HEADER IMMUNE SYSTEM 21-DEC-09 3L5H TITLE CRYSTAL STRUCTURE OF THE FULL ECTODOMAIN OF HUMAN GP130: NEW INSIGHTS TITLE 2 INTO THE MOLECULAR ASSEMBLY OF RECEPTOR COMPLEXES CAVEAT 3L5H NAG C 1 HAS WRONG CHIRALITY AT ATOM C1 NAG D 1 HAS WRONG CAVEAT 2 3L5H CHIRALITY AT ATOM C1 NAG E 1 HAS WRONG CHIRALITY AT ATOM C1 CAVEAT 3 3L5H NAG H 1 HAS WRONG CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTERLEUKIN-6 RECEPTOR SUBUNIT BETA; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ECOTODOMAIN; COMPND 5 SYNONYM: IL-6R-BETA, INTERLEUKIN-6 SIGNAL TRANSDUCER, MEMBRANE COMPND 6 GLYCOPROTEIN 130, GP130, CDW130, ONCOSTATIN-M RECEPTOR SUBUNIT ALPHA; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: IL6ST; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: SF21; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS KEYWDS IG-LIKE, FNIII, CELL MEMBRANE, DISULFIDE BOND, GLYCOPROTEIN, KEYWDS 2 IMMUNOGLOBULIN DOMAIN, MEMBRANE, PHOSPHOPROTEIN, RECEPTOR, SECRETED, KEYWDS 3 TRANSMEMBRANE, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR Y.XU,T.P.J.GARRETT,J.G.ZHANG REVDAT 5 06-NOV-24 3L5H 1 REMARK HETSYN REVDAT 4 29-JUL-20 3L5H 1 CAVEAT COMPND REMARK HET REVDAT 4 2 1 HETNAM FORMUL LINK SITE REVDAT 4 3 1 ATOM REVDAT 3 05-APR-17 3L5H 1 JRNL REVDAT 2 13-JUL-11 3L5H 1 VERSN REVDAT 1 19-MAY-10 3L5H 0 JRNL AUTH Y.XU,N.J.KERSHAW,C.S.LUO,P.SOO,M.J.POCOCK,P.E.CZABOTAR, JRNL AUTH 2 D.J.HILTON,N.A.NICOLA,T.P.GARRETT,J.G.ZHANG JRNL TITL CRYSTAL STRUCTURE OF THE ENTIRE ECTODOMAIN OF GP130: JRNL TITL 2 INSIGHTS INTO THE MOLECULAR ASSEMBLY OF THE TALL CYTOKINE JRNL TITL 3 RECEPTOR COMPLEXES. JRNL REF J.BIOL.CHEM. V. 285 21214 2010 JRNL REFN ISSN 0021-9258 JRNL PMID 20489211 JRNL DOI 10.1074/JBC.C110.129502 REMARK 2 REMARK 2 RESOLUTION. 3.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0066 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.43 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 16833 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.267 REMARK 3 R VALUE (WORKING SET) : 0.263 REMARK 3 FREE R VALUE : 0.335 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 905 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.69 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1236 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.24 REMARK 3 BIN R VALUE (WORKING SET) : 0.4100 REMARK 3 BIN FREE R VALUE SET COUNT : 72 REMARK 3 BIN FREE R VALUE : 0.3760 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4439 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 262 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 93.