data_3L85 # _entry.id 3L85 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3L85 pdb_00003l85 10.2210/pdb3l85/pdb RCSB RCSB056953 ? ? WWPDB D_1000056953 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3AC9 'The same protein in complex with 8-oxo-dGDP and manganese' unspecified PDB 3ACA 'The same protein in complex with 8-oxo-dADP and manganese' unspecified # _pdbx_database_status.entry_id 3L85 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2009-12-29 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Arimori, T.' 1 'Yamagata, Y.' 2 # _citation.id primary _citation.title 'Diverse substrate recognition and hydrolysis mechanisms of human NUDT5' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 39 _citation.page_first 8972 _citation.page_last 8983 _citation.year 2011 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21768126 _citation.pdbx_database_id_DOI 10.1093/nar/gkr575 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Arimori, T.' 1 ? primary 'Tamaoki, H.' 2 ? primary 'Nakamura, T.' 3 ? primary 'Kamiya, H.' 4 ? primary 'Ikemizu, S.' 5 ? primary 'Takagi, Y.' 6 ? primary 'Ishibashi, T.' 7 ? primary 'Harashima, H.' 8 ? primary 'Sekiguchi, M.' 9 ? primary 'Yamagata, Y.' 10 ? # _cell.entry_id 3L85 _cell.length_a 112.655 _cell.length_b 40.008 _cell.length_c 98.470 _cell.angle_alpha 90.00 _cell.angle_beta 121.53 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3L85 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'ADP-sugar pyrophosphatase' 21643.592 2 3.6.1.13 ? 'residues 14-208' ? 2 non-polymer syn "8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" 363.221 2 ? ? ? ? 3 water nat water 18.015 75 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'NUDT5, Nucleoside diphosphate-linked moiety X motif 5, Nudix motif 5, YSA1H' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;KQYIISEELISEGKWVKLEKTTYMDPTGKTRTWESVKRTTRKEQTADGVAVIPVLQRTLHYECIVLVKQFRPPMGGYCIE FPAGLIDDGETPEAAALRELEEETGYKGDIAECSPAVCMDPGLSNCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISL PKNDLLQRLDALVAEEHLTVDARVYSYALALKHAN ; _entity_poly.pdbx_seq_one_letter_code_can ;KQYIISEELISEGKWVKLEKTTYMDPTGKTRTWESVKRTTRKEQTADGVAVIPVLQRTLHYECIVLVKQFRPPMGGYCIE FPAGLIDDGETPEAAALRELEEETGYKGDIAECSPAVCMDPGLSNCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISL PKNDLLQRLDALVAEEHLTVDARVYSYALALKHAN ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 GLN n 1 3 TYR n 1 4 ILE n 1 5 ILE n 1 6 SER n 1 7 GLU n 1 8 GLU n 1 9 LEU n 1 10 ILE n 1 11 SER n 1 12 GLU n 1 13 GLY n 1 14 LYS n 1 15 TRP n 1 16 VAL n 1 17 LYS n 1 18 LEU n 1 19 GLU n 1 20 LYS n 1 21 THR n 1 22 THR n 1 23 TYR n 1 24 MET n 1 25 ASP n 1 26 PRO n 1 27 THR n 1 28 GLY n 1 29 LYS n 1 30 THR n 1 31 ARG n 1 32 THR n 1 33 TRP n 1 34 GLU n 1 35 SER n 1 36 VAL n 1 37 LYS n 1 38 ARG n 1 39 THR n 1 40 THR n 1 41 ARG n 1 42 LYS n 1 43 GLU n 1 44 GLN n 1 45 THR n 1 46 ALA n 1 47 ASP n 1 48 GLY n 1 49 VAL n 1 50 ALA n 1 51 VAL n 1 52 ILE n 1 53 PRO n 1 54 VAL n 1 55 LEU n 1 56 GLN n 1 57 ARG n 1 58 THR n 1 59 LEU n 1 60 HIS n 1 61 TYR n 1 62 GLU n 1 63 CYS n 1 64 ILE n 1 65 VAL n 1 66 LEU n 1 67 VAL n 1 68 LYS n 1 69 GLN n 1 70 PHE n 1 71 ARG n 1 72 PRO n 1 73 PRO n 1 74 MET n 1 75 GLY n 1 76 GLY n 1 77 TYR n 1 78 CYS n 1 79 ILE n 1 80 GLU n 1 81 PHE n 1 82 PRO n 1 83 ALA n 1 84 GLY n 1 85 LEU n 1 86 ILE n 1 87 ASP n 1 88 ASP n 1 89 GLY n 1 90 GLU n 1 91 THR n 1 92 PRO n 1 93 GLU n 1 94 ALA n 1 95 ALA n 1 96 ALA n 1 97 LEU n 1 98 ARG n 1 99 GLU n 1 100 LEU n 1 101 GLU n 1 102 GLU n 1 103 GLU n 1 104 THR n 1 105 GLY n 1 106 TYR n 1 107 LYS n 1 108 GLY n 1 109 ASP n 1 110 ILE n 1 111 ALA n 1 112 GLU n 1 113 CYS n 1 114 SER n 1 115 PRO n 1 116 ALA n 1 117 VAL n 1 118 CYS n 1 119 MET n 1 120 ASP n 1 121 PRO n 1 122 GLY n 1 123 LEU n 1 124 SER n 1 125 ASN n 1 126 CYS n 1 127 THR n 1 128 ILE n 1 129 HIS n 1 130 ILE n 1 131 VAL n 1 132 THR n 1 133 VAL n 1 134 THR n 1 135 ILE n 1 136 ASN n 1 137 GLY n 1 138 ASP n 1 139 ASP n 1 140 ALA n 1 141 GLU n 1 142 ASN n 1 143 ALA n 1 144 ARG n 1 145 PRO n 1 146 LYS n 1 147 PRO n 1 148 LYS n 1 149 PRO n 1 150 GLY n 1 151 ASP n 1 152 GLY n 1 153 GLU n 1 154 PHE n 1 155 VAL n 1 156 GLU n 1 157 VAL n 1 158 ILE n 1 159 SER n 1 160 LEU n 1 161 PRO n 1 162 LYS n 1 163 ASN n 1 164 ASP n 1 165 LEU n 1 166 LEU n 1 167 GLN n 1 168 ARG n 1 169 LEU n 1 170 ASP n 1 171 ALA n 1 172 LEU n 1 173 VAL n 1 174 ALA n 1 175 GLU n 1 176 GLU n 1 177 HIS n 1 178 LEU n 1 179 THR n 1 180 VAL n 1 181 ASP n 1 182 ALA n 1 183 ARG n 1 184 VAL n 1 185 TYR n 1 186 SER n 1 187 TYR n 1 188 ALA n 1 189 LEU n 1 190 ALA n 1 191 LEU n 1 192 LYS n 1 193 HIS n 1 194 ALA n 1 195 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'NUDT5, HSPC115' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pET28b(+)' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NUDT5_HUMAN _struct_ref.pdbx_db_accession Q9UKK9 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KQYIISEELISEGKWVKLEKTTYMDPTGKTRTWESVKRTTRKEQTADGVAVIPVLQRTLHYECIVLVKQFRPPMGGYCIE FPAGLIDDGETPEAAALRELEEETGYKGDIAECSPAVCMDPGLSNCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISL PKNDLLQRLDALVAEEHLTVDARVYSYALALKHAN ; _struct_ref.pdbx_align_begin 14 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3L85 A 1 ? 195 ? Q9UKK9 14 ? 208 ? 14 208 2 1 3L85 B 1 ? 195 ? Q9UKK9 14 ? 208 ? 14 208 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 8OG 'DNA linking' n "8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" "8-OXO-7,8-DIHYDRO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" 'C10 H14 N5 O8 P' 363.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3L85 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.density_Matthews 2.18 _exptl_crystal.density_diffrn ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_percent_sol 43.70 _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 4.5 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '0.1M Sodium Acetate, 0.8M NaH2PO4/1.2M K2HPO4 , pH 4.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'Bruker DIP-6040' _diffrn_detector.pdbx_collection_date 2007-04-09 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL44XU' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9 _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL44XU # _reflns.entry_id 3L85 _reflns.B_iso_Wilson_estimate 33.770 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 2.3 _reflns.d_resolution_low 50 _reflns.number_all 15339 _reflns.number_obs 15339 _reflns.percent_possible_obs 90.8 _reflns.pdbx_Rmerge_I_obs 0.080 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 15.8 _reflns.pdbx_redundancy 2.