HEADER TRANSFERASE 09-DEC-09 3KZY TITLE CRYSTAL STRUCTURE OF SNAP-TAG COMPND MOL_ID: 1; COMPND 2 MOLECULE: METHYLATED-DNA--PROTEIN-CYSTEINE METHYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: SNAP-TAG; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PRSET KEYWDS PROTEIN TAG, PROTEIN ENGINEERING, BENZYLGUANINE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.BANNWARTH,S.SCHMITT,F.POJER,M.SCHILTZ,K.JOHNSSON REVDAT 3 08-NOV-23 3KZY 1 REMARK REVDAT 2 07-DEC-22 3KZY 1 COMPND SOURCE REMARK DBREF REVDAT 2 2 1 LINK REVDAT 1 15-DEC-10 3KZY 0 JRNL AUTH S.SCHMITT,B.MOLLWITZ,F.POJER,M.BANNWARTH,M.SCHILTZ, JRNL AUTH 2 K.JOHNSSON JRNL TITL SNAP-TAG STRUCTURE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.20 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 31570 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1682 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2208 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.33 REMARK 3 BIN R VALUE (WORKING SET) : 0.2990 REMARK 3 BIN FREE R VALUE SET COUNT : 122 REMARK 3 BIN FREE R VALUE : 0.3650 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2482 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 251 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.26 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.46 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.145 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.149 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.099 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.330 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.919 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2576 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3512 ; 1.548 ; 1.969 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 332 ; 5.870 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 106 ;37.884 ;24.340 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 416 ;13.812 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;17.689 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 392 ; 0.106 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1962 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1626 ; 0.942 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2606 ; 1.651 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 950 ; 2.508 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 900 ; 3.911 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3KZY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-DEC-09. REMARK 100 THE DEPOSITION ID IS D_1000056658. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-OCT-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.931 REMARK 200 MONOCHROMATOR : DIAMOND REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33201 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 79.574 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 12.40 REMARK 200 R MERGE (I) : 0.07100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 25.