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.55000 REMARK 3 B22 (A**2) : 1.29000 REMARK 3 B33 (A**2) : 0.58000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.76000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.648 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.331 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 45.179 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.875 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.807 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4829 ; 0.018 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6656 ; 2.236 ; 1.995 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 580 ;10.347 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 188 ;42.276 ;24.681 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 646 ;25.458 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;18.823 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 816 ; 0.139 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3580 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2931 ; 0.496 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4736 ; 0.977 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1898 ; 1.443 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1920 ; 2.581 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 102 REMARK 3 ORIGIN FOR THE GROUP (A): 8.9717 -19.0065 1.4843 REMARK 3 T TENSOR REMARK 3 T11: 0.8826 T22: 0.4496 REMARK 3 T33: 0.6390 T12: 0.0429 REMARK 3 T13: -0.0088 T23: 0.0934 REMARK 3 L TENSOR REMARK 3 L11: 3.5425 L22: 2.0984 REMARK 3 L33: 4.9553 L12: 1.9978 REMARK 3 L13: 1.2400 L23: 0.6084 REMARK 3 S TENSOR REMARK 3 S11: 0.5856 S12: 0.4710 S13: 0.0245 REMARK 3 S21: 0.1981 S22: -0.0614 S23: -0.6371 REMARK 3 S31: 0.3517 S32: -0.1180 S33: -0.5242 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 103 A 196 REMARK 3 ORIGIN FOR THE GROUP (A): 29.6278 -17.3581 39.3990 REMARK 3 T TENSOR REMARK 3 T11: 0.4162 T22: 0.0842 REMARK 3 T33: 0.1439 T12: -0.0906 REMARK 3 T13: -0.1313 T23: 0.0199 REMARK 3 L TENSOR REMARK 3 L11: 3.0201 L22: 3.3947 REMARK 3 L33: 9.5863 L12: -0.7928 REMARK 3 L13: 0.1034 L23: 1.3712 REMARK 3 S TENSOR REMARK 3 S11: -0.3451 S12: 0.4912 S13: 0.1164 REMARK 3 S21: -0.9681 S22: -0.0475 S23: 0.4483 REMARK 3 S31: -0.3102 S32: -0.0290 S33: 0.3926 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 197 A 302 REMARK 3 ORIGIN FOR THE GROUP (A): 23.6972 -12.9141 73.5854 REMARK 3 T TENSOR REMARK 3 T11: 0.0673 T22: 0.0664 REMARK 3 T33: 0.0422 T12: 0.0314 REMARK 3 T13: 0.0401 T23: 0.0487 REMARK 3 L TENSOR REMARK 3 L11: 3.7775 L22: 1.2010 REMARK 3 L33: 9.4708 L12: -1.7517 REMARK 3 L13: -4.9243 L23: 1.8015 REMARK 3 S TENSOR REMARK 3 S11: 0.0252 S12: -0.2309 S13: -0.1577 REMARK 3 S21: 0.0364 S22: 0.0172 S23: 0.0435 REMARK 3 S31: -0.4812 S32: 0.1311 S33: -0.0425 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 303 A 397 REMARK 3 ORIGIN FOR THE GROUP (A): 0.4912 -2.4352 111.2729 REMARK 3 T TENSOR REMARK 3 T11: 0.2270 T22: 0.1335 REMARK 3 T33: 0.1305 T12: -0.0111 REMARK 3 T13: 0.1040 T23: 0.0714 REMARK 3 L TENSOR REMARK 3 L11: 7.8626 L22: 7.0920 REMARK 3 L33: 6.7990 L12: -3.7547 REMARK 3 L13: -1.1431 L23: 