data_3L47 # _entry.id 3L47 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.290 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3L47 RCSB RCSB056811 WWPDB D_1000056811 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3L4A AgamOBP22a_Native unspecified PDB 3L4L AgamOBP22a_Benzaldehyde unspecified PDB 3L5G 'AgamOBP22a_ Cyclohexanone' unspecified PDB 3PJI 'AgamOBP22a at 1.7 angstrom in the open status for ligand binding' unspecified # _pdbx_database_status.entry_id 3L47 _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-12-18 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ren, H.' 1 'Zhang, S.' 2 # _citation.id primary _citation.title 'The Crystal Structures of an Anopheles gambiae Odorant-binding Protein AgamOBP22a and complexes with bound Odorants' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Ren, H.' 1 primary 'Yang, G.' 2 primary 'Winberg, G.' 3 primary 'Turin, L.' 4 primary 'Mershin, A.' 5 primary 'Zhang, S.' 6 # _cell.length_a 71.871 _cell.length_b 37.920 _cell.length_c 43.889 _cell.angle_alpha 90.000 _cell.angle_beta 98.920 _cell.angle_gamma 90.000 _cell.entry_id 3L47 _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.entry_id 3L47 _symmetry.Int_Tables_number 5 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Odorant binding protein (AGAP010409-PA)' 16043.329 1 ? ? 'AgamOBP22a, UNP residues 22-144' ? 2 non-polymer syn 'GOLD ION' 196.967 2 ? ? ? ? 3 water nat water 18.015 39 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Odorant-binding protein OBPjj83b' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ADNNESVIESCSNAVQGAANDELKVHYRANEFPDDPVTHCFVRCIGLELNLYDDKYGVDLQANWENLGNSDDADEEFVAK HRACLEAKNLETIEDLCERAYSAFQCLREDYEMYQNNNNATSELVPRGSSGELWSHPQFEK ; _entity_poly.pdbx_seq_one_letter_code_can ;ADNNESVIESCSNAVQGAANDELKVHYRANEFPDDPVTHCFVRCIGLELNLYDDKYGVDLQANWENLGNSDDADEEFVAK HRACLEAKNLETIEDLCERAYSAFQCLREDYEMYQNNNNATSELVPRGSSGELWSHPQFEK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 ASP n 1 3 ASN n 1 4 ASN n 1 5 GLU n 1 6 SER n 1 7 VAL n 1 8 ILE n 1 9 GLU n 1 10 SER n 1 11 CYS n 1 12 SER n 1 13 ASN n 1 14 ALA n 1 15 VAL n 1 16 GLN n 1 17 GLY n 1 18 ALA n 1 19 ALA n 1 20 ASN n 1 21 ASP n 1 22 GLU n 1 23 LEU n 1 24 LYS n 1 25 VAL n 1 26 HIS n 1 27 TYR n 1 28 ARG n 1 29 ALA n 1 30 ASN n 1 31 GLU n 1 32 PHE n 1 33 PRO n 1 34 ASP n 1 35 ASP n 1 36 PRO n 1 37 VAL n 1 38 THR n 1 39 HIS n 1 40 CYS n 1 41 PHE n 1 42 VAL n 1 43 ARG n 1 44 CYS n 1 45 ILE n 1 46 GLY n 1 47 LEU n 1 48 GLU n 1 49 LEU n 1 50 ASN n 1 51 LEU n 1 52 TYR n 1 53 ASP n 1 54 ASP n 1 55 LYS n 1 56 TYR n 1 57 GLY n 1 58 VAL n 1 59 ASP n 1 60 LEU n 1 61 GLN n 1 62 ALA n 1 63 ASN n 1 64 TRP n 1 65 GLU n 1 66 ASN n 1 67 LEU n 1 68 GLY n 1 69 ASN n 1 70 