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.8 REMARK 200 DATA REDUNDANCY IN SHELL : 7.00 REMARK 200 R MERGE FOR SHELL (I) : 0.50500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CCP4 PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1EH6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 34% PEG 3350, 100MM BISTRIS PH 5.5, REMARK 280 500MM NACL , VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 32.41150 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 56.26750 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 56.26750 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 48.61725 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 56.26750 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 56.26750 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 16.20575 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 56.26750 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 56.26750 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 48.61725 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 56.26750 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 56.26750 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 16.20575 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 32.41150 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 PRO A -1 REMARK 465 GLY A 0 REMARK 465 SER A 1 REMARK 465 ASP A 2 REMARK 465 LYS A 3 REMARK 465 LYS A 36 REMARK 465 GLY A 37 REMARK 465 THR A 38 REMARK 465 SER A 39 REMARK 465 ALA A 40 REMARK 465 ALA A 41 REMARK 465 ASP A 42 REMARK 465 ALA A 43 REMARK 465 VAL A 44 REMARK 465 GLU A 45 REMARK 465 VAL A 46 REMARK 465 PRO A 47 REMARK 465 ALA A 48 REMARK 465 PRO A 49 REMARK 465 GLY B -2 REMARK 465 PRO B -1 REMARK 465 GLY B 0 REMARK 465 SER B 1 REMARK 465 ASP B 2 REMARK 465 LYS B 3 REMARK 465 LYS B 36 REMARK 465 GLY B 37 REMARK 465 THR B 38 REMARK 465 SER B 39 REMARK 465 ALA B 40 REMARK 465 ALA B 41 REMARK 465 ASP B 42 REMARK 465 ALA B 43 REMARK 465 VAL B 44 REMARK 465 GLU B 45 REMARK 465 VAL B 46 REMARK 465 PRO B 47 REMARK 465 ALA B 48 REMARK 465 PRO B 49 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 72 52.98 -140.93 REMARK 500 ALA A 125 -11.66 76.74 REMARK 500 ILE A 141 -60.04 65.50 REMARK 500 ALA B 126 52.00 -95.83 REMARK 500 ILE B 141 -61.70 71.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 180 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 5 SG REMARK 620 2 CYS A 24 SG 115.0 REMARK 620 3 HIS A 29 NE2 103.3 115.1 REMARK 620 4 HIS A 85 ND1 105.7 103.7 113.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 200 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 5 SG REMARK 620 2 CYS B 24 SG 119.4 REMARK 620 3 HIS B 29 NE2 113.7 107.6 REMARK 620 4 HIS B 85 ND1 100.3 99.7 115.5 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 180 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 200 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3KZZ RELATED DB: PDB REMARK 900 SNAP-TAG BOUND TO BENZYLGUANINE REMARK 900 RELATED ID: 3L00 RELATED DB: PDB REMARK 900 BENZYLATED SNAP-TAG REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SEQUENCE HAS BEEN DEPOSITED TO EMBL WITH ACCESSION NUMBER REMARK 999 FR727225. DBREF 3KZY A -2 179 UNP E5BBQ0 E5BBQ0_HUMAN 1 182 DBREF 3KZY B -2 179 UNP E5BBQ0 E5BBQ0_HUMAN 1 182 SEQRES 1 A 182 GLY PRO GLY SER ASP LYS ASP CYS GLU MET LYS ARG THR SEQRES 2 A 182 THR LEU ASP SER PRO LEU GLY LYS LEU GLU LEU SER GLY SEQRES 3 A 182 CYS GLU GLN GLY LEU HIS GLU ILE ILE PHE LEU GLY LYS SEQRES 4 A 182 GLY THR SER ALA ALA ASP ALA VAL GLU VAL PRO ALA PRO SEQRES 5 A 182 ALA ALA VAL LEU GLY GLY PRO GLU PRO LEU MET GLN ALA SEQRES 6 A 182 THR ALA TRP LEU ASN ALA TYR PHE HIS