2.5322 REMARK 3 S TENSOR REMARK 3 S11: -0.1311 S12: -0.3648 S13: -0.6154 REMARK 3 S21: 1.0753 S22: 0.0836 S23: 0.5907 REMARK 3 S31: 0.5564 S32: -0.6604 S33: 0.0475 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 398 A 493 REMARK 3 ORIGIN FOR THE GROUP (A): -6.7893 14.3141 99.2546 REMARK 3 T TENSOR REMARK 3 T11: 0.0655 T22: 0.0198 REMARK 3 T33: 0.1859 T12: 0.0292 REMARK 3 T13: -0.0068 T23: -0.0196 REMARK 3 L TENSOR REMARK 3 L11: 3.5235 L22: 2.2112 REMARK 3 L33: 8.9352 L12: 0.2425 REMARK 3 L13: 1.8877 L23: -3.1804 REMARK 3 S TENSOR REMARK 3 S11: -0.3560 S12: -0.1962 S13: 0.5776 REMARK 3 S21: 0.0535 S22: -0.0961 S23: 0.2416 REMARK 3 S31: -0.0380 S32: 0.1362 S33: 0.4520 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 494 A 590 REMARK 3 ORIGIN FOR THE GROUP (A): -36.8479 30.1004 85.6251 REMARK 3 T TENSOR REMARK 3 T11: 0.0429 T22: 0.0372 REMARK 3 T33: 0.1488 T12: -0.0136 REMARK 3 T13: 0.0734 T23: -0.0243 REMARK 3 L TENSOR REMARK 3 L11: 8.9666 L22: 2.4236 REMARK 3 L33: 2.5474 L12: -3.7148 REMARK 3 L13: 3.6372 L23: -0.8560 REMARK 3 S TENSOR REMARK 3 S11: -0.2633 S12: -0.0215 S13: -0.0493 REMARK 3 S21: 0.2648 S22: -0.0247 S23: 0.3541 REMARK 3 S31: 0.0498 S32: -0.1777 S33: 0.2880 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES: RESIDUAL ONLY REMARK 4 REMARK 4 3L5H COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 07-JAN-10. REMARK 100 THE DEPOSITION ID IS D_1000056857. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-OCT-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95369 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XSCALE REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.9, XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17748 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.600 REMARK 200 RESOLUTION RANGE LOW (A) : 163.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.14800 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.79 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.13400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 78.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.62 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5-2.0M (NH4)2SO4, 0.1M IMIDAZOLE REMARK 280 -MALONATE BUFFER, PH 6.0, EVAPORATION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 25.91050 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 27 REMARK 465 ILE A 83 REMARK 465 GLU A 90 REMARK 465 GLY A 101 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TYR A 8 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU A 12 CG CD OE1 OE2 REMARK 470 GLN A 17 CG CD OE1 NE2 REMARK 470 SER A 20 OG REMARK 470 PHE A 22 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LEU A 28 CG CD1 CD2 REMARK 470 LYS A 29 CG CD CE NZ REMARK 470 GLU A 30 CG CD OE1 OE2 REMARK 470 LYS A 31 CG CD CE NZ REMARK 470 TYR A 35 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 