HEADER OXIDOREDUCTASE 13-NOV-09 3KOQ TITLE CRYSTAL STRUCTURE OF A NITROREDUCTASE FAMILY PROTEIN (CD3355) FROM TITLE 2 CLOSTRIDIUM DIFFICILE 630 AT 1.58 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: NITROREDUCTASE FAMILY PROTEIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM DIFFICILE; SOURCE 3 ORGANISM_TAXID: 272563; SOURCE 4 STRAIN: 630; SOURCE 5 GENE: CD3355; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, KEYWDS 2 PROTEIN STRUCTURE INITIATIVE, PSI-2, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 6 30-OCT-24 3KOQ 1 REMARK SEQADV REVDAT 5 17-JUL-19 3KOQ 1 REMARK LINK REVDAT 4 25-OCT-17 3KOQ 1 REMARK REVDAT 3 13-JUL-11 3KOQ 1 VERSN REVDAT 2 23-MAR-11 3KOQ 1 TITLE KEYWDS REVDAT 1 01-DEC-09 3KOQ 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF NITROREDUCTASE FAMILY PROTEIN JRNL TITL 2 (YP_001089872.1) FROM CLOSTRIDIUM DIFFICILE 630 AT 1.58 A JRNL TITL 3 RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.58 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.58 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.37 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 117448 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5893 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.58 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.62 REMARK 3 REFLECTION IN BIN (WORKING SET) : 8167 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.53 REMARK 3 BIN R VALUE (WORKING SET) : 0.2420 REMARK 3 BIN FREE R VALUE SET COUNT : 430 REMARK 3 BIN FREE R VALUE : 0.3160 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5524 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 204 REMARK 3 SOLVENT ATOMS : 875 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.52 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.10000 REMARK 3 B22 (A**2) : 0.23000 REMARK 3 B33 (A**2) : -0.26000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.15000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.083 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.088 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.059 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.613 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.933 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6211 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 4314 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8459 ; 1.594 ; 2.021 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10607 ; 1.006 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 765 ; 5.936 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 270 ;32.626 ;24.667 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1152 ;12.074 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 44 ;14.483 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 934 ; 0.097 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6823 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1133 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1298 ; 0.215 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 4877 ; 0.207 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3061 ; 0.175 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 3070 ; 0.086 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 732 ; 0.159 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 