SER n 1 71 ASP n 1 72 ASP n 1 73 ALA n 1 74 ASP n 1 75 GLU n 1 76 GLU n 1 77 PHE n 1 78 VAL n 1 79 ALA n 1 80 LYS n 1 81 HIS n 1 82 ARG n 1 83 ALA n 1 84 CYS n 1 85 LEU n 1 86 GLU n 1 87 ALA n 1 88 LYS n 1 89 ASN n 1 90 LEU n 1 91 GLU n 1 92 THR n 1 93 ILE n 1 94 GLU n 1 95 ASP n 1 96 LEU n 1 97 CYS n 1 98 GLU n 1 99 ARG n 1 100 ALA n 1 101 TYR n 1 102 SER n 1 103 ALA n 1 104 PHE n 1 105 GLN n 1 106 CYS n 1 107 LEU n 1 108 ARG n 1 109 GLU n 1 110 ASP n 1 111 TYR n 1 112 GLU n 1 113 MET n 1 114 TYR n 1 115 GLN n 1 116 ASN n 1 117 ASN n 1 118 ASN n 1 119 ASN n 1 120 ALA n 1 121 THR n 1 122 SER n 1 123 GLU n 1 124 LEU n 1 125 VAL n 1 126 PRO n 1 127 ARG n 1 128 GLY n 1 129 SER n 1 130 SER n 1 131 GLY n 1 132 GLU n 1 133 LEU n 1 134 TRP n 1 135 SER n 1 136 HIS n 1 137 PRO n 1 138 GLN n 1 139 PHE n 1 140 GLU n 1 141 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'African malaria mosquito' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'AgamOBP22a, AGAP010409, OBP22, OBPjj83b' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain PEST _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Anopheles gambiae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 180454 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)-STAR-pLysS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q7PGA3_ANOGA _struct_ref.pdbx_db_accession Q7PGA3 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ADNNESVIESCSNAVQGAANDELKVHYRANEFPDDPVTHCFVRCIGLELNLYDDKYGVDLQANWENLGNSDDADEEFVAK HRACLEAKNLETIEDLCERAYSAFQCLREDYEMYQNNNNATSE ; _struct_ref.pdbx_align_begin 22 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3L47 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 123 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q7PGA3 _struct_ref_seq.db_align_beg 22 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 144 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 22 _struct_ref_seq.pdbx_auth_seq_align_end 144 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3L47 LEU A 124 ? UNP Q7PGA3 ? ? 'EXPRESSION TAG' 145 1 1 3L47 VAL A 125 ? UNP Q7PGA3 ? ? 'EXPRESSION TAG' 146 2 1 3L47 PRO A 126 ? UNP Q7PGA3 ? ? 'EXPRESSION TAG' 147 3 1 3L47 ARG A 127 ? UNP Q7PGA3 ? ? 'EXPRESSION TAG' 148 4 1 3L47 GLY A 128 ? UNP Q7PGA3 ? ? 'EXPRESSION TAG' 149 5 1 3L47 SER A 129 ? UNP Q7PGA3 ? ? 'EXPRESSION TAG' 150 6 1 3L47 SER A 130 ? UNP Q7PGA3 ? ? 'EXPRESSION TAG' 151 7 1 3L47 GLY A 131 ? UNP Q7PGA3 ? ? 'EXPRESSION TAG' 152 8 1 3L47 GLU A 132 ? UNP Q7PGA3 ? ? 'EXPRESSION TAG' 153 9 1 3L47 LEU A 133 ? UNP Q7PGA3 ? ? 'EXPRESSION TAG' 154 10 1 3L47 TRP A 134 ? UNP Q7PGA3 ? ? 'EXPRESSION TAG' 155 11 1 3L47 SER A 135 ? UNP Q7PGA3 ? ? 'EXPRESSION TAG' 156 12 1 3L47 HIS A 136 ? UNP Q7PGA3 ? ? 