data_3L5Z # _entry.id 3L5Z # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3L5Z RCSB RCSB056875 WWPDB D_1000056875 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id APC37964.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3L5Z _pdbx_database_status.recvd_initial_deposition_date 2009-12-22 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Chang, C.' 1 'Hatzos, C.' 2 'Feldmann, B.' 3 'Clancy, S.' 4 'Joachimiak, A.' 5 'Midwest Center for Structural Genomics (MCSG)' 6 # _citation.id primary _citation.title 'Crystal structure of transcriptional regulator, GntR family from Bacillus cereus' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Chang, C.' 1 primary 'Hatzos, C.' 2 primary 'Feldmann, B.' 3 primary 'Clancy, S.' 4 primary 'Joachimiak, A.' 5 # _cell.entry_id 3L5Z _cell.length_a 121.191 _cell.length_b 121.191 _cell.length_c 114.693 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3L5Z _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Transcriptional regulator, GntR family' 17891.828 2 ? ? ? ? 2 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 3 non-polymer syn '1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE' 178.226 1 ? ? ? ? 4 water nat water 18.015 49 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SNAVYGSEVESKIIEFTIVGADEIIAEKLGISVGDFVYKIIRLRIIHSIPTI(MSE)EHTW(MSE)PIAVIPGVEASVLE ESIYSYIQNKLGLKVGTSVVRVKGIRPDDKEKQF(MSE)NLTNQDFL(MSE)RVEQVAYLTDGRTFEYSYADHLPETFEF ETVITAKSYKEA ; _entity_poly.pdbx_seq_one_letter_code_can ;SNAVYGSEVESKIIEFTIVGADEIIAEKLGISVGDFVYKIIRLRIIHSIPTIMEHTWMPIAVIPGVEASVLEESIYSYIQ NKLGLKVGTSVVRVKGIRPDDKEKQFMNLTNQDFLMRVEQVAYLTDGRTFEYSYADHLPETFEFETVITAKSYKEA ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier APC37964.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 VAL n 1 5 TYR n 1 6 GLY n 1 7 SER n 1 8 GLU n 1 9 VAL n 1 10 GLU n 1 11 SER n 1 12 LYS n 1 13 ILE n 1 14 ILE n 1 15 GLU n 1 16 PHE n 1 17 THR n 1 18 ILE n 1 19 VAL n 1 20 GLY n 1 21 ALA n 1 22 ASP n 1 23 GLU n 1 24 ILE n 1 25 ILE n 1 26 ALA n 1 27 GLU n 1 28 LYS n 1 29 LEU n 1 30 GLY n 1 31 ILE n 1 32 SER n 1 33 VAL n 1 34 GLY n 1 35 ASP n 1 36 PHE n 1 37 VAL n 1 38 TYR n 1 39 LYS n 1 40 ILE n 1 41 ILE n 1 42 ARG n 1 43 LEU n 1 44 ARG n 1 45 ILE n 1 46 ILE n 1 47 HIS n 1 48 SER n 1 49 ILE n 1 50 PRO n 1 51 THR n 1 52 ILE n 1 53 MSE n 1 54 GLU n 1 55 HIS n 1 56 THR n 1 57 TRP n 1 58 MSE n 1 59 PRO n 1 60 ILE n 1 61 ALA n 1 62 VAL n 1 63 ILE n 1 64 PRO n 1 65 GLY n 1 66 VAL n 1 67 GLU n 1 68 ALA n 1 69 SER n 1 70 VAL n 1 71 LEU n 1 72 GLU n 1 73 GLU n 1 74 SER n 1 75 ILE n 1 76 TYR n 1 77 SER n 1 78 TYR n 1 79 ILE n 1 80 GLN n 1 81 ASN n 1 82 LYS n 1 83 LEU n 1 84 GLY n 1 85 LEU n 1 86 LYS n 1 87 VAL n 1 88 GLY n 1 89 THR n 1 90 SER n 1 91 VAL n 1 92 VAL n 1 93 ARG n 1 94 VAL n 1 95 LYS n 1 96 GLY n 1 97 ILE n 1 98 ARG n 1 99 PRO n 1 100 ASP n 1 101 ASP n 1 102 LYS n 1 103 GLU n 1 104 LYS n 1 105 GLN n 1 106 PHE n 1 107 MSE n 1 108 ASN n 1 109 LEU n 1 110 THR n 1 111 ASN n 1 112 GLN n 1 113 ASP n 1 114 PHE n 1 115 LEU n 1 116 MSE n 1 117 ARG n 1 118 VAL n 1 119 GLU n 1 120 GLN n 1 121 VAL n 1 122 ALA n 1 123 TYR n 1 124 LEU n 1 125 THR n 1 126 ASP n 1 127 GLY n 1 128 ARG n 1 129 THR n 1 130 PHE n 1 131 GLU n 1 132 TYR n 1 133 SER n 1 134 TYR n 1 135 ALA n 1 136 ASP n 1 137 HIS n 1 138 LEU n 1 139 PRO n 1 140 GLU n 1 141 THR n 1 142 PHE n 1 143 GLU n 1 144 PHE n 1 145 GLU n 1 146 THR n 1 147 VAL n 1 148 ILE n 1 149 THR n 1 150 ALA n 1 151 LYS n 1 152 SER n 1 153 TYR n 1 154 LYS n 1 155 GLU n 1 156 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene BCE_3424 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 10987' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus cereus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 222523 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3) magic' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG19 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q734I1_BACC1 _struct_ref.pdbx_db_accession Q734I1 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;AVYGSEVESKIIEFTIVGADEIIAEKLGISVGDFVYKIIRLRIIHSIPTIMEHTWMPIAVIPGVEASVLEESIYSYIQNK LGLKVGTSVVRVKGIRPDDKEKQFMNLTNQDFLMRVEQVAYLTDGRTFEYSYADHLPETFEFETVITAKSYKEA ; _struct_ref.pdbx_align_begin 92 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3L5Z A 3 ? 