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.30 _reflns_shell.d_res_low 2.38 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 64.9 _reflns_shell.Rmerge_I_obs 0.426 _reflns_shell.meanI_over_sigI_obs 1.75 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy 1.8 _reflns_shell.number_unique_all 1071 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3L85 _refine.ls_d_res_high 2.301 _refine.ls_d_res_low 45.523 _refine.pdbx_ls_sigma_F 0.06 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 82.970 _refine.ls_number_reflns_obs 14057 _refine.ls_number_reflns_all 15339 _refine.ls_number_reflns_R_work 13351 _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.217 _refine.ls_R_factor_R_work 0.215 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.261 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.020 _refine.ls_number_reflns_R_free 706 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 43.528 _refine.solvent_model_param_bsol 43.467 _refine.solvent_model_param_ksol 0.393 _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -9.849 _refine.aniso_B[2][2] 7.774 _refine.aniso_B[3][3] 2.075 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] -2.184 _refine.aniso_B[2][3] -0.000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 2.040 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.110 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.900 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'PDB ENTRY 2DSC' _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.762 _refine.B_iso_max 89.03 _refine.B_iso_min 21.50 _refine.occupancy_max 1.00 _refine.occupancy_min 1.00 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error 29.960 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3034 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 37 _refine_hist.number_atoms_solvent 75 _refine_hist.number_atoms_total 3146 _refine_hist.d_res_high 2.301 _refine_hist.d_res_low 45.523 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 3132 0.003 ? ? 'X-RAY DIFFRACTION' ? f_angle_d 4263 0.621 ? ? 'X-RAY DIFFRACTION' ? f_chiral_restr 485 0.038 ? ? 'X-RAY DIFFRACTION' ? f_plane_restr 550 0.002 ? ? 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 1165 15.677 ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 2.301 2.478 5 57.000 1800 . 0.298 0.327 . 97 . 1897 . . 'X-RAY DIFFRACTION' 2.478 2.728 5 75.000 2369 . 0.284 0.363 . 137 . 2506 . . 'X-RAY DIFFRACTION' 2.728 3.122 5 89.000 2840 . 0.249 0.340 . 144 . 2984 . . 'X-RAY DIFFRACTION' 3.122 3.934 5 96.000 3121 . 0.203 0.239 . 150 . 3271 . . 'X-RAY DIFFRACTION' 3.934 45.532 5 97.000 3221 . 0.182 0.216 . 178 . 3399 . . 'X-RAY DIFFRACTION' # _struct.entry_id 3L85 _struct.title 'Crystal structure of human NUDT5 complexed with 8-oxo-dGMP' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3L85 _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' _struct_keywords.text 'Nudix motif, Magnesium, HYDROLASE-HYDROLASE INHIBITOR complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 72 ? GLY A 75 ? PRO A 85 GLY A 88 5 ? 4 HELX_P HELX_P2 2 THR A 91 ? GLY A 105 ? THR A 104 GLY A 118 1 ? 15 HELX_P HELX_P3 3 ASP A 139 ? ALA A 143 ? ASP A 152 ALA A 156 5 ? 5 HELX_P HELX_P4 4 ASP A 164 ? GLU A 176 ? ASP A 177 GLU A 189 1 ? 13 HELX_P HELX_P5 5 ALA A 182 ? ASN A 195 ? ALA A 195 ASN A 208 1 ? 14 HELX_P HELX_P6 6 PRO B 72 ? GLY B 75 ? PRO B 85 GLY B 88 5 ? 4 HELX_P HELX_P7 7 THR B 91 ? THR B 104 ? THR B 104 THR B 117 1 ? 14 HELX_P HELX_P8 8 ASP B 139 ? ALA B 143 ? ASP B 152 ALA B 156 5 ? 5 HELX_P HELX_P9 9 ASP B 164 ? GLU B 176 ? ASP B 177 GLU B 189 1 ? 13 HELX_P HELX_P10 10 ASP B 181 ? ASN B 195 ? ASP B 194 ASN B 208 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 9 ? C ? 4 ? D ? 5 ? E ? 5 ? F ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? parallel B 6 7 ? parallel B 7 8 ? anti-parallel B 8 9 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? parallel D 3 4 ? anti-parallel D 4 5 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel E 4 5 ? parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 3 ? GLU A 12 ? TYR A 16 GLU A 25 A 2 VAL A 16 ? MET A 24 ? VAL A 29 MET A 37 A 3 THR A 30 ? ARG A 38 ? THR A 43 ARG A 51 B 1 ASP A 109 ? CYS A 118 ? ASP A 122 CYS A 131 B 2 THR A 127 ? ASN A 136 ? THR A 140 ASN A 149 B 3 GLY A 48 ? GLN A 56 ? GLY A 61 GLN A 69 B 4 CYS A 63 ? ARG A 71 ? CYS A 76 ARG A 84 B 5 GLY A 76 ? GLU A 80 ? GLY A 89 GLU A 93 B 6 THR A 179 ? ASP A 181 ? THR A 192 ASP A 194 B 7 VAL B 117 ? CYS B 118 ? VAL B 130 CYS B 131 B 8 THR B 127 ? ASN B 136 ? THR B 140 ASN B 149 B 9 ASP B 109 ? CYS B 113 ? ASP B 122 CYS B 126 C 1 ALA A 83 ? LEU A 85 ? ALA A 96 LEU A 98 C 2 GLY A 48 ? GLN A 56 ? GLY A 61 GLN A 69 C 3 CYS A 63 ? ARG A 71 ? CYS A 76 ARG A 84 C 4 GLU A 156 ? PRO A 161 ? GLU A 169 PRO A 174 D 1 ASP B 109 ? CYS B 113 ? ASP B 122 CYS B 126 D 2 THR B 127 ? ASN B 136 ? THR B 140 ASN B 149 D 3 GLY B 48 ? GLN B 56 ? GLY B 61 GLN B 69 D 4 CYS B 63 ? ARG B 71 ? CYS B 76 ARG B 84 D 5 GLU B 156 ? PRO B 161 ? GLU B 169 PRO B 174 E 1 ALA B 83 ? LEU B 85 ? ALA B 96 LEU B 98 E 2 GLY B 48 ? GLN B 56 ? GLY B 61 GLN B 69 E 3 CYS B 63 ? ARG B 71 ? CYS B 76 ARG B 84 E 4 GLY B 76 ? GLU B 80 ? GLY B 89 GLU B 93 E 5 THR B 179 ? VAL B 180 ? THR B 192 VAL B 193 F 1 TYR B 3 ? GLU B 12 ? TYR B 16 GLU B 25 F 2 VAL B 16 ? MET B 24 ? VAL B 29 MET B 37 F 3 THR B 30 ? ARG B 38 ? THR B 43 ARG B 51 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 5 ? N ILE A 18 O THR A 22 ? O THR A 35 A 2 3 N THR A 21 ? N THR A 34 O TRP A 33 ? O TRP A 46 B 1 2 N ALA A 111 ? N ALA A 124 O THR A 132 ? O THR A 145 B 2 3 O ILE A 135 ? O ILE A 148 N GLN A 56 ? N GLN A 69 B 3 4 N LEU A 55 ? N LEU A 68 O CYS A 63 ? O CYS A 76 B 4 5 N ARG A 71 ? N ARG A 84 O GLY A 76 ? O GLY A 89 B 5 6 N ILE A 79 ? N ILE A 92 O ASP A 181 ? O ASP A 194 B 6 7 N VAL A 180 ? N VAL A 193 O CYS B 118 ? O CYS B 131 B 7 8 N VAL B 117 ? N VAL B 130 O ILE B 128 ? O ILE B 141 B 8 9 O THR B 134 ? O THR B 147 N ASP B 109 ? N ASP B 122 C 1 2 O GLY A 84 ? O GLY A 97 N VAL A 36 ? N VAL A 49 C 2 3 N LEU A 55 ? N LEU A 68 O CYS A 63 ? O CYS A 76 C 3 4 N LEU A 66 ? N LEU A 79 O ILE A 158 ? O ILE A 171 D 1 2 N ASP B 109 ? N ASP B 122 O THR B 134 ? O THR B 147 D 2 3 O VAL B 133 ? O VAL B 146 N VAL B 54 ? N VAL B 67 D 3 4 N PRO B 53 ? N PRO B 66 O VAL B 65 ? O VAL B 78 D 4 5 N ILE B 64 ? N ILE B 77 O LEU B 160 ? O LEU B 173 E 1 2 O GLY B 84 ? O GLY B 97 N VAL B 36 ? N VAL B 49 E 2 3 N PRO B 53 ? N PRO B 66 O VAL B 65 ? O VAL B 78 E 3 4 N ARG B 71 ? N ARG B 84 O GLY B 76 ? O GLY B 89 E 4 5 N TYR B 77 ? N TYR B 90 O THR B 179 ? O THR B 192 F 1 2 N GLU B 8 ? N GLU B 21 O LYS B 20 ? O LYS B 33 F 2 3 N THR B 21 ? N THR B 34 O TRP B 33 ? O TRP B 46 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A 8OG 1 ? 