'EXPRESSION TAG' 157 13 1 3L47 PRO A 137 ? UNP Q7PGA3 ? ? 'EXPRESSION TAG' 158 14 1 3L47 GLN A 138 ? UNP Q7PGA3 ? ? 'EXPRESSION TAG' 159 15 1 3L47 PHE A 139 ? UNP Q7PGA3 ? ? 'EXPRESSION TAG' 160 16 1 3L47 GLU A 140 ? UNP Q7PGA3 ? ? 'EXPRESSION TAG' 161 17 1 3L47 LYS A 141 ? UNP Q7PGA3 ? ? 'EXPRESSION TAG' 162 18 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 AU non-polymer . 'GOLD ION' ? 'Au 1' 196.967 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3L47 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 1.84 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 33.2 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.pdbx_details 'Ammonium citrate tribasic, MPD, pH 7.0, vapor diffusion, hanging drop, temperature 298K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RIGAKU SATURN 944' _diffrn_detector.pdbx_collection_date 2009-06-18 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type RIGAKU _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 3L47 _reflns.d_resolution_high 2.500 _reflns.d_resolution_low 30.000 _reflns.number_obs 4107 _reflns.pdbx_Rmerge_I_obs 0.064 _reflns.pdbx_netI_over_sigmaI 32.200 _reflns.pdbx_chi_squared 4.192 _reflns.pdbx_redundancy 6.200 _reflns.percent_possible_obs 99.800 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I -3 _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal 2.50 2.54 ? ? ? 0.140 ? ? 2.538 6.10 ? 209 99.50 ? 1 2.54 2.59 ? ? ? 0.125 ? ? 3.000 6.00 ? 196 100.00 ? 2 2.59 2.64 ? ? ? 0.108 ? ? 2.712 6.00 ? 205 100.00 ? 3 2.64 2.69 ? ? ? 0.111 ? ? 3.004 6.20 ? 203 100.00 ? 4 2.69 2.75 ? ? ? 0.105 ? ? 2.969 6.00 ? 205 100.00 ? 5 2.75 2.82 ? ? ? 0.089 ? ? 3.044 6.20 ? 188 100.00 ? 6 2.82 2.89 ? ? ? 0.092 ? ? 3.145 6.30 ? 223 100.00 ? 7 2.89 2.96 ? ? ? 0.090 ? ? 3.376 6.20 ? 188 100.00 ? 8 2.96 3.05 ? ? ? 0.082 ? ? 3.552 6.20 ? 211 100.00 ? 9 3.05 3.15 ? ? ? 0.073 ? ? 3.237 6.30 ? 200 99.50 ? 10 3.15 3.26 ? ? ? 0.071 ? ? 4.218 6.10 ? 206 100.00 ? 11 3.26 3.39 ? ? ? 0.064 ? ? 4.066 6.30 ? 211 99.50 ? 12 3.39 3.55 ? ? ? 0.064 ? ? 4.398 6.40 ? 192 100.00 ? 13 3.55 3.73 ? ? ? 0.053 ? ? 3.993 6.20 ? 218 99.50 ? 14 3.73 3.97 ? ? ? 0.055 ? ? 4.547 6.30 ? 204 99.50 ? 15 3.97 4.27 ? ? ? 0.049 ? ? 4.488 6.30 ? 198 99.00 ? 16 4.27 4.70 ? ? ? 0.050 ? ? 5.190 6.10 ? 202 99.50 ? 17 4.70 5.38 ? ? ? 0.051 ? ? 5.392 6.20 ? 212 99.50 ? 18 5.38 6.76 ? ? ? 0.061 ? ? 7.536 6.20 ? 214 99.50 ? 19 6.76 30.00 ? ? ? 0.052 ? ? 9.180 5.70 ? 222 100.00 ? 