10 ; 0.087 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 36 ; 0.216 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 28 ; 0.188 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4105 ; 2.159 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1445 ; 0.580 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6095 ; 2.590 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2783 ; 4.429 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2364 ; 5.859 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR REMARK 3 SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE REMARK 3 OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 3. A FLAVIN MONONUCLEOTIDE (FMN) MOLECULE IS REMARK 3 MODELED INTO THE PUTATIVE ACTIVE SITE ON EACH SUBUNIT. THE FMN REMARK 3 RESTRAINTS WERE CHANGED TO ALLOW BENDING OF THE ISOALLOXAZINE REMARK 3 RING ALONG THE N5-N10 VIRTUAL AXIS RESULTING IN AN IMPROVED FIT REMARK 3 BETWEEN THE FMN COORDINATES AND ELECTRON DENSITY. 4. CL (CL) REMARK 3 IONS FROM PROTEIN BUFFER SOLUTION AND GLYCEROL (GOL) MOLECULES REMARK 3 FROM CRYO SOLUTION ARE MODELED. REMARK 4 REMARK 4 3KOQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-NOV-09. REMARK 100 THE DEPOSITION ID IS D_1000056256. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-MAR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97920 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : FLAT COLLIMATING MIRROR, TOROID REMARK 200 FOCUSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.2.5 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 117477 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.580 REMARK 200 RESOLUTION RANGE LOW (A) : 29.374 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.12300 REMARK 200 R SYM (I) : 0.12300 REMARK 200 FOR THE DATA SET : 9.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.58 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.62 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.75000 REMARK 200 R SYM FOR SHELL (I) : 0.75000 REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20.0000% 2-PROPANOL, 20.0000% REMARK 280 POLYETHYLENE GLYCOL 4000, 0.1M CITRIC ACID PH 5.6, 0.001 M NADH REMARK 280 (NICOTINAMIDE-ADENINE DINUCLEOTIDE, REDUCED), NANODROP, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 43.96200 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: ANALYTICAL SIZE EXCLUSION CHROMATOGRAPHY WITH STATIC REMARK 300 LIGHT SCATTERING SUPPORTS THE ASSIGNMENT OF A DIMER AS A REMARK 300 SIGNIFICANT OLIGOMERIZATION STATE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14050 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -51.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -51.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -18 REMARK 465 GLY A -17 REMARK 465 SER A -16 REMARK 465 ASP A -15 REMARK 465 LYS A -14 REMARK 465 ILE A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 PHE A -2 REMARK 465 GLN A -1 REMARK 465 MSE B -18 REMARK 465 GLY B -17 REMARK 465 SER B -16 REMARK 465 ASP B -15 REMARK 465 LYS B -14 REMARK 465 ILE B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 HIS B -9 REMARK 465 HIS B -8 REMARK 465 HIS B -7 REMARK 465 GLU B -6 REMARK 465 ASN B -5 REMARK 465 LEU B -4 REMARK 465 TYR B -3 REMARK 465 PHE B -2 REMARK 465 GLN B -1 REMARK 465 GLY B 0 REMARK 