156 ? Q734I1 92 ? 245 ? 92 245 2 1 3L5Z B 3 ? 156 ? Q734I1 92 ? 245 ? 92 245 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3L5Z SER A 1 ? UNP Q734I1 ? ? 'expression tag' 90 1 1 3L5Z ASN A 2 ? UNP Q734I1 ? ? 'expression tag' 91 2 2 3L5Z SER B 1 ? UNP Q734I1 ? ? 'expression tag' 90 3 2 3L5Z ASN B 2 ? UNP Q734I1 ? ? 'expression tag' 91 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PG5 non-polymer . '1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE' ? 'C8 H18 O4' 178.226 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3L5Z _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 5.88 _exptl_crystal.density_percent_sol 79.10 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 297 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '0.2M MgCl2, 0.1M Tris-Cl pH 8.5, 30% PEG 400, VAPOR DIFFUSION, SITTING DROP, temperature 297K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2009-11-02 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111) double crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97931 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97931 # _reflns.entry_id 3L5Z _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.9 _reflns.number_obs 19580 _reflns.number_all 19581 _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs 0.139 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 29.67 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 14.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.90 _reflns_shell.d_res_low 2.95 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.771 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.17 _reflns_shell.pdbx_redundancy 14.5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 968 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3L5Z _refine.ls_number_reflns_obs 19505 _refine.ls_number_reflns_all 19505 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50 _refine.ls_d_res_high 2.90 _refine.ls_percent_reflns_obs 99.82 _refine.ls_R_factor_obs 0.20554 _refine.ls_R_factor_all 0.20554 _refine.ls_R_factor_R_work 0.20355 _refine.ls_R_factor_R_free 0.24324 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 994 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.936 _refine.correlation_coeff_Fo_to_Fc_free 0.894 _refine.B_iso_mean 31.483 _refine.aniso_B[1][1] -3.52 _refine.aniso_B[2][2] -3.52 _refine.aniso_B[3][3] 7.04 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.307 _refine.pdbx_overall_ESU_R_Free 0.257 _refine.overall_SU_ML 0.184 _refine.overall_SU_B 21.077 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2298 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 16 _refine_hist.number_atoms_solvent 49 _refine_hist.number_atoms_total 2363 _refine_hist.d_res_high 2.90 _refine_hist.d_res_low 50 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.011 0.022 ? 2356 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.304 1.968 ? 3184 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.476 5.000 ? 284 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 25.139 24.423 ? 104 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 16.144 15.000 ? 428 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 11.138 15.000 ? 12 'X-RAY DIFFRACTION' ? r_chiral_restr 0.095 0.200 ? 372 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.021 ? 1718 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.496 1.500 ? 1422 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 0.980 2.000 ? 2336 'X-RAY DIFFRACTION' ? r_scbond_it 1.548 3.000 ? 934 'X-RAY DIFFRACTION' ? r_scangle_it 2.751 4.500 ? 