20 # _refine.entry_id 3L47 _refine.ls_d_res_high 2.506 _refine.ls_d_res_low 29.828 _refine.pdbx_ls_sigma_F 0.15 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 98.570 _refine.ls_number_reflns_obs 4069 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details ? _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.185 _refine.ls_R_factor_R_work 0.180 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.226 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 10.030 _refine.ls_number_reflns_R_free 408 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 24.832 _refine.solvent_model_param_bsol 32.636 _refine.solvent_model_param_ksol 0.352 _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -0.466 _refine.aniso_B[2][2] -1.114 _refine.aniso_B[3][3] 1.398 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 3.583 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 2.110 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.110 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.900 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 61.74 _refine.B_iso_min 14.96 _refine.occupancy_max 1.00 _refine.occupancy_min 0.56 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 873 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 39 _refine_hist.number_atoms_total 914 _refine_hist.d_res_high 2.506 _refine_hist.d_res_low 29.828 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 892 0.010 ? ? 'X-RAY DIFFRACTION' ? f_angle_d 1204 1.156 ? ? 'X-RAY DIFFRACTION' ? f_chiral_restr 127 0.081 ? ? 'X-RAY DIFFRACTION' ? f_plane_restr 164 0.004 ? ? 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 318 23.034 ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 2.506 2.868 3 97.000 1197 . 0.195 0.264 . 133 . 1330 1393 . 'X-RAY DIFFRACTION' 2.868 3.613 3 99.000 1211 . 0.173 0.216 . 135 . 1346 1346 . 'X-RAY DIFFRACTION' 3.613 29.830 3 99.000 1253 . 0.176 0.213 . 140 . 1393 1330 . 'X-RAY DIFFRACTION' # _struct.entry_id 3L47 _struct.title 'Crystal Structure of the Anopheles gambiae Odorant-binding Protein 22a' _struct.pdbx_descriptor 'Odorant binding protein (AGAP010409-PA)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3L47 _struct_keywords.text 'all alpha helix, TRANSPORT PROTEIN' _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 6 ? VAL A 15 ? SER A 27 VAL A 36 1 ? 10 HELX_P HELX_P2 2 ASN A 20 ? ALA A 29 ? ASN A 41 ALA A 50 1 ? 10 HELX_P HELX_P3 3 ASP A 35 ? LEU A 49 ? ASP A 56 LEU A 70 1 ? 15 HELX_P HELX_P4 4 ASP A 59 ? LEU A 67 ? ASP A 80 LEU A 88 1 ? 9 HELX_P HELX_P5 5 ASP A 74 ? LYS A 88 ? ASP A 95 LYS A 109 1 ? 15 HELX_P HELX_P6 6 ASN A 89 ? ILE A 93 ? ASN A 110 ILE A 114 5 ? 5 HELX_P HELX_P7 7 ASP A 95 ? GLN A 105 ? ASP A 116 GLN A 126 1 ? 11 HELX_P HELX_P8 8 LEU A 107 ? MET A 113 ? LEU A 128 MET A 134 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 11 SG ? ? ? 1_555 A CYS 44 SG ? ? A CYS 32 A CYS 65 1_555 ? ? ? ? ? ? ? 2.036 ? disulf2 disulf ? ? A CYS 40 SG ? ? ? 