HEADER GLYCINE BETAINE-BINDING PROTEIN 23-DEC-09 3L6H TITLE CRYSTAL STRUCTURE OF LACTOCOCCAL OPUAC IN ITS CLOSED-LIGANDED TITLE 2 CONFORMATION COMPLEXED WITH GLYCINE BETAINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETAINE ABC TRANSPORTER PERMEASE AND SUBSTRATE BINDING COMPND 3 PROTEIN; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: SUBSTRATE BINDING DOMAIN (UNP RESIDUES 320-573); COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LACTOCOCCUS LACTIS; SOURCE 3 ORGANISM_COMMON: STREPTOCOCCUS LACTIS; SOURCE 4 ORGANISM_TAXID: 1358; SOURCE 5 STRAIN: NZ9000; SOURCE 6 GENE: BUSAB, LL1451, L724, L72477; SOURCE 7 EXPRESSION_SYSTEM: LACTOCOCCUS LACTIS; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 1358; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: NZ9000; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PNZ9000 KEYWDS GLYCINE BETAINE BINDING, SUBSTRATE BINDING DOMAIN, VENUS FLY-TRAP, KEYWDS 2 CELL MEMBRANE, MEMBRANE, TRANSMEMBRANE, TRANSPORT, GLYCINE BETAINE- KEYWDS 3 BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.P.A.BERNTSSON,J.C.WOLTERS,N.GUL,A.KARASAWA,A.M.W.H.THUNNISSEN, AUTHOR 2 D.J.SLOTBOOM,B.POOLMAN REVDAT 3 15-NOV-23 3L6H 1 ATOM REVDAT 2 06-SEP-23 3L6H 1 REMARK SEQADV REVDAT 1 19-MAY-10 3L6H 0 JRNL AUTH J.C.WOLTERS,R.P.BERNTSSON,N.GUL,A.KARASAWA,A.M.THUNNISSEN, JRNL AUTH 2 D.J.SLOTBOOM,B.POOLMAN JRNL TITL LIGAND BINDING AND CRYSTAL STRUCTURES OF THE JRNL TITL 2 SUBSTRATE-BINDING DOMAIN OF THE ABC TRANSPORTER OPUA. JRNL REF PLOS ONE V. 5 10361 2010 JRNL REFN ESSN 1932-6203 JRNL PMID 20454456 JRNL DOI 10.1371/JOURNAL.PONE.0010361 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.78 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 15560 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 819 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1137 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2170 REMARK 3 BIN FREE R VALUE SET COUNT : 59 REMARK 3 BIN FREE R VALUE : 0.2600 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1995 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 140 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 34.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.05000 REMARK 3 B22 (A**2) : -1.05000 REMARK 3 B33 (A**2) : 1.58000 REMARK 3 B12 (A**2) : -0.53000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.257 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.193 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.127 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.237 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.933 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.911 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2056 ; 0.005 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1356 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2788 ; 0.898 ; 1.938 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3355 ; 0.778 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 255 ; 4.907 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 87 ;38.819 ;26.667 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 372 ;11.858 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 1 ; 9.882 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 306 ; 0.052 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2260 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 363 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1274 ; 0.220 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 519 ; 0.032 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2051 ; 0.438 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 782 ; 0.700 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 737 ; 1.165 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -10 A 9999 REMARK 3 ORIGIN FOR THE GROUP (A): 16.9555 -6.4325 47.3776 REMARK 3 T TENSOR REMARK 3 T11: 0.0136 T22: 0.0503 REMARK 3 T33: 0.0822 T12: 0.0198 REMARK 3 T13: 0.0065 T23: 0.0015 REMARK 3 L TENSOR REMARK 3 L11: 1.1253 L22: 1.1435 REMARK 3 L33: 1.8801 L12: 0.1362 REMARK 3 L13: 0.0608 L23: 0.4615 REMARK 3 S TENSOR REMARK 3 S11: 0.0052 S12: 0.1523 S13: 0.0042 REMARK 3 S21: 0.0061 S22: 0.0201 S23: -0.0325 REMARK 3 S31: 0.0448 S32: 0.0148 S33: -0.0252 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3L6H COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-JAN-10. REMARK 100 THE DEPOSITION ID IS D_1000056893. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-MAR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.872 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XSCALE REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16390 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 46.