GLN PRO GLU ALA SEQRES 7 A 182 ILE GLU GLU PHE PRO VAL PRO ALA LEU HIS HIS PRO VAL SEQRES 8 A 182 PHE GLN GLN GLU SER PHE THR ARG GLN VAL LEU TRP LYS SEQRES 9 A 182 LEU LEU LYS VAL VAL LYS PHE GLY GLU VAL ILE SER TYR SEQRES 10 A 182 SER HIS LEU ALA ALA LEU ALA GLY ASN PRO ALA ALA THR SEQRES 11 A 182 ALA ALA VAL LYS THR ALA LEU SER GLY ASN PRO VAL PRO SEQRES 12 A 182 ILE LEU ILE PRO CYS HIS ARG VAL VAL GLN GLY ASP LEU SEQRES 13 A 182 ASP VAL GLY GLY TYR GLU GLY GLY LEU ALA VAL LYS GLU SEQRES 14 A 182 TRP LEU LEU ALA HIS GLU GLY HIS ARG LEU GLY LYS ARG SEQRES 1 B 182 GLY PRO GLY SER ASP LYS ASP CYS GLU MET LYS ARG THR SEQRES 2 B 182 THR LEU ASP SER PRO LEU GLY LYS LEU GLU LEU SER GLY SEQRES 3 B 182 CYS GLU GLN GLY LEU HIS GLU ILE ILE PHE LEU GLY LYS SEQRES 4 B 182 GLY THR SER ALA ALA ASP ALA VAL GLU VAL PRO ALA PRO SEQRES 5 B 182 ALA ALA VAL LEU GLY GLY PRO GLU PRO LEU MET GLN ALA SEQRES 6 B 182 THR ALA TRP LEU ASN ALA TYR PHE HIS GLN PRO GLU ALA SEQRES 7 B 182 ILE GLU GLU PHE PRO VAL PRO ALA LEU HIS HIS PRO VAL SEQRES 8 B 182 PHE GLN GLN GLU SER PHE THR ARG GLN VAL LEU TRP LYS SEQRES 9 B 182 LEU LEU LYS VAL VAL LYS PHE GLY GLU VAL ILE SER TYR SEQRES 10 B 182 SER HIS LEU ALA ALA LEU ALA GLY ASN PRO ALA ALA THR SEQRES 11 B 182 ALA ALA VAL LYS THR ALA LEU SER GLY ASN PRO VAL PRO SEQRES 12 B 182 ILE LEU ILE PRO CYS HIS ARG VAL VAL GLN GLY ASP LEU SEQRES 13 B 182 ASP VAL GLY GLY TYR GLU GLY GLY LEU ALA VAL LYS GLU SEQRES 14 B 182 TRP LEU LEU ALA HIS GLU GLY HIS ARG LEU GLY LYS ARG HET ZN A 180 1 HET ZN B 200 1 HETNAM ZN ZINC ION FORMUL 3 ZN 2(ZN 2+) FORMUL 5 HOH *251(H2 O) HELIX 1 1 GLU A 57 GLN A 72 1 16 HELIX 2 2 PRO A 73 PHE A 79 5 7 HELIX 3 3 HIS A 86 GLN A 90 5 5 HELIX 4 4 SER A 93 VAL A 106 1 14 HELIX 5 5 TYR A 114 ALA A 121 1 8 HELIX 6 6 ALA A 126 GLY A 136 1 11 HELIX 7 7 PRO A 144 HIS A 146 5 3 HELIX 8 8 GLY A 161 GLU A 172 1 12 HELIX 9 9 GLU B 57 GLN B 72 1 16 HELIX 10 10 PRO B 73 PHE B 79 5 7 HELIX 11 11 HIS B 86 GLN B 91 1 6 HELIX 12 12 SER B 93 VAL B 106 1 14 HELIX 13 13 TYR B 114 ALA B 121 1 8 HELIX 14 14 ALA B 126 GLY B 136 1 11 HELIX 15 15 PRO B 144 HIS B 146 5 3 HELIX 16 16 GLY B 161 GLU B 172 1 12 SHEET 1 A 3 LYS A 8 LEU A 12 0 SHEET 2 A 3 LYS A 18 CYS A 24 -1 O GLY A 23 N LYS A 8 SHEET 3 A 3 GLY A 27 GLY A 35 -1 O LEU A 34 N LYS A 18 SHEET 1 B 2 ILE A 112 SER A 113 0 SHEET 2 B 2 VAL A 148 VAL A 149 1 O VAL A 149 N ILE A 112 SHEET 1 C 3 MET B 7 LEU B 12 0 SHEET 2 C 3 LEU B 19 CYS B 24 -1 O LEU B 19 N LEU B 12 SHEET 3 C 3 GLY B 27 PHE B 33 -1 O HIS B 29 N SER B 22 SHEET 1 D 2 ILE B 112 SER B 113 0 SHEET 2 D 2 VAL B 148 VAL B 149 1 O VAL B 149 N ILE B 112 LINK SG CYS A 5 ZN ZN A 180 1555 1555 2.32 LINK SG CYS A 24 ZN ZN A 180 1555 1555 2.32 LINK NE2 HIS A 29 ZN ZN A 180 1555 1555 2.19 LINK ND1 HIS A 85 ZN ZN A 180 1555 1555 2.04 LINK SG CYS B 5 ZN ZN B 200 1555 1555 2.40 LINK SG CYS B 24 ZN ZN B 200 1555 1555 2.33 LINK NE2 HIS B 29 ZN ZN B 200 1555 1555 2.20 LINK ND1 HIS B 85 ZN ZN B 200 1555 1555 1.95 CISPEP 1 ALA B 50 ALA B 51 0 -12.07 SITE 1 AC1 4 CYS A 5 CYS A 24 HIS A 29 HIS A 85 SITE 1 AC2 4 CYS B 5 CYS B 24 HIS B 29 HIS B 85 CRYST1 112.535 112.535 64.823 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008886 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008886 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015427 0.00000