465 MSE C -18 REMARK 465 GLY C -17 REMARK 465 SER C -16 REMARK 465 ASP C -15 REMARK 465 LYS C -14 REMARK 465 ILE C -13 REMARK 465 HIS C -12 REMARK 465 HIS C -11 REMARK 465 HIS C -10 REMARK 465 HIS C -9 REMARK 465 HIS C -8 REMARK 465 HIS C -7 REMARK 465 GLU C -6 REMARK 465 ASN C -5 REMARK 465 LEU C -4 REMARK 465 TYR C -3 REMARK 465 PHE C -2 REMARK 465 GLN C -1 REMARK 465 GLY C 0 REMARK 465 MSE D -18 REMARK 465 GLY D -17 REMARK 465 SER D -16 REMARK 465 ASP D -15 REMARK 465 LYS D -14 REMARK 465 ILE D -13 REMARK 465 HIS D -12 REMARK 465 HIS D -11 REMARK 465 HIS D -10 REMARK 465 HIS D -9 REMARK 465 HIS D -8 REMARK 465 HIS D -7 REMARK 465 GLU D -6 REMARK 465 ASN D -5 REMARK 465 LEU D -4 REMARK 465 TYR D -3 REMARK 465 PHE D -2 REMARK 465 GLN D -1 REMARK 465 GLY D 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 61 CE NZ REMARK 470 LYS A 158 CE NZ REMARK 470 LYS B 78 CE NZ REMARK 470 GLU B 157 CD OE1 OE2 REMARK 470 LYS B 158 CE NZ REMARK 470 LYS C 53 CD CE NZ REMARK 470 LYS C 61 CE NZ REMARK 470 LYS C 78 CE NZ REMARK 470 LYS D 53 CE NZ REMARK 470 LYS D 78 CE NZ REMARK 470 LYS D 158 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 14 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 ARG C 14 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG C 14 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 ARG C 155 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 148 -133.72 -114.24 REMARK 500 GLU A 170 -44.39 71.43 REMARK 500 ILE B 138 -60.83 -107.65 REMARK 500 GLU B 170 -45.54 73.78 REMARK 500 GLU C 170 -44.80 76.95 REMARK 500 LYS D 148 -135.03 -111.96 REMARK 500 GLU D 170 -40.12 68.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 854 DISTANCE = 7.27 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMN A 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 173 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 174 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 175 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 176 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMN B 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 173 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 174 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 175 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 176 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 177 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMN C 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 173 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 174 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 175 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMN D 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL D 173 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL D 174 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL D 175 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 391667 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG FOLLOWED BY THE TARGET SEQUENCE. DBREF 3KOQ A 1 172 UNP Q180K0 Q180K0_CLOD6 1 172 DBREF 3KOQ B 1 172 UNP Q180K0 Q180K0_CLOD6 1 172 DBREF 3KOQ C 1 172 UNP Q180K0 Q180K0_CLOD6 1 172 DBREF 3KOQ D 1 172 UNP Q180K0 Q180K0_CLOD6 1 172 SEQADV 3KOQ MSE A -18 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ GLY A -17 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ SER