HIS A 37 CG ND1 CD2 CE1 NE2 REMARK 470 TYR A 42 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 46 CG CD CE NZ REMARK 470 ASN A 48 CG OD1 ND2 REMARK 470 PHE A 50 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 54 CG CD CE NZ REMARK 470 GLU A 55 CG CD OE1 OE2 REMARK 470 GLN A 56 CG CD OE1 NE2 REMARK 470 ILE A 59 CG1 CG2 CD1 REMARK 470 ILE A 60 CG1 CG2 CD1 REMARK 470 ARG A 62 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 77 CG1 CG2 CD1 REMARK 470 LEU A 79 CG CD1 CD2 REMARK 470 GLN A 91 CG CD OE1 NE2 REMARK 470 LYS A 106 CG CD CE NZ REMARK 470 LYS A 108 CG CD CE NZ REMARK 470 LYS A 118 CG CD CE NZ REMARK 470 LEU A 132 CG CD1 CD2 REMARK 470 GLU A 133 CG CD OE1 OE2 REMARK 470 GLU A 141 CG CD OE1 OE2 REMARK 470 LYS A 151 CG CD CE NZ REMARK 470 LYS A 184 CG CD CE NZ REMARK 470 SER A 211 OG REMARK 470 GLU A 213 CG CD OE1 OE2 REMARK 470 LEU A 220 CG CD1 CD2 REMARK 470 LYS A 228 CG CD CE NZ REMARK 470 ILE A 237 CG1 CG2 CD1 REMARK 470 SER A 260 OG REMARK 470 VAL A 264 CG1 CG2 REMARK 470 LYS A 268 CG CD CE NZ REMARK 470 GLU A 294 CG CD OE1 OE2 REMARK 470 TYR A 300 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 306 CG CD CE NZ REMARK 470 LYS A 313 CG CD CE NZ REMARK 470 THR A 319 OG1 CG2 REMARK 470 ARG A 323 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 340 CG CD CE NZ REMARK 470 LEU A 342 CG CD1 CD2 REMARK 470 ARG A 350 CG CD NE CZ NH1 NH2 REMARK 470 TRP A 351 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 351 CZ3 CH2 REMARK 470 LYS A 352 CG CD CE NZ REMARK 470 SER A 353 OG REMARK 470 LYS A 364 CG CD CE NZ REMARK 470 LEU A 383 CG CD1 CD2 REMARK 470 LYS A 409 CG CD CE NZ REMARK 470 ARG A 425 CG CD NE CZ NH1 NH2 REMARK 470 SER A 427 OG REMARK 470 LYS A 441 CG CD CE NZ REMARK 470 LYS A 489 CG CD CE NZ REMARK 470 LYS A 493 CG CD CE NZ REMARK 470 LYS A 506 CG CD CE NZ REMARK 470 LYS A 510 CG CD CE NZ REMARK 470 LYS A 590 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N THR A 85 O LEU A 89 1.38 REMARK 500 O SER A 387 O ASP A 388 1.54 REMARK 500 O ASN A 357 CD1 TYR A 358 1.60 REMARK 500 O LEU A 132 O GLU A 133 1.63 REMARK 500 O SER A 257 O THR A 258 1.66 REMARK 500 CD1 LEU A 102 O THR A 130 1.67 REMARK 500 O ALA A 442 O PRO A 443 1.67 REMARK 500 O PRO A 496 O PRO A 497 1.72 REMARK 500 O ALA A 64 OG SER A 65 1.73 REMARK 500 CB VAL A 16 O ILE A 99 1.73 REMARK 500 O ARG A 350 O TRP A 351 1.73 REMARK 500 OG SER A 74 CD2 LEU A 75 1.76 REMARK 500 O THR A 359 O VAL A 360 1.79 REMARK 500 CD1 ILE A 43 N VAL A 44 1.80 REMARK 500 CG2 THR A 63 C8 NAG D 1 1.81 REMARK 500 O PRO A 333 N PHE A 335 1.86 REMARK 500 OE1 GLN A 238 NE ARG A 276 1.88 REMARK 500 O THR A 574 N GLU A 576 1.90 REMARK 500 O ASN A 61 N THR A 63 1.90 REMARK 500 OD1 ASN A 205 O5 NAG B 1 1.90 REMARK 500 OD1 ASN A 224 OH TYR A 235 1.91 REMARK 500 O THR A 47 N HIS A 49 1.95 REMARK 500 CD1 LEU A 515 CD1 LEU A 557 1.96 REMARK 500 CA VAL A 