1_555 A CYS 97 SG ? ? A CYS 61 A CYS 118 1_555 ? ? ? ? ? ? ? 2.041 ? disulf3 disulf ? ? A CYS 84 SG ? ? ? 1_555 A CYS 106 SG ? ? A CYS 105 A CYS 127 1_555 ? ? ? ? ? ? ? 2.021 ? metalc1 metalc ? ? A HIS 39 ND1 ? ? ? 1_555 B AU . AU ? ? A HIS 60 A AU 1 1_555 ? ? ? ? ? ? ? 2.197 ? metalc2 metalc ? ? A HIS 26 NE2 ? ? ? 1_555 C AU . AU ? ? A HIS 47 A AU 2 1_555 ? ? ? ? ? ? ? 2.404 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id A _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 52 ? ASP A 53 ? TYR A 73 ASP A 74 A 2 GLY A 57 ? VAL A 58 ? GLY A 78 VAL A 79 # _pdbx_struct_sheet_hbond.sheet_id A _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id ASP _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 53 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id ASP _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 74 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id GLY _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 57 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id GLY _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 78 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE AU A 1' AC2 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE AU A 2' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 PRO A 36 ? PRO A 57 . ? 1_555 ? 2 AC1 2 HIS A 39 ? HIS A 60 . ? 1_555 ? 3 AC2 1 HIS A 26 ? HIS A 47 . ? 1_555 ? # _atom_sites.entry_id 3L47 _atom_sites.fract_transf_matrix[1][1] 0.013914 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002183 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.026371 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.023063 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol AU C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 22 ? ? ? A . n A 1 2 ASP 2 23 ? ? ? A . n A 1 3 ASN 3 24 ? ? ? A . n A 1 4 ASN 4 25 ? ? ? A . n A 1 5 GLU 5 26 ? ? ? A . n A 1 6 SER 6 27 27 SER SER A . n A 1 7 VAL 7 28 28 VAL VAL A . n A 1 8 ILE 8 29 29 ILE ILE A . n A 1 9 GLU 9 30 30 GLU GLU A . n A 1 10 SER 10 31 31 SER SER A . n A 1 11 CYS 11 32 32 CYS CYS A . n A 1 12 SER 12 33 33 SER SER A . n A 1 13 ASN 13 34 34 ASN ASN A . n A 1 14 ALA 14 35 35 ALA ALA A . n A 1 15 VAL 15 36 36 VAL VAL A . n A 1 16 GLN 16 37 37 GLN GLN A . n A 1 17 GLY 17 38 38 GLY GLY A . n A 1 18 ALA 18 39 39 ALA ALA A . n A 1 19 ALA 19 40 40 ALA ALA A . n A 1 20 ASN 20 41 41 ASN ASN A . n A 1 21 ASP 21 42 42 ASP ASP A . n A 1 22 GLU 22 43 43 GLU GLU A . n A 1 23 LEU 23 44 44 LEU LEU A . n A 1 24 LYS 24 45 45 LYS LYS A . n A 1 25 VAL 25 46 46 VAL VAL A . n A 1 26 HIS 26 47 47 HIS HIS A . n A 1 27 TYR 27 48 48 TYR TYR A . n A 1 28 ARG 28 49 49 ARG ARG A . n A 1 29 ALA 29 50 50 ALA ALA A . n A 1 30 ASN 30 51 51 ASN ASN A . n A 1 31 GLU 