8 'BINDING SITE FOR RESIDUE 8OG A 1' AC2 Software A 8OG 2 ? 4 'BINDING SITE FOR RESIDUE 8OG A 2' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 TRP A 33 ? TRP A 46 . ? 1_555 ? 2 AC1 8 GLU A 34 ? GLU A 47 . ? 1_555 ? 3 AC1 8 HOH E . ? HOH A 303 . ? 1_555 ? 4 AC1 8 TRP B 15 ? TRP B 28 . ? 1_555 ? 5 AC1 8 ARG B 38 ? ARG B 51 . ? 1_555 ? 6 AC1 8 ARG B 71 ? ARG B 84 . ? 1_555 ? 7 AC1 8 ALA B 83 ? ALA B 96 . ? 1_555 ? 8 AC1 8 GLY B 84 ? GLY B 97 . ? 1_555 ? 9 AC2 4 TRP A 15 ? TRP A 28 . ? 1_555 ? 10 AC2 4 THR B 32 ? THR B 45 . ? 1_555 ? 11 AC2 4 TRP B 33 ? TRP B 46 . ? 1_555 ? 12 AC2 4 GLU B 34 ? GLU B 47 . ? 1_555 ? # _atom_sites.entry_id 3L85 _atom_sites.fract_transf_matrix[1][1] 0.008877 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005446 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.024995 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011914 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 14 14 LYS LYS A . n A 1 2 GLN 2 15 15 GLN GLN A . n A 1 3 TYR 3 16 16 TYR TYR A . n A 1 4 ILE 4 17 17 ILE ILE A . n A 1 5 ILE 5 18 18 ILE ILE A . n A 1 6 SER 6 19 19 SER SER A . n A 1 7 GLU 7 20 20 GLU GLU A . n A 1 8 GLU 8 21 21 GLU GLU A . n A 1 9 LEU 9 22 22 LEU LEU A . n A 1 10 ILE 10 23 23 ILE ILE A . n A 1 11 SER 11 24 24 SER SER A . n A 1 12 GLU 12 25 25 GLU GLU A . n A 1 13 GLY 13 26 26 GLY GLY A . n A 1 14 LYS 14 27 27 LYS LYS A . n A 1 15 TRP 15 28 28 TRP TRP A . n A 1 16 VAL 16 29 29 VAL VAL A . n A 1 17 LYS 17 30 30 LYS LYS A . n A 1 18 LEU 18 31 31 LEU LEU A . n A 1 19 GLU 19 32 32 GLU GLU A . n A 1 20 LYS 20 33 33 LYS LYS A . n A 1 21 THR 21 34 34 THR THR A . n A 1 22 THR 22 35 35 THR THR A . n A 1 23 TYR 23 36 36 TYR TYR A . n A 1 24 MET 24 37 37 MET MET A . n A 1 25 ASP 25 38 38 ASP ASP A . n A 1 26 PRO 26 39 39 PRO PRO A . n A 1 27 THR 27 40 40 THR THR A . n A 1 28 GLY 28 41 41 GLY GLY A . n A 1 29 LYS 29 42 42 LYS LYS A . n A 1 30 THR 30 43 43 THR THR A . n A 1 31 ARG 31 44 44 ARG ARG A . n A 1 32 THR 32 45 45 THR THR A . n A 1 33 TRP 33 46 46 TRP TRP A . n A 1 34 GLU 34 47 47 GLU GLU A . n A 1 35 SER 35 48 48 SER SER A . n A 1 36 VAL 36 49 49 VAL VAL A . n A 1 37 LYS 37 50 50 LYS LYS A . n A 1 38 ARG 38 51 51 ARG ARG A . n A 1 39 THR 39 52 52 THR THR A . n A 1 40 THR 40 53 53 THR THR A . n A 1 41 ARG 41 54 54 ARG ARG A . n A 1 42 LYS 42 55 55 LYS LYS A . n A 1 43 GLU 43 56 56 GLU GLU A . n A 1 44 GLN 44 57 57 GLN GLN A . n A 1 45 THR 45 58 58 THR THR A . n A 1 46 ALA 46 59 59 ALA ALA A . n A 1 47 ASP 47 60 60 ASP ASP A . n A 1 48 GLY 48 61 61 GLY GLY A . n A 1 49 VAL 49 62 62 VAL VAL A . n A 1 50 ALA 50 63 63 ALA ALA A . n A 1 51 VAL 51 64 64 VAL VAL A . n A 1 52 ILE 52 65 65 ILE ILE A . n A 1 53 PRO 53 66 66 PRO PRO A . n A 1 54 VAL 54 67 67 VAL VAL A . n A 1 55 LEU 55 68 68 LEU LEU A . n A 1 56 GLN 56 69 69 GLN GLN A . n A 1 57 ARG 57 70 70 ARG ARG A . n A 1 58 THR 58 71 71 THR THR A . n A 1 59 LEU 59 72 72 LEU LEU A . n A 1 60 HIS 60 73 73 HIS HIS A . n A 1 61 TYR 61 74 74 TYR TYR A . n A 1 62 GLU 62 75 75 GLU GLU A . n A 1 63 CYS 63 76 76 CYS CYS A . n A 1 64 ILE 64 77 77 ILE ILE A . n A 1 65 VAL 65 78 78 VAL VAL A . n A 1 66 LEU 66 79 79 LEU LEU A . n A 1 67 VAL 67 80 80 VAL VAL A . n A 1 68 LYS 68 81 81 LYS LYS A . n A 1 69 GLN 69 82 82 GLN GLN A . n A 1 70 PHE 70 83 83 PHE PHE A . n A 1 71 ARG 71 84 84 ARG ARG A . n A 1 72 PRO 72 85 85 PRO PRO A . n A 1 73 PRO 73 86 86 PRO PRO A . n A 1 74 MET 74 87 87 MET MET A . n A 1 75 GLY 75 88 88 GLY GLY A . n A 1 76 GLY 76 89 89 GLY GLY A . n A 1 77 TYR 77 90 90 TYR TYR A . n A 1 78 CYS 78 91 91 CYS CYS A . n A 1 79 ILE 79 92 92 ILE ILE A . n A 1 80 GLU 80 93 93 GLU GLU A . n A 1 81 PHE 81 94 94 PHE PHE A . n A 1 82 PRO 82 95 95 PRO PRO A . n A 1 83 ALA 83 96 96 ALA ALA A . n A 1 84 GLY 84 97 97 GLY GLY A . n A 1 85 LEU 85 98 98 LEU LEU A . n A 1 86 ILE 86 99 99 ILE ILE A . n A 1 87 ASP 87 100 100 ASP ASP A . n A 1 88 ASP 88 101 101 ASP ASP A . n A 1 89 GLY 89 102 102 GLY GLY A . n A 1 90 GLU 90 103 103 GLU GLU A . n A 1 91 THR 91 104 104 THR THR A . n A 1 92 PRO 92 105 105 PRO PRO A . n A 1 93 GLU 93 106 106 GLU GLU A . n A 1 94 ALA 94 107 107 ALA ALA A . n A 1 95 ALA 95 108 108 ALA ALA A . n A 1 96 ALA 96 109 109 ALA ALA A . n A 1 97 LEU 97 110 110 LEU LEU A . n A 1 98 ARG 98 111 111 ARG ARG A . n A 1 99 GLU 99 112 112 GLU GLU A . n A 1 100 LEU 100 113 113 LEU LEU A . n A 1 101 GLU 101 114 114 GLU GLU A . n A 1 102 GLU 102 115 115 GLU GLU A . n A 1 103 GLU 103 116 116 GLU GLU A . n A 1 104 THR 104 117 117 THR THR A . n A 1 105 GLY 105 118 118 GLY GLY A . n A 1 106 TYR 106 119 119 TYR TYR A . n A 1 107 LYS 107 120 120 LYS LYS A . n A 1 108 GLY 108 121 121 GLY GLY A . n A 1 109 ASP 109 122 122 ASP ASP A . n A 1 110 ILE 110 123 123 ILE ILE A . n A 1 111 ALA 111 124 124 ALA ALA A . n A 1 112 GLU 112 125 125 GLU GLU A . n A 1 113 CYS 113 126 126 CYS CYS A . n A 1 114 SER 114 127 127 SER SER A . n A 1 115 PRO 115 128 128 PRO PRO A . n A 1 116 ALA 116 129 129 ALA ALA A . n A 1 117 VAL 117 130 130 VAL VAL A . n A 1 118 CYS 118 131 131 CYS CYS A . n A 1 119 MET 119 132 132 MET MET A . n A 1 120 ASP 120 133 133 ASP ASP A . n A 1 121 PRO 121 134 134 PRO PRO A . n A 1 122 GLY 122 135 135 GLY GLY A . n A 1 123 LEU 123 136 136 LEU LEU A . n A 1 124 SER 124 137 137 SER SER A . n A 1 125 ASN 125 138 138 ASN ASN A . n A 1 126 CYS 126 139 139 CYS CYS A . n A 1 127 THR 127 140 140 THR THR A . n A 1 128 ILE 128 141 141 ILE ILE A . n A 1 129 HIS 129 142 142 HIS HIS A . n A 1 130 ILE 130 143 143 ILE ILE A . n A 1 131 VAL 131 144 