A -16 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ ASP A -15 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ LYS A -14 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ ILE A -13 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ HIS A -12 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ HIS A -11 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ HIS A -10 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ HIS A -9 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ HIS A -8 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ HIS A -7 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ GLU A -6 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ ASN A -5 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ LEU A -4 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ TYR A -3 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ PHE A -2 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ GLN A -1 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ GLY A 0 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ MSE B -18 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ GLY B -17 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ SER B -16 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ ASP B -15 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ LYS B -14 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ ILE B -13 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ HIS B -12 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ HIS B -11 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ HIS B -10 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ HIS B -9 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ HIS B -8 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ HIS B -7 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ GLU B -6 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ ASN B -5 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ LEU B -4 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ TYR B -3 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ PHE B -2 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ GLN B -1 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ GLY B 0 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ MSE C -18 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ GLY C -17 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ SER C -16 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ ASP C -15 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ LYS C -14 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ ILE C -13 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ HIS C -12 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ HIS C -11 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ HIS C -10 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ HIS C -9 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ HIS C -8 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ HIS C -7 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ GLU C -6 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ ASN C -5 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ LEU C -4 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ TYR C -3 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ PHE C -2 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ GLN C -1 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ GLY C 0 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ MSE D -18 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ GLY D -17 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ SER D -16 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ ASP D -15 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ LYS D -14 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ ILE D -13 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ HIS D -12 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ HIS D -11 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ HIS D -10 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ HIS D -9 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ HIS D -8 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ HIS D -7 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ GLU D -6 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ ASN D -5 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ LEU D -4 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ TYR D -3 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ PHE D -2 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ GLN D -1 UNP Q180K0 EXPRESSION TAG SEQADV 3KOQ GLY D 0 UNP Q180K0 EXPRESSION TAG SEQRES 1 A 191 MSE GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS GLU SEQRES 2 A 191 ASN LEU TYR PHE GLN GLY MSE ASN PHE VAL GLU LEU ALA SEQRES 3 A 191 LYS LYS ARG TYR SER CYS ARG ASN TYR GLN ASP ARG LYS SEQRES 4 A 191 VAL GLU LYS GLU LYS LEU GLU LYS VAL LEU ASP VAL ALA SEQRES 5 A 191 ARG ILE ALA PRO THR GLY GLY ASN ARG GLN PRO GLN ARG SEQRES 6 A 191 LEU ILE VAL ILE GLN GLU LYS GLU GLY ILE ASN LYS LEU SEQRES 7 A 191 SER LYS ALA ALA ASN ILE TYR ASP ALA PRO LEU ALA ILE SEQRES 8 A 191 LEU VAL CYS GLY ASP LYS ASP LYS VAL TRP THR ARG PRO SEQRES 9 A 191 PHE ASP GLY LYS GLN LEU THR ASP ILE ASP THR SER ILE SEQRES 10 A 191 VAL THR ASP HIS MSE MSE LEU GLN ALA THR GLU LEU GLY SEQRES 11 A 191 LEU ALA SER VAL TRP VAL CYS TYR PHE ASN PRO ASP ILE SEQRES 12 A 191 ILE ARG GLU GLU PHE SER LEU PRO ASP ASN LEU GLU PRO SEQRES 13 A 191 ILE ASN ILE LEU LEU MSE GLY TYR GLU SER LYS ILE PRO SEQRES 14 A 191 GLU SER PRO GLU ARG HIS GLU LYS THR ARG VAL PRO LEU SEQRES 15 A 191 SER GLU ILE VAL SER TYR GLU THR LEU SEQRES 1 B 191 MSE GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS GLU SEQRES 2 B 191 ASN LEU TYR PHE GLN GLY MSE ASN PHE VAL GLU LEU ALA SEQRES 3 B 191 LYS LYS ARG TYR SER CYS ARG ASN TYR GLN ASP ARG LYS SEQRES 4 B 191 VAL GLU LYS GLU LYS LEU GLU LYS VAL LEU ASP VAL ALA SEQRES 5 B 191 ARG ILE ALA PRO THR GLY GLY ASN ARG GLN PRO GLN ARG SEQRES 6 B 191 LEU ILE VAL ILE GLN GLU LYS GLU GLY ILE ASN LYS LEU SEQRES 7 B 191 SER LYS ALA ALA ASN ILE TYR ASP ALA PRO LEU ALA ILE SEQRES 8 B 191 LEU VAL CYS GLY ASP LYS ASP LYS VAL TRP THR ARG PRO SEQRES 9 B 191 PHE ASP GLY LYS GLN LEU THR ASP ILE ASP THR SER ILE SEQRES 10 B 191 VAL THR ASP HIS MSE MSE LEU GLN ALA THR GLU LEU GLY SEQRES 11 B 191 LEU ALA SER VAL TRP VAL CYS TYR PHE ASN PRO ASP ILE SEQRES 12 B 191 ILE ARG GLU GLU PHE SER LEU PRO ASP ASN LEU GLU PRO SEQRES 13 B 191 ILE ASN ILE LEU LEU MSE GLY TYR GLU SER LYS ILE PRO SEQRES 14 B 191 GLU SER PRO GLU ARG HIS GLU LYS THR