848 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.899 _refine_ls_shell.d_res_low 2.974 _refine_ls_shell.number_reflns_R_work 1344 _refine_ls_shell.R_factor_R_work 0.291 _refine_ls_shell.percent_reflns_obs 99.57 _refine_ls_shell.R_factor_R_free 0.352 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 59 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 1403 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3L5Z _struct.title 'Crystal structure of transcriptional regulator, GntR family from Bacillus cereus' _struct.pdbx_descriptor 'Transcriptional regulator, GntR family' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3L5Z _struct_keywords.pdbx_keywords 'transcription regulator' _struct_keywords.text ;transcriptional regulator, GntR family, Structural genomics, MCSG, PSI-2, Protein Structure Initiative, Midwest Center for Structural Genomics, DNA-binding, Transcription, Transcription regulation, transcription regulator ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 22 ? GLY A 30 ? ASP A 111 GLY A 119 1 ? 9 HELX_P HELX_P2 2 VAL A 66 ? LEU A 71 ? VAL A 155 LEU A 160 1 ? 6 HELX_P HELX_P3 3 SER A 74 ? LYS A 82 ? SER A 163 LYS A 171 1 ? 9 HELX_P HELX_P4 4 ASP A 100 ? MSE A 107 ? ASP A 189 MSE A 196 1 ? 8 HELX_P HELX_P5 5 PRO A 139 ? PHE A 142 ? PRO A 228 PHE A 231 5 ? 4 HELX_P HELX_P6 6 ASP B 22 ? GLY B 30 ? ASP B 111 GLY B 119 1 ? 9 HELX_P HELX_P7 7 VAL B 66 ? GLU B 73 ? VAL B 155 GLU B 162 1 ? 8 HELX_P HELX_P8 8 SER B 74 ? LYS B 82 ? SER B 163 LYS B 171 1 ? 9 HELX_P HELX_P9 9 ASP B 100 ? ASN B 108 ? ASP B 189 ASN B 197 1 ? 9 HELX_P HELX_P10 10 PRO B 139 ? PHE B 142 ? PRO B 228 PHE B 231 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ILE 52 C ? ? ? 1_555 A MSE 53 N ? ? A ILE 141 A MSE 142 1_555 ? ? ? ? ? ? ? 1.331 ? covale2 covale ? ? A MSE 53 C ? ? ? 1_555 A GLU 54 N ? ? A MSE 142 A GLU 143 1_555 ? ? ? ? ? ? ? 1.332 ? covale3 covale ? ? A TRP 57 C ? ? ? 1_555 A MSE 58 N ? ? A TRP 146 A MSE 147 1_555 ? ? ? ? ? ? ? 1.332 ? covale4 covale ? ? A MSE 58 C ? ? ? 1_555 A PRO 59 N ? ? A MSE 147 A PRO 148 1_555 ? ? ? ? ? ? ? 1.343 ? covale5 covale ? ? A PHE 106 C ? ? ? 1_555 A MSE 107 N ? ? A PHE 195 A MSE 196 1_555 ? ? ? ? ? ? ? 1.335 ? covale6 covale ? ? A MSE 107 C ? ? ? 1_555 A ASN 108 N ? ? A MSE 196 A ASN 197 1_555 ? ? ? ? ? ? ? 1.333 ? covale7 covale ? ? A LEU 115 C ? ? ? 1_555 A MSE 116 N ? ? A LEU 204 A MSE 205 1_555 ? ? ? ? ? ? ? 1.326 ? covale8 covale ? ? A MSE 116 C ? ? ? 1_555 A ARG 117 N ? ? A MSE 205 A ARG 206 1_555 ? ? ? ? ? ? ? 1.328 ? covale9 covale ? ? B ILE 52 C ? ? ? 1_555 B MSE 53 N ? ? B ILE 141 B MSE 142 1_555 ? ? ? ? ? ? ? 1.332 ? covale10 covale ? ? B MSE 53 C ? ? ? 1_555 B GLU 54 N ? ? B MSE 142 B GLU 143 1_555 ? ? ? ? ? ? ? 1.331 ? covale11 covale ? ? B TRP 57 C ? ? ? 1_555 B MSE 58 N ? ? B TRP 146 B MSE 147 1_555 ? ? ? ? ? ? ? 1.334 ? covale12 covale ? ? B MSE 58 C ? ? ? 1_555 B PRO 59 N ? ? B MSE 147 B PRO 148 1_555 ? ? ? ? ? ? ? 1.334 ? covale13 covale ? ? B PHE 106 C ? ? ? 1_555 B MSE 107 N ? ? B PHE 195 B MSE 196 1_555 ? ? ? ? ? ? ? 1.333 ? covale14 covale ? ? B MSE 107 C ? ? ? 1_555 B ASN 108 N ? ? B MSE 196 B ASN 197 1_555 ? ? ? ? ? ? ? 1.335 ? covale15 covale ? ? B LEU 115 C ? ? ? 1_555 B MSE 116 N ? ? B LEU 204 B MSE 205 1_555 ? ? ? ? ? ? ? 1.328 ? covale16 covale ? ? B MSE 116 C ? ? ? 1_555 B ARG 117 N ? ? B MSE 205 B ARG 206 1_555 ? ? ? ? ? ? ? 1.326 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 9 ? GLY A 20 ? VAL A 98 GLY A 109 A 2 PHE A 36 ? ILE A 46 ? PHE A 125 ILE A 135 A 3 ILE A 49 ? PRO A 59 ? ILE A 138 PRO A 148 A 4 THR A 129 ? HIS A 137 ? THR A 218 HIS A 226 A 5 LEU A 115 ? LEU A 124 ? LEU A 204 LEU A 213 A 6 VAL A 87 ? ILE A 97 ? VAL A 176 ILE A 186 A 7 PHE B 144 ? ILE B 148 ? PHE B 233 ILE B 237 B 1 GLU A 145 ? ILE A 148 ? GLU A 234 ILE A 237 B 2 VAL B 87 ? ILE B 97 ? VAL B 176 ILE B 186 B 3 LEU B 115 ? LEU B 124 ? LEU B 204 LEU B 213 B 4 THR B 129 ? HIS B 137 ? THR B 218 HIS B 226 B 5 ILE B 49 ? PRO B 59 ? ILE B 138 PRO B 148 B 6 PHE B 36 ? ILE B 46 ? PHE B 125 ILE B 135 B 7 VAL B 9 ? GLY B 20 ? VAL B 98 GLY B 109 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLU A 10 ? N GLU A 99 O ILE A 45 ? O ILE A 134 A 2 3 N TYR A 38 ? N TYR A 127 O MSE A 58 ? O MSE A 147 A 3 4 N TRP A 57 ? N TRP A 146 O TYR A 132 ? O TYR A 221 A 4 5 O SER A 133 ? O SER A 222 N GLN A 120 ? N GLN A 209 A 5 6 O TYR A 123 ? O