15 CD1 ILE A 99 1.96 REMARK 500 CG2 VAL A 208 O SER A 296 1.98 REMARK 500 CE2 TYR A 491 CA GLY A 527 1.98 REMARK 500 C3 NAG H 1 O5 NAG H 2 1.98 REMARK 500 O THR A 51 CD PRO A 53 1.99 REMARK 500 CE2 TYR A 536 OG1 THR A 544 2.01 REMARK 500 O ASN A 382 N VAL A 384 2.03 REMARK 500 O GLN A 17 N HIS A 19 2.03 REMARK 500 O ASN A 41 N ILE A 43 2.03 REMARK 500 OE2 GLU A 345 C8 NAG G 1 2.04 REMARK 500 O7 NAG H 1 O3 NAG H 2 2.05 REMARK 500 N VAL A 16 O ILE A 99 2.08 REMARK 500 O TYR A 532 N VAL A 548 2.08 REMARK 500 O THR A 574 N GLY A 577 2.09 REMARK 500 C4 NAG C 2 C1 BMA C 3 2.09 REMARK 500 CG2 THR A 134 CB ASN A 180 2.10 REMARK 500 N ASN A 382 O GLY A 385 2.10 REMARK 500 CG2 THR A 80 ND2 ASN A 82 2.13 REMARK 500 O THR A 564 OG1 THR A 587 2.14 REMARK 500 C4 NAG C 1 C1 NAG C 2 2.14 REMARK 500 CD1 TYR A 536 CD2 LEU A 557 2.15 REMARK 500 OD1 ASN A 205 O6 NAG B 1 2.15 REMARK 500 O THR A 556 OG SER A 558 2.17 REMARK 500 N ILE A 172 O PHE A 192 2.18 REMARK 500 O THR A 241 N ASP A 243 2.19 REMARK 500 O THR A 85 N GLY A 87 2.19 REMARK 500 O ARG A 128 N THR A 130 2.19 REMARK 500 REMARK 500 THIS ENTRY HAS 52 CLOSE CONTACTS REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 ND2 ASN A 171 O4 SO4 A 592 2646 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 131 CG HIS A 131 CD2 0.076 REMARK 500 ASP A 549 CB ASP A 549 CG 0.148 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 104 C - N - CA ANGL. DEV. = 10.2 DEGREES REMARK 500 PRO A 200 C - N - CA ANGL. DEV. = 9.3 DEGREES REMARK 500 PRO A 203 C - N - CA ANGL. DEV. = 12.1 DEGREES REMARK 500 PRO A 251 C - N - CA ANGL. DEV. = 9.1 DEGREES REMARK 500 LEU A 365 CA - CB - CG ANGL. DEV. = -17.3 DEGREES REMARK 500 ARG A 461 NE - CZ - NH1 ANGL. DEV. = -3.2 DEGREES REMARK 500 PRO A 497 C - N - CA ANGL. DEV. = -11.0 DEGREES REMARK 500 PRO A 589 C - N - CA ANGL. DEV. = 13.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 3 -147.23 -116.95 REMARK 500 PRO A 5 71.59 -118.95 REMARK 500 CYS A 6 -62.35 15.57 REMARK 500 ILE A 9 -100.69 -103.97 REMARK 500 SER A 10 100.21 164.05 REMARK 500 PRO A 11 -161.74 -102.09 REMARK 500 PRO A 14 -110.40 -119.77 REMARK 500 VAL A 15 96.40 143.61 REMARK 500 LEU A 18 19.12 -33.24 REMARK 500 HIS A 19 86.69 -160.66 REMARK 500 SER A 20 -178.18 -176.86 REMARK 500 ALA A 24 142.25 -32.45 REMARK 500 HIS A 37 27.07 87.01 REMARK 500 VAL A 38 -156.98 -123.02 REMARK 500 ASN A 39 -154.47 -147.40 REMARK 500 ASN A 41 -89.93 -61.46 REMARK 500 TYR A 42 -35.18 -12.50 REMARK 500 LYS A 46 -178.34 -45.60 REMARK 500 THR A 47 89.60 173.22 REMARK 500 ASN A 48 5.40 8.93 REMARK 500 PHE A 50 -136.57 -9.49 REMARK 500 ILE A 52 85.89 -47.40 REMARK 500 PRO A 53 153.49 -27.62 REMARK 500 GLU A 55 -8.08 -52.04 REMARK 500 ILE A 59 107.61 -48.83 REMARK 500 ILE A 60 -72.09 -54.81 REMARK 500 ARG A 62 15.70 -38.82 REMARK 500 THR A 63 89.75 -175.72 REMARK 500 ALA A 64 -121.00 -172.83 REMARK 500 SER A 