1 N PHE E 130 O TYR E 144 SHEET 1 L 2 VAL E 60 LYS E 64 0 SHEET 2 L 2 TRP E 71 VAL E 75 -1 O LEU E 74 N PHE E 61 SHEET 1 M 3 SER E 105 ASP E 110 0 SHEET 2 M 3 ASP E 186 SER E 191 -1 O VAL E 189 N THR E 107 SHEET 3 M 3 VAL E 179 TYR E 183 -1 N TYR E 183 O ASP E 186 SHEET 1 N 2 TYR E 232 LEU E 234 0 SHEET 2 N 2 TRP E 239 VAL E 241 -1 O THR E 240 N GLU E 233 SHEET 1 O 5 LYS E 350 TYR E 354 0 SHEET 2 O 5 TRP E 337 TYR E 342 -1 N TYR E 339 O GLY E 352 SHEET 3 O 5 ILE E 326 LYS E 331 -1 N GLU E 328 O GLN E 340 SHEET 4 O 5 LYS E 388 LEU E 391 1 O LYS E 388 N ALA E 327 SHEET 5 O 5 TRP E 414 PHE E 416 1 O GLU E 415 N PHE E 389 SHEET 1 P 3 GLU E 438 TYR E 441 0 SHEET 2 P 3 GLU E 492 THR E 497 1 O VAL E 496 N PHE E 440 SHEET 3 P 3 LYS E 530 TRP E 535 1 O ALA E 534 N ILE E 495 SHEET 1 Q 3 ILE F 47 LYS F 49 0 SHEET 2 Q 3 ILE F 142 TYR F 146 -1 O GLN F 145 N SER F 48 SHEET 3 Q 3 PHE F 130 ILE F 132 -1 N PHE F 130 O TYR F 144 SHEET 1 R 2 VAL F 60 ILE F 63 0 SHEET 2 R 2 ARG F 72 VAL F 75 -1 O LEU F 74 N PHE F 61 SHEET 1 S 3 SER F 105 LEU F 109 0 SHEET 2 S 3 ASP F 186 SER F 191 -1 O VAL F 189 N THR F 107 SHEET 3 S 3 VAL F 179 TYR F 183 -1 N TYR F 181 O TYR F 188 SHEET 1 T 5 LYS F 347 TYR F 354 0 SHEET 2 T 5 GLN F 336 GLU F 344 -1 N ILE F 341 O LEU F 349 SHEET 3 T 5 LEU F 325 GLY F 333 -1 N GLN F 330 O THR F 338 SHEET 4 T 5 PRO F 387 LYS F 390 1 O LYS F 390 N ALA F 327 SHEET 5 T 5 TRP F 414 GLU F 415 1 N GLU F 415 O PHE F 389 LINK O3' DG D 816 P MRG D 817 1555 1555 1.59 LINK O3' MRG D 817 P DC D 818 1555 1555 1.61 LINK O3' DA D 822 P ATM D 823 1555 1555 1.62 LINK O3' DG H 816 P MRG H 817 1555 1555 1.61 LINK O3' MRG H 817 P DC H 818 1555 1555 1.61 LINK O3' DA H 822 P ATM H 823 1555 1555 1.61 CISPEP 1 PRO A 420 PRO A 421 0 -1.10 CISPEP 2 PRO E 420 PRO E 421 0 -1.23 CRYST1 79.120 154.400 277.920 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012639 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006477 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003598 0.00000