144 VAL VAL A . n A 1 132 THR 132 145 145 THR THR A . n A 1 133 VAL 133 146 146 VAL VAL A . n A 1 134 THR 134 147 147 THR THR A . n A 1 135 ILE 135 148 148 ILE ILE A . n A 1 136 ASN 136 149 149 ASN ASN A . n A 1 137 GLY 137 150 150 GLY GLY A . n A 1 138 ASP 138 151 151 ASP ASP A . n A 1 139 ASP 139 152 152 ASP ASP A . n A 1 140 ALA 140 153 153 ALA ALA A . n A 1 141 GLU 141 154 154 GLU GLU A . n A 1 142 ASN 142 155 155 ASN ASN A . n A 1 143 ALA 143 156 156 ALA ALA A . n A 1 144 ARG 144 157 157 ARG ARG A . n A 1 145 PRO 145 158 158 PRO PRO A . n A 1 146 LYS 146 159 159 LYS LYS A . n A 1 147 PRO 147 160 160 PRO PRO A . n A 1 148 LYS 148 161 161 LYS LYS A . n A 1 149 PRO 149 162 162 PRO PRO A . n A 1 150 GLY 150 163 163 GLY GLY A . n A 1 151 ASP 151 164 164 ASP ASP A . n A 1 152 GLY 152 165 165 GLY GLY A . n A 1 153 GLU 153 166 166 GLU GLU A . n A 1 154 PHE 154 167 167 PHE PHE A . n A 1 155 VAL 155 168 168 VAL VAL A . n A 1 156 GLU 156 169 169 GLU GLU A . n A 1 157 VAL 157 170 170 VAL VAL A . n A 1 158 ILE 158 171 171 ILE ILE A . n A 1 159 SER 159 172 172 SER SER A . n A 1 160 LEU 160 173 173 LEU LEU A . n A 1 161 PRO 161 174 174 PRO PRO A . n A 1 162 LYS 162 175 175 LYS LYS A . n A 1 163 ASN 163 176 176 ASN ASN A . n A 1 164 ASP 164 177 177 ASP ASP A . n A 1 165 LEU 165 178 178 LEU LEU A . n A 1 166 LEU 166 179 179 LEU LEU A . n A 1 167 GLN 167 180 180 GLN GLN A . n A 1 168 ARG 168 181 181 ARG ARG A . n A 1 169 LEU 169 182 182 LEU LEU A . n A 1 170 ASP 170 183 183 ASP ASP A . n A 1 171 ALA 171 184 184 ALA ALA A . n A 1 172 LEU 172 185 185 LEU LEU A . n A 1 173 VAL 173 186 186 VAL VAL A . n A 1 174 ALA 174 187 187 ALA ALA A . n A 1 175 GLU 175 188 188 GLU GLU A . n A 1 176 GLU 176 189 189 GLU GLU A . n A 1 177 HIS 177 190 190 HIS HIS A . n A 1 178 LEU 178 191 191 LEU LEU A . n A 1 179 THR 179 192 192 THR THR A . n A 1 180 VAL 180 193 193 VAL VAL A . n A 1 181 ASP 181 194 194 ASP ASP A . n A 1 182 ALA 182 195 195 ALA ALA A . n A 1 183 ARG 183 196 196 ARG ARG A . n A 1 184 VAL 184 197 197 VAL VAL A . n A 1 185 TYR 185 198 198 TYR TYR A . n A 1 186 SER 186 199 199 SER SER A . n A 1 187 TYR 187 200 200 TYR TYR A . n A 1 188 ALA 188 201 201 ALA ALA A . n A 1 189 LEU 189 202 202 LEU LEU A . n A 1 190 ALA 190 203 203 ALA ALA A . n A 1 191 LEU 191 204 204 LEU LEU A . n A 1 192 LYS 192 205 205 LYS LYS A . n A 1 193 HIS 193 206 206 HIS HIS A . n A 1 194 ALA 194 207 207 ALA ALA A . n A 1 195 ASN 195 208 208 ASN ASN A . n B 1 1 LYS 1 14 14 LYS LYS B . n B 1 2 GLN 2 15 15 GLN GLN B . n B 1 3 TYR 3 16 16 TYR TYR B . n B 1 4 ILE 4 17 17 ILE ILE B . n B 1 5 ILE 5 18 18 ILE ILE B . n B 1 6 SER 6 19 19 SER SER B . n B 1 7 GLU 7 20 20 GLU GLU B . n B 1 8 GLU 8 21 21 GLU GLU B . n B 1 9 LEU 9 22 22 LEU LEU B . n B 1 10 ILE 10 23 23 ILE ILE B . n B 1 11 SER 11 24 24 SER SER B . n B 1 12 GLU 12 25 25 GLU GLU B . n B 1 13 GLY 13 26 26 GLY GLY B . n B 1 14 LYS 14 27 27 LYS LYS B . n B 1 15 TRP 15 28 28 TRP TRP B . n B 1 16 VAL 16 29 29 VAL VAL B . n B 1 17 LYS 17 30 30 LYS LYS B . n B 1 18 LEU 18 31 31 LEU LEU B . n B 1 19 GLU 19 32 32 GLU GLU B . n B 1 20 LYS 20 33 33 LYS LYS B . n B 1 21 THR 21 34 34 THR THR B . n B 1 22 THR 22 35 35 THR THR B . n B 1 23 TYR 23 36 36 TYR TYR B . n B 1 24 MET 24 37 37 MET MET B . n B 1 25 ASP 25 38 38 ASP ASP B . n B 1 26 PRO 26 39 39 PRO PRO B . n B 1 27 THR 27 40 40 THR THR B . n B 1 28 GLY 28 41 41 GLY GLY B . n B 1 29 LYS 29 42 42 LYS LYS B . n B 1 30 THR 30 43 43 THR THR B . n B 1 31 ARG 31 44 44 ARG ARG B . n B 1 32 THR 32 45 45 THR THR B . n B 1 33 TRP 33 46 46 TRP TRP B . n B 1 34 GLU 34 47 47 GLU GLU B . n B 1 35 SER 35 48 48 SER SER B . n B 1 36 VAL 36 49 49 VAL VAL B . n B 1 37 LYS 37 50 50 LYS LYS B . n B 1 38 ARG 38 51 51 ARG ARG B . n B 1 39 THR 39 52 52 THR THR B . n B 1 40 THR 40 53 53 THR THR B . n B 1 41 ARG 41 54 54 ARG ARG B . n B 1 42 LYS 42 55 55 LYS LYS B . n B 1 43 GLU 43 56 56 GLU GLU B . n B 1 44 GLN 44 57 57 GLN GLN B . n B 1 45 THR 45 58 58 THR THR B . n B 1 46 ALA 46 59 59 ALA ALA B . n B 1 47 ASP 47 60 60 ASP ASP B . n B 1 48 GLY 48 61 61 GLY GLY B . n B 1 49 VAL 49 62 62 VAL VAL B . n B 1 50 ALA 50 63 63 ALA ALA B . n B 1 51 VAL 51 64 64 VAL VAL B . n B 1 52 ILE 52 65 65 ILE ILE B . n B 1 53 PRO 53 66 66 PRO PRO B . n B 1 54 VAL 54 67 67 VAL VAL B . n B 1 55 LEU 55 68 68 LEU LEU B . n B 1 56 GLN 56 69 69 GLN GLN B . n B 1 57 ARG 57 70 70 ARG ARG B . n B 1 58 THR 58 71 71 THR THR B . n B 1 59 LEU 59 72 72 LEU LEU B . n B 1 60 HIS 60 73 73 HIS HIS B . n B 1 61 TYR 61 74 74 TYR TYR B . n B 1 62 GLU 62 75 75 GLU GLU B . n B 1 63 CYS 63 76 76 CYS CYS B . n B 1 64 ILE 64 77 77 ILE ILE B . n B 1 65 VAL 65 78 78 VAL VAL B . n B 1 66 LEU 66 79 79 LEU LEU B . n B 1 67 VAL 67 80 80 VAL VAL B . n B 1 68 LYS 68 81 81 LYS LYS B . n B 1 69 GLN 69 82 82 GLN GLN B . n B 1 70 PHE 70 83 83 PHE PHE B . n B 1 71 ARG 71 84 84 ARG ARG B . n B 1 72 PRO 72 85 85 PRO PRO B . n B 1 73 PRO 73 86 86 PRO PRO B . n B 1 74 MET 74 87 87 MET MET B . n B 1 75 GLY 75 88 88 GLY GLY B . n B 1 76 GLY 76 89 89 GLY GLY B . n B 1 77 TYR 77 90 90 TYR TYR B . n B 1 78 CYS 78 91 91 CYS CYS B . n B 1 79 ILE 79 92 92 ILE ILE B . n B 1 80 GLU 80 93 93 GLU GLU B . n B 1 81 PHE 81 94 94 PHE PHE B . n B 1 82 PRO 82 95 95 PRO PRO B . n B 1 83 ALA 83 96 96 ALA ALA B . n B 1 84 GLY 84 97 97 GLY GLY B . n B 1 85 LEU 85 98 98 LEU LEU B . n B 1 86 ILE 86 99 99 ILE ILE B . n B 1 87 ASP 87 100 100 ASP ASP B . n B 1 88 ASP 88 101 101 ASP ASP B . n B 1 89 GLY 89 102 102 GLY GLY B . n B 1 90 GLU 90 103 103 GLU GLU B . n B 1 91 THR 91 104 104 THR THR B . n B 1 92 PRO 92 105 105 PRO PRO B . n B 1 93 GLU 93 106 106 GLU GLU B . n B 1 94 ALA 94 107 107 ALA ALA B . n B 1 95 ALA 95 108 108 ALA ALA B . n B 1 96 ALA 96 109 109 ALA ALA B . n B 1 97 LEU 97 110 110 LEU LEU B . n B 1 98 ARG 98 111 111 ARG ARG B . n B 1 99 GLU 99 112 112 GLU GLU B . n B 1 100 LEU 100 113 113 LEU LEU B . n B 1 101 GLU 101 114 114 GLU GLU B . n B 1 102 GLU 102 115 115 GLU GLU B . n B 1 103 GLU 103 116 116 GLU GLU B . n B 1 104 THR 104 117 117 THR THR B . n B 1 105 GLY 105 118 118 GLY GLY B . n B 1 106 TYR 106 119 119 TYR TYR B . n B 1 107 LYS 107 120 120 LYS LYS B . n B 1 108 GLY 108 121 121 GLY GLY B . n B 1 109 ASP 109 122 122 ASP ASP B . n B 1 110 ILE 110 123 123 ILE ILE B . n B 1 111 ALA 111 