65 65.74 121.10 REMARK 500 THR A 70 -131.07 -26.55 REMARK 500 ASP A 71 -137.71 -115.80 REMARK 500 ALA A 73 11.07 -153.23 REMARK 500 ASN A 76 -95.40 -108.93 REMARK 500 ILE A 77 108.98 98.83 REMARK 500 CYS A 81 47.66 -98.33 REMARK 500 THR A 85 88.25 -59.64 REMARK 500 PHE A 86 -56.16 5.72 REMARK 500 GLN A 88 146.95 115.94 REMARK 500 ASN A 92 73.98 6.94 REMARK 500 VAL A 93 -74.56 -84.80 REMARK 500 TYR A 94 -56.50 -146.53 REMARK 500 ILE A 96 -153.00 -147.42 REMARK 500 THR A 97 82.74 -159.61 REMARK 500 ILE A 98 172.71 -58.54 REMARK 500 PRO A 103 -145.40 -35.83 REMARK 500 PRO A 104 -125.41 -59.32 REMARK 500 GLU A 105 89.52 135.39 REMARK 500 LYS A 106 110.76 -31.73 REMARK 500 ASN A 109 -76.46 76.88 REMARK 500 REMARK 500 THIS ENTRY HAS 180 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASN A 48 HIS A 49 145.06 REMARK 500 SER A 211 GLU A 212 149.90 REMARK 500 LEU A 214 SER A 215 -143.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 615 REMARK 615 ZERO OCCUPANCY ATOM REMARK 615 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 615 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 615 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 615 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 615 M RES C SSEQI REMARK 615 NAG H 1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3L5I RELATED DB: PDB REMARK 900 RELATED ID: 3L5J RELATED DB: PDB DBREF 3L5H A 2 590 UNP P40189 IL6RB_HUMAN 24 612 SEQRES 1 A 589 LEU LEU ASP PRO CYS GLY TYR ILE SER PRO GLU SER PRO SEQRES 2 A 589 VAL VAL GLN LEU HIS SER ASN PHE THR ALA VAL CYS VAL SEQRES 3 A 589 LEU LYS GLU LYS CYS MET ASP TYR PHE HIS VAL ASN ALA SEQRES 4 A 589 ASN TYR ILE VAL TRP LYS THR ASN HIS PHE THR ILE PRO SEQRES 5 A 589 LYS GLU GLN TYR THR ILE ILE ASN ARG THR ALA SER SER SEQRES 6 A 589 VAL THR PHE THR ASP ILE ALA SER LEU ASN ILE GLN LEU SEQRES 7 A 589 THR CYS ASN ILE LEU THR PHE GLY GLN LEU GLU GLN ASN SEQRES 8 A 589 VAL TYR GLY ILE THR ILE ILE SER GLY LEU PRO PRO GLU SEQRES 9 A 589 LYS PRO LYS ASN LEU SER CYS ILE VAL ASN GLU GLY LYS SEQRES 10 A 589 LYS MET ARG CYS GLU TRP ASP GLY GLY ARG GLU THR HIS SEQRES 11 A 589 LEU GLU THR ASN PHE THR LEU LYS SER GLU TRP ALA THR SEQRES 12 A 589 HIS LYS PHE ALA ASP CYS LYS ALA LYS ARG ASP THR PRO SEQRES 13 A 589 THR SER CYS THR VAL ASP TYR SER THR VAL TYR PHE VAL SEQRES 14 A 589 ASN ILE GLU VAL TRP VAL GLU ALA GLU ASN ALA LEU GLY SEQRES 15 A 589 LYS VAL THR SER ASP HIS ILE ASN PHE ASP PRO VAL TYR SEQRES 16 A 589 LYS VAL LYS PRO ASN PRO PRO HIS ASN LEU SER VAL ILE SEQRES 17 A 589 ASN SER GLU GLU LEU SER SER ILE LEU LYS LEU THR TRP SEQRES 18 A 589 THR ASN PRO SER ILE LYS SER VAL ILE ILE LEU LYS TYR SEQRES 19 A 589 ASN ILE GLN TYR ARG THR LYS ASP ALA SER THR TRP SER SEQRES 20 A 589 GLN ILE PRO PRO GLU ASP THR ALA SER THR ARG SER SER SEQRES 21 A 589 PHE THR VAL GLN ASP LEU LYS PRO PHE THR GLU TYR VAL SEQRES 22 A 589 PHE ARG