TYR A 212 N GLY A 88 ? N GLY A 177 A 6 7 N VAL A 92 ? N VAL A 181 O THR B 146 ? O THR B 235 B 1 2 N THR A 146 ? N THR A 235 O VAL B 92 ? O VAL B 181 B 2 3 N ARG B 93 ? N ARG B 182 O GLU B 119 ? O GLU B 208 B 3 4 N GLN B 120 ? N GLN B 209 O SER B 133 ? O SER B 222 B 4 5 O TYR B 132 ? O TYR B 221 N TRP B 57 ? N TRP B 146 B 5 6 O GLU B 54 ? O GLU B 143 N ARG B 42 ? N ARG B 131 B 6 7 O ILE B 41 ? O ILE B 130 N ILE B 14 ? N ILE B 103 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE EDO B 1' AC2 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE PG5 B 246' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 GLU A 67 ? GLU A 156 . ? 6_565 ? 2 AC1 2 GLY B 34 ? GLY B 123 . ? 1_555 ? 3 AC2 4 HOH F . ? HOH B 46 . ? 1_555 ? 4 AC2 4 GLU B 145 ? GLU B 234 . ? 1_555 ? 5 AC2 4 THR B 146 ? THR B 235 . ? 1_555 ? 6 AC2 4 VAL B 147 ? VAL B 236 . ? 1_555 ? # _database_PDB_matrix.entry_id 3L5Z _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3L5Z _atom_sites.fract_transf_matrix[1][1] 0.008251 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008251 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008719 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 90 ? ? ? A . n A 1 2 ASN 2 91 ? ? ? A . n A 1 3 ALA 3 92 ? ? ? A . n A 1 4 VAL 4 93 ? ? ? A . n A 1 5 TYR 5 94 ? ? ? A . n A 1 6 GLY 6 95 ? ? ? A . n A 1 7 SER 7 96 96 SER SER A . n A 1 8 GLU 8 97 97 GLU GLU A . n A 1 9 VAL 9 98 98 VAL VAL A . n A 1 10 GLU 10 99 99 GLU GLU A . n A 1 11 SER 11 100 100 SER SER A . n A 1 12 LYS 12 101 101 LYS LYS A . n A 1 13 ILE 13 102 102 ILE ILE A . n A 1 14 ILE 14 103 103 ILE ILE A . n A 1 15 GLU 15 104 104 GLU GLU A . n A 1 16 PHE 16 105 105 PHE PHE A . n A 1 17 THR 17 106 106 THR THR A . n A 1 18 ILE 18 107 107 ILE ILE A . n A 1 19 VAL 19 108 108 VAL VAL A . n A 1 20 GLY 20 109 109 GLY GLY A . n A 1 21 ALA 21 110 110 ALA ALA A . n A 1 22 ASP 22 111 111 ASP ASP A . n A 1 23 GLU 23 112 112 GLU GLU A . n A 1 24 ILE 24 113 113 ILE ILE A . n A 1 25 ILE 25 114 114 ILE ILE A . n A 1 26 ALA 26 115 115 ALA ALA A . n A 1 27 GLU 27 116 116 GLU GLU A . n A 1 28 LYS 28 117 117 LYS LYS A . n A 1 29 LEU 29 118 118 LEU LEU A . n A 1 30 GLY 30 119 119 GLY GLY A . n A 1 31 ILE 31 120 120 ILE ILE A . n A 1 32 SER 32 121 121 SER SER A . n A 1 33 VAL 33 122 122 VAL VAL A . n A 1 34 GLY 34 123 123 GLY GLY A . n A 1 35 ASP 35 124 124 ASP ASP A . n A 1 36 PHE 36 125 125 PHE PHE A . n A 1 37 VAL 37 126 126 VAL VAL A . n A 1 38 TYR 38 127 127 TYR TYR A . n A 1 39 LYS 39 128 128 LYS LYS A . n A 1 40 ILE 40 129 129 ILE ILE A . n A 1 41 ILE 41 130 130 ILE ILE A . n A 1 42 ARG 42 131 131 ARG ARG A . n A 1 43 LEU 43 132 132 LEU LEU A . n A 1 44 ARG 44 133 133 ARG ARG A . n A 1 45 ILE 45 134 134 ILE ILE A . n A 1 46 ILE 46 135 135 ILE ILE A . n A 1 47 HIS 47 136 136 HIS HIS A . n A 1 48 SER 48 137 137 SER SER A . n A 1 49 ILE 49 138 138 ILE ILE A . n A 1 50 PRO 50 139 139 PRO PRO A . n A 1 51 THR 51 140 140 THR THR A . n A 1 52 ILE 52 141 141 ILE ILE A . n A 1 53 MSE 53 142 142 MSE MSE A . n A 1 54 GLU 54 143 143 GLU GLU A . n A 1 55 HIS 55 144 144 HIS HIS A . n A 1 56 THR 56 145 145 THR THR A . n A 1 57 TRP 57 146 146 TRP TRP A . n A 1 58 MSE 58 147 147 MSE MSE A . n A 1 59 PRO 59 148 148 PRO PRO A . n A 1 60 ILE 60 149 149 ILE ILE A . n A 1 61 ALA 61 150 150 ALA ALA A . n A 1 62 VAL 62 151 151 VAL VAL A . n A 1 63 ILE 63 152 152 ILE ILE A . n A 1 64 PRO 64 153 153 PRO PRO A . n A 1 65 GLY 65 154 154 GLY GLY A . n A 1 66 VAL 66 155 155 VAL VAL A . n A 1 67 GLU 67 156 156 GLU GLU A . n A 1 68 ALA 68 157 157 ALA ALA A . n A 1 69 SER 69 158 158 SER SER A . n A 1 70 VAL 70 159 159 VAL VAL A . n A 1 71 LEU 71 160 160 LEU LEU A . n A 1 72 GLU 72 161 161 GLU GLU A . n A 1 73 GLU 73 162 162 GLU GLU A . n A 1 74 SER 74 163 163 SER SER A . n A 1 75 ILE 75 164 164 ILE ILE A . n A 1 76 TYR 76 165 165 TYR TYR A . n A 1 77 SER 77 166 166 SER SER A . n A 1 78 TYR 78 167 167 TYR TYR A . n A 1 79 ILE 79 168 168 ILE ILE A . n A 1 80 GLN 80 169 169 GLN GLN A . n A 1 81 ASN 81 170 170 ASN ASN A . n A 1 82 LYS 82 171 171 LYS LYS A . n A 1 83 LEU 83 