124 124 ALA ALA B . n B 1 112 GLU 112 125 125 GLU GLU B . n B 1 113 CYS 113 126 126 CYS CYS B . n B 1 114 SER 114 127 127 SER SER B . n B 1 115 PRO 115 128 128 PRO PRO B . n B 1 116 ALA 116 129 129 ALA ALA B . n B 1 117 VAL 117 130 130 VAL VAL B . n B 1 118 CYS 118 131 131 CYS CYS B . n B 1 119 MET 119 132 132 MET MET B . n B 1 120 ASP 120 133 133 ASP ASP B . n B 1 121 PRO 121 134 134 PRO PRO B . n B 1 122 GLY 122 135 135 GLY GLY B . n B 1 123 LEU 123 136 136 LEU LEU B . n B 1 124 SER 124 137 137 SER SER B . n B 1 125 ASN 125 138 138 ASN ASN B . n B 1 126 CYS 126 139 139 CYS CYS B . n B 1 127 THR 127 140 140 THR THR B . n B 1 128 ILE 128 141 141 ILE ILE B . n B 1 129 HIS 129 142 142 HIS HIS B . n B 1 130 ILE 130 143 143 ILE ILE B . n B 1 131 VAL 131 144 144 VAL VAL B . n B 1 132 THR 132 145 145 THR THR B . n B 1 133 VAL 133 146 146 VAL VAL B . n B 1 134 THR 134 147 147 THR THR B . n B 1 135 ILE 135 148 148 ILE ILE B . n B 1 136 ASN 136 149 149 ASN ASN B . n B 1 137 GLY 137 150 150 GLY GLY B . n B 1 138 ASP 138 151 151 ASP ASP B . n B 1 139 ASP 139 152 152 ASP ASP B . n B 1 140 ALA 140 153 153 ALA ALA B . n B 1 141 GLU 141 154 154 GLU GLU B . n B 1 142 ASN 142 155 155 ASN ASN B . n B 1 143 ALA 143 156 156 ALA ALA B . n B 1 144 ARG 144 157 157 ARG ARG B . n B 1 145 PRO 145 158 158 PRO PRO B . n B 1 146 LYS 146 159 159 LYS LYS B . n B 1 147 PRO 147 160 160 PRO PRO B . n B 1 148 LYS 148 161 161 LYS LYS B . n B 1 149 PRO 149 162 162 PRO PRO B . n B 1 150 GLY 150 163 163 GLY GLY B . n B 1 151 ASP 151 164 164 ASP ASP B . n B 1 152 GLY 152 165 165 GLY GLY B . n B 1 153 GLU 153 166 166 GLU GLU B . n B 1 154 PHE 154 167 167 PHE PHE B . n B 1 155 VAL 155 168 168 VAL VAL B . n B 1 156 GLU 156 169 169 GLU GLU B . n B 1 157 VAL 157 170 170 VAL VAL B . n B 1 158 ILE 158 171 171 ILE ILE B . n B 1 159 SER 159 172 172 SER SER B . n B 1 160 LEU 160 173 173 LEU LEU B . n B 1 161 PRO 161 174 174 PRO PRO B . n B 1 162 LYS 162 175 175 LYS LYS B . n B 1 163 ASN 163 176 176 ASN ASN B . n B 1 164 ASP 164 177 177 ASP ASP B . n B 1 165 LEU 165 178 178 LEU LEU B . n B 1 166 LEU 166 179 179 LEU LEU B . n B 1 167 GLN 167 180 180 GLN GLN B . n B 1 168 ARG 168 181 181 ARG ARG B . n B 1 169 LEU 169 182 182 LEU LEU B . n B 1 170 ASP 170 183 183 ASP ASP B . n B 1 171 ALA 171 184 184 ALA ALA B . n B 1 172 LEU 172 185 185 LEU LEU B . n B 1 173 VAL 173 186 186 VAL VAL B . n B 1 174 ALA 174 187 187 ALA ALA B . n B 1 175 GLU 175 188 188 GLU GLU B . n B 1 176 GLU 176 189 189 GLU GLU B . n B 1 177 HIS 177 190 190 HIS HIS B . n B 1 178 LEU 178 191 191 LEU LEU B . n B 1 179 THR 179 192 192 THR THR B . n B 1 180 VAL 180 193 193 VAL VAL B . n B 1 181 ASP 181 194 194 ASP ASP B . n B 1 182 ALA 182 195 195 ALA ALA B . n B 1 183 ARG 183 196 196 ARG ARG B . n B 1 184 VAL 184 197 197 VAL VAL B . n B 1 185 TYR 185 198 198 TYR TYR B . n B 1 186 SER 186 199 199 SER SER B . n B 1 187 TYR 187 200 200 TYR TYR B . n B 1 188 ALA 188 201 201 ALA ALA B . n B 1 189 LEU 189 202 202 LEU LEU B . n B 1 190 ALA 190 203 203 ALA ALA B . n B 1 191 LEU 191 204 204 LEU LEU B . n B 1 192 LYS 192 205 205 LYS LYS B . n B 1 193 HIS 193 206 206 HIS HIS B . n B 1 194 ALA 194 207 207 ALA ALA B . n B 1 195 ASN 195 208 208 ASN ASN B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 8OG 1 1 1 8OG 8OG A . D 2 8OG 1 2 2 8OG 8OG A . E 3 HOH 1 300 300 HOH HOH A . E 3 HOH 2 301 301 HOH HOH A . E 3 HOH 3 302 302 HOH HOH A . E 3 HOH 4 303 303 HOH HOH A . E 3 HOH 5 304 304 HOH HOH A . E 3 HOH 6 305 305 HOH HOH A . E 3 HOH 7 306 306 HOH HOH A . E 3 HOH 8 307 307 HOH HOH A . E 3 HOH 9 308 308 HOH HOH A . E 3 HOH 10 309 309 HOH HOH A . E 3 HOH 11 310 310 HOH HOH A . E 3 HOH 12 311 311 HOH HOH A . E 3 HOH 13 312 312 HOH HOH A . E 3 HOH 14 313 313 HOH HOH A . E 3 HOH 15 314 314 HOH HOH A . E 3 HOH 16 315 315 HOH HOH A . E 3 HOH 17 316 316 HOH HOH A . E 3 HOH 18 317 317 HOH HOH A . E 3 HOH 19 318 318 HOH HOH A . E 3 HOH 20 319 319 HOH HOH A . E 3 HOH 21 320 320 HOH HOH A . E 3 HOH 22 321 321 HOH HOH A . E 3 HOH 23 322 322 HOH HOH A . E 3 HOH 24 323 323 HOH HOH A . E 3 HOH 25 324 324 HOH HOH A . E 3 HOH 26 325 325 HOH HOH A . E 3 HOH 27 326 326 HOH HOH A . E 3 HOH 28 327 327 HOH HOH A . E 3 HOH 29 328 328 HOH HOH A . E 3 HOH 30 329 329 HOH HOH A . E 3 HOH 31 330 330 HOH HOH A . E 3 HOH 32 331 331 HOH HOH A . E 3 HOH 33 332 332 HOH HOH A . E 3 HOH 34 333 333 HOH HOH A . E 3 HOH 35 334 334 HOH HOH A . E 3 HOH 36 335 335 HOH HOH A . E 3 HOH 37 336 336 HOH HOH A . E 3 HOH 38 337 337 HOH HOH A . E 3 HOH 39 338 338 HOH HOH A . E 3 HOH 40 339 339 HOH HOH A . E 3 HOH 41 340 340 HOH HOH A . E 3 HOH 42 341 341 HOH HOH A . F 3 HOH 1 342 342 HOH HOH B . F 3 HOH 2 343 343 HOH HOH B . F 3 HOH 3 344 344 HOH HOH B . F 3 HOH 4 345 345 HOH HOH B . F 3 HOH 5 346 346 HOH HOH B . F 3 HOH 6 347 347 HOH HOH B . F 3 HOH 7 348 348 HOH HOH B . F 3 HOH 8 349 349 HOH HOH B . F 3 HOH 9 350 350 HOH HOH B . F 3 HOH 10 351 351 HOH HOH B . F 3 HOH 11 352 352 HOH HOH B . F 3 HOH 12 353 353 HOH HOH B . F 3 HOH 13 354 354 HOH HOH B . F 3 HOH 14 355 355 HOH HOH B . F 3 HOH 15 356 356 HOH HOH B . F 3 HOH 16 357 357 HOH HOH B . F 3 HOH 17 358 358 HOH HOH B . F 3 HOH 18 359 359 HOH HOH B . F 3 HOH 19 360 360 HOH HOH B . F 3 HOH 20 361 361 HOH HOH B . F 3 HOH 21 362 362 HOH HOH B . F 3 HOH 22 363 363 HOH HOH B . F 3 HOH 23 364 364 HOH HOH B . F 3 HOH 24 365 365 HOH HOH B . F 3 HOH 25 366 366 HOH HOH B . F 3 HOH 26 367 367 HOH HOH B . F 3 HOH 27 368 368 HOH HOH B . F 3 HOH 28 369 369 HOH HOH B . F 3 HOH 29 370 370 HOH HOH B . F 3 HOH 30 371 371 HOH HOH B . F 3 HOH 31 372 372 HOH HOH B . F 3 HOH 32 373 373 HOH HOH B . F 3 HOH 33 374 374 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6040 ? 1 MORE -50 ? 1 'SSA (A^2)' 16950 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-01-12 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2011-11-09 4 'Structure model' 1 3 2013-06-05 5 'Structure model' 1 4 2023-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Structure summary' 4 4 'Structure model' 'Database references' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Derived calculations' 8 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' chem_comp_atom 2 5 'Structure model' chem_comp_bond 3 5 'Structure model' database_2 4 5 'Structure model' pdbx_initial_refinement_model 5 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 PHENIX . ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 PDB_EXTRACT 3.005 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 HKL-2000 . ? ? ? ? 'data collection' ? ? ? 4 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 5 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? 6 CNS . ? ? ? ? phasing ? ? ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 20 ? ? -119.54 77.02 2 1 THR A 53 ? ? -89.22 33.31 3 1 ASP A 133 ? ? -166.31 73.80 4 1 PRO A 158 ? ? -56.19 107.80 5 1 ASP A 177 ? ? -161.08 30.60 6 1 HIS A 190 ? ? 53.55 15.35 7 1 TRP B 46 ? ? -171.18 121.99 8 1 THR B 53 ? ? -75.00 20.85 9 1 GLN B 57 ? ? -116.03 -168.09 10 1 ASP B 133 ? ? -156.90 78.26 11 1 LEU B 136 ? ? -124.48 -62.07 12 1 ALA B 156 ? ? -52.55 -72.87 13 1 LYS B 161 ? ? -112.44 77.48 14 1 ASP B 164 ? ? -65.01 98.89 15 1 ASP B 177 ? ? -142.47 26.06 16 1 LEU B 191 ? ? -176.20 134.13 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 N 1 A 8OG 2 ? OP3 ? D 8OG 1 OP3 2 1 N 1 A 8OG 2 ? P ? D 8OG 1 P 3 1 N 1 A 8OG 2 ? OP1 ? D 8OG 1 OP1 4 1 N 1 A 8OG 2 ? OP2 ? D 8OG 1 OP2 5 1 N 1 A 8OG 2 ? "O5'" ? D 8OG 1 "O5'" 6 1 N 1 A 8OG 2 ? "C5'" ? D 8OG 1 "C5'" 7 1 N 1 A 8OG 2 ? "C4'" ? D 8OG 1 "C4'" 8 1 N 1 A 8OG 2 ? "O4'" ? D 8OG 1 "O4'" 9 1 N 1 A 8OG 2 ? "C3'" ? D 8OG 1 "C3'" 10 1 N 1 A 8OG 2 ? "O3'" ? D 8OG 1 "O3'" 11 1 N 1 A 8OG 2 ? "C2'" ? D 8OG 1 "C2'" # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 8OG OP3 O N N 1 8OG P P N N 2 8OG OP1 O N N 3 8OG OP2 O N N 4 8OG "O5'" O N N 5 8OG "C5'" C N N 6 8OG "C4'" C N R 7 8OG "O4'" O N N 8 8OG "C3'" C N S 9 8OG "O3'" O N N 10 8OG "C2'" C N N 11 8OG "C1'" C N R 12 8OG N9 N N N 13 8OG C8 C N N 14 8OG N7 N N N 15 8OG C5 C N N 16 8OG C6 C N N 17 8OG O6 O N N 18 8OG N1 N N N 19 8OG C2 C N N 20 8OG N2 N N N 21 8OG N3 N N N 22 8OG C4 C N N 23 8OG O8 O N N 24 8OG HOP3 H N N 25 8OG HOP2 H N N 26 8OG "H5'" H N N 27 8OG "H5''" H N N 28 8OG "H4'" H N N 29 8OG "H3'" H N N 30 8OG "HO3'" H N N 31 8OG "H2'" H N N 32 8OG "H2''" H N N 33 8OG "H1'" H N N 34 8OG H7 H N N 35 8OG H1 H N N 36 8OG H21 H N N 37 8OG H22 H N N 38 ALA N N N N 39 ALA CA C N S 40 ALA C C N N 41 ALA O O N N 42 ALA CB C N N 43 ALA OXT O N N 44 ALA H H N N 45 ALA H2 H N N 46 ALA HA H N N 47 ALA HB1 H N N 48 ALA HB2 H N N 49 ALA HB3 H N N 50 ALA HXT H N N 51 ARG N N N N 52 ARG CA C N S 53 ARG C C N N 54 ARG O O N N 55 ARG CB C N N 56 ARG CG C N N 57 ARG CD C N N 58 ARG NE N N N 59 ARG CZ C N N 60 ARG NH1 N N N 61 ARG NH2 N N N 62 ARG OXT O N N 63 ARG H H N N 64 ARG H2 H N N 65 ARG HA H N N 66 ARG HB2 H N N 67 ARG HB3 H N N 68 ARG HG2 H N N 69 ARG HG3 H N N 70 ARG HD2 H N N 71 ARG HD3 H N N 72 ARG HE H N N 73 ARG HH11 H N N 74 ARG HH12 H N N 75 ARG HH21 H N N 76 ARG HH22 H N N 77 ARG HXT H N N 78 ASN N N N N 79 ASN CA C N S 80 ASN C C N N 81 ASN O O N N 82 ASN CB C N N 83 ASN CG C N N 84 ASN OD1 O N N 85 ASN ND2 N N N 86 ASN OXT O N N 87 ASN H H N N 88 ASN H2 H N N 89 ASN HA H N N 90 ASN HB2 H N N 91 ASN HB3 H N N 92 ASN HD21 H N N 93 ASN HD22 H N N 94 ASN HXT H N N 95 ASP N N N N 96 ASP CA C N S 97 ASP C C N N 98 ASP O O N N 99 ASP CB C N N 100 ASP CG C N N 101 ASP OD1 O N N 102 ASP OD2 O N N 103 ASP OXT O N N 104 ASP H H N N 105 ASP H2 H N N 106 ASP HA H N N 107 ASP HB2 H N N 108 ASP HB3 H N N 109 ASP HD2 H N N 110 ASP HXT H N N 111 CYS N N N N 112 CYS CA C N R 113 CYS C C N N 114 CYS O O N N 115 CYS CB C N N 116 CYS SG S N N 117 CYS OXT O N N 118 CYS H H N N 119 CYS H2 H N N 120 CYS HA H N N 121 CYS HB2 H N N 122 CYS HB3 H N N 123 CYS HG H N N 124 CYS HXT H N N 125 GLN N N N N 126 GLN CA C N S 127 GLN C C N N 128 GLN O O N N 129 GLN CB C N N 130 GLN CG C N N 131 GLN CD C N N 132 GLN OE1 O N N 133 GLN NE2 N N N 134 GLN OXT O N N 135 GLN H H N N 136 GLN H2 H N N 137 GLN HA H N N 138 GLN HB2 H N N 139 GLN HB3 H N N 140 GLN HG2 H N N 141 GLN HG3 H N N 142 GLN HE21 H N N 143 GLN HE22 H N N 144 GLN HXT H N N 145 GLU N N N N 146 GLU CA C N S 147 GLU C C N N 148 GLU O O N N 149 GLU CB C N N 150 GLU CG C N N 151 GLU CD C N N 152 GLU OE1 O N N 153 GLU OE2 O N N 154 GLU OXT O N N 155 GLU H H N N 156 GLU H2 H N N 157 GLU HA H N N 158 GLU HB2 H N N 159 GLU HB3 H N N 160 GLU HG2 H N N 161 GLU HG3 H N N 162 GLU HE2 H N N 163 GLU HXT H N N 164 GLY N N N N 165 GLY CA C N N 166 GLY C C N N 167 GLY O O N N 168 GLY OXT O N N 169 GLY H H N N 170 GLY H2 H N N 171 GLY HA2 H N N 172 GLY HA3 H N N 173 GLY HXT H N N 174 HIS N N N N 175 HIS CA C N S 176 HIS C C N N 177 HIS O O N N 178 HIS CB C N N 179 HIS CG C Y N 180 HIS ND1 N Y N 181 HIS CD2 C Y N 182 HIS CE1 C Y N 183 HIS NE2 N Y N 184 HIS OXT O N N 185 HIS H H N N 186 HIS H2 H N N 187 HIS HA H N N 188 HIS HB2 H N N 189 HIS HB3 H N N 190 HIS HD1 H N N 191 HIS HD2 H N N 192 HIS HE1 H N N 193 HIS HE2 H N N 194 HIS HXT H N N 195 HOH O O N N 196 HOH H1 H N N 197 HOH H2 H N N 198 ILE N N N N 199 ILE CA C N S 200 ILE C C N N 201 ILE O O N N 202 ILE CB C N S 203 ILE CG1 C N N 204 ILE CG2 C N N 205 ILE CD1 C N N 206 ILE OXT O N N 207 ILE H H N N 208 ILE H2 H N N 209 ILE HA H N N 210 ILE HB H N N 211 ILE HG12 H N N 212 ILE HG13 H N N 213 ILE HG21 H N N 214 ILE HG22 H N N 215 ILE HG23 H N N 216 ILE HD11 H N N 217 ILE HD12 H N N 218 ILE HD13 H N N 219 ILE HXT H N N 220 LEU N N N N 221 LEU CA C N S 222 LEU C C N N 223 LEU O O N N 224 LEU CB C N N 225 LEU CG C N N 226 LEU CD1 C N N 227 LEU CD2 C N N 228 LEU OXT O N N 229 LEU H H N N 230 LEU H2 H N N 231 LEU HA H N N 232 LEU HB2 H N N 233 LEU HB3 H N N 234 LEU HG H N N 235 LEU HD11 H N N 236 LEU HD12 H N N 237 LEU HD13 H N N 238 LEU HD21 H N N 239 LEU HD22 H N N 240 LEU HD23 H N N 241 LEU HXT H N N 242 LYS N N N N 243 LYS CA C N S 244 LYS C C N N 245 LYS O O N N 246 LYS CB C N N 247 LYS CG C N N 248 LYS CD C N N 249 LYS CE C N N 250 LYS NZ N N N 251 LYS OXT O N N 252 LYS H H N N 253 LYS H2 H N N 254 LYS HA H N N 255 LYS HB2 H N N 256 LYS HB3 H N N 257 LYS HG2 H N N 258 LYS HG3 H N N 259 LYS HD2 H N N 260 LYS HD3 H N N 261 LYS HE2 H N N 262 LYS HE3 H N N 263 LYS HZ1 H N N 264 LYS HZ2 H N N 265 LYS HZ3 H N N 266 LYS HXT H N N 267 MET N N N N 268 MET CA C N S 269 MET C C N N 270 MET O O N N 271 MET CB C N N 272 MET CG C N N 273 MET SD S N N 274 MET CE C N N 275 MET OXT O N N 276 MET H H N N 277 MET H2 H N N 278 MET HA H N N 279 MET HB2 H