ILE ARG CYS MET LYS GLU ASP GLY LYS GLY TYR SEQRES 23 A 589 TRP SER ASP TRP SER GLU GLU ALA SER GLY ILE THR TYR SEQRES 24 A 589 GLU ASP ARG PRO SER LYS ALA PRO SER PHE TRP TYR LYS SEQRES 25 A 589 ILE ASP PRO SER HIS THR GLN GLY TYR ARG THR VAL GLN SEQRES 26 A 589 LEU VAL TRP LYS THR LEU PRO PRO PHE GLU ALA ASN GLY SEQRES 27 A 589 LYS ILE LEU ASP TYR GLU VAL THR LEU THR ARG TRP LYS SEQRES 28 A 589 SER HIS LEU GLN ASN TYR THR VAL ASN ALA THR LYS LEU SEQRES 29 A 589 THR VAL ASN LEU THR ASN ASP ARG TYR LEU ALA THR LEU SEQRES 30 A 589 THR VAL ARG ASN LEU VAL GLY LYS SER ASP ALA ALA VAL SEQRES 31 A 589 LEU THR ILE PRO ALA CYS ASP PHE GLN ALA THR HIS PRO SEQRES 32 A 589 VAL MET ASP LEU LYS ALA PHE PRO LYS ASP ASN MET LEU SEQRES 33 A 589 TRP VAL GLU TRP THR THR PRO ARG GLU SER VAL LYS LYS SEQRES 34 A 589 TYR ILE LEU GLU TRP CYS VAL LEU SER ASP LYS ALA PRO SEQRES 35 A 589 CYS ILE THR ASP TRP GLN GLN GLU ASP GLY THR VAL HIS SEQRES 36 A 589 ARG THR TYR LEU ARG GLY ASN LEU ALA GLU SER LYS CYS SEQRES 37 A 589 TYR LEU ILE THR VAL THR PRO VAL TYR ALA ASP GLY PRO SEQRES 38 A 589 GLY SER PRO GLU SER ILE LYS ALA TYR LEU LYS GLN ALA SEQRES 39 A 589 PRO PRO SER LYS GLY PRO THR VAL ARG THR LYS LYS VAL SEQRES 40 A 589 GLY LYS ASN GLU ALA VAL LEU GLU TRP ASP GLN LEU PRO SEQRES 41 A 589 VAL ASP VAL GLN ASN GLY PHE ILE ARG ASN TYR THR ILE SEQRES 42 A 589 PHE TYR ARG THR ILE ILE GLY ASN GLU THR ALA VAL ASN SEQRES 43 A 589 VAL ASP SER SER HIS THR GLU TYR THR LEU SER SER LEU SEQRES 44 A 589 THR SER ASP THR LEU TYR MET VAL ARG MET ALA ALA TYR SEQRES 45 A 589 THR ASP GLU GLY GLY LYS ASP GLY PRO GLU PHE THR PHE SEQRES 46 A 589 THR THR PRO LYS MODRES 3L5H ASN A 361 ASN GLYCOSYLATION SITE MODRES 3L5H ASN A 531 ASN GLYCOSYLATION SITE MODRES 3L5H ASN A 205 ASN GLYCOSYLATION SITE MODRES 3L5H ASN A 61 ASN GLYCOSYLATION SITE MODRES 3L5H ASN A 357 ASN GLYCOSYLATION SITE MODRES 3L5H ASN A 21 ASN GLYCOSYLATION SITE HET NAG B 1 14 HET NAG B 2 14 HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET BMA C 4 11 HET NAG D 1 14 HET NAG D 2 14 HET NAG E 1 14 HET NAG E 2 14 HET BMA E 3 11 HET NAG F 1 14 HET NAG F 2 14 HET BMA F 3 11 HET BMA F 4 11 HET NAG G 1 14 HET FUC G 2 10 HET NAG H 1 14 HET NAG H 2 14 HET SO4 A 1 5 HET SO4 A 591 5 HET SO4 A 592 5 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM SO4 SULFATE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE FORMUL 2 NAG 13(C8 H15 N O6) FORMUL 3 BMA 5(C6 H12 O6) FORMUL 7 FUC C6 H12 O5 FORMUL 9 SO4 3(O4 S 2-) HELIX 1 1 PRO A 53 TYR A 57 5 5 HELIX 2 2 ASP A 193 TYR A 196 5 4 HELIX 3 3 PRO A 225 VAL A 230 5 6 HELIX 4 4 PRO A 521 ASN A 526 1 6 SHEET 1 A 3 MET A 120 ASP A 125 0 SHEET 2 A 3 LYS A 108 ASN A 115 -1 N ILE A 113 O ARG A 121 SHEET 3 A 3 VAL A 198 LYS A 199 1 O LYS A 199 N VAL A 114 SHEET 1 B 3 CYS A 150 LYS A 151 0 SHEET 2 B 3 THR A 134 LEU A 138 -1 N LEU A 138 O CYS A 150 SHEET 3 B 3 VAL A 176 