31 52 52 GLU GLU A . n A 1 32 PHE 32 53 53 PHE PHE A . n A 1 33 PRO 33 54 54 PRO PRO A . n A 1 34 ASP 34 55 55 ASP ASP A . n A 1 35 ASP 35 56 56 ASP ASP A . n A 1 36 PRO 36 57 57 PRO PRO A . n A 1 37 VAL 37 58 58 VAL VAL A . n A 1 38 THR 38 59 59 THR THR A . n A 1 39 HIS 39 60 60 HIS HIS A . n A 1 40 CYS 40 61 61 CYS CYS A . n A 1 41 PHE 41 62 62 PHE PHE A . n A 1 42 VAL 42 63 63 VAL VAL A . n A 1 43 ARG 43 64 64 ARG ARG A . n A 1 44 CYS 44 65 65 CYS CYS A . n A 1 45 ILE 45 66 66 ILE ILE A . n A 1 46 GLY 46 67 67 GLY GLY A . n A 1 47 LEU 47 68 68 LEU LEU A . n A 1 48 GLU 48 69 69 GLU GLU A . n A 1 49 LEU 49 70 70 LEU LEU A . n A 1 50 ASN 50 71 71 ASN ASN A . n A 1 51 LEU 51 72 72 LEU LEU A . n A 1 52 TYR 52 73 73 TYR TYR A . n A 1 53 ASP 53 74 74 ASP ASP A . n A 1 54 ASP 54 75 75 ASP ASP A . n A 1 55 LYS 55 76 76 LYS LYS A . n A 1 56 TYR 56 77 77 TYR TYR A . n A 1 57 GLY 57 78 78 GLY GLY A . n A 1 58 VAL 58 79 79 VAL VAL A . n A 1 59 ASP 59 80 80 ASP ASP A . n A 1 60 LEU 60 81 81 LEU LEU A . n A 1 61 GLN 61 82 82 GLN GLN A . n A 1 62 ALA 62 83 83 ALA ALA A . n A 1 63 ASN 63 84 84 ASN ASN A . n A 1 64 TRP 64 85 85 TRP TRP A . n A 1 65 GLU 65 86 86 GLU GLU A . n A 1 66 ASN 66 87 87 ASN ASN A . n A 1 67 LEU 67 88 88 LEU LEU A . n A 1 68 GLY 68 89 89 GLY GLY A . n A 1 69 ASN 69 90 90 ASN ASN A . n A 1 70 SER 70 91 91 SER SER A . n A 1 71 ASP 71 92 92 ASP ASP A . n A 1 72 ASP 72 93 93 ASP ASP A . n A 1 73 ALA 73 94 94 ALA ALA A . n A 1 74 ASP 74 95 95 ASP ASP A . n A 1 75 GLU 75 96 96 GLU GLU A . n A 1 76 GLU 76 97 97 GLU GLU A . n A 1 77 PHE 77 98 98 PHE PHE A . n A 1 78 VAL 78 99 99 VAL VAL A . n A 1 79 ALA 79 100 100 ALA ALA A . n A 1 80 LYS 80 101 101 LYS LYS A . n A 1 81 HIS 81 102 102 HIS HIS A . n A 1 82 ARG 82 103 103 ARG ARG A . n A 1 83 ALA 83 104 104 ALA ALA A . n A 1 84 CYS 84 105 105 CYS CYS A . n A 1 85 LEU 85 106 106 LEU LEU A . n A 1 86 GLU 86 107 107 GLU GLU A . n A 1 87 ALA 87 108 108 ALA ALA A . n A 1 88 LYS 88 109 109 LYS LYS A . n A 1 89 ASN 89 110 110 ASN ASN A . n A 1 90 LEU 90 111 111 LEU LEU A . n A 1 91 GLU 91 112 112 GLU GLU A . n A 1 92 THR 92 113 113 THR THR A . n A 1 93 ILE 93 114 114 ILE ILE A . n A 1 94 GLU 94 115 115 GLU GLU A . n A 1 95 ASP 95 116 116 ASP ASP A . n A 1 96 LEU 96 117 117 LEU LEU A . n A 1 97 CYS 97 118 118 CYS CYS A . n A 1 98 GLU 98 119 119 GLU GLU A . n A 1 99 ARG 99 120 120 ARG ARG A . n A 1 100 ALA 100 121 121 ALA ALA A . n A 1 101 TYR 101 122 122 TYR TYR A . n A 1 102 SER 102 123 123 SER SER A . n A 1 103 ALA 103 124 124 ALA ALA A . n A 1 104 PHE 104 125 125 PHE PHE A . n A 1 105 GLN 105 126 126 GLN GLN A . n A 1 106 CYS 106 127 127 CYS CYS A . n A 1 107 LEU 107 128 128 LEU LEU A . n A 1 108 ARG 108 129 