172 172 LEU LEU A . n A 1 84 GLY 84 173 173 GLY GLY A . n A 1 85 LEU 85 174 174 LEU LEU A . n A 1 86 LYS 86 175 175 LYS LYS A . n A 1 87 VAL 87 176 176 VAL VAL A . n A 1 88 GLY 88 177 177 GLY GLY A . n A 1 89 THR 89 178 178 THR THR A . n A 1 90 SER 90 179 179 SER SER A . n A 1 91 VAL 91 180 180 VAL VAL A . n A 1 92 VAL 92 181 181 VAL VAL A . n A 1 93 ARG 93 182 182 ARG ARG A . n A 1 94 VAL 94 183 183 VAL VAL A . n A 1 95 LYS 95 184 184 LYS LYS A . n A 1 96 GLY 96 185 185 GLY GLY A . n A 1 97 ILE 97 186 186 ILE ILE A . n A 1 98 ARG 98 187 187 ARG ARG A . n A 1 99 PRO 99 188 188 PRO PRO A . n A 1 100 ASP 100 189 189 ASP ASP A . n A 1 101 ASP 101 190 190 ASP ASP A . n A 1 102 LYS 102 191 191 LYS LYS A . n A 1 103 GLU 103 192 192 GLU GLU A . n A 1 104 LYS 104 193 193 LYS LYS A . n A 1 105 GLN 105 194 194 GLN GLN A . n A 1 106 PHE 106 195 195 PHE PHE A . n A 1 107 MSE 107 196 196 MSE MSE A . n A 1 108 ASN 108 197 197 ASN ASN A . n A 1 109 LEU 109 198 198 LEU LEU A . n A 1 110 THR 110 199 199 THR THR A . n A 1 111 ASN 111 200 200 ASN ASN A . n A 1 112 GLN 112 201 201 GLN GLN A . n A 1 113 ASP 113 202 202 ASP ASP A . n A 1 114 PHE 114 203 203 PHE PHE A . n A 1 115 LEU 115 204 204 LEU LEU A . n A 1 116 MSE 116 205 205 MSE MSE A . n A 1 117 ARG 117 206 206 ARG ARG A . n A 1 118 VAL 118 207 207 VAL VAL A . n A 1 119 GLU 119 208 208 GLU GLU A . n A 1 120 GLN 120 209 209 GLN GLN A . n A 1 121 VAL 121 210 210 VAL VAL A . n A 1 122 ALA 122 211 211 ALA ALA A . n A 1 123 TYR 123 212 212 TYR TYR A . n A 1 124 LEU 124 213 213 LEU LEU A . n A 1 125 THR 125 214 214 THR THR A . n A 1 126 ASP 126 215 215 ASP ASP A . n A 1 127 GLY 127 216 216 GLY GLY A . n A 1 128 ARG 128 217 217 ARG ARG A . n A 1 129 THR 129 218 218 THR THR A . n A 1 130 PHE 130 219 219 PHE PHE A . n A 1 131 GLU 131 220 220 GLU GLU A . n A 1 132 TYR 132 221 221 TYR TYR A . n A 1 133 SER 133 222 222 SER SER A . n A 1 134 TYR 134 223 223 TYR TYR A . n A 1 135 ALA 135 224 224 ALA ALA A . n A 1 136 ASP 136 225 225 ASP ASP A . n A 1 137 HIS 137 226 226 HIS HIS A . n A 1 138 LEU 138 227 227 LEU LEU A . n A 1 139 PRO 139 228 228 PRO PRO A . n A 1 140 GLU 140 229 229 GLU GLU A . n A 1 141 THR 141 230 230 THR THR A . n A 1 142 PHE 142 231 231 PHE PHE A . n A 1 143 GLU 143 232 232 GLU GLU A . n A 1 144 PHE 144 233 233 PHE PHE A . n A 1 145 GLU 145 234 234 GLU GLU A . n A 1 146 THR 146 235 235 THR THR A . n A 1 147 VAL 147 236 236 VAL VAL A . n A 1 148 ILE 148 237 237 ILE ILE A . n A 1 149 THR 149 238 238 THR THR A . n A 1 150 ALA 150 239 ? ? ? A . n A 1 151 LYS 151 240 ? ? ? A . n A 1 152 SER 152 241 ? ? ? A . n A 1 153 TYR 153 242 ? ? ? A . n A 1 154 LYS 154 243 ? ? ? A . n A 1 155 GLU 155 244 ? ? ? A . n A 1 156 ALA 156 245 ? ? ? A . n B 1 1 SER 1 90 ? ? ? B . n B 1 2 ASN 2 91 ? ? ? B . n B 1 3 ALA 3 92 ? ? ? B . n B 1 4 VAL 4 93 ? ? ? B . n B 1 5 TYR 5 94 ? ? ? B . n B 1 6 GLY 6 95 ? ? ? B . n B 1 7 SER 7 96 96 SER SER B . n B 1 8 GLU 8 97 97 GLU GLU B . n B 1 9 VAL 9 98 98 VAL VAL B . n B 1 10 GLU 10 99 99 GLU GLU B . n B 1 11 SER 11 100 100 SER SER B . n B 1 12 LYS 12 101 101 LYS LYS B . n B 1 13 ILE 13 102 102 ILE ILE B . n B 1 14 ILE 14 103 103 ILE ILE B . n B 1 15 GLU 15 104 104 GLU GLU B . n B 1 16 PHE 16 105 105 PHE PHE B . n B 1 17 THR 17 106 106 THR THR B . n B 1 18 ILE 18 107 107 ILE ILE B . n B 1 19 VAL 19 108 108 VAL VAL B . n B 1 20 GLY 20 109 109 GLY GLY B . n B 1 21 ALA 21 110 110 ALA ALA B . n B 1 22 ASP 22 111 111 ASP ASP B . n B 1 23 GLU 23 112 112 GLU GLU B . n B 1 24 ILE 24 113 113 ILE ILE B . n B 1 25 ILE 25 114 114 ILE ILE B . n B 1 26 ALA 26 115 115 ALA ALA B . n B 1 27 GLU 27 116 116 GLU GLU B . n B 1 28 LYS 28 117 117 LYS LYS B . n B 1 29 LEU 29 118 118 LEU LEU B . n B 1 30 GLY 30 119 119 GLY GLY B . n B 1 31 ILE 31 120 120 ILE ILE B . n B 1 32 SER 32 121 121 SER SER B . n B 1 33 VAL 33 122 122 VAL VAL B . n B 1 34 GLY 34 123 123 GLY GLY B . n B 1 35 ASP 35 124 124 ASP ASP B . n B 1 36 PHE 36 125 125 PHE PHE B . n B 1 37 VAL 37 126 126 VAL VAL B . n B 1 38 TYR 38 127 127 TYR TYR B . n B 1 39 LYS 39 128 128 LYS LYS B . n B 1 