ARG VAL PRO LEU SEQRES 15 B 191 SER GLU ILE VAL SER TYR GLU THR LEU SEQRES 1 C 191 MSE GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS GLU SEQRES 2 C 191 ASN LEU TYR PHE GLN GLY MSE ASN PHE VAL GLU LEU ALA SEQRES 3 C 191 LYS LYS ARG TYR SER CYS ARG ASN TYR GLN ASP ARG LYS SEQRES 4 C 191 VAL GLU LYS GLU LYS LEU GLU LYS VAL LEU ASP VAL ALA SEQRES 5 C 191 ARG ILE ALA PRO THR GLY GLY ASN ARG GLN PRO GLN ARG SEQRES 6 C 191 LEU ILE VAL ILE GLN GLU LYS GLU GLY ILE ASN LYS LEU SEQRES 7 C 191 SER LYS ALA ALA ASN ILE TYR ASP ALA PRO LEU ALA ILE SEQRES 8 C 191 LEU VAL CYS GLY ASP LYS ASP LYS VAL TRP THR ARG PRO SEQRES 9 C 191 PHE ASP GLY LYS GLN LEU THR ASP ILE ASP THR SER ILE SEQRES 10 C 191 VAL THR ASP HIS MSE MSE LEU GLN ALA THR GLU LEU GLY SEQRES 11 C 191 LEU ALA SER VAL TRP VAL CYS TYR PHE ASN PRO ASP ILE SEQRES 12 C 191 ILE ARG GLU GLU PHE SER LEU PRO ASP ASN LEU GLU PRO SEQRES 13 C 191 ILE ASN ILE LEU LEU MSE GLY TYR GLU SER LYS ILE PRO SEQRES 14 C 191 GLU SER PRO GLU ARG HIS GLU LYS THR ARG VAL PRO LEU SEQRES 15 C 191 SER GLU ILE VAL SER TYR GLU THR LEU SEQRES 1 D 191 MSE GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS GLU SEQRES 2 D 191 ASN LEU TYR PHE GLN GLY MSE ASN PHE VAL GLU LEU ALA SEQRES 3 D 191 LYS LYS ARG TYR SER CYS ARG ASN TYR GLN ASP ARG LYS SEQRES 4 D 191 VAL GLU LYS GLU LYS LEU GLU LYS VAL LEU ASP VAL ALA SEQRES 5 D 191 ARG ILE ALA PRO THR GLY GLY ASN ARG GLN PRO GLN ARG SEQRES 6 D 191 LEU ILE VAL ILE GLN GLU LYS GLU GLY ILE ASN LYS LEU SEQRES 7 D 191 SER LYS ALA ALA ASN ILE TYR ASP ALA PRO LEU ALA ILE SEQRES 8 D 191 LEU VAL CYS GLY ASP LYS ASP LYS VAL TRP THR ARG PRO SEQRES 9 D 191 PHE ASP GLY LYS GLN LEU THR ASP ILE ASP THR SER ILE SEQRES 10 D 191 VAL THR ASP HIS MSE MSE LEU GLN ALA THR GLU LEU GLY SEQRES 11 D 191 LEU ALA SER VAL TRP VAL CYS TYR PHE ASN PRO ASP ILE SEQRES 12 D 191 ILE ARG GLU GLU PHE SER LEU PRO ASP ASN LEU GLU PRO SEQRES 13 D 191 ILE ASN ILE LEU LEU MSE GLY TYR GLU SER LYS ILE PRO SEQRES 14 D 191 GLU SER PRO GLU ARG HIS GLU LYS THR ARG VAL PRO LEU SEQRES 15 D 191 SER GLU ILE VAL SER TYR GLU THR LEU MODRES 3KOQ MSE A 1 MET SELENOMETHIONINE MODRES 3KOQ MSE A 103 MET SELENOMETHIONINE MODRES 3KOQ MSE A 104 MET SELENOMETHIONINE MODRES 3KOQ MSE A 143 MET SELENOMETHIONINE MODRES 3KOQ MSE B 1 MET SELENOMETHIONINE MODRES 3KOQ MSE B 103 MET SELENOMETHIONINE MODRES 3KOQ MSE B 104 MET SELENOMETHIONINE MODRES 3KOQ MSE B 143 MET SELENOMETHIONINE MODRES 3KOQ MSE C 1 MET SELENOMETHIONINE MODRES 3KOQ MSE C 103 MET SELENOMETHIONINE MODRES 3KOQ MSE C 104 MET SELENOMETHIONINE MODRES 3KOQ MSE C 143 MET SELENOMETHIONINE MODRES 3KOQ MSE D 1 MET SELENOMETHIONINE MODRES 3KOQ MSE D 103 MET SELENOMETHIONINE MODRES 3KOQ MSE D 104 MET SELENOMETHIONINE MODRES 3KOQ MSE D 143 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 103 8 HET MSE A 104 8 HET MSE A 143 16 HET MSE B 1 8 HET MSE B 103 8 HET MSE B 104 8 HET MSE B 143 16 HET MSE C 1 8 HET MSE C 103 8 HET MSE C 104 8 HET MSE C 143 16 HET MSE D 1 8 HET MSE D 103 8 HET MSE D 104 8 HET MSE D 143 16 HET FMN A 300 31 HET GOL A 173 6 HET GOL A 174 6 HET GOL A 175 6 HET GOL A 176 6 HET FMN B 300 31 HET CL B 173 1 HET CL B 174 1 HET GOL B 175 6 HET GOL B 176 6 HET GOL B 177 6 HET FMN C 300 31 HET GOL C 173 6 HET GOL C 174 12 HET GOL C 175 6 HET FMN D 300 31 HET GOL D 173 6 