ASN A 180 -1 O GLU A 179 N ASN A 135 SHEET 1 C 2 ILE A 172 VAL A 174 0 SHEET 2 C 2 ILE A 190 PHE A 192 -1 O PHE A 192 N ILE A 172 SHEET 1 D 3 SER A 207 ILE A 209 0 SHEET 2 D 3 LEU A 218 THR A 221 -1 O LYS A 219 N ILE A 209 SHEET 3 D 3 SER A 261 VAL A 264 -1 O PHE A 262 N LEU A 220 SHEET 1 E 2 LEU A 233 THR A 241 0 SHEET 2 E 2 TYR A 273 LYS A 281 -1 O MET A 280 N LYS A 234 SHEET 1 F 3 PHE A 310 LYS A 313 0 SHEET 2 F 3 VAL A 325 TRP A 329 -1 O GLN A 326 N LYS A 313 SHEET 3 F 3 THR A 366 VAL A 367 -1 O VAL A 367 N VAL A 325 SHEET 1 G 2 ASP A 343 LEU A 348 0 SHEET 2 G 2 ALA A 376 ARG A 381 -1 O THR A 379 N GLU A 345 SHEET 1 H 3 LYS A 409 PRO A 412 0 SHEET 2 H 3 LEU A 417 GLU A 420 -1 O TRP A 418 N PHE A 411 SHEET 3 H 3 ARG A 457 TYR A 459 -1 O THR A 458 N VAL A 419 SHEET 1 I 4 THR A 446 TRP A 448 0 SHEET 2 I 4 GLU A 434 LEU A 438 -1 N TRP A 435 O ASP A 447 SHEET 3 I 4 CYS A 469 VAL A 474 -1 O CYS A 469 N LEU A 438 SHEET 4 I 4 GLU A 486 TYR A 491 -1 O GLU A 486 N VAL A 474 SHEET 1 J 2 VAL A 477 TYR A 478 0 SHEET 2 J 2 GLY A 481 PRO A 482 -1 O GLY A 481 N TYR A 478 SHEET 1 K 2 THR A 505 LYS A 506 0 SHEET 2 K 2 VAL A 514 LEU A 515 -1 O VAL A 514 N LYS A 506 SHEET 1 L 4 VAL A 546 VAL A 548 0 SHEET 2 L 4 ILE A 529 ILE A 534 -1 N TYR A 532 O VAL A 548 SHEET 3 L 4 MET A 570 THR A 574 -1 O ALA A 571 N THR A 533 SHEET 4 L 4 GLY A 577 ASP A 580 -1 O GLY A 577 N THR A 574 SHEET 1 M 2 TYR A 566 MET A 567 0 SHEET 2 M 2 THR A 585 PHE A 586 -1 O PHE A 586 N TYR A 566 SSBOND 1 CYS A 6 CYS A 32 1555 1555 2.04 SSBOND 2 CYS A 26 CYS A 81 1555 1555 2.06 SSBOND 3 CYS A 112 CYS A 122 1555 1555 2.08 SSBOND 4 CYS A 150 CYS A 160 1555 1555 2.07 SSBOND 5 CYS A 436 CYS A 444 1555 1555 2.07 LINK ND2 ASN A 21 C1 NAG H 1 1555 1555 1.54 LINK ND2 ASN A 61 C1 NAG D 1 1555 1555 1.46 LINK ND2 ASN A 135 C1 NAG C 1 1555 1555 1.45 LINK ND2 ASN A 205 C1 NAG B 1 1555 1555 1.46 LINK ND2 ASN A 357 C1 NAG G 1 1555 1555 1.48 LINK ND2 ASN A 361 C1 NAG E 1 1555 1555 1.43 LINK ND2 ASN A 531 C1 NAG F 1 1555 1555 1.45 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.50 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.44 LINK O4 BMA C 3 C1 BMA C 4 1555 1555 1.45 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.45 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.44 LINK O4 NAG E 2 C1 BMA E 3 1555 1555 1.46 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.44 LINK O4 NAG F 2 C1 BMA F 3 1555 1555 1.45 LINK O4 BMA F 3 C1 BMA F 4 1555 1555 1.45 LINK O6 NAG G 1 C1 FUC G 2 1555 1555 1.46 LINK O4 NAG H 1 C1 NAG H 2 1555 1555 1.45 CISPEP 1 SER A 10 PRO A 11 0 -15.46 CISPEP 2 GLY A 385 LYS A 386 0 9.86 CISPEP 3 LYS A 413 ASP A 414 0 1.63 CRYST1 89.001 51.821 167.157 90.00 102.17 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011236 0.000000 0.002423 0.00000 SCALE2 0.000000 0.019297 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006120 0.00000