40 ILE 40 129 129 ILE ILE B . n B 1 41 ILE 41 130 130 ILE ILE B . n B 1 42 ARG 42 131 131 ARG ARG B . n B 1 43 LEU 43 132 132 LEU LEU B . n B 1 44 ARG 44 133 133 ARG ARG B . n B 1 45 ILE 45 134 134 ILE ILE B . n B 1 46 ILE 46 135 135 ILE ILE B . n B 1 47 HIS 47 136 136 HIS HIS B . n B 1 48 SER 48 137 137 SER SER B . n B 1 49 ILE 49 138 138 ILE ILE B . n B 1 50 PRO 50 139 139 PRO PRO B . n B 1 51 THR 51 140 140 THR THR B . n B 1 52 ILE 52 141 141 ILE ILE B . n B 1 53 MSE 53 142 142 MSE MSE B . n B 1 54 GLU 54 143 143 GLU GLU B . n B 1 55 HIS 55 144 144 HIS HIS B . n B 1 56 THR 56 145 145 THR THR B . n B 1 57 TRP 57 146 146 TRP TRP B . n B 1 58 MSE 58 147 147 MSE MSE B . n B 1 59 PRO 59 148 148 PRO PRO B . n B 1 60 ILE 60 149 149 ILE ILE B . n B 1 61 ALA 61 150 150 ALA ALA B . n B 1 62 VAL 62 151 151 VAL VAL B . n B 1 63 ILE 63 152 152 ILE ILE B . n B 1 64 PRO 64 153 153 PRO PRO B . n B 1 65 GLY 65 154 154 GLY GLY B . n B 1 66 VAL 66 155 155 VAL VAL B . n B 1 67 GLU 67 156 156 GLU GLU B . n B 1 68 ALA 68 157 157 ALA ALA B . n B 1 69 SER 69 158 158 SER SER B . n B 1 70 VAL 70 159 159 VAL VAL B . n B 1 71 LEU 71 160 160 LEU LEU B . n B 1 72 GLU 72 161 161 GLU GLU B . n B 1 73 GLU 73 162 162 GLU GLU B . n B 1 74 SER 74 163 163 SER SER B . n B 1 75 ILE 75 164 164 ILE ILE B . n B 1 76 TYR 76 165 165 TYR TYR B . n B 1 77 SER 77 166 166 SER SER B . n B 1 78 TYR 78 167 167 TYR TYR B . n B 1 79 ILE 79 168 168 ILE ILE B . n B 1 80 GLN 80 169 169 GLN GLN B . n B 1 81 ASN 81 170 170 ASN ASN B . n B 1 82 LYS 82 171 171 LYS LYS B . n B 1 83 LEU 83 172 172 LEU LEU B . n B 1 84 GLY 84 173 173 GLY GLY B . n B 1 85 LEU 85 174 174 LEU LEU B . n B 1 86 LYS 86 175 175 LYS LYS B . n B 1 87 VAL 87 176 176 VAL VAL B . n B 1 88 GLY 88 177 177 GLY GLY B . n B 1 89 THR 89 178 178 THR THR B . n B 1 90 SER 90 179 179 SER SER B . n B 1 91 VAL 91 180 180 VAL VAL B . n B 1 92 VAL 92 181 181 VAL VAL B . n B 1 93 ARG 93 182 182 ARG ARG B . n B 1 94 VAL 94 183 183 VAL VAL B . n B 1 95 LYS 95 184 184 LYS LYS B . n B 1 96 GLY 96 185 185 GLY GLY B . n B 1 97 ILE 97 186 186 ILE ILE B . n B 1 98 ARG 98 187 187 ARG ARG B . n B 1 99 PRO 99 188 188 PRO PRO B . n B 1 100 ASP 100 189 189 ASP ASP B . n B 1 101 ASP 101 190 190 ASP ASP B . n B 1 102 LYS 102 191 191 LYS LYS B . n B 1 103 GLU 103 192 192 GLU GLU B . n B 1 104 LYS 104 193 193 LYS LYS B . n B 1 105 GLN 105 194 194 GLN GLN B . n B 1 106 PHE 106 195 195 PHE PHE B . n B 1 107 MSE 107 196 196 MSE MSE B . n B 1 108 ASN 108 197 197 ASN ASN B . n B 1 109 LEU 109 198 198 LEU LEU B . n B 1 110 THR 110 199 199 THR THR B . n B 1 111 ASN 111 200 200 ASN ASN B . n B 1 112 GLN 112 201 201 GLN GLN B . n B 1 113 ASP 113 202 202 ASP ASP B . n B 1 114 PHE 114 203 203 PHE PHE B . n B 1 115 LEU 115 204 204 LEU LEU B . n B 1 116 MSE 116 205 205 MSE MSE B . n B 1 117 ARG 117 206 206 ARG ARG B . n B 1 118 VAL 118 207 207 VAL VAL B . n B 1 119 GLU 119 208 208 GLU GLU B . n B 1 120 GLN 120 209 209 GLN GLN B . n B 1 121 VAL 121 210 210 VAL VAL B . n B 1 122 ALA 122 211 211 ALA ALA B . n B 1 123 TYR 123 212 212 TYR TYR B . n B 1 124 LEU 124 213 213 LEU LEU B . n B 1 125 THR 125 214 214 THR THR B . n B 1 126 ASP 126 215 215 ASP ASP B . n B 1 127 GLY 127 216 216 GLY GLY B . n B 1 128 ARG 128 217 217 ARG ARG B . n B 1 129 THR 129 218 218 THR THR B . n B 1 130 PHE 130 219 219 PHE PHE B . n B 1 131 GLU 131 220 220 GLU GLU B . n B 1 132 TYR 132 221 221 TYR TYR B . n B 1 133 SER 133 222 222 SER SER B . n B 1 134 TYR 134 223 223 TYR TYR B . n B 1 135 ALA 135 224 224 ALA ALA B . n B 1 136 ASP 136 225 225 ASP ASP B . n B 1 137 HIS 137 226 226 HIS HIS B . n B 1 138 LEU 138 227 227 LEU LEU B . n B 1 139 PRO 139 228 228 PRO PRO B . n B 1 140 GLU 140 229 229 GLU GLU B . n B 1 141 THR 141 230 230 THR THR B . n B 1 142 PHE 142 231 231 PHE PHE B . n B 1 143 GLU 143 232 232 GLU GLU B . n B 1 144 PHE 144 233 233 PHE PHE B . n B 1 145 GLU 145 234 234 GLU GLU B . n B 1 146 THR 146 235 235 THR THR B . n B 1 147 VAL 147 236 236 VAL VAL B . n B 1 148 ILE 148 237 237 ILE ILE B . n B 1 149 THR 149 238 238 THR THR B . n B 1 150 ALA 150 239 ? ? ? B . n B 1 151 LYS 151 240 ? ? ? B . n B 1 152 SER 152 241 ? ? ? B . n B 1 153 TYR 153 242 ? ? ? B . n B 1 154 LYS 154 243 ? ? ? B . n B 1 155 GLU 155 244 ? ? ? B . n B 1 156 ALA 156 245 ? ? ? B . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO 1 1 1 EDO EDO B . D 3 PG5 1 246 1 PG5 PG5 B . E 4 HOH 1 2 2 HOH HOH A . E 4 HOH 2 6 6 HOH HOH A . E 4 HOH 3 8 8 HOH HOH A . E 4 HOH 4 10 10 HOH HOH A . E 4 HOH 5 11 11 HOH HOH A . E 4 HOH 6 12 12 HOH HOH A . E 4 HOH 7 13 13 HOH HOH A . E 4 HOH 8 15 15 HOH HOH A . E 4 HOH 9 17 17 HOH HOH A . E 4 HOH 10 18 18 HOH HOH A . E 4 HOH 11 19 19 HOH HOH A . E 4 HOH 12 20 20 HOH HOH A . E 4 HOH 13 21 21 HOH HOH A . E 4 HOH 14 22 22 HOH HOH A . E 4 HOH 15 23 23 HOH HOH A . E 4 HOH 16 26 26 HOH HOH A . E 4 HOH 17 28 28 HOH HOH A . E 4 HOH 18 30 30 HOH HOH A . E 4 HOH 19 32 32 HOH HOH A . E 4 HOH 20 33 33 HOH HOH A . E 4 HOH 21 34 34 HOH HOH A . E 4 HOH 22 37 37 HOH HOH A . E 4 HOH 23 39 39 HOH HOH A . E 4 HOH 24 40 40 HOH HOH A . E 4 HOH 25 41 41 HOH HOH A . E 4 HOH 26 42 42 HOH HOH A . E 4 HOH 27 44 44 HOH HOH A . E 4 HOH 28 45 45 HOH HOH A . E 4 HOH 29 48 48 HOH HOH A . E 4 HOH 30 49 49 HOH HOH A . E 4 HOH 31 50 50 HOH HOH A . F 4 HOH 1 3 3 HOH HOH B . F 4 HOH 2 4 4 HOH HOH B . F 4 HOH 3 5 5 HOH HOH B . F 4 HOH 4 7 7 HOH HOH B . F 4 HOH 5 9 9 HOH HOH B . F 4 HOH 6 14 14 HOH HOH B . F 4 HOH 7 24 24 HOH HOH B . F 4 HOH 8 25 25 HOH HOH B . F 4 HOH 9 27 27 HOH HOH B . F 4 HOH 10 29 29 HOH HOH B . F 4 HOH 11 31 31 HOH HOH B . F 4 HOH 12 35 35 HOH HOH B . F 4 HOH 13 36 36 HOH HOH B . F 4 HOH 14 38 38 HOH HOH B . F 4 HOH 15 43 43 HOH HOH B . F 4 HOH 16 46 46 HOH HOH B . F 4 HOH 17 47 47 HOH HOH B . F 4 HOH 18 247 1 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 53 A MSE 142 ? MET SELENOMETHIONINE 2 A MSE 58 A MSE 147 ? MET SELENOMETHIONINE 3 A MSE 107 A MSE 196 ? MET SELENOMETHIONINE 4 A MSE 116 A MSE 205 ? MET SELENOMETHIONINE 5 B MSE 53 B MSE 142 ? MET SELENOMETHIONINE 6 B MSE 58 B MSE 147 ? MET SELENOMETHIONINE 7 B MSE 107 B MSE 196 ? MET SELENOMETHIONINE 8 B MSE 116 B MSE 205 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2410 ? 1 MORE -3 ? 1 'SSA (A^2)' 15360 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-01-05 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Refinement description' 3 2 'Structure model' 'Version format compliance' 4 3 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 34.9115 89.6464 42.6946 0.1105 0.2192 0.1825 0.0595 0.0123 -0.0333 8.0145 9.0892 4.5624 1.6178 -0.5393 -0.3984 0.2746 -0.5126 0.2380 -0.5115 1.0303 0.6160 0.0121 -0.6540 -0.0724 'X-RAY DIFFRACTION' 2 ? refined 40.9257 70.1955 34.7758 0.0972 0.0644 0.1435 0.0310 0.0024 -0.0369 14.2974 15.6025 9.1115 4.9374 3.7465 1.6383 0.1700 0.2755 -0.4455 0.7438 -1.0357 -0.1907 -0.9738 0.2108 0.6379 'X-RAY DIFFRACTION' 3 ? refined 39.9501 88.1289 41.4402 0.0349 0.1545 0.1484 -0.0069 -0.0448 -0.0831 3.7714 22.1658 4.1283 7.1532 -0.8520 1.2583 0.1682 -0.4266 0.2584 -0.5550 0.1738 0.0888 0.0215 -0.3376 0.1293 'X-RAY DIFFRACTION' 4 ? refined 34.3605 77.2323 51.9516 0.1223 0.2467 0.0985 0.0455 0.0431 0.0687 3.6721 12.2612 0.2108 -1.4263 0.9062 0.0075 -0.2654 0.2278 0.0376 -0.7813 -0.0887 -0.4311 0.7831 0.0129 -0.1546 'X-RAY DIFFRACTION' 5 ? refined 50.9987 79.2811 42.9265 0.1357 0.3741 0.2639 -0.0201 -0.0663 -0.0249 1.9423 4.8814 1.5325 -0.6102 0.2733 -2.9200 -0.0790 -0.2471 0.3261 -0.3132 -0.0348 -0.6926 -0.2249 0.1472 0.2138 'X-RAY DIFFRACTION' 6 ? refined 44.8848 94.3530 29.4204 0.0639 0.1034 0.1312 -0.0101 -0.0219 0.0211 14.9078 10.0349 10.1856 -5.9055 0.1265 -1.5094 0.2367 -0.0399 -0.1968 0.2916 0.0037 0.5030 -0.1675 -0.2460 -0.8838 'X-RAY DIFFRACTION' 7 ? refined 47.1140 78.7045 43.2231 0.0710 0.2245 0.2052 0.0763 -0.0360 0.0601 2.1520 8.4828 0.1207 0.4145 0.7349 0.4516 -0.2098 0.2911 -0.0813 -0.1795 -0.3082 -0.4709 0.2876 -0.0154 0.0620 'X-RAY DIFFRACTION' 8 ? refined 58.8068 90.6681 46.3636 0.0833 0.4087 0.4310 -0.1711 -0.0541 0.0093 16.3575 10.0671 27.4935 -9.1987 20.9383 -12.7410 -0.3759 -0.3943 0.7701 0.1668 0.1312 -0.0913 0.6118 -0.7438 0.4767 'X-RAY DIFFRACTION' 9 ? refined 80.0961 87.0247 30.9268 0.1773 0.3882 0.2621 0.1142 0.0234 -0.0833 10.7914 11.6858 11.9247 6.2152 7.2011 7.0397 -0.0923 -0.0732 0.1655 1.2915 -0.5979 0.1670 -0.8093 0.5394 0.9832 'X-RAY DIFFRACTION' 10 ? refined 77.5254 102.3373 46.0194 0.1026 0.0884 0.1569 0.0556 0.0227 -0.0736 20.5784 16.7906 5.5657 5.0502 -0.2979 0.1412 0.4361 -0.2172 -0.2189 -0.5165 1.6910 0.5904 -0.0453 -0.5912 -0.1336 'X-RAY DIFFRACTION' 11 ? refined 75.3163 88.1708 33.4827 0.0292 0.2223 0.2296 -0.0283 0.0376 -0.1042 6.5432 1.6841 4.5237 1.3236 5.5519 1.1556 0.2552 0.0767 -0.3319 0.4629 -0.4718 -0.2020 -0.0301 0.2190 0.3570 'X-RAY DIFFRACTION' 12 ? refined 85.6545 84.2987 45.0978 0.1113 0.1283 0.1063 -0.0361 0.0193 -0.0361 5.4256 5.7582 12.2331 0.6080 2.8024 -3.2907 -0.1014 0.0145 0.0869 0.4402 -0.2215 -0.3120 -0.2571 1.0694 -0.0775 'X-RAY DIFFRACTION' 13 ? refined 67.5872 89.8380 45.6955 0.3999 0.3904 0.3817 0.0516 -0.0023 0.0618 0.2941 0.0359 7.8617 0.9229 2.6006 2.4419 -0.4616 -0.1517 0.6133 -0.4093 0.1483 0.1498 -0.0592 -0.9174 -0.9140 'X-RAY DIFFRACTION' 14 ? refined 66.1025 95.0243 24.8459 0.1182 0.2045 0.0525 -0.0928 0.0166 0.0274 26.4092 19.5046 16.0467 -1.2632 -7.2228 0.6438 0.2131 0.0422 -0.2553 1.3479 0.8504 -0.5243 -0.5579 -1.3009 0.8185 'X-RAY DIFFRACTION' 15 ? refined 71.3526 90.3884 44.6541 0.0707 0.2706 0.2132 0.0040 -0.0170 -0.0224 0.2715 1.0116 0.7319 -0.5320 0.5154 -1.0031 -0.1422 0.1588 -0.0166 -0.0730 0.0041 0.1386 0.2458 -0.2414 -0.0885 'X-RAY DIFFRACTION' 16 ? refined 58.9738 80.1712 39.8696 0.1110 0.1548 0.3413 0.0491 -0.0969 -0.0474 8.1680 10.1585 15.7932 2.5721 -1.0759 -13.3994 0.5996 -0.0419 -0.5577 -0.1224 -0.1754 0.4678 -0.1056 0.3025 0.1488 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 96 A 108 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 A 109 A 125 ? . . . . ? 'X-RAY DIFFRACTION' 3 3 A 126 A 148 ? . . . . ? 'X-RAY DIFFRACTION' 4 4 A 149 A 173 ? . . . . ? 'X-RAY DIFFRACTION' 5 5 A 174 A 187 ? . . . . ? 'X-RAY DIFFRACTION' 6 6 A 188 A 203 ? . . . . ? 'X-RAY DIFFRACTION' 7 7 A 204 A 227 ? . . . . ? 'X-RAY DIFFRACTION' 8 8 A 228 A 238 ? . . . . ? 'X-RAY DIFFRACTION' 9 9 B 96 B 108 ? . . . . ? 'X-RAY DIFFRACTION' 10 10 B 109 B 125 ? . . . . ? 'X-RAY DIFFRACTION' 11 11 B 126 B 148 ? . . . . ? 'X-RAY DIFFRACTION' 12 12 B 149 B 173 ? . . . . ? 'X-RAY DIFFRACTION' 13 13 B 174 B 187 ? . . . . ? 'X-RAY DIFFRACTION' 14 14 B 188 B 203 ? . . . . ? 'X-RAY DIFFRACTION' 15 15 B 204 B 227 ? . . . . ? 'X-RAY DIFFRACTION' 16 16 B 228 B 238 ? . . . . ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SBC-Collect 'data collection' . ? 1 HKL-3000 phasing . ? 2 SHELXD phasing . ? 3 SHELXE 'model building' . ? 4 MLPHARE phasing . ? 5 DM 'model building' . ? 6 RESOLVE 'model building' . ? 7 Coot 'model building' . ? 8 ARP/wARP 'model building' . ? 9 REFMAC refinement 5.5.0102 ? 10 HKL-3000 'data reduction' . ? 11 HKL-3000 'data scaling' . ? 12 DM phasing . ? 13 RESOLVE phasing . ? 14 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 97 ? ? -64.47 11.36 2 1 SER A 137 ? ? 76.96 -4.52 3 1 GLU B 162 ? ? 80.41 55.44 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 90 ? A SER 1 2 1 Y 1 A ASN 91 ? A ASN 2 3 1 Y 1 A ALA 92 ? A ALA 3 4 1 Y 1 A VAL 93 ? A VAL 4 5 1 Y 1 A TYR 94 ? A TYR 5 6 1 Y 1 A GLY 95 ? A GLY 6 7 1 Y 1 A ALA 239 ? A ALA 150 8 1 Y 1 A LYS 240 ? A LYS 151 9 1 Y 1 A SER 241 ? A SER 152 10 1 Y 1 A TYR 242 ? A TYR 153 11 1 Y 1 A LYS 243 ? A LYS 154 12 1 Y 1 A GLU 244 ? A GLU 155 13 1 Y 1 A ALA 245 ? A ALA 156 14 1 Y 1 B SER 90 ? B SER 1 15 1 Y 1 B ASN 91 ? B ASN 2 16 1 Y 1 B ALA 92 ? B ALA 3 17 1 Y 1 B VAL 93 ? B VAL 4 18 1 Y 1 B TYR 94 ? B TYR 5 19 1 Y 1 B GLY 95 ? B GLY 6 20 1 Y 1 B ALA 239 ? B ALA 150 21 1 Y 1 B LYS 240 ? B LYS 151 22 1 Y 1 B SER 241 ? B SER 152 23 1 Y 1 B TYR 242 ? B TYR 153 24 1 Y 1 B LYS 243 ? B LYS 154 25 1 Y 1 B GLU 244 ? B GLU 155 26 1 Y 1 B ALA 245 ? B ALA 156 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1,2-ETHANEDIOL EDO 3 '1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE' PG5 4 water HOH #