N N 280 MET HB3 H N N 281 MET HG2 H N N 282 MET HG3 H N N 283 MET HE1 H N N 284 MET HE2 H N N 285 MET HE3 H N N 286 MET HXT H N N 287 PHE N N N N 288 PHE CA C N S 289 PHE C C N N 290 PHE O O N N 291 PHE CB C N N 292 PHE CG C Y N 293 PHE CD1 C Y N 294 PHE CD2 C Y N 295 PHE CE1 C Y N 296 PHE CE2 C Y N 297 PHE CZ C Y N 298 PHE OXT O N N 299 PHE H H N N 300 PHE H2 H N N 301 PHE HA H N N 302 PHE HB2 H N N 303 PHE HB3 H N N 304 PHE HD1 H N N 305 PHE HD2 H N N 306 PHE HE1 H N N 307 PHE HE2 H N N 308 PHE HZ H N N 309 PHE HXT H N N 310 PRO N N N N 311 PRO CA C N S 312 PRO C C N N 313 PRO O O N N 314 PRO CB C N N 315 PRO CG C N N 316 PRO CD C N N 317 PRO OXT O N N 318 PRO H H N N 319 PRO HA H N N 320 PRO HB2 H N N 321 PRO HB3 H N N 322 PRO HG2 H N N 323 PRO HG3 H N N 324 PRO HD2 H N N 325 PRO HD3 H N N 326 PRO HXT H N N 327 SER N N N N 328 SER CA C N S 329 SER C C N N 330 SER O O N N 331 SER CB C N N 332 SER OG O N N 333 SER OXT O N N 334 SER H H N N 335 SER H2 H N N 336 SER HA H N N 337 SER HB2 H N N 338 SER HB3 H N N 339 SER HG H N N 340 SER HXT H N N 341 THR N N N N 342 THR CA C N S 343 THR C C N N 344 THR O O N N 345 THR CB C N R 346 THR OG1 O N N 347 THR CG2 C N N 348 THR OXT O N N 349 THR H H N N 350 THR H2 H N N 351 THR HA H N N 352 THR HB H N N 353 THR HG1 H N N 354 THR HG21 H N N 355 THR HG22 H N N 356 THR HG23 H N N 357 THR HXT H N N 358 TRP N N N N 359 TRP CA C N S 360 TRP C C N N 361 TRP O O N N 362 TRP CB C N N 363 TRP CG C Y N 364 TRP CD1 C Y N 365 TRP CD2 C Y N 366 TRP NE1 N Y N 367 TRP CE2 C Y N 368 TRP CE3 C Y N 369 TRP CZ2 C Y N 370 TRP CZ3 C Y N 371 TRP CH2 C Y N 372 TRP OXT O N N 373 TRP H H N N 374 TRP H2 H N N 375 TRP HA H N N 376 TRP HB2 H N N 377 TRP HB3 H N N 378 TRP HD1 H N N 379 TRP HE1 H N N 380 TRP HE3 H N N 381 TRP HZ2 H N N 382 TRP HZ3 H N N 383 TRP HH2 H N N 384 TRP HXT H N N 385 TYR N N N N 386 TYR CA C N S 387 TYR C C N N 388 TYR O O N N 389 TYR CB C N N 390 TYR CG C Y N 391 TYR CD1 C Y N 392 TYR CD2 C Y N 393 TYR CE1 C Y N 394 TYR CE2 C Y N 395 TYR CZ C Y N 396 TYR OH O N N 397 TYR OXT O N N 398 TYR H H N N 399 TYR H2 H N N 400 TYR HA H N N 401 TYR HB2 H N N 402 TYR HB3 H N N 403 TYR HD1 H N N 404 TYR HD2 H N N 405 TYR HE1 H N N 406 TYR HE2 H N N 407 TYR HH H N N 408 TYR HXT H N N 409 VAL N N N N 410 VAL CA C N S 411 VAL C C N N 412 VAL O O N N 413 VAL CB C N N 414 VAL CG1 C N N 415 VAL CG2 C N N 416 VAL OXT O N N 417 VAL H H N N 418 VAL H2 H N N 419 VAL HA H N N 420 VAL HB H N N 421 VAL HG11 H N N 422 VAL HG12 H N N 423 VAL HG13 H N N 424 VAL HG21 H N N 425 VAL HG22 H N N 426 VAL HG23 H N N 427 VAL HXT H N N 428 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8OG OP3 P sing N N 1 8OG OP3 HOP3 sing N N 2 8OG P OP1 doub N N 3 8OG P OP2 sing N N 4 8OG P "O5'" sing N N 5 8OG OP2 HOP2 sing N N 6 8OG "O5'" "C5'" sing N N 7 8OG "C5'" "C4'" sing N N 8 8OG "C5'" "H5'" sing N N 9 8OG "C5'" "H5''" sing N N 10 8OG "C4'" "O4'" sing N N 11 8OG "C4'" "C3'" sing N N 12 8OG "C4'" "H4'" sing N N 13 8OG "O4'" "C1'" sing N N 14 8OG "C3'" "O3'" sing N N 15 8OG "C3'" "C2'" sing N N 16 8OG "C3'" "H3'" sing N N 17 8OG "O3'" "HO3'" sing N N 18 8OG "C2'" "C1'" sing N N 19 8OG "C2'" "H2'" sing N N 20 8OG "C2'" "H2''" sing N N 21 8OG "C1'" N9 sing N N 22 8OG "C1'" "H1'" sing N N 23 8OG N9 C8 sing N N 24 8OG N9 C4 sing N N 25 8OG C8 N7 sing N N 26 8OG C8 O8 doub N N 27 8OG N7 C5 sing N N 28 8OG N7 H7 sing N N 29 8OG C5 C6 sing N N 30 8OG C5 C4 doub N N 31 8OG C6 O6 doub N N 32 8OG C6 N1 sing N N 33 8OG N1 C2 sing N N 34 8OG N1 H1 sing N N 35 8OG C2 N2 sing N N 36 8OG C2 N3 doub N N 37 8OG N2 H21 sing N N 38 8OG N2 H22 sing N N 39 8OG N3 C4 sing N N 40 ALA N CA sing N N 41 ALA N H sing N N 42 ALA N H2 sing N N 43 ALA CA C sing N N 44 ALA CA CB sing N N 45 ALA CA HA sing N N 46 ALA C O doub N N 47 ALA C OXT sing N N 48 ALA CB HB1 sing N N 49 ALA CB HB2 sing N N 50 ALA CB HB3 sing N N 51 ALA OXT HXT sing N N 52 ARG N CA sing N N 53 ARG N H sing N N 54 ARG N H2 sing N N 55 ARG CA C sing N N 56 ARG CA CB sing N N 57 ARG CA HA sing N N 58 ARG C O doub N N 59 ARG C OXT sing N N 60 ARG CB CG sing N N 61 ARG CB HB2 sing N N 62 ARG CB HB3 sing N N 63 ARG CG CD sing N N 64 ARG CG HG2 sing N N 65 ARG CG HG3 sing N N 66 ARG CD NE sing N N 67 ARG CD HD2 sing N N 68 ARG CD HD3 sing N N 69 ARG NE CZ sing N N 70 ARG NE HE sing N N 71 ARG CZ NH1 sing N N 72 ARG CZ NH2 doub N N 73 ARG NH1 HH11 sing N N 74 ARG NH1 HH12 sing N N 75 ARG NH2 HH21 sing N N 76 ARG NH2 HH22 sing N N 77 ARG OXT HXT sing N N 78 ASN N CA sing N N 79 ASN N H sing N N 80 ASN N H2 sing N N 81 ASN CA C sing N N 82 ASN CA CB sing N N 83 ASN CA HA sing N N 84 ASN C O doub N N 85 ASN C OXT sing N N 86 ASN CB CG sing N N 87 ASN CB HB2 sing N N 88 ASN CB HB3 sing N N 89 ASN CG OD1 doub N N 90 ASN CG ND2 sing N N 91 ASN ND2 HD21 sing N N 92 ASN ND2 HD22 sing N N 93 ASN OXT HXT sing N N 94 ASP N CA sing N N 95 ASP N H sing N N 96 ASP N H2 sing N N 97 ASP CA C sing N N 98 ASP CA CB sing N N 99 ASP CA HA sing N N 100 ASP C O doub N N 101 ASP C OXT sing N N 102 ASP CB CG sing N N 103 ASP CB HB2 sing N N 104 ASP CB HB3 sing N N 105 ASP CG OD1 doub N N 106 ASP CG OD2 sing N N 107 ASP OD2 HD2 sing N N 108 ASP OXT HXT sing N N 109 CYS N CA sing N N 110 CYS N H sing N N 111 CYS N H2 sing N N 112 CYS CA C sing N N 113 CYS CA CB sing N N 114 CYS CA HA sing N N 115 CYS C O doub N N 116 CYS C OXT sing N N 117 CYS CB SG sing N N 118 CYS CB HB2 sing N N 119 CYS CB HB3 sing N N 120 CYS SG HG sing N N 121 CYS OXT HXT sing N N 122 GLN N CA sing N N 123 GLN N H sing N N 124 GLN N H2 sing N N 125 GLN CA C sing N N 126 GLN CA CB sing N N 127 GLN CA HA sing N N 128 GLN C O doub N N 129 GLN C OXT sing N N 130 GLN CB CG sing N N 131 GLN CB HB2 sing N N 132 GLN CB HB3 sing N N 133 GLN CG CD sing N N 134 GLN CG HG2 sing N N 135 GLN CG HG3 sing N N 136 GLN CD OE1 doub N N 137 GLN CD NE2 sing N N 138 GLN NE2 HE21 sing N N 139 GLN NE2 HE22 sing N N 140 GLN OXT HXT sing N N 141 GLU N CA sing N N 142 GLU N H sing N N 143 GLU N H2 sing N N 144 GLU CA C sing N N 145 GLU CA CB sing N N 146 GLU CA HA sing N N 147 GLU C O doub N N 148 GLU C OXT sing N N 149 GLU CB CG sing N N 150 GLU CB HB2 sing N N 151 GLU CB HB3 sing N N 152 GLU CG CD sing N N 153 GLU CG HG2 sing N N 154 GLU CG HG3 sing N N 155 GLU CD OE1 doub N N 156 GLU CD