HEADER TRANSPORT PROTEIN 06-JAN-10 3LA9 TITLE CRYSTAL STRUCTURE OF THE TRIMERIC AUTOTRANSPORTER ADHESIN HEAD DOMAIN TITLE 2 BPAA FROM BURKHOLDERIA PSEUDOMALLEI, IODIDE PHASED COMPND MOL_ID: 1; COMPND 2 MOLECULE: HAEMAGGLUTININ FAMILY PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA PSEUDOMALLEI; SOURCE 3 ORGANISM_TAXID: 320372; SOURCE 4 STRAIN: 1710B; SOURCE 5 GENE: BURPS1710B_A0459, XADA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: AVA0421 KEYWDS NIAID, SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE, KEYWDS 2 AUTOTRANSPORTER, IODIDE PHASED, COLLAGEN BINDING, MELIOIDOSIS, KEYWDS 3 SSGCID, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 6 21-FEB-24 3LA9 1 REMARK SEQADV REVDAT 5 27-SEP-17 3LA9 1 REMARK REVDAT 4 12-JAN-11 3LA9 1 JRNL REVDAT 3 13-OCT-10 3LA9 1 JRNL REVDAT 2 29-SEP-10 3LA9 1 JRNL TITLE REVDAT 1 12-MAY-10 3LA9 0 JRNL AUTH T.E.EDWARDS,I.PHAN,J.ABENDROTH,S.H.DIETERICH,A.MASOUDI, JRNL AUTH 2 W.GUO,S.N.HEWITT,A.KELLEY,D.LEIBLY,M.J.BRITTNACHER, JRNL AUTH 3 B.L.STAKER,S.I.MILLER,W.C.VAN VOORHIS,P.J.MYLER,L.J.STEWART JRNL TITL STRUCTURE OF A BURKHOLDERIA PSEUDOMALLEI TRIMERIC JRNL TITL 2 AUTOTRANSPORTER ADHESIN HEAD. JRNL REF PLOS ONE V. 5 12803 2010 JRNL REFN ESSN 1932-6203 JRNL PMID 20862217 JRNL DOI 10.1371/JOURNAL.PONE.0012803 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.22 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 8173 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.117 REMARK 3 R VALUE (WORKING SET) : 0.115 REMARK 3 FREE R VALUE : 0.154 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.600 REMARK 3 FREE R VALUE TEST SET COUNT : 377 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.05 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.10 REMARK 3 REFLECTION IN BIN (WORKING SET) : 569 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.08 REMARK 3 BIN R VALUE (WORKING SET) : 0.1030 REMARK 3 BIN FREE R VALUE SET COUNT : 19 REMARK 3 BIN FREE R VALUE : 0.1850 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1124 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 9 REMARK 3 SOLVENT ATOMS : 165 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 13.56 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 7.78 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.73000 REMARK 3 B22 (A**2) : 0.73000 REMARK 3 B33 (A**2) : -1.46000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.036 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.028 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.094 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.362 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.919 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1153 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1587 ; 1.142 ; 1.923 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 169 ; 5.924 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 38 ;38.471 ;26.053 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 137 ;10.110 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 2 ;29.368 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 198 ; 0.078 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 888 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 826 ; 0.540 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1316 ; 0.919 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 327 ; 1.236 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 269 ; 1.913 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TWIN DETAILS REMARK 3 NUMBER OF TWIN DOMAINS : 2 REMARK 3 TWIN DOMAIN : 1 REMARK 3 TWIN OPERATOR : H, K, L REMARK 3 TWIN FRACTION : 0.802 REMARK 3 TWIN DOMAIN : 2 REMARK 3 TWIN OPERATOR : K, H, -L REMARK 3 TWIN FRACTION : 0.198 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 3LA9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-JAN-10. REMARK 100 THE DEPOSITION ID IS D_1000057029. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-NOV-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944+ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8173 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 5.430 REMARK 200 R MERGE (I) : 0.02500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 53.7500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.62 REMARK 200 R MERGE FOR SHELL (I) : 0.03900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 31.00 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 29.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.74 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: ORIGINAL HIT: PACT B1, 0.1 M MIB REMARK 280 BUFFER PH 4.0, 25% PEG 1500; SOAKED INTO 0.1 M MIB BUFFER PH 4.0, REMARK 280 1.0 M KI, 35% PEG 1500 FOR 1 HOUR; CRYSTAL TRACKING ID 203140B1, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.39000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 14.65892 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 45.22000 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 25.39000 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 14.65892 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 45.22000 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 25.39000 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 14.65892 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 45.22000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 29.31785 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 90.44000 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 29.31785 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 90.44000 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 29.31785 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 90.44000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 22130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15400 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -137.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 -25.39000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 43.97677 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -50.78000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 I IOD A 188 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 224 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 301 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -20 REMARK 465 ALA A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 MET A -12 REMARK 465 GLY A -11 REMARK 465 THR A -10 REMARK 465 LEU A -9 REMARK 465 GLU A -8 REMARK 465 ALA A -7 REMARK 465 GLN A -6 REMARK 465 THR A -5 REMARK 465 GLN A -4 REMARK 465 GLY A -3 REMARK 465 PRO A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 SER A 3 REMARK 465 LEU A 4 REMARK 465 SER A 123 REMARK 465 VAL A 124 REMARK 465 GLY A 125 REMARK 465 GLY A 126 REMARK 465 LEU A 127 REMARK 465 THR A 128 REMARK 465 SER A 178 REMARK 465 ASN A 179 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 73 -5.43 75.