129 ARG ARG A . n A 1 109 GLU 109 130 130 GLU GLU A . n A 1 110 ASP 110 131 131 ASP ASP A . n A 1 111 TYR 111 132 132 TYR TYR A . n A 1 112 GLU 112 133 133 GLU GLU A . n A 1 113 MET 113 134 134 MET MET A . n A 1 114 TYR 114 135 135 TYR TYR A . n A 1 115 GLN 115 136 ? ? ? A . n A 1 116 ASN 116 137 ? ? ? A . n A 1 117 ASN 117 138 ? ? ? A . n A 1 118 ASN 118 139 ? ? ? A . n A 1 119 ASN 119 140 ? ? ? A . n A 1 120 ALA 120 141 ? ? ? A . n A 1 121 THR 121 142 ? ? ? A . n A 1 122 SER 122 143 ? ? ? A . n A 1 123 GLU 123 144 ? ? ? A . n A 1 124 LEU 124 145 ? ? ? A . n A 1 125 VAL 125 146 ? ? ? A . n A 1 126 PRO 126 147 ? ? ? A . n A 1 127 ARG 127 148 ? ? ? A . n A 1 128 GLY 128 149 ? ? ? A . n A 1 129 SER 129 150 ? ? ? A . n A 1 130 SER 130 151 ? ? ? A . n A 1 131 GLY 131 152 ? ? ? A . n A 1 132 GLU 132 153 ? ? ? A . n A 1 133 LEU 133 154 ? ? ? A . n A 1 134 TRP 134 155 ? ? ? A . n A 1 135 SER 135 156 ? ? ? A . n A 1 136 HIS 136 157 ? ? ? A . n A 1 137 PRO 137 158 ? ? ? A . n A 1 138 GLN 138 159 ? ? ? A . n A 1 139 PHE 139 160 ? ? ? A . n A 1 140 GLU 140 161 ? ? ? A . n A 1 141 LYS 141 162 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AU 1 1 1 AU AU A . C 2 AU 1 2 2 AU AU A . D 3 HOH 1 3 3 HOH HOH A . D 3 HOH 2 4 4 HOH HOH A . D 3 HOH 3 5 5 HOH HOH A . D 3 HOH 4 6 6 HOH HOH A . D 3 HOH 5 7 7 HOH HOH A . D 3 HOH 6 8 8 HOH HOH A . D 3 HOH 7 9 9 HOH HOH A . D 3 HOH 8 10 10 HOH HOH A . D 3 HOH 9 11 11 HOH HOH A . D 3 HOH 10 12 12 HOH HOH A . D 3 HOH 11 13 13 HOH HOH A . D 3 HOH 12 14 14 HOH HOH A . D 3 HOH 13 15 15 HOH HOH A . D 3 HOH 14 16 16 HOH HOH A . D 3 HOH 15 17 17 HOH HOH A . D 3 HOH 16 18 18 HOH HOH A . D 3 HOH 17 19 19 HOH HOH A . D 3 HOH 18 20 20 HOH HOH A . D 3 HOH 19 21 21 HOH HOH A . D 3 HOH 20 163 22 HOH HOH A . D 3 HOH 21 164 23 HOH HOH A . D 3 HOH 22 165 24 HOH HOH A . D 3 HOH 23 166 25 HOH HOH A . D 3 HOH 24 167 26 HOH HOH A . D 3 HOH 25 168 1 HOH HOH A . D 3 HOH 26 169 2 HOH HOH A . D 3 HOH 27 170 27 HOH HOH A . D 3 HOH 28 171 28 HOH HOH A . D 3 HOH 29 172 29 HOH HOH A . D 3 HOH 30 173 30 HOH HOH A . D 3 HOH 31 174 31 HOH HOH A . D 3 HOH 32 175 32 HOH HOH A . D 3 HOH 33 176 33 HOH HOH A . D 3 HOH 34 177 34 HOH HOH A . D 3 HOH 35 178 35 HOH HOH A . D 3 HOH 36 179 36 HOH HOH A . D 3 HOH 37 180 37 HOH HOH A . D 3 HOH 38 181 38 HOH HOH A . D 3 HOH 39 182 39 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 174 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-01-12 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2011-11-16 4 'Structure model' 1 3 2017-11-01 5 'Structure model' 1 4 2018-03-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Atomic model' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' diffrn_source # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 5 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_diffrn_source.source' # _pdbx_phasing_dm.entry_id 3L47 _pdbx_phasing_dm.fom_acentric 0.770 _pdbx_phasing_dm.fom_centric 0.550 _pdbx_phasing_dm.fom 0.750 _pdbx_phasing_dm.reflns_acentric 3717 _pdbx_phasing_dm.reflns_centric 379 _pdbx_phasing_dm.reflns 4096 # loop_ _pdbx_phasing_dm_shell.d_res_high _pdbx_phasing_dm_shell.d_res_low _pdbx_phasing_dm_shell.delta_phi_final _pdbx_phasing_dm_shell.delta_phi_initial _pdbx_phasing_dm_shell.fom_acentric _pdbx_phasing_dm_shell.fom_centric _pdbx_phasing_dm_shell.fom _pdbx_phasing_dm_shell.reflns_acentric _pdbx_phasing_dm_shell.reflns_centric _pdbx_phasing_dm_shell.reflns 7.200 29.828 ? ? 0.880 0.780 0.860 144 45 189 4.500 7.200 ? ? 0.890 0.670 0.860 483 75 558 3.600 4.500 ? ? 0.880 0.590 0.850 632 66 698 3.100 3.600 ? ? 0.820 0.430 0.790 622 57 679 2.700 3.100 ? ? 0.710 0.480 0.690 1143 92 1235 2.500 2.700 ? ? 0.630 0.420 0.620 693 44 737 # _phasing.method SAD # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 RESOLVE 2.13 23-Aug-2008 program 'Thomas C. Terwilliger' terwilliger@lanl.gov phasing http://www.solve.lanl.gov/ ? ? 4 PHENIX . ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 5 PDB_EXTRACT 3.005 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 CrystalClear . ? ? ? ? 'data collection' ? ? ? 7 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 8 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? 9 PHENIX . ? ? ? ? phasing ? ? ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 110 ? ? 39.54 61.82 2 1 MET A 134 ? ? -77.52 20.16 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 22 ? A ALA 1 2 1 Y 1 A ASP 23 ? A ASP 2 3 1 Y 1 A ASN 24 ? A ASN 3 4 1 Y 1 A ASN 25 ? A ASN 4 5 1 Y 1 A GLU 26 ? A GLU 5 6 1 Y 1 A GLN 136 ? A GLN 115 7 1 Y 1 A ASN 137 ? A ASN 116 8 1 Y 1 A ASN 138 ? A ASN 117 9 1 Y 1 A ASN 139 ? A ASN 118 10 1 Y 1 A ASN 140 ? A ASN 119 11 1 Y 1 A ALA 141 ? A ALA 120 12 1 Y 1 A THR 142 ? A THR 121 13 1 Y 1 A SER 143 ? A SER 122 14 1 Y 1 A GLU 144 ? A GLU 123 15 1 Y 1 A LEU 145 ? A LEU 124 16 1 Y 1 A VAL 146 ? A VAL 125 17 1 Y 1 A PRO 147 ? A PRO 126 18 1 Y 1 A ARG 148 ? A ARG 127 19 1 Y 1 A GLY 149 ? A GLY 128 20 1 Y 1 A SER 150 ? A SER 129 21 1 Y 1 A SER 151 ? A SER 130 22 1 Y 1 A GLY 152 ? A GLY 131 23 1 Y 1 A GLU 153 ? A GLU 132 24 1 Y 1 A LEU 154 ? A LEU 133 25 1 Y 1 A TRP 155 ? A TRP 134 26 1 Y 1 A SER 156 ? A SER 135 27 1 Y 1 A HIS 157 ? A HIS 136 28 1 Y 1 A PRO 158 ? A PRO 137 29 1 Y 1 A GLN 159 ? A GLN 138 30 1 Y 1 A PHE 160 ? A PHE 139 31 1 Y 1 A GLU 161 ? A GLU 140 32 1 Y 1 A LYS 162 ? A LYS 141 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'GOLD ION' AU 3 water HOH #