HET GOL D 174 6 HET GOL D 175 6 HETNAM MSE SELENOMETHIONINE HETNAM FMN FLAVIN MONONUCLEOTIDE HETNAM GOL GLYCEROL HETNAM CL CHLORIDE ION HETSYN FMN RIBOFLAVIN MONOPHOSPHATE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 16(C5 H11 N O2 SE) FORMUL 5 FMN 4(C17 H21 N4 O9 P) FORMUL 6 GOL 13(C3 H8 O3) FORMUL 11 CL 2(CL 1-) FORMUL 24 HOH *875(H2 O) HELIX 1 1 ASN A 2 ARG A 10 1 9 HELIX 2 2 GLU A 22 ALA A 36 1 15 HELIX 3 3 THR A 38 ARG A 42 5 5 HELIX 4 4 GLU A 52 ALA A 63 1 12 HELIX 5 5 LEU A 91 LEU A 110 1 20 HELIX 6 6 ASN A 121 PHE A 129 1 9 HELIX 7 7 ARG A 155 ARG A 160 1 6 HELIX 8 8 PRO A 162 GLU A 165 5 4 HELIX 9 9 ASN B 2 ARG B 10 1 9 HELIX 10 10 GLU B 22 ALA B 36 1 15 HELIX 11 11 THR B 38 ARG B 42 5 5 HELIX 12 12 GLU B 52 ALA B 63 1 12 HELIX 13 13 LEU B 91 LEU B 110 1 20 HELIX 14 14 ASN B 121 PHE B 129 1 9 HELIX 15 15 ARG B 155 ARG B 160 1 6 HELIX 16 16 PRO B 162 GLU B 165 5 4 HELIX 17 17 ASN C 2 ARG C 10 1 9 HELIX 18 18 GLU C 22 ALA C 36 1 15 HELIX 19 19 THR C 38 ARG C 42 5 5 HELIX 20 20 GLU C 52 ALA C 63 1 12 HELIX 21 21 LEU C 91 LEU C 110 1 20 HELIX 22 22 ASN C 121 PHE C 129 1 9 HELIX 23 23 ARG C 155 ARG C 160 1 6 HELIX 24 24 PRO C 162 GLU C 165 5 4 HELIX 25 25 ASN D 2 ARG D 10 1 9 HELIX 26 26 GLU D 22 ALA D 36 1 15 HELIX 27 27 THR D 38 ARG D 42 5 5 HELIX 28 28 GLU D 52 LYS D 61 1 10 HELIX 29 29 LEU D 91 LEU D 110 1 20 HELIX 30 30 ASN D 121 PHE D 129 1 9 HELIX 31 31 ARG D 155 ARG D 160 1 6 HELIX 32 32 PRO D 162 GLU D 165 5 4 SHEET 1 A 5 ALA A 113 VAL A 117 0 SHEET 2 A 5 LEU A 135 GLY A 144 -1 O GLY A 144 N ALA A 113 SHEET 3 A 5 LEU A 70 ASP A 77 -1 N VAL A 74 O ASN A 139 SHEET 4 A 5 GLN A 45 ILE A 50 -1 N ILE A 50 O ALA A 71 SHEET 5 A 5 VAL B 167 TYR B 169 1 O SER B 168 N VAL A 49 SHEET 1 B 5 VAL A 167 TYR A 169 0 SHEET 2 B 5 GLN B 45 ILE B 50 1 O VAL B 49 N SER A 168 SHEET 3 B 5 LEU B 70 ASP B 77 -1 O ALA B 71 N ILE B 50 SHEET 4 B 5 LEU B 135 GLY B 144 -1 O ASN B 139 N VAL B 74 SHEET 5 B 5 ALA B 113 VAL B 117 -1 N VAL B 115 O LEU B 142 SHEET 1 C 5 ALA C 113 VAL C 117 0 SHEET 2 C 5 LEU C 135 GLY C 144 -1 O ILE C 140 N VAL C 117 SHEET 3 C 5 LEU C 70 ASP C 77 -1 N VAL C 74 O ASN C 139 SHEET 4 C 5 GLN C 45 ILE C 50 -1 N ILE C 50 O ALA C 71 SHEET 5 C 5 VAL D 167 TYR D 169 1 O SER D 168 N VAL C 49 SHEET 1 D 5 VAL C 167 TYR C 169 0 SHEET 2 D 5 GLN D 45 ILE D 50 1 O VAL D 49 N SER C 168 SHEET 3 D 5 LEU D 70 ASP D 77 -1 O CYS D 75 N ARG D 46 SHEET 4 D 5 LEU D 135 GLY D 144 -1 O ASN D 139 N VAL D 74 SHEET 5 D 5 ALA D 113 VAL D 117 -1 N VAL D 117 O ILE D 140 LINK C GLY A 0 N MSE A 1 1555 1555 1.33 LINK C MSE A 1 N ASN A 2 1555 1555 1.32 LINK C HIS A 102 N MSE A 103 1555 1555 1.34 LINK C MSE A 103 N MSE A 104 1555 1555 1.33 LINK C MSE A 104 N LEU A 105 1555 1555 1.34 LINK C LEU A 142 N AMSE A 143 1555 1555 1.33 LINK C LEU A 142 N BMSE A 143 1555 1555 1.33 LINK C AMSE A 143 N GLY A 144 1555 1555 1.33 LINK C BMSE A 143 N GLY A 144 1555 1555 1.33 LINK C MSE B 1 N ASN B 2 1555 1555 1.33 LINK C HIS B 102 N MSE B 103 1555 1555 1.33 LINK C MSE B 103 N MSE B 104 1555 1555 1.33 LINK C MSE B 104 N LEU B 105 1555 1555 1.35 LINK C LEU B 142 N AMSE B 143 1555 1555 1.33 LINK C LEU B 142 N BMSE B 143 1555 1555 1.33 LINK C AMSE B 143 N GLY B 144 1555 1555 1.33 LINK C BMSE B 143 N GLY B 144 1555 1555 1.32 LINK C MSE C 1 N ASN C 2 1555 1555 1.33 LINK C HIS C 