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.11400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.7100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.33 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.66600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.1.4 REMARK 200 STARTING MODEL: PDB CODE 3L6G REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M NACL, 0.1 M NA-HEPES, PH 7.0, REMARK 280 20% PEG 6000, 1 MM GLYCINE BETAINE, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 55.85300 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 32.24674 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 50.57600 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 55.85300 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 32.24674 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 50.57600 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 55.85300 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 32.24674 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 50.57600 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 55.85300 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 32.24674 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 50.57600 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 55.85300 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 32.24674 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 50.57600 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 55.85300 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 32.24674 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 50.57600 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 64.49349 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 101.15200 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 64.49349 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 101.15200 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 64.49349 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 101.15200 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 64.49349 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 101.15200 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 64.49349 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 101.15200 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 64.49349 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 101.15200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 58 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 574 REMARK 465 SER A 575 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 422 -81.55 -130.38 REMARK 500 ILE A 432 -152.86 -106.27 REMARK 500 SER A 460 -109.78 -146.59 REMARK 500 THR A 507 -34.10 -130.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BET A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 576 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 577 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3L6G RELATED DB: PDB DBREF 3L6H A 320 573 UNP Q7DAU8 Q7DAU8_LACLA 320 573 SEQADV 3L6H GLY A 574 UNP Q7DAU8 EXPRESSION TAG SEQADV 3L6H SER A 575 UNP Q7DAU8 EXPRESSION TAG SEQRES 1 A 256 ASP LYS LYS VAL ASP LEU VAL TYR MET ASN TRP ASP SER SEQRES 2 A 256 GLU VAL ALA SER ILE ASN VAL LEU THR GLN ALA MET LYS SEQRES 3 A 256 GLU HIS GLY PHE ASP VAL LYS THR THR ALA LEU ASP ASN SEQRES 4 A 256 ALA VAL ALA TRP GLN THR VAL ALA ASN GLY GLN ALA ASP SEQRES 5 A 256 GLY MET VAL SER ALA TRP LEU PRO ASN THR HIS LYS THR SEQRES 6 A 256 GLN TRP GLN LYS TYR GLY LYS SER VAL ASP LEU LEU GLY SEQRES 7 A 256 PRO ASN LEU LYS GLY ALA LYS VAL GLY PHE VAL VAL PRO SEQRES 8 A 256 SER TYR MET ASN VAL ASN SER ILE GLU ASP LEU THR ASN SEQRES 9 A 256 GLN ALA ASN LYS THR ILE THR GLY ILE GLU PRO GLY ALA SEQRES 10 A 256 GLY VAL MET ALA ALA SER GLU LYS THR LEU ASN SER TYR SEQRES 11 A 256 ASP ASN LEU LYS ASP TRP LYS LEU VAL PRO SER SER SER SEQRES 12 A 256 GLY ALA MET THR VAL ALA LEU GLY GLU ALA ILE LYS GLN SEQRES 13 A 256 HIS LYS ASP ILE VAL ILE THR GLY TRP SER PRO HIS TRP SEQRES 14 A 256 MET PHE ASN LYS TYR ASP LEU LYS TYR LEU ALA ASP PRO SEQRES 15 A 256 LYS GLY THR MET GLY THR SER GLU ASN ILE ASN THR ILE SEQRES 16 A 256 VAL ARG LYS GLY LEU LYS LYS GLU ASN PRO GLU ALA TYR SEQRES 17 A 256 LYS VAL LEU ASP LYS PHE ASN TRP THR THR LYS ASP MET SEQRES 18 A 256 GLU ALA VAL MET LEU ASP ILE GLN ASN GLY LYS THR PRO SEQRES 19 A 256 GLU GLU ALA ALA LYS ASN TRP ILE LYS ASP HIS GLN LYS SEQRES 20 A 256 GLU VAL ASP LYS TRP PHE LYS GLY SER HET BET A 1 8 HET CL A 576 1 HET CL A 577 1 HETNAM BET TRIMETHYL GLYCINE HETNAM CL CHLORIDE ION FORMUL 2 BET C5 H12 N O2 1+ FORMUL 3 CL 2(CL 1-) FORMUL 5 HOH *140(H2 O) HELIX 1 1 TRP A 330 HIS A 347 1 18 HELIX 2 2 ASP A 357 ASN A 367 1 11 HELIX 3 3 HIS A 382 GLY A 390 1 9 HELIX 4 4 SER A 417 LEU A 421 5 5 HELIX 5 5 ASN A 423 ASN A 426 5 4 HELIX 6 6 ALA A 436 TYR A 449 1 14 HELIX 7 7 ASP A 450 LYS A 453 5 4 HELIX 8 8 SER A 461 HIS A 476 1 16 HELIX 9 9 HIS A 487 LYS A 492 5 6 HELIX 10 10 GLY A 518 ASN A 523 1 6 HELIX 11 11 ASN A 523 PHE A 533 1 11 HELIX 12 12 THR A 536 ASN A 549 1 14 HELIX 13 13 THR A 552 HIS A 564 1 13 HELIX 14 14 HIS A 564 LYS A 570 1 7 HELIX 15 15 TRP A 571 LYS A 573 5 3 SHEET 1 A 2 LYS A 322 TYR A 327 0 SHEET 2 A 2 ASP A 350 ALA A 355 1 O LYS A 352 N LEU A 325 SHEET 1 B 4 GLY A 372 LEU A 378 0 SHEET 2 B 4 GLU A 509 ARG A 516 -1 O ASN A 512 N ALA A 376 SHEET 3 B 4 VAL A 393 PRO A 410 -1 N ASN A 399 O ILE A 511 SHEET 4 B 4 ILE A 481 SER A 485 -1 O SER A 485 N LYS A 404 SHEET 1 C 4 GLY A 372 LEU A 378 0 SHEET 2 C 4 GLU A 509 ARG A 516 -1 O ASN A 512 N ALA A 376 SHEET 3 C 4 VAL A 393 PRO A 410 -1 N ASN A 399 O ILE A 511 SHEET 4 C 4 LEU A 495 TYR A 497 -1 O LYS A 496 N VAL A 409 SHEET 1 D 2 THR A 428 THR A 430 0 SHEET 2 D 2 LYS A 456 VAL A 458 1 O VAL A 458 N ILE A 429 CISPEP 1 LEU A 378 PRO A 379 0 3.78 CISPEP 2 SER A 485 PRO A 486 0 2.84 SITE 1 AC1 8 TRP A 330 TRP A 377 THR A 381 HIS A 382 SITE 2 AC1 8 ILE A 432 GLY A 437 VAL A 438 TRP A 484 SITE 1 AC2 5 HOH A 136 ASN A 358 THR A 381 GLN A 385 SITE 2 AC2 5 GLY A 437 SITE 1 AC3 6 HOH A 29 HOH A 137 LEU A 396 GLY A 397 SITE 2 AC3 6 PRO A 398 ASP A 531 CRYST1 111.706 111.706 151.728 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008952 0.005168 0.000000 0.00000 SCALE2 0.000000 0.010337 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006591 0.00000