OE2 sing N N 157 GLU OE2 HE2 sing N N 158 GLU OXT HXT sing N N 159 GLY N CA sing N N 160 GLY N H sing N N 161 GLY N H2 sing N N 162 GLY CA C sing N N 163 GLY CA HA2 sing N N 164 GLY CA HA3 sing N N 165 GLY C O doub N N 166 GLY C OXT sing N N 167 GLY OXT HXT sing N N 168 HIS N CA sing N N 169 HIS N H sing N N 170 HIS N H2 sing N N 171 HIS CA C sing N N 172 HIS CA CB sing N N 173 HIS CA HA sing N N 174 HIS C O doub N N 175 HIS C OXT sing N N 176 HIS CB CG sing N N 177 HIS CB HB2 sing N N 178 HIS CB HB3 sing N N 179 HIS CG ND1 sing Y N 180 HIS CG CD2 doub Y N 181 HIS ND1 CE1 doub Y N 182 HIS ND1 HD1 sing N N 183 HIS CD2 NE2 sing Y N 184 HIS CD2 HD2 sing N N 185 HIS CE1 NE2 sing Y N 186 HIS CE1 HE1 sing N N 187 HIS NE2 HE2 sing N N 188 HIS OXT HXT sing N N 189 HOH O H1 sing N N 190 HOH O H2 sing N N 191 ILE N CA sing N N 192 ILE N H sing N N 193 ILE N H2 sing N N 194 ILE CA C sing N N 195 ILE CA CB sing N N 196 ILE CA HA sing N N 197 ILE C O doub N N 198 ILE C OXT sing N N 199 ILE CB CG1 sing N N 200 ILE CB CG2 sing N N 201 ILE CB HB sing N N 202 ILE CG1 CD1 sing N N 203 ILE CG1 HG12 sing N N 204 ILE CG1 HG13 sing N N 205 ILE CG2 HG21 sing N N 206 ILE CG2 HG22 sing N N 207 ILE CG2 HG23 sing N N 208 ILE CD1 HD11 sing N N 209 ILE CD1 HD12 sing N N 210 ILE CD1 HD13 sing N N 211 ILE OXT HXT sing N N 212 LEU N CA sing N N 213 LEU N H sing N N 214 LEU N H2 sing N N 215 LEU CA C sing N N 216 LEU CA CB sing N N 217 LEU CA HA sing N N 218 LEU C O doub N N 219 LEU C OXT sing N N 220 LEU CB CG sing N N 221 LEU CB HB2 sing N N 222 LEU CB HB3 sing N N 223 LEU CG CD1 sing N N 224 LEU CG CD2 sing N N 225 LEU CG HG sing N N 226 LEU CD1 HD11 sing N N 227 LEU CD1 HD12 sing N N 228 LEU CD1 HD13 sing N N 229 LEU CD2 HD21 sing N N 230 LEU CD2 HD22 sing N N 231 LEU CD2 HD23 sing N N 232 LEU OXT HXT sing N N 233 LYS N CA sing N N 234 LYS N H sing N N 235 LYS N H2 sing N N 236 LYS CA C sing N N 237 LYS CA CB sing N N 238 LYS CA HA sing N N 239 LYS C O doub N N 240 LYS C OXT sing N N 241 LYS CB CG sing N N 242 LYS CB HB2 sing N N 243 LYS CB HB3 sing N N 244 LYS CG CD sing N N 245 LYS CG HG2 sing N N 246 LYS CG HG3 sing N N 247 LYS CD CE sing N N 248 LYS CD HD2 sing N N 249 LYS CD HD3 sing N N 250 LYS CE NZ sing N N 251 LYS CE HE2 sing N N 252 LYS CE HE3 sing N N 253 LYS NZ HZ1 sing N N 254 LYS NZ HZ2 sing N N 255 LYS NZ HZ3 sing N N 256 LYS OXT HXT sing N N 257 MET N CA sing N N 258 MET N H sing N N 259 MET N H2 sing N N 260 MET CA C sing N N 261 MET CA CB sing N N 262 MET CA HA sing N N 263 MET C O doub N N 264 MET C OXT sing N N 265 MET CB CG sing N N 266 MET CB HB2 sing N N 267 MET CB HB3 sing N N 268 MET CG SD sing N N 269 MET CG HG2 sing N N 270 MET CG HG3 sing N N 271 MET SD CE sing N N 272 MET CE HE1 sing N N 273 MET CE HE2 sing N N 274 MET CE HE3 sing N N 275 MET OXT HXT sing N N 276 PHE N CA sing N N 277 PHE N H sing N N 278 PHE N H2 sing N N 279 PHE CA C sing N N 280 PHE CA CB sing N N 281 PHE CA HA sing N N 282 PHE C O doub N N 283 PHE C OXT sing N N 284 PHE CB CG sing N N 285 PHE CB HB2 sing N N 286 PHE CB HB3 sing N N 287 PHE CG CD1 doub Y N 288 PHE CG CD2 sing Y N 289 PHE CD1 CE1 sing Y N 290 PHE CD1 HD1 sing N N 291 PHE CD2 CE2 doub Y N 292 PHE CD2 HD2 sing N N 293 PHE CE1 CZ doub Y N 294 PHE CE1 HE1 sing N N 295 PHE CE2 CZ sing Y N 296 PHE CE2 HE2 sing N N 297 PHE CZ HZ sing N N 298 PHE OXT HXT sing N N 299 PRO N CA sing N N 300 PRO N CD sing N N 301 PRO N H sing N N 302 PRO CA C sing N N 303 PRO CA CB sing N N 304 PRO CA HA sing N N 305 PRO C O doub N N 306 PRO C OXT sing N N 307 PRO CB CG sing N N 308 PRO CB HB2 sing N N 309 PRO CB HB3 sing N N 310 PRO CG CD sing N N 311 PRO CG HG2 sing N N 312 PRO CG HG3 sing N N 313 PRO CD HD2 sing N N 314 PRO CD HD3 sing N N 315 PRO OXT HXT sing N N 316 SER N CA sing N N 317 SER N H sing N N 318 SER N H2 sing N N 319 SER CA C sing N N 320 SER CA CB sing N N 321 SER CA HA sing N N 322 SER C O doub N N 323 SER C OXT sing N N 324 SER CB OG sing N N 325 SER CB HB2 sing N N 326 SER CB HB3 sing N N 327 SER OG HG sing N N 328 SER OXT HXT sing N N 329 THR N CA sing N N 330 THR N H sing N N 331 THR N H2 sing N N 332 THR CA C sing N N 333 THR CA CB sing N N 334 THR CA HA sing N N 335 THR C O doub N N 336 THR C OXT sing N N 337 THR CB OG1 sing N N 338 THR CB CG2 sing N N 339 THR CB HB sing N N 340 THR OG1 HG1 sing N N 341 THR CG2 HG21 sing N N 342 THR CG2 HG22 sing N N 343 THR CG2 HG23 sing N N 344 THR OXT HXT sing N N 345 TRP N CA sing N N 346 TRP N H sing N N 347 TRP N H2 sing N N 348 TRP CA C sing N N 349 TRP CA CB sing N N 350 TRP CA HA sing N N 351 TRP C O doub N N 352 TRP C OXT sing N N 353 TRP CB CG sing N N 354 TRP CB HB2 sing N N 355 TRP CB HB3 sing N N 356 TRP CG CD1 doub Y N 357 TRP CG CD2 sing Y N 358 TRP CD1 NE1 sing Y N 359 TRP CD1 HD1 sing N N 360 TRP CD2 CE2 doub Y N 361 TRP CD2 CE3 sing Y N 362 TRP NE1 CE2 sing Y N 363 TRP NE1 HE1 sing N N 364 TRP CE2 CZ2 sing Y N 365 TRP CE3 CZ3 doub Y N 366 TRP CE3 HE3 sing N N 367 TRP CZ2 CH2 doub Y N 368 TRP CZ2 HZ2 sing N N 369 TRP CZ3 CH2 sing Y N 370 TRP CZ3 HZ3 sing N N 371 TRP CH2 HH2 sing N N 372 TRP OXT HXT sing N N 373 TYR N CA sing N N 374 TYR N H sing N N 375 TYR N H2 sing N N 376 TYR CA C sing N N 377 TYR CA CB sing N N 378 TYR CA HA sing N N 379 TYR C O doub N N 380 TYR C OXT sing N N 381 TYR CB CG sing N N 382 TYR CB HB2 sing N N 383 TYR CB HB3 sing N N 384 TYR CG CD1 doub Y N 385 TYR CG CD2 sing Y N 386 TYR CD1 CE1 sing Y N 387 TYR CD1 HD1 sing N N 388 TYR CD2 CE2 doub Y N 389 TYR CD2 HD2 sing N N 390 TYR CE1 CZ doub Y N 391 TYR CE1 HE1 sing N N 392 TYR CE2 CZ sing Y N 393 TYR CE2 HE2 sing N N 394 TYR CZ OH sing N N 395 TYR OH HH sing N N 396 TYR OXT HXT sing N N 397 VAL N CA sing N N 398 VAL N H sing N N 399 VAL N H2 sing N N 400 VAL CA C sing N N 401 VAL CA CB sing N N 402 VAL CA HA sing N N 403 VAL C O doub N N 404 VAL C OXT sing N N 405 VAL CB CG1 sing N N 406 VAL CB CG2 sing N N 407 VAL CB HB sing N N 408 VAL CG1 HG11 sing N N 409 VAL CG1 HG12 sing N N 410 VAL CG1 HG13 sing N N 411 VAL CG2 HG21 sing N N 412 VAL CG2 HG22 sing N N 413 VAL CG2 HG23 sing N N 414 VAL OXT HXT sing N N 415 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" 8OG 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2DSC _pdbx_initial_refinement_model.details 'PDB ENTRY 2DSC' #