102 N MSE C 103 1555 1555 1.33 LINK C MSE C 103 N MSE C 104 1555 1555 1.34 LINK C MSE C 104 N LEU C 105 1555 1555 1.33 LINK C LEU C 142 N AMSE C 143 1555 1555 1.33 LINK C LEU C 142 N BMSE C 143 1555 1555 1.33 LINK C AMSE C 143 N GLY C 144 1555 1555 1.33 LINK C BMSE C 143 N GLY C 144 1555 1555 1.32 LINK C MSE D 1 N ASN D 2 1555 1555 1.33 LINK C HIS D 102 N MSE D 103 1555 1555 1.35 LINK C MSE D 103 N MSE D 104 1555 1555 1.33 LINK C MSE D 104 N LEU D 105 1555 1555 1.33 LINK C LEU D 142 N AMSE D 143 1555 1555 1.33 LINK C LEU D 142 N BMSE D 143 1555 1555 1.33 LINK C AMSE D 143 N GLY D 144 1555 1555 1.33 LINK C BMSE D 143 N GLY D 144 1555 1555 1.33 SITE 1 AC1 26 ARG A 10 TYR A 11 SER A 12 ARG A 14 SITE 2 AC1 26 TYR A 66 VAL A 115 TRP A 116 VAL A 117 SITE 3 AC1 26 CYS A 118 TYR A 119 ARG A 155 ARG A 160 SITE 4 AC1 26 HOH A 242 HOH A 330 HOH A 490 HOH A 636 SITE 5 AC1 26 PRO B 37 THR B 38 GLY B 39 ASN B 41 SITE 6 AC1 26 ILE B 94 ASP B 95 ILE B 98 CL B 173 SITE 7 AC1 26 LYS C 148 HOH C 284 SITE 1 AC2 5 LYS A 9 PRO A 150 HOH A 653 HOH A 680 SITE 2 AC2 5 HOH A 708 SITE 1 AC3 5 GLY A 40 TRP A 82 HOH A 881 GOL B 176 SITE 2 AC3 5 FMN B 300 SITE 1 AC4 3 ILE A 149 PRO A 150 GLU A 151 SITE 1 AC5 8 MSE A 1 ASN A 2 PHE A 3 GLU A 109 SITE 2 AC5 8 MSE B 1 PHE B 3 LEU B 6 GLU B 109 SITE 1 AC6 24 PRO A 37 THR A 38 GLY A 39 ASN A 41 SITE 2 AC6 24 ILE A 94 ASP A 95 ILE A 98 GOL A 174 SITE 3 AC6 24 ARG B 10 TYR B 11 SER B 12 ARG B 14 SITE 4 AC6 24 TYR B 66 VAL B 115 TRP B 116 VAL B 117 SITE 5 AC6 24 CYS B 118 TYR B 119 ARG B 155 ARG B 160 SITE 6 AC6 24 GOL B 176 HOH B 197 HOH B 233 HOH B 247 SITE 1 AC7 3 FMN A 300 GLY B 40 ILE C 149 SITE 1 AC8 4 ILE B 149 HOH B 779 GLY C 40 FMN D 300 SITE 1 AC9 6 PHE A 86 ALA B 62 ASN B 64 TYR B 119 SITE 2 AC9 6 HOH B 195 HOH B 229 SITE 1 BC1 6 GOL A 174 HOH A 881 ARG B 14 FMN B 300 SITE 2 BC1 6 HOH B 716 HOH B 789 SITE 1 BC2 6 TYR A 119 HOH A 434 HOH A 577 ARG B 84 SITE 2 BC2 6 PRO B 85 PHE B 86 SITE 1 BC3 22 ARG C 10 TYR C 11 SER C 12 ARG C 14 SITE 2 BC3 22 TYR C 66 VAL C 115 TRP C 116 VAL C 117 SITE 3 BC3 22 CYS C 118 TYR C 119 ARG C 155 ARG C 160 SITE 4 BC3 22 HOH C 264 HOH C 336 HOH C 709 PRO D 37 SITE 5 BC3 22 THR D 38 GLY D 39 ASN D 41 ILE D 94 SITE 6 BC3 22 ILE D 98 GOL D 175 SITE 1 BC4 6 ALA C 62 ASN C 64 TYR C 119 HOH C 311 SITE 2 BC4 6 HOH C 769 PHE D 86 SITE 1 BC5 10 LYS C 9 THR C 108 GLY C 111 LEU C 112 SITE 2 BC5 10 ALA C 113 GLU C 146 PRO C 150 HOH C 237 SITE 3 BC5 10 HOH C 371 HOH C 414 SITE 1 BC6 6 LYS C 158 THR C 159 ARG C 160 VAL C 161 SITE 2 BC6 6 ASN D 41 GLN D 43 SITE 1 BC7 26 LYS B 148 CL B 174 PRO C 37 THR C 38 SITE 2 BC7 26 GLY C 39 ASN C 41 LEU C 91 ILE C 94 SITE 3 BC7 26 ILE C 98 ARG D 10 TYR D 11 SER D 12 SITE 4 BC7 26 ARG D 14 TYR D 66 VAL D 115 TRP D 116 SITE 5 BC7 26 VAL D 117 CYS D 118 TYR D 119 ARG D 155 SITE 6 BC7 26 ARG D 160 HOH D 241 HOH D 280 HOH D 356 SITE 7 BC7 26 HOH D 365 HOH D 654 SITE 1 BC8 5 LYS D 9 PRO D 150 HOH D 341 HOH D 580 SITE 2 BC8 5 HOH D 762 SITE 1 BC9 5 MSE C 1 GLU C 109 MSE D 1 ASN D 2 SITE 2 BC9 5 GLU D 109 SITE 1 CC1 4 TYR C 119 FMN C 300 GLY D 40 TRP D 82 CRYST1 58.369 87.924 87.501 90.00 102.33 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017132 0.000000 0.003744 0.00000 SCALE2 0.000000 0.011373 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011698 0.00000