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A 180 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A 181 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A 182 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A 183 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A 184 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A 185 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A 186 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A 187 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A 188 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3LAA RELATED DB: PDB REMARK 900 HIGH RESOLUTION NATIVE REMARK 900 RELATED ID: BUPSA.01663.A RELATED DB: TARGETDB DBREF 3LA9 A 2 179 UNP Q3JLD6 Q3JLD6_BURP1 2278 2455 SEQADV 3LA9 MET A -20 UNP Q3JLD6 EXPRESSION TAG SEQADV 3LA9 ALA A -19 UNP Q3JLD6 EXPRESSION TAG SEQADV 3LA9 HIS A -18 UNP Q3JLD6 EXPRESSION TAG SEQADV 3LA9 HIS A -17 UNP Q3JLD6 EXPRESSION TAG SEQADV 3LA9 HIS A -16 UNP Q3JLD6 EXPRESSION TAG SEQADV 3LA9 HIS A -15 UNP Q3JLD6 EXPRESSION TAG SEQADV 3LA9 HIS A -14 UNP Q3JLD6 EXPRESSION TAG SEQADV 3LA9 HIS A -13 UNP Q3JLD6 EXPRESSION TAG SEQADV 3LA9 MET A -12 UNP Q3JLD6 EXPRESSION TAG SEQADV 3LA9 GLY A -11 UNP Q3JLD6 EXPRESSION TAG SEQADV 3LA9 THR A -10 UNP Q3JLD6 EXPRESSION TAG SEQADV 3LA9 LEU A -9 UNP Q3JLD6 EXPRESSION TAG SEQADV 3LA9 GLU A -8 UNP Q3JLD6 EXPRESSION TAG SEQADV 3LA9 ALA A -7 UNP Q3JLD6 EXPRESSION TAG SEQADV 3LA9 GLN A -6 UNP Q3JLD6 EXPRESSION TAG SEQADV 3LA9 THR A -5 UNP Q3JLD6 EXPRESSION TAG SEQADV 3LA9 GLN A -4 UNP Q3JLD6 EXPRESSION TAG SEQADV 3LA9 GLY A -3 UNP Q3JLD6 EXPRESSION TAG SEQADV 3LA9 PRO A -2 UNP Q3JLD6 EXPRESSION TAG SEQADV 3LA9 GLY A -1 UNP Q3JLD6 EXPRESSION TAG SEQADV 3LA9 SER A 0 UNP Q3JLD6 EXPRESSION TAG SEQADV 3LA9 MET A 1 UNP Q3JLD6 INITIATING METHIONINE SEQRES 1 A 200 MET ALA HIS HIS HIS HIS HIS HIS MET GLY THR LEU GLU SEQRES 2 A 200 ALA GLN THR GLN GLY PRO GLY SER MET GLY SER LEU SER SEQRES 3 A 200 THR SER ILE SER SER ILE THR THR ASN THR THR ASN LEU SEQRES 4 A 200 GLY ASN SER THR ALA ALA ALA LEU GLY GLY GLY ALA THR SEQRES 5 A 200 TYR ASP PRO ALA THR GLY ALA ILE SER ALA PRO SER TYR SEQRES 6 A 200 THR THR TYR ASN ALA ASN GLY THR THR ALA THR ASN THR SEQRES 7 A 200 SER VAL GLY ALA ALA ILE ASP ASN ILE ASN ALA ASN GLY SEQRES 8 A 200 ILE LYS TYR PHE HIS ALA ASN SER THR ASP PRO ASP SER SEQRES 9 A 200 VAL ALA THR GLY THR ASN SER VAL ALA ILE GLY PRO ASN SEQRES 10 A 200 ALA VAL ALA ASN VAL ASP TYR SER VAL ALA ILE GLY SER SEQRES 11 A 200 GLY ALA THR THR SER ALA ALA VAL PRO VAL ALA SER ALA SEQRES 12 A 200 SER VAL GLY GLY LEU THR PHE GLY GLY PHE ALA GLY SER SEQRES 13 A 200 ALA PRO ILE GLY VAL PHE SER VAL GLY ALA PRO GLY ALA SEQRES 14 A 200 GLU ARG GLN ILE THR ASN VAL ALA ALA GLY ARG ILE SER SEQRES 15 A 200 ALA ALA SER THR ASP ALA VAL ASN GLY SER GLN LEU TYR SEQRES 16 A 200 ALA THR ASN SER ASN HET IOD A 180 1 HET IOD A 181 1 HET IOD A 182 1 HET IOD A 183 1 HET IOD A 184 1 HET IOD A 185 1 HET IOD A 186 1 HET IOD A 187 1 HET IOD A 188 1 HETNAM IOD IODIDE ION FORMUL 2 IOD 9(I 1-) FORMUL 11 HOH *165(H2 O) HELIX 1 1 SER A 5 GLY A 27 1 23 HELIX 2 2 SER A 58 GLY A 70 1 13 HELIX 3 3 ASN A 169 ASN A 177 1 9 SHEET 1 A 2 TYR A 44 TYR A 47 0 SHEET 2 A 2 THR A 53 ASN A 56 -1 O ASN A 56 N TYR A 44 SHEET 1 B 2 VAL A 84 ALA A 85 0 SHEET 2 B 2 VAL A 98 ALA A 99 1 O ALA A 99 N VAL A 84 SHEET 1 C 3 VAL A 91 ILE A 93 0 SHEET 2 C 3 VAL A 105 ILE A 107 1 O ALA A 106 N ILE A 93 SHEET 3 C 3 PHE A 141 SER A 142 1 O SER A 142 N VAL A 105 SITE 1 AC1 3 SER A 5 SER A 9 THR A 53 SITE 1 AC2 2 THR A 15 HOH A 255 SITE 1 AC3 3 ALA A 49 HOH A 251 HOH A 311 SITE 1 AC4 3 LYS A 72 ASP A 82 HOH A 284 SITE 1 AC5 2 ASN A 17 THR A 86 SITE 1 AC6 1 SER A 109 SITE 1 AC7 1 HOH A 290 SITE 1 AC8 1 ILE A 160 SITE 1 AC9 1 THR A 176 CRYST1 50.780 50.780 135.660 90.00 90.00 120.00 H 3 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019693 0.011370 0.000000 0.00000 SCALE2 0.000000 0.022739 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007371 0.00000